| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,553,210 | A→G | 19.7% | K287E (AAA→GAA) | amiA → | N‑acetylmuramoyl‑l‑alanine amidase I |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,553,210 | 0 | A | G | 19.7% | 155.6 / 37.4 | 86 | K287E (AAA→GAA) | amiA | N‑acetylmuramoyl‑l‑alanine amidase I |
| Reads supporting (aligned to +/- strand): ref base A (32/37); new base G (11/6); total (43/43) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.79e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.52e-01 | |||||||||||
GTTAGGCACGGCGGCGTTTCGTCAGAAAATCGCCACAGCGATTGCTGAAGGCGTGATCAGTTATTTCCACTGGTTCGACAACCAGAAAGCACATTCGAAAAAGCGATAAGTTATGAAACCCGACGCACACCAGGTTAAACAGTTTCTGCTCAACCTTCAGGATACGATTTGTCAGCAGCTGACCGCCGTCGATGGC > NC_000913/2553113‑2553308 | gTTAGGCACGGCGGCGTTTCGTCAGAAAATCGCCACAGCGATTGCTGAAGGCGTGATCAGTTATTTACACTGGTTCGACAACCAGAAAGCACATTCGaaa > 2:547802/1‑100 (MQ=255) ttAGGCACGGCGGCGTTTCGTCAGAAAATCGCCACAGCGATTGCTGAAGGCGTGATCAGTTATTTCCACTGGTTCGACAACCAGAAAGCACATTCGaaaa < 2:802960/100‑1 (MQ=255) tAGGCACGGCGGCGTTTCGTCAGAAAATCGCCACAGCGATTGCTGAAGGCGTGATCAGTTATTTCCACTGGTTCGACAACCAGAAAGCACATTCGaaaaa > 1:1239682/1‑100 (MQ=255) ggCACGGCTGAGTTTTGTCATAAACTCGCGCCATAGATTGCTGATGGCGTGATCAGTTATTTACTCTGGTTCGACAACCAGAAAGCACATTCGAAAAAGc < 2:1913045/100‑1 (MQ=255) ggCACGGCGGCGTTTCGTCAGAAAATCGCCACAGCTATTGCTGAAGGCGTGATCAGTTATTTCCTCTGGTTTGACATCTAGAAAGCAAATTAGAAAAAGc < 2:242366/100‑1 (MQ=255) ggCACGGCGGCGTTTCGTCAGAAAATCGCCACAGCGATTGCTGAAGGCGTGATCAGTTATTTCCACTGGTTCGACAACCAGAAAGCACATTCGAAAAAg < 1:455655/99‑1 (MQ=255) ggCACGGCGGCGTTTCGTCAGAAAATCGCCACAGCGATTGCTGAAGGCGTGATCAGTTATTTCCACTGGTTCGACAACCAGAAAGCACATTCGAAAAAGc > 1:473349/1‑100 (MQ=255) ggCACGGCGGCGTTTCGTCAGAAAATCGCCACAGCGATTGCTGAAGGCGTGATCAGTTATTTCCACTGGTTCGACAACCAGAAAGCACATTCGAAAAAGc > 1:1096263/1‑100 (MQ=255) gCACGGCGGCGTTTCGTCAGAAAATCGCCACAGCGATTGCTGAAGGCGTGATCAGTTATTTCCACTGGTTCGACAACCAGAAAGCACATTCGAAAAAGCg > 1:2166915/1‑100 (MQ=255) catggcggcGTTTCGTCAGAAAATCGCCACAGCGATTGCTGAAGGCGTGATCAGTTATTTCCACTGGTTCGCCAACCAGAAAGCACATTCGAAAAAGc < 1:1363555/95‑1 (MQ=255) ggcggcGTTTCGTCAGAAAATCGCCACAGCGATTGCTGAAGGCGTGATCAGTTATTTCCACTGGTTCGACAACCAGAAAGCACATTCGAAAAAGCGATaa > 1:872306/1‑100 (MQ=255) cggcgTTTCGTCAGAAAATCGCCACAGCGATTGCTGAAGGCGTGATCAGTTATTTCCACTGGTTCGACAACCAGAAAGCACATTCGAAAAAGCGATAAGt < 1:180180/100‑1 (MQ=255) gcgTTTCGTCAGAAAATCGCCACAGCGATTGCTGAAGGCGTGATCAGTTATTTCCACTGGTTCTACAACCAGAAATCACATTCGGAAAAGCGATAAGTTa < 2:1753038/100‑1 (MQ=255) cGTCAGAAAATCGCCACAGCGATTGCTGAAGGCGTGATCAGTTATTTCCACTGGTTCGACAACCAGAAAGCACATTCGAAAACGCGATAAGTTATGAAAc > 1:1941556/1‑100 (MQ=255) tCATAAAATCGCCACATCGATTGCGGAAGGCGTGATCAGTTATTTCCACTTTTTCGACAACCAGAAAGCACATTCGATAAAGCGATAAGTTATGAAAcc < 2:1926117/99‑1 (MQ=255) tCAGAAAATCGCCACAGCGATTGCTGAAGGCGTGATCAGTTATTTCCACTGGTTCGACAACCAGAAAGCACATTCGAAAAAGCGATAAGTTATGAAAccc > 2:705622/1‑100 (MQ=255) cAGAAAATCGCCACAGCGATTGCTGAAGGCGTGATCAGTTATTTCCACTGGTTCGACAACCAGAAAGCACATTCGGAAAAGCGATAAGTTATGAAAcac > 1:184990/1‑97 (MQ=255) gAAAATCGCCACAGCGATTGCTGAAGGCGTGATCAGTTATTTCCACTGGTTCGACAACCAGAAAGCACATTCGAAAAAGCGATAAGTTATGAAACCCGAc > 1:1665226/1‑100 (MQ=255) gAAAATCGCCACAGCGATTGCTGAAGGCGTGATCAGTTATTTCCACTGGTTCGACAACCAGAAAGCACATTCGAAAAAGCGATAAGTTATGAAACCCGAc < 2:935901/100‑1 (MQ=255) aaaaTCGCCACAGCGATTGCTGAAGGCGTGATCAGTTATTTCCACTGGTTCGACAACCAGAAAGCACATTCGAAAAAGCGATAAGTTATGAAACCCGACg < 2:480737/100‑1 (MQ=255) aaaTCGCCACAGCGATTGCTGAAGGCGTGATCAGTTATTTCCACTGGTTCGACAACCAGAAAGCACATTCGAAAACGCGATAAGTTATGAAACCCGACGc > 2:488547/1‑100 (MQ=255) tCGCCACAGCGATTTCTGAAGCCTTGCTCAGTTAGTGCCACTCGTTCGACCACCATAAAGCACATCCGAAAAAGCGCTAAGTTATCAAACCCGAcaca < 2:937610/98‑1 (MQ=255) cGCCACAGCGATTGCTGAAGGCGTGATCAGTTATTTCCACTGGTTCGACAACCAGAAAGCACATTCGAAAAAGCGATAAGTTATGAAACCCGACGCacac < 1:1704642/100‑1 (MQ=255) gCCACAGCGATTGCTGAAGGCGTGATCAGTTATTTCCACTGGTTCGACAACCAGAAAGCACATTCGAAAAAGCGATAAGTTATGAAACCCGACGCACAcc > 1:576802/1‑100 (MQ=255) gCCACAGCGATTGCTGAAGGCGTGATCAGTTATTTCCACTGGTTCGACAACCAGAAAGCACATTCGAAAAAGCGATAAGTTATCAAACCCGACGCACAcc > 2:846359/1‑100 (MQ=255) ccACAGCGATTGCTGAAGGCGTGATCAGTTATTTCCACTGGTTCGACAACCAGAAAGCACATTCGAAAAAGCGATAAGTTATGAAACCCGACGCACACCa > 2:1492492/1‑100 (MQ=255) cGATTGCTGAAGGCGTGATCAGTTATTTCCACTGGTTCGACAACCAGAAAGCACATTCGAAAAAGCGATAAGTTATGAAACCCGACGCACACCAGGTTaa < 2:2166900/100‑1 (MQ=255) cGATTGCTGAAGGCGTGATCAGTTATTTCCACTGGTTCGACAACCAGAAAGCACATTCGAAAAAGCGATAAGTTATGAAACCCGACGCACACCAGGTTaa < 1:1334142/100‑1 (MQ=255) cGATTGCTGAAGGCGTGATCAGTTATTTCCACTGGTTCGACAACCAGAAAGCACATTCGAAAAAGCGATAAGTTATGAAACCCGACGCACACCAGGTTaa < 1:1764826/100‑1 (MQ=255) ttGCTGAAGGCGTGATCAGTTATTTCCACTGGTTCGACAACCAGAAAGCACATTCGGAAAAGCGATAAGTTATGAAACCCGACGCACACCAGGTTAAACa < 1:1545366/100‑1 (MQ=255) ttGCTGAAGGCGTGATCAGTTATTTCCACTGGTTCGACAACCAGAAAGCACATTCGAAAAAGCGATAAGTTATGAAACCCGACGCACACCAGGTTAAACa < 1:1729497/100‑1 (MQ=255) gCTGAAGGCGTGATCAGTTATTTCCACTGGTTCGACAACCAGAAAGCACATTCGAAAAAGCGATAAGTTATGAAACCCGACGCACACCAGGTTAAACAg > 1:1247488/1‑99 (MQ=255) gAAGGCGTGGTCAGTTATTTCCACTGGTTCGTCAACCAGAAATCACGTTCGAAAAGGCGGTAAGGTAGGAAACCCGACGCACAGGAGGTTAAGCAGTTTc > 1:2134552/1‑100 (MQ=255) gAAGGCGTGATCAGTTATTTCCACTGGTTCGACAACCAGAAAGCACATTCGGAAAAGCGATAAGTTATGAAACCCGACGCACACAAGGTTAAACAGTTTc > 2:509911/1‑100 (MQ=255) gAAGGCGTGATCAGTTATTTCCACTGGTTCGACAACCAGAAAGCACATTCGAAAAAGCGATAAGTTATGAAACCCGACGCACACCAGGTTAAACAGTTTc < 1:1045539/100‑1 (MQ=255) aaGGCGTGATCAGTTATTTCCACTGGTTCGACAACCAGAAAGCACATTCGAAAAAGCGATAAGTTATGAAACCCGACGCACACCAGGTTAAACAGTTTCt < 1:1091714/100‑1 (MQ=255) ggCGTGATCAGTTATTTCCACTGGTTCGACAACCAGAAAGCACATTCGAAAAAGCGATAAGTTATGAAACCCGACGCACACCAGGTTAAACAGTTTCTGc > 2:42796/1‑100 (MQ=255) gCGTGATCAGTTATTTCCACTGGTTCGACAACCAGAAAGCACATTCGAAAAAGCGATAAGTTATGAAACCCGACGCACACCAGGTTAAACAGTTTCTGCt < 1:813956/100‑1 (MQ=255) cGTGATCAGTTATTTCCACTGGTTCGACAACCAGAAAGCACATTCGAAAAAGCGATAAGTTATGAAACCCGACGCACACCAGGTTAAACAGTTTCTGCTc > 2:111845/1‑100 (MQ=255) cGTGATCAGTTATTTCCACTGGTTCGACAACCAGAAAGCACATTCGAAAAAGCGATAAGTTATGAAACCCGACGCACACCAGGTTAAACAGTTTCTGCTc > 1:1377551/1‑100 (MQ=255) gATCAGTTATTTCCACTGGTTCGACAACCAGAAAGCACATTCGGAAAAGCGATAAGTTATGAAACCCGACGCACACCAGGTTAAACAGTTTCTGCTCAAc > 1:469296/1‑100 (MQ=255) gATCAGTTATTTCCACTGGTTCGACAACCAGAAAGCACATTCGAAAAAGCGATAAGTTATGAAACCCGACGCACACCAGGTTAAACAGTTTCTGCTc > 2:1401946/1‑97 (MQ=255) tCAGTGATTTCCACTGGTTCGACAACCAGTAAGCATATTCGAAAAAGCGATAAGTGATGAAACACGACGCACTCCAGGTTAAACAGTTTCTGc < 2:1727463/93‑1 (MQ=255) gTTATTTCCACTGGTTCAACAACCAGAAAGCACATTCGGAAAAGCGATAAGTTATAAAACACGACGCACACCAGGTTAAACAGTTTCTGCTCAACCTTCa > 2:911814/1‑100 (MQ=255) tATTTCCACTGGTTCGACAACCAGAAAGCACATTCGAAAAAGCGATAAGTTATGAAACCCGACGCACACCAGGTTAAACAGTTTCTGCTCAACCTTCAgg < 1:1785352/100‑1 (MQ=255) aTTTCCACTGGTTCGACAACTAGAAAGCACATTCGAAAAAGCGATAAGTTAGGAAACCCGACGCACACCAGGTTAAACAGTTTCTGCTCAACCTTCAGGa < 1:439100/100‑1 (MQ=255) aTTTCCACTGGTTCGACAACCAGAAAGCACATTCGGAAAAGCGATAAGTTATGAAACCCGACGCACACCAGGTTAAACAGTTTCTGCTCAACCTTCAGGa < 1:1002157/100‑1 (MQ=255) aTTTCCACTGGTTCGACAACCAGAAAGCACATTCGAAAAAGCGATAAGTTATGAAACCCGACGCACACCAGGTTAAACAGTTTCTGCTCAACCTTCAGGa > 2:1785340/1‑100 (MQ=255) aTTTCCACTGGTTCGACAACCAGAAAGCACATTCGAAAAAGCGATAAGTTATGAAACCCGACGCACACCAGGTTAAACAGTTTCTGCTCAACCTTCAGGa < 2:1604430/100‑1 (MQ=255) aTTTCCACTGGTTCGACAACCAGAAAGCACATTCGAAAAAGCGATAAGTTATGAAACCCGACGCACACCAGGTTAAACAGTTTCTCCTCAACCTTCAg > 1:2141636/1‑98 (MQ=255) ttCCACTGGTTCGACAACCAGAAAGCACATTCGGAAAAGCGATAAGTTATGAAACCCGACGCACACCAGGTTAAACAGTTTCTGCTCAACCTTCAGGATa > 2:688944/1‑100 (MQ=255) ttCCACTGGTTCGACAACCAGAAAGCACATTCGGAAAAGCGATAAGTTATGAAACCCGACGCACACCAGGTTAAACAGTTTCTGCTCAACCTTCAGGATa > 2:388459/1‑100 (MQ=255) ttCCACTGGTTCGACAACCAGAAAGCACATTCGAAAAAGCGATAAGTTATGAAACCCGACGCACACCAGGTTAAACAGTTTCTGCTCAACCTTCAGGATa < 2:1257536/100‑1 (MQ=255) cACTGGTTCGACAACCAGAAAGCACATTCGGAAAAGCGATAAGTTATGAAACCCGACGCACACCAGGTTAAACAGTTTCTGCTCAACCTTCAGGATACGa > 1:971608/1‑100 (MQ=255) cACTGGTTCGACAACCAAAAAGCACATTCGAAAAAGCGATAAGTTATGAAACCCGACGCACACCAGGTTAAACAGTTTCTGCTCAACCTTCAGTATACGa > 2:454535/1‑100 (MQ=255) cTGGTTCGACAACCAGAAAGCACATTCGGAAAAGCGATAAGTTATGAAACCCGACGCACACCAGGTTAAACAGTTTCTGCTCAACCTTCAGGATACGAtt > 2:959941/1‑100 (MQ=255) ggTTCGACAACCAGAAAGCACATTCGGAAAAGCGATAAGTTATGAAACCCGACGCACACCAGGTTAAACAGTTTCTGCTCAACCTTCAGGATACGATTTg > 1:292202/1‑100 (MQ=255) gTTCGACAACCAGAAAGCACATTCGGAAAAGCGATAAGTTATGAAACCCGACGCACACCAGGTTAAACAGTTTCTGCTCAACCTTCAGGATACGATTTGt < 1:1777472/100‑1 (MQ=255) ttCGACAACCTGAAAGCACATTCGAAAAAGCGATAAGTTATGAAACCCGACGCACACCAGGTTAAATAGTTTCTGCTCAACCTTCAGGATACGATTTGTc < 2:1474001/100‑1 (MQ=255) ttCGACAACCAGAAAGCACATTCGGAAAAGCGATAAGTTATGAAACCCGACGCACACCAGGTTAAACAGTTTCTGCTCAACCTTCAGGATACGATTTGTc < 2:1914556/100‑1 (MQ=255) ttCGACAACCAGAAAGCACATTCGAAAAAGCGATAAGTTATGAAACCCGACGCACACCAGGTTAAACAGTTTCTGCTCAACCTTCAGGATACGATTTGTc < 1:1063903/100‑1 (MQ=255) ttCGACAACCAGAAAGCACATTCGAAAAAGCGATAAGTTATGAAACCCGACGCACACCAGGTTAAACAGTTTCTGCTCAACCTTCAGGATACGATTTGTc < 1:804670/100‑1 (MQ=255) tCGACAACCAGAAAGCACATTCGAAAAAGCGATAAGTTATGAAACCCGACGCACACCAGGTTAAACAGTTTCTGCTCAACCTTCAGGATACGATTTGTca < 1:1500609/100‑1 (MQ=255) cGACAACCAGAAAGCACATTCGGAAAAGCGATAAGTTATGAAACCCGACGCACACCAGCTTAAACAGTTTCTGCTCAACCTTCAGGATACGATTTGTcag < 2:1223387/100‑1 (MQ=255) cGACAACCAGAAAGCACATTCGAAAAATCGATAAGTTATGAAACCCGACGCACACCAGGTTAAACAGTTTCTGCTCAACCTTCAGGATACGATTTGTc < 2:2163193/98‑1 (MQ=255) gACAACCAGAAAGCACATTCGAAAAAGCGATAAGTTATGAAACCCGACGCACACCAGGTTAAACAGTTTCTGCTCAACCTTCAGGATACGATTTGTcagc > 1:977583/1‑100 (MQ=255) cAACCAGAAAGCACATTCGAAAAAGCGATAAGTTATGAAACCCGACGCACACCGGGTTAAACAGTTTCTGCTCAACCTTCAGGATACGATTTGTcagcag < 2:962304/100‑1 (MQ=255) cAACCAGAAAGCACATTCGAAAAAGCGATAAGTTATGAAACCCGACGCACACCAGGTTAAACAGTTTCTGCTCAACCTTCAGGATACGATTTGTcagcag > 1:778636/1‑100 (MQ=255) cAACCAGAAAGCACATTCGAAAAAGCGATAAGTTATGAAACCCGACGCACACCAGGTTAAACAGTTTCTGCTCAACCTTCAGGATACGATTTGTcagcag > 2:29195/1‑100 (MQ=255) cAACCAGAAAGCACATTCGAAAAAGCGATAAGTTATGAAACCCGACGCACACCAGGTTAAACAGTTTCTGCTCAACCTTCAGGATACGATTTGTcagcag > 1:986375/1‑100 (MQ=255) aaCCAGAAAGCACATTCGAAATAGCGATAAGTTATGAAAACCGACGCACACCAGGTTAAACAGTTTCTGCTCAACTTTCAGGATACTATTTGTcagc < 2:1546415/97‑1 (MQ=255) aCCAGAAAGCACATTCGGAAAAGCGATAAGTTATGAAACCCGACGCACACCAGGTTAAACAGTTTCTGCTCAACCTTCAGGATACGATTTGTCAGCAGCt > 1:356689/1‑100 (MQ=255) aCCAGAAAGCACATTCGGAAAAGCGATAAGTTATGAAACCCGACGCACACCAGGTTAAACAGTTTCTGCTCAACCTTCAGGATACGATTTGTCAGCAGCt > 1:2061693/1‑100 (MQ=255) aCCAGAAAGCACATTCGAAAAAGCGATAAGTTATGAAACCCGACGCACACCAGGTTAAACAGTTTCTGCTCAACCTTCAGGATACGATTTGTCAGCAGCt < 2:1496702/100‑1 (MQ=255) ccAGAAAGCACATTCGAAAAAGCGATAAGTTATGAAACCCGACGCACACCAGGTTAAACAGTTTCTGCTCAACCTTCAGGATACGATTTGTCAGCAGCt > 2:711070/1‑99 (MQ=255) ccAGAAAGCACATTCGAAAAAGCGATAAGTTATGAAACCCGACGCACACCAGGTTAAACAGTTTCTGCTCAACCTTCAGGATACGATTTGTCAGCAGCTg > 1:2184095/1‑100 (MQ=255) ccAGAAAGCACAATCGAAAAAGCGTTAAGTTATGAAACCCGATGCACACCAGGTTAAACTGTTTCTGCTCAACCTTCAGTATACTATTTGTCAgctgct < 2:1721785/99‑1 (MQ=255) caaaaaGCACATTCGAAAAAGCGATAAGTTATGAAACCCGACGCACACCAGGTTAAACAGTTTCTGCTCAACCTTCAGGATACGATTTGTCAGCAGCTGa < 2:2141621/97‑1 (MQ=255) gAAAGCACATTCGAAAAAGCGATAAGTTATGGAACCCCACGCACACCAGGTTAAACAGTTTCTGCTCAACCTTCAGGATACGATTTGTCAGCAGCTGAcc < 2:1516261/100‑1 (MQ=255) aaaGCACATTCGAAAAAGCGATAAGTTATGAAACCCGACGCACACCAGGTTAAACAGTTTCTGCTCAACCTTCAGGATACGATTTGTCAGCAGCTGAccg < 2:1049249/100‑1 (MQ=255) gCACATTCGAAAAAGCGATAAGTTATGAAACCCGACGCACACCAGGTTAAACAGTTTCTGCTCAACCTTCAGGATACGATTTGTCAGCAGCTGAccgccg > 1:631316/1‑100 (MQ=255) gCACATTCGAAAAAGCGAAAAGATATGAAACCCGACGCACACCAGGTTAAACAGTTTCTGCTCAACCTTCAGGATACGATTTGTCACCAGCTGAccgc > 2:1908332/1‑98 (MQ=255) cacaTTCGAAAAAGCGATAAGTTATGAAACCCGACGCACACCAGGTTAAACAGTTTCTCCTCAACCTTCAGGATACGATTTGTCAGCTGCTGAcaaatcg < 1:1565674/100‑7 (MQ=255) caTTCGAAAAAGCGATAAGTTATGACACCCGACGCACACCAGGTTAAACAGTTTCTGCTCAACCTTCAGGATACGATTTGTCAGCAGCTGACCGCCGTc < 2:1007025/99‑1 (MQ=255) aTTCGAAAAAGCGATAAGTTATGAAACCCGACGCACACCAGGTTAAACAGTTTCTGCTCAACCTTCAGGATACGATTTGTCAGCAGCTGACCGCCGTCGa > 2:46336/1‑100 (MQ=255) tCGAAAAAGCGATAAGTTATGAAACCCGACGCACACCAGGTTAAACAGTTTCTGCTCAACCTTCAGGATACGATTTGTCAGCAGCTGACCGCCGTCGATg < 2:1946592/100‑1 (MQ=255) cGAAAAAGCGATAAGTTATGAAACCCGACGCACACCAGGTTAAACAGTTTCTGCTCAACCTTCAGGATACGATTTGTCAGCAACTGACCGCCGTCGATgg > 2:981846/1‑100 (MQ=255) gAAAAAGCGATAAGTTATGAAACCCGACGCACACCAGGTTAAACAGTTTCTGCTCAACCTTCAGGATACGATTTGTCAGCAGCTGACCGCCGTCGATGgc > 2:167577/1‑100 (MQ=255) gAAAAAGCGATAAGTTATGAAACCCGACGCACACCAGGTTAAACAGTTTCTGCTCAACCTTCAGGATACGATTTGTCAGCAGCTGACCGCCGTCGATGgc > 2:1415460/1‑100 (MQ=255) | GTTAGGCACGGCGGCGTTTCGTCAGAAAATCGCCACAGCGATTGCTGAAGGCGTGATCAGTTATTTCCACTGGTTCGACAACCAGAAAGCACATTCGAAAAAGCGATAAGTTATGAAACCCGACGCACACCAGGTTAAACAGTTTCTGCTCAACCTTCAGGATACGATTTGTCAGCAGCTGACCGCCGTCGATGGC > NC_000913/2553113‑2553308 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |