BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_000913	3,396,689	G→A	33.5%	S369S (AGC→AGT)	rng ←	ribonuclease G

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,396,689	0	G	A	33.5%	115.3 / 80.3	99	S369S (AGC→AGT)	rng	ribonuclease G
Reads supporting (aligned to +/- strand): ref base G (29/36); new base A (17/16); total (46/53)
Fisher's exact test for biased strand distribution p-value = 5.30e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.11e-01

Only 100 of 101 total aligned reads displayed.

CACAGTACGTGCTCAATGCTTTCGCGGGTGCGTTTACGCGTCATCTCCACCAGCCCCAGCGCCGAAAAACCATTAACGCTGGTTTTCACCCGGTCTTTGCTCAACGCCTGCTCCAGCGAGTGCAGCACTCGGCGGCGGTGATCTTCATTATTCATATCGATGAAATCAATAATGATAATCCCGCCCAGATTACGCAAC  >  NC_000913/3396591‑3396788

cacaGTACGTGCTCAATGCTTTCGCGGGTGCGTTTACGCGTCATCTCCACCAGCCCCAGCGCCGAAAAACCATTAACGCTGGTTTTCACCCGGTCTTTGc                                                                                                    <  1:1282039/100‑1 (MQ=255)

cacaGTACGTGCTCAATGCTTTCGCGGGTGCGTTTACGCGTCATCTCCACCAGCCCCAGCGCCGAAAAACCATTAACGCTGGTTTTCACCCGGTCTTTGc                                                                                                    <  1:1254092/100‑1 (MQ=255)

cacaGTACGTGCTCAATGCTTTCGCGGGTGCGTTTACGCGTCATCTCCACCAGCCCCAGCGCCGAAAAACCATTAACGCTGGTTTTCACCCGGTCTTTGc                                                                                                    >  2:42388/1‑100 (MQ=255)

 acaGTACGTGCTCAATGCTTTCGCGGGTGCGTTTACGCGTCATCTCCACCAGCCCCAGCGCCGAAAAACCATTAACGCTGGTTTTCACCCGGTCTTTGCt                                                                                                   >  2:58437/1‑100 (MQ=255)

 acaGTACGTGCTCAATGCTTTCGCGGGTGCGTTTACGCGTCATCTCCACCAGCCCCAGCGCCGAAAAACCATTAACGCTGGTTTTCACCCGGTCTTTGCt                                                                                                   >  1:1851180/1‑100 (MQ=255)

  caGTACGTGCTCAATGCTTTCGCGGGTGCGTTTACGCGTCATCTCCACCAGCCCCAGCGCCGAAAAACCATTAACGCTGGTTTTCACCCGGTCTTTGCTc                                                                                                  >  1:469424/1‑100 (MQ=255)

  caGTACGTGCTCAATGCTTTCGCGGGTGCGTTTACGCGTCATCTCCACCAGCCCCAGCGCCGAAAAACCATTAACGCTGGTTTTCACCCGGTCTTTGCTc                                                                                                  <  1:1189302/100‑1 (MQ=255)

  caGTACGTGCTCAATGCTTTCGCGGGTGCGTTTACGCGTCATCTCCACCAGCCACAGCGCCGAAAAACCATTAACGCTGGTTTTCACCCGGTCTTTGCTc                                                                                                  <  2:1337763/100‑1 (MQ=255)

   aGTACGTGCTCAATGCTTTCGCGGGTGCGTTTACGCGTCATCTCCACCAGCCCCAGCGCCGAAAAACCATTAACGCTGGTTTTCACCCGGTCTTTACTCa                                                                                                 <  2:2132109/100‑1 (MQ=255)

     tACGTGCTCAATGCTTTCGCGGGTGCGTTTACGCGTCATCTCCACCAGCCCCAGCGCCGAAAAACCATTAACGCTGGTTTTCACCCGGTCTTTGCTCAAc                                                                                               >  1:1892437/1‑100 (MQ=255)

      aCGTGCTCAATGCTTTCGCGGGTGCGTTTACGCGTCATCTCCACCAGCCCCAGCGCCGAAAAACCATTAACGCTGGTTTTCACCCGGTCTTTGCTCAACg                                                                                              <  1:1474895/100‑1 (MQ=255)

      aCGTGCTCAATGCTTTCGCGGGTGCGTTTACGCGTCATCTCCACCAGCCCCAGCGCCGAAAAACCATTAACGCTGGTTTTCACCCGGTCTTTGCTCAACg                                                                                              <  2:2016138/100‑1 (MQ=255)

      aCGTGCTCAATGCTTTCGCGGGTGCGTTTACGCGTCATCTCCACAAGCCCCAGCGACGAAAAACCATTAACGCTGGTTTTCACCCGGTCTTTACTCAACg                                                                                              <  2:2018639/100‑1 (MQ=255)

       cGTGCTCAATGCTTTCGCGGGTGCGTTTACGCGTCATCTCCACCAGCCCCAGCGCCGAAAAACCATTAACGCTGGTTTTCACCCGGTCTTTGCTCAACGc                                                                                             >  2:526413/1‑100 (MQ=255)

