BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	501448 =	NA (NA)	4 (0.050)	4/164	NT	NA	noncoding (5/84 nt)	REP46 (repetitive extragenic palindromic) element; contains 2 REP sequences	REP46 (repetitive extragenic palindromic) element; contains 2 REP sequences
*	?	NC_000913	501478 =	NA (NA)	4 (0.050)	4/164	NT	NA	noncoding (35/84 nt)	REP46 (repetitive extragenic palindromic) element; contains 2 REP sequences	REP46 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 110 total aligned reads displayed.

GCTTGCCGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATG‑CGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCAACCACCGTTTACCCCGTCACCACC  >  NC_000913/501380‑501577

gCTTGCCGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTGACGCCGCATCTGGCAt                                                                                                     >  2:1312039/1‑100 (MQ=255)

gCTTGCCGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCAt                                                                                                     >  2:2197159/1‑100 (MQ=255)

   tGCCGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTg                                                                                                  >  1:667625/1‑100 (MQ=255)

   tGCCGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTg                                                                                                  <  1:2161399/100‑1 (MQ=255)

   tGCCGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACACCGCATCTGGCATTTg                                                                                                  <  2:31465/100‑1 (MQ=255)

    gCCGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTgg                                                                                                 >  1:602976/1‑100 (MQ=255)

    gCCGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTgg                                                                                                 >  2:1487765/1‑100 (MQ=255)

    gCCGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTgg                                                                                                 >  2:1552167/1‑100 (MQ=255)

    gCCGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTgg                                                                                                 <  2:2219143/100‑1 (MQ=255)

    aatatgaaaaatatgtaggcatgataagacgcgccagcgtcgcatcaggcatcgagagccaaatGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTgg                                                                                                 >  2:333491‑M1/65‑100 (MQ=255)

     ccGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGc                                                                                                <  1:160500/100‑1 (MQ=255)

     ccGGAGCGAGAAGACAGCCTGGAAGAGTATTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGc                                                                                                <  1:1030453/100‑1 (MQ=255)

     atatgaaaaatatgtaggcatgataagacgcgccagcgtcgcatcaggcatcgagagccaaatGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGc                                                                                                >  1:1786830‑M1/64‑100 (MQ=255)

       ggAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGctc                                                                                              <  1:969366/100‑1 (MQ=255)

         aGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCCCGCCGCATCTGGCATTTGGCtctc                                                                                            <  1:783128/100‑1 (MQ=255)

         aGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCtctc                                                                                            <  1:1149622/100‑1 (MQ=255)

          gCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCg                                                                                           >  2:192725/1‑100 (MQ=255)

          gCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCg                                                                                           <  2:147214/100‑1 (MQ=255)

           cGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGa                                                                                          >  2:826017/1‑100 (MQ=255)

            gTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGAt                                                                                         >  2:1752908/1‑100 (MQ=255)

             tGAAGACAGCCTGGCAGAGTCTTACTTGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCg                                                                                           <  2:558709/97‑1 (MQ=255)

             tGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATg                                                                                        >  2:1578654/1‑100 (MQ=255)

                aGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCt                                                                                     >  1:1478019/1‑100 (MQ=255)

                aGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCt                                                                                     >  1:1526560/1‑100 (MQ=255)

                 gACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTg                                                                                    >  2:1041504/1‑100 (MQ=255)

                   cAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGa                                                                                   >  1:842826/1‑99 (MQ=255)

                      ccTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATG‑Cg                                                                              >  1:1426883/1‑100 (MQ=255)

                       cTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATG‑CGa                                                                             >  2:2182782/1‑100 (MQ=255)

                       cTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATG‑CGa                                                                             >  2:1859776/1‑100 (MQ=255)

                        tGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATG‑CGAc                                                                            <  1:192725/100‑1 (MQ=255)

                          gAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATG‑CGACGc                                                                          >  2:1285412/1‑100 (MQ=255)

                           aaGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATG‑CGACGCt                                                                         >  1:1334308/1‑100 (MQ=255)

                             gagTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATG‑CGACGCTgg                                                                       >  1:174498/1‑100 (MQ=255)

                             gagTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATG‑CGACGCTgg                                                                       >  2:2180884/1‑100 (MQ=255)

                               gTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGTCTGATG‑CGACGCTGgcg                                                                     <  2:407410/100‑1 (MQ=255)

                               gTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATG‑CGACGCTGgcg                                                                     <  1:1973603/100‑1 (MQ=255)

                               gTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATG‑CGACGCTGgcg                                                                     <  2:2072909/100‑1 (MQ=255)

                               gTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATG‑CGACGCTGgcg                                                                     <  1:461550/100‑1 (MQ=255)

                                 cTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATG‑CGACGCTGGcgcg                                                                   >  2:1625763/1‑100 (MQ=255)

                                 cTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATG‑CGACGCTGGcgcg                                                                   <  2:667625/100‑1 (MQ=255)

