Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_000913	3,352,673	T→C	100%	E118G (GAA→GGA)	arcB ←	aerobic respiration control sensor histidine protein kinase, cognate to two‑component response regulators ArcA and RssB

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,352,673	0	T	C	100.0%	317.1 / ‑6.7	98	E118G (GAA→GGA)	arcB	aerobic respiration control sensor histidine protein kinase, cognate to two‑component response regulators ArcA and RssB
Reads supporting (aligned to +/- strand):  ref base T (1/0);  new base C (49/47);  total (51/47)

GCTGAATTTGTGTCTCTTCGCGCTCTTTGATTTCAATTTTCAGTTGGCCGAAGGTTTCCTGCAGTTCTGCTTCCGCTTTTTCACGAACGGCAATTTCCTGATTTAGCTGGGCAATATTATCTTTTAACTGAACGTTGAGGCTCAAATCGCGCTCGCGCATCTCCTCCAGTTTTTGCACCAGCCGTGACAGAC  >  NC_000913/3352578‑3352769                                                                                                |                                                                                                 gCTGAATTTGTGTCTCTTCGCGCTCTTTGATTTCAATTTTCAGTTGGCCGAAGGTTTCCTGCAGTTCTGCTTCCGCTTTTTCACGAACGGCAATTCCCTg                                                                                              >  1:1559554/1‑100 (MQ=255)  cTGAATTTGTGTCTCTTCGCGCTCTTTGATTTCAATTTTCAGTTGGCCGAAGGTTTCCTGCAGTTCTGCTTCCGCTTTTTCACGAACGGCAATTCCCTGa                                                                                             >  2:2234447/1‑100 (MQ=255)   tGAATTTGTGTCTCTTCGCGCTCTTTGATTTCAATTTTCAGTTGGCCGAAGGTTTCCTGCAGTTCTGCTTCCGCTTTTTCACGAACGGCAATTCCCTGAt                                                                                            >  1:531271/1‑100 (MQ=255)   tGAATTTGTGTCTCTTCGCGCTCTTTGATTTCAATTTTCAGTTGGCCGAAGGTTTCCTGCAGTTCTGCTTCCGCTTTTTCACGAACGGCAATTCCCTGAt                                                                                            <  1:2072920/100‑1 (MQ=255)     aaTTTGTGTCTCTTCGCGCTCTTTGATTTCAATTTTCAGTTGGCCGAAGGTTTCCTGCAGTTCTGCTTCCGCTTTTTCACGAACGGCAATTCCCTGAttt                                                                                          <  1:1647893/100‑1 (MQ=255)      aTTTGTGTCTGTTCGCGCTCTTTGATTTCAATTTTCAGTTGGCCGAAGGTTTCCTGCAGTTCTGCTTCCTCTTTTTCACGAACGGCAATTCCCTGATTTa                                                                                         <  2:1474721/100‑1 (MQ=255)      aTTTGTGTCTCTTCGCGCTCTTTGATTTCAATTTTCAGTTGGCCGAAGGTTTCCTGCAGTTCTGCTTCCGCTTTTTCACGAACGGCAATTCCCTGATTTa                                                                                         >  2:99423/1‑100 (MQ=255)      aTTTGTGTCTCTTCGCGCTCTTTGATTTCAATTTTCAGTTGGCCGAAGGTTTCCTGCAGTTCTGCTTCCGCTTTTTCACGAACGGCAATTCCCTGATTTa                                                                                         >  1:541589/1‑100 (MQ=255)      aTTTGTGTCTCTTCGCGCTCTATGATTTAAATTTTCAGTTGGCCGAAGGTTTCCTGCAGTTCTGCTTCCGCTTTTTCACGAACGGCAATTCCCTGATTTa                                                                                         >  2:1405183/1‑100 (MQ=255)        ttGTGTCTCTTCGCGCTCTTTGATTTCAATTTTCAGTTGGCCGAAGGTTTCCTGCAGTTCTGCTTCCGCTTTTTCACGAACGGCAATTCCCTGATTTAGc                                                                                       >  1:391790/1‑100 (MQ=255)        ttGTGTCTCTTCGCGCTCTTTGATTTCAATTTTCAGTTGGCCGAAGGTTTCCTGCAGTTCTGCTTCCGCTTTTTCACGAACGGCAATTCCCTGATTTAGc                                                                                       <  1:1683094/100‑1 (MQ=255)          gtgtCTCTTCGCGCTCTTTGATTTCAATTTTCAGTTGGCCGAAGGTTTCCTGCAGTTCTGCTTCCGCTTTTTCACGAACGGCAATTCCCTGATTTAGCTg                                                                                     >  2:1439905/1‑100 (MQ=255)          gtgtCTCTTCGCGCACTTTGATTTCAATATTACGTTGGCCGCAGGATTCATGCAGTTATACTTCCGCTTTTTCACAAACCGCAATGCCCTGACTTacc                                                                                       >  2:1755874/1‑96 (MQ=255)           tgtCTCTTCGCGCTCTTTGATTTCAATTTTCAGTTGGCCGAAGGTTTCCTGCAGTTCTGCTTCCGCTTTTTCACGAACGGCAATTCCCTGATTTAGCTgg                                                                                    <  2:2012377/100‑1 (MQ=255)           tgtCTCTTCGCGCTCTTTGATTTCAATTTTCAGTTGGCCGAAGGTTTCCTGCAGTTCTGCTTCCGCTTTTTCACGAACGGCAATTCCCTGATTTAGCTgg                                                                                    >  1:835881/1‑100 (MQ=255)            ntcgctTCTCTCTCTTTGGTTTTGATTTTCAGTTTCCTGATGGTTCCCTGCAATTCTGCTTCCGCTTTTTCACGAACCGAAATTACCTGACTTacaag                                                                                     >  2:2100582/5‑94 (MQ=255)            gtCTCTTCGCGCTCTTTGATTTCAATTTTCAGTTGGCCGAAGGTTTCCTGCAGTTCTGCTTCCGCTTTTTCACGAACGGCAATTCCCTGATTTAGCTggg                                                                                   <  1:1652711/100‑1 (MQ=255)            gtCTCTTCGCGCTCTTTGATTTCAATTTTCAGTTGGCCGAAGGTTTCCTGCAGTTCTGCTTCCGCTTTTTCACGAACGGCAATTCCCTGATTTAGCTggg                                                                                   <  2:1561527/100‑1 (MQ=255)               tctTCGCGCTCTTTGATTTCAATTTTCAGTTGGCCGAAGGTTTCCTGCAGTTCTGCTTCCGCTTTTTCACGAACGGCAATTCCCTGATTTATCTGGGCaa                                                                                >  1:391020/1‑100 (MQ=255)                ctTCGCGCTCTTTGATTTCAATTTTCAGTTGGCCGAAGGTTTCCTGCAGTTCTGCTTCCGCTTTTTCACGAACGGCAATTTCCTGCTTTAGCTGGGCaa                                                                                >  2:654923/1‑99 (MQ=255)                ctTCGCGCTCTTTGATTTCAATTTTCAGGTGGCCGAAGGTTTCCTGCAGTTCTGCTTCCGCTTTTTCACTAACGGCAATTCCCTGATTTAGCTGGGCAat                                                                               <  2:1890755/100‑1 (MQ=255)                  tCGCGCTCTTTGATTTCAATTTTCAGTTGGCCGAAGGTTTCCTGCAGTTCTGCTTCCGCTTTTTCACGAACGGCAATTCCCTGATTTAGCTGGGCAatat                                                                             >  1:659669/1‑100 (MQ=255)                     cgcTCTTTGATTTCAATTTTCAGTTCGCCGAAGGTTGCCTGCAGTTCTGCTTCCACTTGTTCACGAATGTCAATTCCCTGATTTAGCTGGGCAatat                                                                             <  2:131486/97‑1 (MQ=255)                     cgcTCTCTGATTTCAATTTTCAGTTCACCGAAGGTTTCCTGCAGTTCTGCATCCGCTTTTTCACGACCGGCAATTCCCTGACTTAGCTCGGCAatat                                                                             >  2:2160541/1‑97 (MQ=255)                      gcTCTTTGATTTCCATTTTCAGTTGGCCTAAGGTTTCCTGCAGTTCTGCTTCCGCTTTTTCACGAACGGCTATTCCCTGATTTAGCTGGGCAATATTATc                                                                         <  2:1302661/100‑1 (MQ=255)                         