New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 1357754 =NA (NA)8 (0.110) 3/160 NT NA intergenic (‑86/+48) ymjA/puuP DUF2543 family protein/putrescine importer
?NC_000913 1357793 = NA (NA)noncoding (24/30 nt) REP111 (repetitive extragenic palindromic) element; contains 1 REP sequences REP111 (repetitive extragenic palindromic) element; contains 1 REP sequences

AAGCATAAGGGCGGATGATAGCACTCGTGATCCGGGTCATACATCTTTTTATAGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCGTTCTGTCACCATCATACAACGGCACTTTGCGATAGCGGCGGATCAGATACCATAAATATGCGCCGCCTAA  >  NC_000913/1357694‑1357891
                                                                                                   |                                                                                                  
ttccgatctggCGGATGATAGCACTCGTGATCCGGGTCATACATCTTTTTATAGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCa                                                                                                    <  1:2112143/91‑1 (MQ=255)
 aGCATAAGGGCGGATGATAGCACTCGTGATCCGGGTCATACATCTTTTTATAGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCAt                                                                                                   >  1:1697846/1‑100 (MQ=255)
 aGCATAAGGGCGGATGATAGCACTCGTGATCCGGGTCATACATCTTTTTATAGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCACAt                                                                                                   >  2:251221/1‑100 (MQ=255)
  caaagtgccgttgtatgatggtgacagaacgccggtgagtgaaacgtaatagtcggatGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATc                                                                                                  >  1:1088746‑M1/59‑100 (MQ=255)
   cATAAGGGCGGATGATAGCACTCGTGATCCGGGTCATACATCTTTTTATAGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATcc                                                                                                 >  1:1968085/1‑100 (MQ=255)
   cATAAGGGCGGATGATAGCACTCGTGATCCGGGTCATACATCTTTTTATAGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATcc                                                                                                 >  1:1751175/1‑100 (MQ=255)
    aTAAGGGCGGATGATAGCACTCGTGATCCGGGTCATACATCTTTTTATAGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCg                                                                                                <  1:222482/100‑1 (MQ=255)
    aTAAGGGCGGATGATAGCACTCGTGATCCGGGTCATACATCTTTTTATAGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCg                                                                                                <  1:1970449/100‑1 (MQ=255)
      aaGGGCGGATGATAGCACTCGTGATCCGGGTCATACATCTTTTTATAGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGAc                                                                                              <  1:1288345/100‑1 (MQ=255)
        gggCGGATGATAGCACTCGTGATCCGGGTCATACATCTTTTTATAGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTa                                                                                            <  2:1402170/100‑1 (MQ=255)
        gggCGGATGATAGCACTCGTGATCCGGGTCATACATCTTTTTATAGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTa                                                                                            <  1:321848/100‑1 (MQ=255)
         ggCGGATGATAGCACTCGTGATCCGGGTCATACATCTTTTTATAGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCaagatcggaa                                                                                           >  2:2112129/1‑91 (MQ=255)
         ggCGGATGATAGCACTCGTGATCCGGGTCATACATCTTTTTATAGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTAt                                                                                           >  2:1678452/1‑100 (MQ=255)
               tgatAGCACTCGTGATCCGGGTCATACATCTTTTTATAGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGtt                                                                                     >  1:331643/1‑100 (MQ=255)
                gatAGCACTCGTGATCCGGGTCATACATCTTTTTATAGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGttt                                                                                    >  2:2205528/1‑100 (MQ=255)
                 atAGCACTCGTGATCCGGGTCATACATCTTTTTATAGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTtc                                                                                   <  2:1483250/100‑1 (MQ=255)
                  tAGCACTCGTGATCCGGGTCATACATCTTTTTATAGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGCTTATGCGTCGCGCCTCCGACTATTACGtttt                                                                                   <  2:184823/99‑2 (MQ=255)
                  tAGCACTCGTGATCCGGGTCATACATCTTTTTATAGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTtca                                                                                  >  1:1247143/1‑100 (MQ=255)
                  tAGCACTCGTGATCCGGGTCATACATCTTTTTATAGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTtca                                                                                  >  1:645699/1‑100 (MQ=255)
                   aGCACTCGTGATCCGGGTCATACATCTTTTTATAGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTtcac                                                                                 <  1:2114281/100‑1 (MQ=255)