                                 cTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATG‑CGACGCTGGcgcg                                                                   >  2:680964/1‑100 (MQ=255)

                                 cTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATG‑CGACGCTGGcgcg                                                                   >  1:931217/1‑100 (MQ=255)

                                    aCTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATG‑CGACGCTGGCGCGTCt                                                                >  2:1287033/1‑100 (MQ=255)

                                    aCTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATG‑CGACGCTGGCGCGTCt                                                                <  1:163187/100‑1 (MQ=255)

                                     cTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATG‑CGACGCTGGCGCGTCtt                                                               >  1:28406/1‑100 (MQ=255)

                                      tGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATG‑CGACGCTGGCGCGTCTTa                                                              <  1:464666/100‑1 (MQ=255)

                                       gggATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATG‑CGACGCTGGCGCGTCTTAt                                                             <  2:1426873/100‑1 (MQ=255)

                                        ggATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATG‑CGACGCTGGCGCGTCTTATc                                                            >  1:528331/1‑100 (MQ=255)

                                            cGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATG‑CGACGCTGGCGCGTCTTATCAt                                                          >  1:1546814/1‑98 (MQ=255)

                                             ttgaaGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCGTTTGGCGCTCGATGCCTGATG‑CGACGCTGGCGCGTCTTATc                                                            >  2:1563632/4‑95 (MQ=255)

                                             gTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATG‑CGACGCTGGCGCGTCTTATCATGcc                                                       >  2:1680403/1‑100 (MQ=255)

                                               tAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATG‑CGACGCTGGCGCGTCTTATCATGCCTa                                                     <  2:1675182/100‑1 (MQ=255)

                                                 aGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATG‑CGACGCTGGCGCGTCTTATCATGCCTACa                                                   <  1:968308/100‑1 (MQ=255)

                                                    tATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGATCTTGATGCCTGCTG‑CGAAGCTGGCGCGTCTTATTATGCCTAc                                                    >  1:1103326/1‑96 (MQ=21)

                                                      tcgtcgGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATG‑CGACGCTGGCGCGTCTTATCATGCCTACATAttt                                              <  1:1255084/100‑1 (MQ=255)

                                                      tcgtcgGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATG‑CGACGCTGGCGCGTCTTATCATGCCTACATAtt                                               >  1:1871670/1‑99 (MQ=255)

                                                       cgtcgGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATG‑CGACGCTGGCGCGTCTTATCATGCCTACATAtttt                                             <  1:1312045/100‑1 (MQ=255)

                                                         tcgGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTTGCTCTCAATGCCTGATG‑CGACGCTGGCGCGTCTTATCAGGCCTACatatccgcg                                           <  1:1031777/100‑6 (MQ=21)

                                                            gTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATG‑CGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCata                                        >  2:1524468/1‑100 (MQ=255)

                                                             gccaaatgccagatgcggcgtgaacgccttatctggcATTTGGCTCTCGATGCCTGATG‑CGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCatat                                       >  1:1786830‑M2/38‑100 (MQ=255)

                                                              tCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATG‑CGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATAtt                                      >  2:1878612/1‑100 (MQ=255)

                                                              tCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATG‑CGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATAtt                                      <  2:174498/100‑1 (MQ=255)

                                                              tCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATG‑CGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATAtt                                      <  1:1408002/100‑1 (MQ=255)

                                                              ccaaatgccagatgcggcgtgaacgccttatctggcATTTGGCTCTCGATGCCTGATG‑CGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATAtt                                      >  2:333491‑M2/37‑100 (MQ=255)

                                                               caaatgccagatgcggcgtgaacgccttatctggcATTTGGCTCTCGATGCCTGATG‑CGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATAttt                                     >  1:1730746‑M2/36‑100 (MQ=255)

                                                               cGTAGGCCAGATACGGCGTTCACGCCGCATATAGCATTTGGATCTCGACTCCTCCTGCCGAC‑CTGGCGCGTCTTATCATGATTATATATTtctcct                                         >  2:1859845/1‑94 (MQ=12)

                                                               cGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATG‑CGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATAttt                                     >  2:382085/1‑100 (MQ=255)

                                                                gTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATG‑CGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATAtttt                                    >  1:1988598/1‑100 (MQ=255)

                                                                gTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATG‑CGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATAtttt                                    >  1:1858268/1‑100 (MQ=255)

                                                                gTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATG‑CGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATAtttt                                    <  1:1027362/100‑1 (MQ=255)

                                                                 tAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGAGGCCTGATG‑CGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATATTTTa                                   >  2:1242190/1‑100 (MQ=255)

                                                                   ggCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATG‑CGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATATTTTACa                                 <  2:1507346/100‑1 (MQ=255)

                                                                    gccagatgcggcgtgaacgccttatctggcATTTGGCTCTCGATGCCTGATG‑CGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATATTTTACAt                                >  1:2112786‑M2/31‑100 (MQ=255)