ctTTGATTTCAATTTTCAGTTGGCCGAAGGTTTCCTGCAGTTCTGCTTCCGCTTTTTCACGAACGGCAATTCCCTGCTTTAGCTGGGCAATATTATCttt                                                                      >  1:353407/1‑100 (MQ=255)                         ctTTGATTTCAATTTTCAGTTGGCCGAAGGTTTCCTGCAGTTCTGCTTCCGCTTTTTCACGAACGGCAATTCCCTGATTTAGCTGGGCAATATTATCttt                                                                      >  2:501305/1‑100 (MQ=255)                         ctTTGATTTCAATTTTCAGTTGGCCGAAGGATTCCTGCAGTTCTGCTTCCGCTTTTTCACGAACGTCAATTCCATGATTTAGCTGCGCAATATTATCt                                                                        >  2:1990959/1‑98 (MQ=255)                          tttGATTTCAATTTTCAGTTGGCCGAAGGTTTCCTGCAGTTCTGCTTCCGCTTTTTCACGAACGGCAATTCCCTGATTTAGCTGGGCAATATTATCtttt                                                                     >  1:1750484/1‑100 (MQ=255)                          tttGATTTCAATTTTCAGTTGGCCGAAGGTTTCCTGCAGTTCTGCTTCCGCTTTTTCACGAACGGCAATTCCCTGATTTAGCTGGGCAATATTATCtttt                                                                     <  1:238501/100‑1 (MQ=255)                           ttGATTTCAATTTTCAGTTGGCCGAAGGTTTCCTGCAGTTCTGCTTCCGCTTTTTCACGAACGGCAATTCCCTGATTTAGCTGGGCAATATTATCTTTTa                                                                    >  1:1044618/1‑100 (MQ=255)                           ttGATTTCAATTTTCAGTTGGCCGAAGGTTTCCTGCAGTTCTGCTTCCGCTTTTTCACGAACGGCAATTCCCTGATTTAGCTGGGCAATATTATCTTTTa                                                                    <  1:372878/100‑1 (MQ=255)                             gATTTCAATTTTCAGTTGGCCGAAGGTTTCCTGCAGTTCTGCTTCCGCTTTTTCACGAACGGCAATTCCCTGATTTAGCTGGGCAATATTATCTTTTAAc                                                                  >  1:1562796/1‑100 (MQ=255)                             gATTTCAATTTTCAGTTGGCCGAAGGTTTCCTGCAGTTCTGCTTCCGCTTTTTCACGAACGGCAATTCCCTGATTTAGCTGGGCAATATTATCTTTTAAc                                                                  <  2:1242688/100‑1 (MQ=255)                              aTTTCAATTTTCAGTTGGCCGAAGGTTTCCTTCAGTTCTGCTTCCGCTTTTTCACGAACGGCAATTCCCTGATTTAGCTGGGCAATATTATCTTTTAACt                                                                 <  2:371667/100‑1 (MQ=255)                              aTTTCAATTTTCAGTTGGCCGAAGGTTTCCTGCAGTTCTGCTTCCGCTTTTTCACGAACGGCAATTCCCTGATTTAGCTGGGCAATATTATCTTTTAACt                                                                 <  1:1651418/100‑1 (MQ=255)                               tttCAATTTTCAGTTGGCCGAAGGTTTCCTGCAGTTCTGCTTCCGCTTTTTCACGAACGGCAATTCCCTGATTTAGCTGGGCAATATTATCTTTTAACt                                                                 >  1:138154/1‑99 (MQ=255)                               tttCAATTTTCAGTTGGCCGAAGGTTTCCTGCAGTTCTGCTTCCGCTTTTTCACGAACGGCAATTCCCTGATTTAGCTGGGCAATATTATCTTTTAACt                                                                 <  2:1863986/99‑1 (MQ=255)                               tttCAATTTTCAGTTGGCCGAAGGTTTCCTGCAGTTCTGCTTCCGCTTTTTCACGAACGGCAATTCCCTGATTTAGCTGGGCAATATTATCTTTTAACt                                                                 >  1:1932429/1‑99 (MQ=255)                                ttCAATTTTCAGTTGGCCGAAGGTTTCCTGCAGTTCTGCTTCCGCTTTTTCACGAACGGCAATTCCCTGATTTAGCTGGGCAATATTATCTTTTAACTGa                                                               <  1:2181219/100‑1 (MQ=255)                                 