                   aGCACTCGTGATCCGGGTCATACATCTTTTTATAGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTtcac                                                                                 <  2:1144482/100‑1 (MQ=255)
                   aGCACTCGTGATCCGGGTCATACATCTTTTTATAGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTtcac                                                                                 <  1:704577/100‑1 (MQ=255)
                   aGCACTCGTGATCCGGGTCATACATCTTTTTATAGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTtcac                                                                                 <  1:1393202/100‑1 (MQ=255)
                   aGCACTCGTGATCCAGGTCATACATCTTTTTATAGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTtcac                                                                                 <  2:1034628/100‑1 (MQ=255)
                        tCGTGATCCGGGTCATACATCTTTTTATAGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTTCACTCAcc                                                                            <  2:1241911/100‑1 (MQ=255)
                        tCGTGATCCGGGTCATACATCTTTTTATAGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTTCACTCAcc                                                                            <  1:283813/100‑1 (MQ=255)
                           tGATCCGGGTCATACATCTTTTTATAGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGc                                                                         <  1:1269085/100‑1 (MQ=255)
                            gATCCGGGTCATACATCTTTTTATAGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCCTCCGACTATTACGTTTCACTCACCg                                                                           >  2:1903201/1‑97 (MQ=255)
                            gATCCGGGTCATACATCTTTTTATAGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCg                                                                        <  2:2054509/100‑1 (MQ=255)
                            gATCCGGGTCATACATCTTTTTATAGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCg                                                                        <  2:1215024/100‑1 (MQ=255)
                             aTCCGGGTCATACATCTTTTTATAGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCGt                                                                       >  1:946516/1‑100 (MQ=255)
                              tCCGGGTCATACATCTTTTTATAGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCGtt                                                                      <  1:1042005/100‑1 (MQ=255)
                              tCCGGGTCATACATCTTTTTATAGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCGtt                                                                      >  2:983884/1‑100 (MQ=255)
                               ccGGGTCATACATCTTCTTATAGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCGTTc                                                                     <  2:502856/100‑1 (MQ=255)
                                 gggTCATACATCTTTTTATAGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCGTTCTg                                                                   <  1:1105294/100‑1 (MQ=255)
                                    tCATACATCTTTTTATAGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCGTTCTGTCa                                                                <  2:1406814/100‑1 (MQ=255)
                                     cATACATCTTTTTATAGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCGTTCTGTCAc                                                               <  1:574078/100‑1 (MQ=255)
                                      aTACATCTTTTTATAGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCGTTCTGTCatc                                                              <  1:1512100/100‑3 (MQ=255)
                                      aTACATCTTTTTATAGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCGTTCTGTCAcc                                                              <  1:1718186/100‑1 (MQ=255)
                                       tACATCTTTTTATAGTTAATGGCGCGGCGCGTTACCCTCAGTCAGGATAATGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCGTTCTGTCACca                                                             >  2:2192608/1‑100 (MQ=255)
                                        aCATCTTTTTATAGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGGTTCACTCACCGGCGTTCTGTCACcat                                                            >  1:1052579/1‑100 (MQ=255)
                                         cATCTTTTTATAGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCGTTCTGTCACcatc                                                           >  2:596517/1‑100 (MQ=255)
                                          aTCTTTTTATAGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCGTTCTGTCACcatca                                                          <  1:74012/100‑1 (MQ=255)
                                          aTCTTTTTATAGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCGTTCTGTCACcatca                                                          <  1:2146591/100‑1 (MQ=255)
                                                ttATAGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCGTTCTGTCACCATCATACAAc                                                    <  2:1529900/100‑1 (MQ=255)
                                                  ataGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCGTTCTGTCACCATCATACAACgg                                                  <  1:2001684/100‑1 (MQ=255)
                                                    aGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCGTTCTGTCACCATCATACAACGGc                                                 <  2:1029285/99‑1 (MQ=255)
                                                    aGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCGTTCTGTCACCATCATACAACGGCa                                                >  2:756563/1‑100 (MQ=255)
                                                     gTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCGTTCTGTCACCATCATACAACGGCAc                                               >  2:544897/1‑100 (MQ=255)
                                                         gatgcgcggcgcattatcctgcctgagggtaacgcgccgcgcATCCGACTATTACGTTTCACTCACCGGCGTTCTGTCACCATCATACAACGGCACTTTg                                           >  1:1088746‑M2/43‑100 (MQ=255)
                                                          tGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCGTTCTGTCACCATCATACAACGGCACTTTGc                                          <  2:1097999/100‑1 (MQ=255)
                                                          tGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCGTTCTGTCACCATCATACAACGGCACTTTGc                                          <  2:403537/100‑1 (MQ=255)
                                                          tGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCGTTCTGTCACCATCATACAACGGCACTTTGc                                          <  1:756563/100‑1 (MQ=255)
                                                           ggcgcggcgcGTTACCCTCAGGCAGGATAATGCGCCGGGCATCCGACTATTACGTTTCACTCACCGGCGTTCTGTCACCATCATACAACGGCACTTTGCg                                         >  2:1195344/1‑100 (MQ=255)
                                                           ggcgcggcgcGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCGTTCTGTCACCATCATACAACGGCACTTTGCg                                         >  2:1949800/1‑100 (MQ=255)
                                                           ggcgcggcgcGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCGTTCTGTCACCATCATACAACGGCACTTTGCg                                         <  1:942162/100‑1 (MQ=255)
                                                             CGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCGTTCTGTCACCATCATACAACGGCACTTTGCGAt                                       <  2:401223‑M1/100‑1 (MQ=255)
                                                              gcggcgcattatcctgcctgagggtaacgcgccgcgcATCCGACTATTACGTTTCACTCACCGGCGTTCTGTCACCATCATACAACGGCACTTTGCGATa                                      >  2:1156293‑M2/38‑100 (MQ=255)
                                                              gcggcgcattatcctgcctgagggtaacgcgccgcgcATCCGACTATTACGTTTCACTCACCGGCGTTCTGTCACCATCATACAACGGCACTTTGCGATa                                      >  2:167424‑M2/38‑100 (MQ=255)
                                                               cggcgcattatcctgcctgagggtaacgcgccgcgcATCCGACTATTACGTTTCACTCACCGGCGTTCTGTCACCATCATACAACGGCACTTTGCGATAg                                     >  1:1938304‑M2/37‑100 (MQ=255)
                                                               cggcgcattatcctgcctgagggtaacgcgccgcgcATCCGACTATTACGTTTCACTCACCGGCGTTCTGTCACCATCATACAACGGCACTTTGCGATAg                                     >  2:222141‑M2/37‑100 (MQ=255)
                                                               cggcgcattatcctgcctgagggtaacgcgccgcgcATCCGACTATTACGTTTCACTCACCGGCGTTCTGTCACCATCATACAACGGCACTTTGCGATAg                                     >  1:190341‑M2/37‑100 (MQ=255)
                                                               cggcgcattatcctgcctgagggtaacgcgccgcgcATCCGACTATTACGATTCACTCACCGGCGTTCTGTCACCATCATACAACGGCACTTTGCGATAg                                     >  1:1761060‑M2/37‑100 (MQ=255)
                                                               cggcgcattatcctgcctgagggaaacacgccgcgcATCCGACTCTTACGTTTCACTCACCGGCGTTCTGTCACCATCATACAACGGCACTTTACGATAg                                     >  2:2054844‑M2/37‑100 (MQ=255)
                                                                GGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCGTTCTGTCACCATCATACAACGGCACTTTGCGATAgc                                    >  2:733104‑M1/1‑100 (MQ=255)
                                                                    CGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCGTTCTGTCACCATCATACAACGGCACTTTGCGATAgcggcg                                >  2:1594407‑M1/1‑100 (MQ=255)
                                                                       tACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCGTTCTGTCACCATCATACAACGGCACTTTGCGATAGCGGCGGAt                             <  2:502045/100‑1 (MQ=255)
                                                                         cccTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCGTTCTGTCACCATCATACAACGGCACTTTGCGATAGCGGCGGATCa                           >  1:1450901/1‑100 (MQ=255)
                                                                          ccTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCGTTCTGTCACCATCATACAACGGCACTTTGCGATAGCGGCGGATCAg                          <  1:2245082/100‑1 (MQ=255)
