New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	526259 =	NA (NA)	6 (0.080)	4/168	NT	100%	coding (2999/4281 nt)	rhsD	Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor
	?	NC_000913	526275 =	0 (0.000)					coding (3015/4281 nt)	rhsD	Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor

CGAGCGGACCCACCACTACCACTACGACAGCCAGCACCGCCTGGTGTTCTACACGCGGATACAGCATGGCGAGCCACTGGTCGAGAGCCGCTACCTCTACGACCCGCTGGGACGGCGAATGGCAAAACGGGTCTGGCGGCGGGAGCGTGACCTGACGGGGTGGATGTCGCTGTCGCGTAAACCGGAGGTGACGTGGTAT  >  NC_000913/526176‑526374                                                                                                    |                                                                                                    gtttacgcgacagcgacatccaccccgtcaggtcacgctcccgccgccagacccgttttgccattcgccgtcccagcgggtcgtagaggtagcggctctc                                                                                                     >  1:503749‑M2/100‑100 (MQ=255) gtttacgcgacagcgacatccaccccgtcaggtcacgctcccgccgccagacccgttttgccattcgccgtcccagcgggtcgtagaggtagcggctctc                                                                                                     <  1:1086853‑M2/1‑1 (MQ=255)  tttacgcgacagcgacatccaccccgtcaggtcacgctcccgccgccagacccgttttgccattcgccgtcccagcgggtcgtagaggtagcggctctCg                                                                                                    >  2:241164‑M2/99‑100 (MQ=255)  tttacgcgacagcgacatccaccccgtcaggtcacgctcccgccgccagacccgttttgccattcgccgtcccagcgggtcgtagaggtagcggctctCg                                                                                                    <  2:1125008‑M2/2‑1 (MQ=255)  tttacgcgacagcgacatccaccccgtcaggtcacgctcccgccgccagacccgttttgccattcgccgtcccagcgggtcgtagaggtagcggctctCg                                                                                                    <  1:823290‑M2/2‑1 (MQ=255)   ttacgcgacagcgacatccaccccgtcaggtcacgctcccgccgccagacccgttttgccattcgccgtcccagcgggtcgtagaggtagcggctctCGa                                                                                                   <  2:937720‑M2/3‑1 (MQ=255)   ttacgcgacagcgacatccaccccgtcaggtcacgctcccgccgccagacccgttttgccattcgccgtcccagcgggtcgtagaggtagcggctctCGa                                                                                                   >  2:24356‑M2/98‑100 (MQ=255)    tacgcgacagcgacatccaccccgtcaggtcacgctcccgccgccagacccgttttgccattcgccgtcccagcgggtcgtagaggtagcggctctCGAc                                                                                                  >  2:1009657‑M2/97‑100 (MQ=255)    tacgcgacagcgacatccaccccgtcaggtcacgctcccgccgccagacccgttttgccattcgccgtcccagcgggtcgtagaggtagcggctctCGAc                                                                                                  >  2:2197380‑M2/97‑100 (MQ=255)    tacgcgacagcgacatccaccccgtcaggtcacgctcccgccgccagacccgttttgccattcgccgtcccagcgggtcgtagaggtagcggctctCGAc                                                                                                  >  1:1224182‑M2/97‑100 (MQ=255)    tacgcgacagcgacatccaccccgtcaggtcacgctcccgccgccagacccgttttgccattcgccgtcccagcgggtcgtagaggtagcggctctCGAc                                                                                                  >  1:1849879‑M2/97‑100 (MQ=255)     acgcgacagcgacatccaccccgtcaggtcacgctcccgccgccagtcccgttttgccattcgccgtcccagcgggtcgtagaggtagcggctctCGAcc                                                                                                 <  2:1164439‑M2/5‑1 (MQ=255)     acgcgacagcgacatccaccccgtcaggtcacgctcccgccgccagacccgttttgccattcgccgtcccagcgggtcgtagaggtagcggctctCGAcc                                                                                                 <  1:644417‑M2/5‑1 (MQ=255)     acgcgacagcgacatccaccccgtcaggtcacgctcccgccgccagacccgttttgccattcgccgtcccagcgggtcgtagaggtagcggctctCGAcc                                                                                                 <  1:1926532‑M2/5‑1 (MQ=255)     acgcgacagcgacatccaccccgtcaggtcacgctcccgccgccagacccgttttgccattcgccgtcccagcgggtcgtagaggtagcggctctCGAcc                                                                                                 <  2:234883‑M2/5‑1 (MQ=255)     acgcgacagcgacatccaccccgtcaggtcacgctcccgccgccagacccgttttgccattcgccgtcccagcgggtcgtagaggtagcggctctCGAcc                                                                                                 <  1:1994008‑M2/5‑1 (MQ=255)     acgcgacagcgacatccaccccgtcaggtcacgctcccgccgccagacccgttttgccattcgccgtcccagcgggtcgtagaggtagcggctctCGAcc                                                                                                 <  1:676820‑M2/5‑1 (MQ=255)     acccgacagccacatccccctcgtcaggtctcgctcccgccgccagacccgttttgccattcgccgtcccagcgggtcgtagaggtagcggctctCGa                                                                                                   <  2:2029474‑M2/3‑1 (MQ=255)                                                                             cgggtcgtagaggtagcggctctCGACCCGCTGGGACGGCGAATGGCAAAACGGGTCTGGCGGCGGGAGCGTGACCTGACGGGGTGGAtgtcgctgtcgc                         >  1:506891‑M2/24‑100 (MQ=255)                                                                             cgggtcgtagaggtagcggctctCGAACCGCTGGGACGGCGAATGGCAAAACGGGTCTGGCGGCGGGAGCGTGACCTGACGGGGTGGAtgtcgctgtcgc                         >  2:1316874‑M2/24‑100 (MQ=255)                                                                              gggtcgtagaggtagcggctctCGACCCGCTGGGACGGCGAATGGCAAAACGGGTCTGGCGGCGGGAGCGTGACCTGACGGGGTGGATGTCGCTGTcgcg                        >  2:1772748‑M2/23‑100 (MQ=255)                                                                              gggtcgtagaggtagcggctctCGACCCGCTGGGACGGCGAATGGCAAAACGGGTCTGGCGGCGGGAGCGTGACCTGACGGGGTGGATGTCGCTGTcgcg                        >  1:823585‑M2/23‑100 (MQ=255)                                                                               ggtcgtagaggtagcggctctCGACCCGCTGGGACGGCGAATGGCAAAACGGGTCTGGCGGCGGGAGCGTGACCTGACGGGGTGGATGTCGCTGTCGCGt                       >  1:949116‑M2/22‑100 (MQ=255)                                                                                   gtagaggtagcggctctCGACCCGCTGGGACGGCGAATGGCAAAACGGGTCTGGCGGCGGGAGCGTGACCTGACGGGGTGGATGTCGCTGTCGCGTAAAc                   >  2:433730‑M2/18‑100 (MQ=255)                                                                                                    CGACCCGCTGGGACGGCGAATGGCAAAACGGGTCTGGCGGCGGGAGCGTGACCTGACGGGGTGGATGTCGCTGTCGCGTAAACCGGAGGTGACGTGGTAt  <  2:1747249‑M2/100‑1 (MQ=255)                                                                                                    CGACCCGCTGGGACGGCGAATGGCAAAACGGGTCTGGCGGCGGGAGCGTGACCTGACGGGGTGGATGTCGCTGTCGCGTAAACCGGAGGTGACGTGGTAt  >  1:345808‑M2/1‑100 (MQ=255)                                                                                                    |                                                                                                    CGAGCGGACCCACCACTACCACTACGACAGCCAGCACCGCCTGGTGTTCTACACGCGGATACAGCATGGCGAGCCACTGGTCGAGAGCCGCTACCTCTACGACCCGCTGGGACGGCGAATGGCAAAACGGGTCTGGCGGCGGGAGCGTGACCTGACGGGGTGGATGTCGCTGTCGCGTAAACCGGAGGTGACGTGGTAT  >  NC_000913/526176‑526374

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.