tCAATTTTCAGTTGGCCGAAGGTTTCCTGCAGTTCTGCTTCCGCTTTTTCACGAACGGCAATTCCCTGATTTAGCTGGGCAATATTATCTTTTAACTGaa                                                              <  1:818928/100‑1 (MQ=255)                                         cAGTTGGCCGAAGGTTTCCTGCAGTTCTGCTTCCGCTTTTTCACGAACGGCAATTCCCTGATTTAGCTGGGCAATATTATCTTTTAACTGAACGTTGAgg                                                      <  1:243839/100‑1 (MQ=255)                                          aGTTGGCCGAAGGTTTCCTGCAGTTCTGCTTCCGCTTTTTCACGAACGGCAATTCCCTGATTTAGCTGGGCAATATTATCTTTTAACTGAACGTTGAGGc                                                     <  2:42905/100‑1 (MQ=255)                                          aGTTGGCCGAAGGTTTCCTGCAGTTCTGCTGCCGCTTTTTCACGAACGGCAATTCCCTGATTTAGCTGGGCAATATTATCTTTTAACTGAACGTTGAGGc                                                     <  1:1690310/100‑1 (MQ=255)                                           gTTGGCCGAAGGTTTCCTGCAGTTCTGCTTCCGCTTTTTCACGAACGGCAATTCCCTGATTTAGCTGGGCAATATTATCTTTTAACTGAACGTTGAGGc                                                     <  2:581937/99‑1 (MQ=255)                                             tGGCCGAAGGTTTCCTGCAGTTCTGCTTCCGCTTTTTCACGAACGGCAATTCCCTGATTTAGCTGGGCAATATTATCTTTTAACTGAACGTTGAGGCTCa                                                  <  2:468071/100‑1 (MQ=255)                                             tGGCCGAAGGTTTCCTGCAGTTCTGCTTCCGCTTTTTCACGAACGGCAATTCCCTGATTTAGCTGGGCAATATTATCTTTTAACTGAACGTTGAGGATCa                                                  >  2:92663/1‑100 (MQ=255)                                               gCCGAAGGTTTCCTGCAGTTCTGCTTCCGCTTTTTCACGAACGGCAATTCCCTGATTTAGCTGGGCAATATTATCTTTTAACTGAACGTTGAGGCTCaaa                                                >  1:564958/1‑100 (MQ=255)                                                ccGAAGGTTTCCTGCAGTTCTGCTTCCGCTTTTTCACGAACGGCAATTCCCTGATTTAGCTGGGCAATATTATCTTTTAACTGAACGTTGAGGCTCAAAt                                               >  1:1951007/1‑100 (MQ=255)                                                ccGAAGGTTTCCTGCAGTTCTGCAACAGCTTTTTCACGAACGGCAATCCCCTGATTTAGCTTTGCAATATTATCTTTTAACTGAACGTTGAAGCTCaa                                                 >  2:725965/1‑98 (MQ=255)                                                 cGAAGGTTTCCTGCAGTTCTGCTACCGCTTTTTCACGAACGGCAATTCCCTGATTTAGCTGGGAAATATTATCTTTTAACTGAACGTTGAGGCTaaaa                                                >  2:117128/1‑98 (MQ=255)                                                  gAAGGTTTCCTGCAGTTCTGCTTCCGCTTTTTCACGAACGGCAATTCCCTGATTTAGCTGGGCAATATTATCTTTTAACTGAACGTTGAGGCTCAAAtcg                                             <  2:827626/100‑1 (MQ=255)                                                  gAAGGTTTCCTGCAGTTCTGCTTCCGCTTTTTCACGAACGGCAATTCCCTGATTTAGCTGGGCAATATTATCTTTTAACTGAACGTTGAGGCTCAAAtcg                                             <  2:1430453/100‑1 (MQ=255)                                                    aGGTTTCCTGCAGTTCTGCTTCCGCTTTTTCTCGAACGGCAATTCCCTGATTTAGCTGGGCAATATTATCTTTTATCTGAACGTTGAGGCTCAAAtcgcg                                           <  2:45518/100‑1 (MQ=255)                                                       tttCCTGCAGTTCTGCTTCCGCTTTTTCACGAACGGCAATTCCCTGATTTAGCTGGGCAATATTATCTTTTAACTGAACGTTGAGGCTCAAAtcgcgctc                                        <  2:2028192/100‑1 (MQ=255)                                                        ttCCTGCAGTTCTGCTTCCGCTTTTTCACGAATGTCAATTCCCTGATTTAGCTGGGCAATATTATCTTTTAACTGAACGTTGAGGCTCAAAtcgcgctcg                                       >  2:1172093/1‑100 (MQ=255)                                                        ttCCTGCAGTTCTGCTTCCGCTTTTTCACGAACGGCAATTCCCTGATTTAGCTGGGCAATATTATCTTTTAACTGAACGTTGAGGCTCAAAtcgcgctcg                                       >  1:1058866/1‑100 (MQ=255)                                                          ccTGCAGTTCTGCTTCCGCTTTTTCACGAACGGCAATTCCCTGATTTAGCTGGGCAATATTATCTTTTAACTGAACGTTGAGGCTCAAAtcgcgctcgcg                                     >  1:566206/1‑100 (MQ=255)                                                           cTGCAGTTCTGCTTCCGCTTTTTCACGAACGGCAATTCCCTGATTTAGCTGGGCAATATTATCTTTTAACTGAACGTTGAGGCTCAAAtcgcgctcgcgc                                    <  1:1018466/100‑1 (MQ=255)                                                           cTGCAGTTCTGCTTCCGCTTTTTCACGAACGGCAATTCCCTGATTTAGCTGGGCAATATTATCTTTTAACTGAACGTTGAGGCTCAAAtcgcgctcgc                                      >  1:878554/1‑98 (MQ=255)                                                           cTGCAGTTCTGCTTCCGCTTTTTCACGAACGGCAAATCCCTGATTTAGCTGGGCAATATTATCTTTTAACTGAACGTTGATGCTCAAAtcgcgctc                                        >  2:613449/1‑96 (MQ=255)                                                            tGCAGTTCTGCTTCCGCTTTTTCACGAACGGCAATTCCCTGATTTAGCTGGGCAATATTATCTTTTAACTGAACGTTGAGGCTCAAATCGCGCTCGCGCa                                   <  1:1368514/100‑1 (MQ=255)                                                             gCAGTTCTGCTTCCGCTTTTTCACGAACGGCAATTCCCTGATTTAGCTGGGCAATATTATCTTTTAACTGAACGTTGAGGCTCAAAtcgcgctagcgc                                    >  1:1432418/1‑98 (MQ=255)                                                             gCAGTTCTGCTTCCGCTTTTTCACGAACGGCAATTCCCTGATTTAGCTGGGCAATATTATCTTTTAACTGAACGTTGAGGCTCAAATCGCGCTCGCGCAt                                  >  1:602430/1‑100 (MQ=255)                                                             gCAGTTCTGCTTCCGCTTTTTCACGAACGGCAATTCCCTGATTTAGCTGGGCAATATTATCTTTTAACTGAACGTTGAGGCTCAAATCGCGCTCGCGCAt                                  >  2:1125256/1‑100 (MQ=255)                                                             gCAGTTCTGCTTCCGCTTTTTCACGAACGGCAATTCCCTGATTTAGCTGGGCAATATTATCTTTTAACTGAACGTTGAGGCTCAAATCGCGCTCGCGCAt                                  >  1:537533/1‑100 (MQ=255)                                                               aGTTCTGCTTCCGCTTTTTCACGAACGGCAATTCCCTGATTTAGCTGGGCAATATTATCTTTTAACTGAACGTTGAGGCTCAAATCGCGCTCGCGCAtct                                <  1:1739561/100‑1 (MQ=255)                                                                 ttCTGCTTCCGCTTTTTCACGAATGGCAATTCCCTGATTTAGCTGGGCAATATTATCTTTTAACTGAACGTTGAGGCTCAAATCGCGCTCGCGCATctcc                              <  2:1436437/100‑1 (MQ=255)                                                                 ttCTGCTTCCGCTTTTTCACGAACGGCAATTCCCTGATTTAGCTGGGCAATATTATCTTTTAACTGAACGTTGAGGCTCAAATCGCGCTCGCGCATctcc                              <  1:1527281/100‑1 (MQ=255)                                                                    tGCTTCCGCTTTTTCACGAACGGCAATTCCCTGATTTAGCTGGGCAATATTATCTTTTAACTGAACGTTGAGGCTCAAATCGCGCTCGCGCATCtcctcc                           <  2:2139094/100‑1 (MQ=255)                                                                    