                                                                          ccTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCGTTCTGTCACCATCATACAACGGCACTTTGCGATAGCGGCGGATCAg                          <  1:1732027/100‑1 (MQ=255)
                                                                          ccTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCGTTCTGTCACCATCATACAACGGCACTTTGCGATAGCGGCGGATCAg                          <  1:974914/100‑1 (MQ=255)
                                                                          ccTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCGTTCTGTCACCATCATACAACGGCACTTTGCGATAGCGGCGGATCAg                          <  2:105780/100‑1 (MQ=255)
                                                                          ccTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCGTTCTGTCACCATCATACAACGGCACTTTGCGATAGCGGCGGATCAg                          <  2:1426887/100‑1 (MQ=255)
                                                                          ccTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCGTTCTGTCACCATCATACAACGGCACTTTGCGATAGCGGCGGATCAg                          <  2:1384635/100‑1 (MQ=255)
                                                                          ccTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCGTTCTGTCACCATCATACAACGGCACTTTGCGATAGCGGCGGATCAg                          <  1:1924920/100‑1 (MQ=255)
                                                                           cTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCGTTCTGTCACCATCATACAACGGCACTTTGCGCTAGCGGCGGATc                            >  2:2220724/1‑97 (MQ=255)
                                                                           cTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCGTTCTGTCACCATCATACAACGGCACTTTGCGATAGCGGCGGATCAGa                         >  2:274193/1‑100 (MQ=255)
                                                                            tCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCGTTCTGTCACCATCATACAACGGCACTTTGCGATAGCGGCGGATCAGAt                        <  1:1113431/100‑1 (MQ=255)
                                                                             caggcaggATAATGCGCCGCGCATCCGACTATTAAGTTTCACTCACCGGCGTTCTGTCACAATCATACAACGGAAATTTGCGATAGCGGCGGATCAGCTa                       >  2:2062899/1‑100 (MQ=255)
                                                                              aggcaggATAATGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCGTTCTGTCACCATCATACAACGGCACTTTGCGATAGCGGCGGATCAGATAc                      <  1:2205543/100‑1 (MQ=255)
                                                                                        aTGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCGTTCTGTCACCATCATACAACGGCACTTTGCGATAGCGGCGGATCAGATACCATAAatat             >  1:175177/1‑99 (MQ=255)
                                                                                        aTGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCGTTCTGTCACCATCATACAACGGCACTTTGCGATAGCGGCGGATCAGATACCATAAATATg            >  1:1998445/1‑100 (MQ=255)
                                                                                         tGCGCCGCGCATCCGACTATTACGTTTCTCTCACCGGCGTTCTGTCACCATCATACAACGGCACTTTGCGATAGCGGCGGATCAGATACCATAAATATg            <  2:212933/99‑1 (MQ=255)
                                                                                           cgccgcgcATCCGACTATTACGTTTCACTCACCGGCGTTCTGTCACCATCATACAACGGCACTTTGCGATAGCGGCGGATCAGATACCATAAATATgcgc         >  1:408883‑M2/9‑100 (MQ=255)
                                                                                            gccgcgcCTCCGACTATTACGTTACACTCACCGGCGTTCTGTCACCATCATACAACGGCACTTTGCGATAGCGGCGGATCAGATACCATAAATATGcgcc        >  2:438103‑M2/8‑100 (MQ=255)
                                                                                               gcgcATCCGACTATTACGTTTCACTCACCGGCGTTCTGTCACCATCATACAACGGCACTTTGCGATAGCGGCGGATCAGATACCATAAATATGCgccgcc     >  1:2121844‑M2/5‑100 (MQ=255)
                                                                                               gcgcATCCGACTATTACGTTTCACTCACCGGCGTTCTGTCACCATCATACAACGGCACTTTGCGATAGCGGCGGATCAGATACCATAAATATGCgccgcc     <  1:1632093‑M2/96‑1 (MQ=255)
                                                                                                cgcATCCGACTATTACGTTTCACTCACCGGCGTTCTGTCACCATCATACAACGGCACTTTGCGATAGCGGCGGATCAGATACCATAAATATGCGCCGCCt    <  1:1903213‑M2/97‑1 (MQ=255)
                                                                                                 gcATCCGACTATTACGTTTCACTCACCGGCGTTCTGTCACCATCATACAACGGCACTTTGCGATAGCGGCGGATCAGATACCATAAATATGCGCCGCCTa   <  1:1156297‑M2/98‑1 (MQ=255)
                                                                                                  cATCCGACTATTACGTTTCACTCACCGGCGTTCTGTCACCATCATACAACGGCGCTTTGCGATAGCGGCGGATCAGATACCATAAATATGCGCCGCCTaa  <  1:1499620‑M2/99‑1 (MQ=255)
                                                                                                   |                                                                                                  
AAGCATAAGGGCGGATGATAGCACTCGTGATCCGGGTCATACATCTTTTTATAGTTAATGGCGCGGCGCGTTACCCTCAGGCAGGATAATGCGCCGCGCATCCGACTATTACGTTTCACTCACCGGCGTTCTGTCACCATCATACAACGGCACTTTGCGATAGCGGCGGATCAGATACCATAAATATGCGCCGCCTAA  >  NC_000913/1357694‑1357891

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.