                                                                    GCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATG‑CGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATATTTTACAt                                <  1:2148212‑M1/100‑1 (MQ=255)

                                                                     CCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATG‑CGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATATTTTACAt                                <  1:2064930‑M1/99‑1 (MQ=255)

                                                                     CCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATG‑CGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATATTTTACATc                               <  2:1052253‑M1/100‑1 (MQ=255)

                                                                          tAAGGCGGTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATG‑CGCCGCTGGCGCGTCTTAACATGCCAACAAATTTTATATATTTTACATACGACa                          >  1:553545/1‑100 (MQ=25)

                                                                           aaGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGGTGCCTGATG‑CGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATATTTTACATCCGTCaa                         >  2:1564747/1‑100 (MQ=255)

                                                                            aGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATG‑CGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCAac                        >  1:1905877/1‑100 (MQ=255)

                                                                             ggCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATG‑CGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCAacc                       <  1:1041506/100‑1 (MQ=255)

                                                                             ggCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATG‑CGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCAacc                       >  1:1328856/1‑100 (MQ=255)

                                                                             ggCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATG‑CGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCAacc                       >  1:2222301/1‑100 (MQ=255)

                                                                               cGTTCACGCCGCATCTGGCATTTGGCTCTCTATGCTTTATG‑CTACGCTGTCGCGTCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCAaccac                     <  2:2090213/100‑1 (MQ=25)

                                                                               cGTTCACGCCGCATCTGGCATTTGGCTCTCGATTCCTGATG‑CGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCAaccac                     >  1:1114095/1‑100 (MQ=255)

                                                                               cGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATG‑CGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCAaccac                     >  1:1275729/1‑100 (MQ=255)

                                                                               cGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATG‑CGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCAaccac                     <  2:528332/100‑1 (MQ=255)

                                                                                gTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATG‑CGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCAaccacc                    >  1:2186375/1‑100 (MQ=255)

                                                                                      gccgcATCTGGCATTTGGCTCTCGATGCCTGATG‑CGACGCTGGCGCGTCTTATCATGCCTACCTATTTTTCATATTTTACATCCGGCAACCACCGTTTAc              >  2:870875/1‑100 (MQ=255)

                                                                                          cATCTGGCATTTGGCTCTCGATGCCTGATG‑CGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCAACCACCGTTTACCCCg          <  2:385324/100‑1 (MQ=255)

                                                                                          cATCTGGCATTTGGCTCTCGATGCCTGATG‑CGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCAACCACCGTTTACCCCg          <  2:475137/100‑1 (MQ=255)

                                                                                           atctggcATTTGGCTCTCGATGCCTGATG‑CGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCAACCACCGTTTACCCCGt         <  1:1752919‑M2/93‑1 (MQ=255)

                                                                                            tctggcATTTGGCTCTCGATGCCTGATG‑CGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCAACCACCGTTTACCCCGTc        <  2:88469‑M2/94‑1 (MQ=255)

                                                                                             ctggcATTTGGCTCTCGATGCCTGATG‑CGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCAACCACCGTTTACCCCGTca       <  1:1878624‑M2/95‑1 (MQ=255)

                                                                                             ctggcATTTGGCTCTCGATGCCTGATG‑CGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCAACCACCGTTTACCCCGTca       <  1:1814136‑M2/95‑1 (MQ=255)

                                                                                             cTGGCATTTGGCTCTCGATGCCTGATG‑TGACGCTGGCGCTTCTTATCATGCCTACATATTTTTCTTATTTTACATCCGGGAACCACCGTTTACCCCGTc        <  2:1258122/99‑1 (MQ=38)

                                                                                              tggcATTTGGCTCTCGATTCCTGATG‑CGACGCTGGCGCGTCTTGTCATGCCTACATATTTTTCATATTTTACATCCGGCAACCACCGTTTACCCCGTcac      >  2:638718‑M2/5‑100 (MQ=255)

                                                                                              tggcATTTGGCTCTCGATGCCTGATG‑CGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCAACCACCGTTTACCCCGTcac      <  1:135498‑M2/96‑1 (MQ=255)

                                                                                              tgacATTTTGCTCTCTATGCCTGATG‑CGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCAACCACCGTTTAcc             <  1:743284‑M2/89‑1 (MQ=255)

                                                                                                  aTTTGGCTCTCGATGCCTGATG‑CGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCAACCACCGTTTACCCCGTCaccacc  >  1:847028/1‑100 (MQ=255)

                                                                                                  aTTTGGCTCTACATGCCTGATG‑CGACGCTGTTACGTCTTATCATTCCTACATATTTTTCATATTTTACATTCGGCAACTATCGTTTACCCCGTcaccac   <  2:555331/99‑1 (MQ=25)

GCTTGCCGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATG‑CGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATATTTTACATCCGGCAACCACCGTTTACCCCGTCACCACC  >  NC_000913/501380‑501577

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.