tGCTTCCGCTTTTTCACGAACGGCAATTCCCTGATTTAGCTGGGCAATATTATCTTTTAACTGAACGTTGAGGCTCAAATCGCGCTCGCGCATCtcctcc                           <  1:2221393/100‑1 (MQ=255)                                                                     gCTTCCGCTTTTTCACGAACGGCAATTCCCTGATTTAGCTGGGCAATATTATCTTTTAACTGAACGTTGAGGCTCAAATCGCGCTCGCGCATCTCCTCCa                          <  1:1172097/100‑1 (MQ=255)                                                                          ngCTTTTTCACGAACGGCAATTCCCTGATTTAGCTGGGCAATATTATCTTTTAACTGAACGTTGAGGCTCAAATCGCGCTCGCGCATCTCCTCCAGtttt                     >  2:143777/2‑100 (MQ=255)                                                                          cGCTTTTTCACGAACGGCAATTCCCTGATTTAGCTGGGCAATATTATCTTTTAACTGAACGTTGAGGCTCAAATCGCGCTCGCGCATCTCCTCCAGtttt                     >  1:1203178/1‑100 (MQ=255)                                                                           gCTTTTTCACGAACGGCAATTCCCTGATTTAGCTGGGCAATATTATCTTTTAACTGAACGTTGAGGCTCAAATCGCGCTCGCGCATCTCCTCCAGttttt                    <  1:903553/100‑1 (MQ=255)                                                                           gCTTTTTCACGAACGGCAATTCCCTGATTTAGCTGGGCAATATTATCTTTTAACTGAACGTTGAGGCTCAAATCGCGCTCGCGCATCTCCTCCAGttttt                    <  1:501304/100‑1 (MQ=255)                                                                           gCTTTTTCACGAACGGCAATTCCCTGATTTAGCTGGGCAATATTATCTTTTAACTGAACGTTGAGGCTCAAATCGCGCTCGCGCATCTCCTCCAGgttt                     >  2:876738/1‑99 (MQ=255)                                                                            cTTTTTCACGAACGGCAATTCCCTGATTTTGTTGGGCAATATTATCTTTTAACTGAACGTTGAGGCTCAAATCGCGCTCGCGCATCTCCTCCAGTTTTTg                   <  2:1227770/100‑1 (MQ=255)                                                                            cTTTTTCACGAACGGCAATTCCCTGATTTAGCTGGGCAATATTATCTTTTAGCTGAACGTTGAGGCTTAAATCGCGCTCGCGCATCTCATCCAGTTTTTg                   <  2:696354/100‑1 (MQ=255)                                                                            cTTTTTCACGAACGGCAATTCCCTGATTTAGCTGGGCAATATTATCTTTTAACTGAACGTTGAGGCTCAAATCGCGCTCGCGCATCTCCTCCAGttttt                    <  1:1413331/99‑1 (MQ=255)                                                                            cTTTTTCACGAACGGCAATTCCCTGATTTAGCTAGGCAATATTATCTTTTAACTGAACGTTGAGGCTCAAATCGCGCTCGCGCATCTCCTCCAGttttt                    >  2:909883/1‑99 (MQ=255)                                                                              ttttCACGAACGGCAATTCCCTGATTTAGCTGGGCAATATTATCTTTTAACTGAACGTTGAGGCTCAAATCGCGCTCGCGCATCTCCTCCAGTTTTTGCa                 <  2:1155382/100‑1 (MQ=255)                                                                               tttCACGAACGGCAATTCCCTGATTTAGCTGGGCAATATTATCTTTTAACTGAACGTTGAGGCTCAAATCGCGCTCGCGCATCTCCTCCAGTTTTTGc                  >  2:1626054/1‑98 (MQ=255)                                                                               tttCACGAACGGCAATTCCCTGATTTAGCTGGGCAATATTATCTTTTAACTGAACGTTGAGGCTCAAATCGCGCTCGCGCATCTCCTCCAGTTTTTGCAc                >  1:1432929/1‑100 (MQ=255)                                                                               tttCACGAACGGCAATTCCCTGATTTAGCTGGGCAATATTATCTTTTAACTGAACGTTGAGGCTCAAATCGCGCTCGCGCATCTCCTCCAGTTTTTGCAc                <  1:1973992/100‑1 (MQ=255)                                                                               tttCACGAACGGCAATTCCCTGATTTAGCTGGGCAATATTATCTTTTAACTGAACGTTGAGGCTCAAATCGCGCTCGCGCATCTCCTCCAGTTTTTGCAc                >  1:549818/1‑100 (MQ=255)                                                                               ttccgatctcGGCAATTCCCTGATTTAGCTGGGCAATATTATCTTTTAACTGAACGTTGAGGCTCAAATCGCGCTCGCGCATCTCCTCCAGTTTTTGCAc                <  1:630044/91‑1 (MQ=255)                                                                                  taCGAACGGCAATTCCCTGATTTAGCTGGGCAATATTATCTTTTAACTGAACGTTGAGGCTCAAATCGCGCTCGCGCATCTCCTCCAGTTTTTGCACCAg             <  2:74077/99‑1 (MQ=255)                                                                                  cACGAACGGCAATTCCCTGATTTAGCTGGGCAATATTATCTTTTAACTGAACGTTGAGGCTCAAATCGCGCTCGCGCATCTCCTCCAGTTTTTGCACCa              >  2:2234059/1‑99 (MQ=255)                                                                                   aCGAACGGCAATTCCCTGATTTAGCTGGGCAATATTATCTTTTAACTGAACGTTGAGGCTCAAATCGCGCTCGCGCATCTCCTCCAGttttttt                  >  2:1426012/1‑92 (MQ=255)                                                                                   aCGAACGGCAATTCCCTGATTTAGCTGGGCAATATTATCTTTTAACTGAACGTTGAGGCTCAAATCGCGCTCGCGCATCTCCTCCAGTTTTTGCACCAga            >  1:74077/1‑99 (MQ=255)                                                                                   aCGAACGGCAATTCCCTGATTTAGCTGGGCAATATTATCTTTTAACTGAACGTTGAGGCTCAAATCGCGCTCGCGCATCTCCTCCAGTTTTTGCACCAGc            >  1:543302/1‑100 (MQ=255)                                                                                    cGAACGGCAATTCCCTGATTTAGCTGGGCAATATTATCTTTTAACTGAACGTTGAGGCTCAAATCGCGCTCGCGCATCTCCTCCAGTTTTTGCACCAGc            <  2:1987996/99‑1 (MQ=255)                                                                                       aCGGCAATTCCCTGATTTAGCTGGGCAATATTATCTTTTAACTGAACGTTGAGGCTCAAATCGCGCTCGCGCATCTCCTCCAGTTTTTGCACCAGCCGt         >  1:2075400/1‑99 (MQ=255)                                                                                        cGGCAATTCCCTGATTTAGCTGGGCAATATTATCTTTTAACTGAACGTTGAGGCTCAAATCGCGCTCGCGCATCTCCTCCAGTTTTTGCAcagatcggaa       >  2:630044/1‑91 (MQ=255)                                                                                        cGGCAATTCCCTGATTTAGCTGGGCAATATTATCTTTTAACTGAACGTTGAGGCTCAAATCGCGCTCGCGCATCTCCTCCAGTTTTTGCACCAGCCGTGa       <  2:1031703/100‑1 (MQ=255)                                                                                           cAATTCCCTGATTTAGCTGGGCAATATTATCTTTTAACTGAACGTTGAGGCTCAAATCGCGCTCGCGCATCTCCTCCAGTTTTTGCACCAGCCGTGACAg    <  1:949579/100‑1 (MQ=255)                                                                                             aTTCCCTGATTTAGCTGGGCAATATTATCTTTTAACTGAACGTTGAGGCTCAAATCGCGCTCGCGCATCTCCTCCAGTTTTTGCACCAGCCGTGACAGAc  >  2:608276/1‑100 (MQ=255)                                                                                                |                                                                                                 GCTGAATTTGTGTCTCTTCGCGCTCTTTGATTTCAATTTTCAGTTGGCCGAAGGTTTCCTGCAGTTCTGCTTCCGCTTTTTCACGAACGGCAATTTCCTGATTTAGCTGGGCAATATTATCTTTTAACTGAACGTTGAGGCTCAAATCGCGCTCGCGCATCTCCTCCAGTTTTTGCACCAGCCGTGACAGAC  >  NC_000913/3352578‑3352769

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