       cGTGCTCAATGCTTTCGCGGGTGCGTTTACGCGTCATCTCCACCAGCCCCAGCGCCGAAAAACCATTAACGCTGGTTTTCACCCGGTCTTTACTCAACGc                                                                                             >  1:1302860/1‑100 (MQ=255)

        gTGCTCAATGCTTTCGCGGGTGCGTTTACGCGTCATCTCCACCAGCCCCAGCGCCGAAAAACCATTAACGCTGGTTTTCACCCGGTCTTTGCTCAACGcc                                                                                            <  2:382833/100‑1 (MQ=255)

        gTGCTCAATGCTTTCGCGGGTGCGTTTACGCGTCATCTCCACCAGCCCCAGCGCCGAAAAACCATTAACGCTGGTTTTCACCCGGTCTTTGCTCAACGcc                                                                                            <  1:2227567/100‑1 (MQ=255)

         tGCTCAATGCTTTCGCGGGTGCGTTTACGCGTCATCTCCACCAGCCCCAGCGCCGAAAAACCATTAACGCTGGTTTTCAGCCGGTCTTTGCTCAACGACt                                                                                           >  1:1878158/1‑100 (MQ=255)

          gCTCAATGCTTTCGCGGGTGCGTTTACGCGTCATCTCCACCAGCCCCAGCGCCGAAAAACCATTAACGCTGGTTTTCACCCGGTCTTTGCTCAACGCCTg                                                                                          <  2:774691/100‑1 (MQ=255)

           ntCAATGCTTTCGCGGGTGCGTTTAAGCATCATCTCCACCAGCCACAGAGCCAAAGAACTATTAACGCTGGTTGTCACACGGTCGTTACTAAAAGCCt                                                                                           >  2:925102/2‑98 (MQ=255)

           cTCAATGCTTTCGCGGGTGCGTTTACGCGTCATCTCCACCAGCCCCAGCGCCGAAAAACCATTAACGCTGGTTTTCACCCGGTCTTTACTCAACGCCTGc                                                                                         <  2:2079680/100‑1 (MQ=255)

              aaTGCTTTCGCGGGTGCGTTTACGCGTCATCTCCACCAGCCCCAGCGCCGAAAAACCATTAACGCTGGTTTTCACCCGGTCTTTACTCAACGCCTGCTcc                                                                                      <  1:500994/100‑1 (MQ=255)

              aaTGCTTTCGCGGGTGCGTTTACGCGTCATCTCCACCAGCCCCAGCGCCGAAAAACCATTAACGCTGGTTTTCACCCGGTCTTTACTCAACGCCTGCTcc                                                                                      >  1:1639141/1‑100 (MQ=255)

                tGCTTTCGCGGGTGCGTTTACGCGTCATCTCCACCAGCCCCAGCGCCGAAAAACCATTAACGCTGGTTTTCACCCGGTCTTTGCTCAACGCCTGCTCCa                                                                                     >  2:683162/1‑99 (MQ=255)

                 gCTTTCGCGGGTGCGTTTACGCGTCATCTCCACCAGCCCCAGCGCCGAAAAACCATTAACGCTGGTTTTCACCCGGTCTTTGCTCAACGCCTGCTCCAGc                                                                                   <  1:2001747/100‑1 (MQ=255)

                 gCTTTCGCGGGTGCGTTTACGCGTCATCTCCACCAGCCCCAGCGCCGAAAAACCATTAACGCTGGTTTTCACCCGGTCTTTGCTCAACGCCTGCTCCAGc                                                                                   <  2:1911574/100‑1 (MQ=255)

                  cTTTCGCGGGTGCGTTTACGCGTCATCTCCACCAGCCCCAGCGCCGAAAAACCATTAACGCTGGTTTTCACCCGGTCTTTGCTCAACGCCTGCTCCAGCg                                                                                  <  2:207366/100‑1 (MQ=255)

                   tttCGCGTGTGCGTTTACGCGTCAACTCCACCAGCCCCAGCGCCGAAAAACCAGTAACGCTGGTTTTCACCCGGTCTTTGCTCAACGCCTGCTCCAGCg                                                                                  <  1:770496/99‑1 (MQ=255)

                   tttCGCGGGTGCGTTTACGCGTCATCTCCACCAGCCCCAGCGCCGAAAAACCATTAACGCTGGTTTTCACCCGGTCTTTGCTCAACGCCTGCTCCAGCGa                                                                                 <  1:58437/100‑1 (MQ=255)

                    ttCGCGGGTGCGTTTACGCGTCATCTCCACCAGCCCCAGCGCCGAAAAACCATTAACGCTGGTTTTCACCCGGTCTTTGCTCAACGCCTGCTCCAGCGAg                                                                                >  2:239806/1‑100 (MQ=255)

                    ttCGCGGGTGCGTTTACGCGTCATCTCCACCAGCCCCAGCGCCGAAAAACCATTAACGCTGGTTTTCACCCGGTCTTTACTCAACGCCTGCTCCAGCGAg                                                                                <  1:1425110/100‑1 (MQ=255)

                      cgcgGGTGCGTTTACGCGTCATCTCCACCAGCCCCAGCGCCGAAAAACCATTAACGCTGGTTTTCACCCGGTCTTTGCTCAACGCCTGCTCCAGCGAGTg                                                                              >  2:160307/1‑100 (MQ=255)

                       gcgGGTGCGTTTTCGCGTCATCTCCACCAGCCCCAGCGCCGAAAAACCATTAACGCTGGTTTTCACCCGGTCTTTGCTCAACGCCTGCTCCAGCGAGTgc                                                                             <  1:650115/100‑1 (MQ=255)

                         ggttGCGTTTACGCGTCATCTCCTCCAGCCCCAGCGCCGAAAAACCATTAACGCTGGTTTTCACCCGGTCTTTACTCAACGCCTGCTCCAGCGAGTgcag                                                                           <  2:1682760/97‑1 (MQ=255)

                         gggTGTGTTTACGCGTCATCTCCACCAGCCCCAGCGCCGAAAAACCATTAACGCTGGTTTTCACCCGGTCTTTGCTCAACGCCTGCTCCAGCGAGTgcag                                                                           <  1:221646/100‑1 (MQ=255)

                         gggTGCGTTTACGCGTCATCTCCCCCAGCCCCAGCGCAGAAAAACCATTAACGCTGGTTTTCACCCGGTCTTTGCTCAACGCCTGCTCCAGCGAGTgcag                                                                           <  2:774041/100‑1 (MQ=255)

                          ggTGCGTTTACGCGTCATCTCCACCAGCCCCAGCGCCGAAAAACCATTAACGCTGGTTTTCACCCGGTCTTTGCTCAACGCCTGCTCCAGCGAGTgcagc                                                                          <  1:1559839/100‑1 (MQ=255)

                          ggTGCGTTTACGCGTCATCTCCACCAGCCCCAGCGCCGAAAAACCATTAACGCTGGTGTTCACCCGGTCTTTACTCAACGCCTGCTCCAGCGAGTgcacc                                                                          <  1:1515305/100‑3 (MQ=255)

                          ggTGCGTTTACGCGTCATCTCCACCAGCCCCAGCGCCGAAAAACCATTAACGCTAGTTTTCACCCGGTCTTTGCTCAACGCCTGCTCCAGCGAGTgcagc                                                                          >  2:144961/1‑100 (MQ=255)

                           gTGCGTTTACGCGTCATCTCCACCAGCCCCAGCGCCGAAAAACCATTAACGCTGGTTTTCACCCGGTCTTTGCTCAACGCCTGCTCCAGCGAGTgcagca                                                                         >  1:483473/1‑100 (MQ=255)

                           gTGCGTTTACGCGTCATCTCCACCAGCCCCAGCGCCGAAAAACCATTAACGCTGGTTTTCACCCGGTCTTTGCTCAACGCCTGCTCCAGCGAGTgca                                                                            <  1:759652/97‑1 (MQ=255)

                              cGTTTACGCGTCATCTCCACCAGCCCCAGCGCCGAAAAACCATTAACGCTGGTTTTCACCCGGTCTTTGCTCAACGCCTGCTCCAGCGAGTGCAGCACTc                                                                      >  1:1685290/1‑100 (MQ=255)

                                  tACGCGTCATCTCCACCAGCCCCAGCGCCGAAAAACCATTAACGCTGGTTTTCACCCGGTCTTTGCTCAACGCCTGCTCCAGCGAGTGCAGCACTcggcg                                                                  >  2:833552/1‑100 (MQ=255)

                                  tACGCGTCATCTCCACCAGCCCCAGCGCCGAAAAACCATTAACGCTGGTTTTCACCCGGTCTTTACTCAACGCCTGCTCCAGCGAGTGCAGCACTcggcg                                                                  >  1:1720708/1‑100 (MQ=255)

                                     gcgTCATCTCCACCAGCCCCAGCGCCGAAAAACCATTAACGCTGGTTTTCACCCGGTCTTTGCTCAACGCCTGCTCCAGCGAGTGCAGCACTcggcggcg                                                               >  1:1029859/1‑100 (MQ=255)

                                     gcgTCATCTCCACCAGCACAAACACAGAAAAACCATTAACGCTGGTTTTCACCCGGTCTTTGCTCAACGCCTGCTCCAGCGAGTGCTGCACTcgctgg                                                                 <  2:344955/98‑5 (MQ=255)

                                      cgTCATCTCCACCAGCCCCAGCGCCGAAAAACCATTAACGCTGGTTTTCACCCGGTCTTTGCTCAACGCCTGCTCCAGCGAGTGCAGTACTcggcggcgn                                                              <  2:1844679/100‑2 (MQ=255)

                                      cgTCATCTCCACCAGCCCCAGCGCCGAAAAACCATTAACGCTGGTTTTCACCCGGTCTTTACTCAACGCCTGCTCCAGCGAGTGCAGCACTcggcggcgg                                                              >  1:376220/1‑100 (MQ=255)

                                      cgTCATCTCCACCAGCCCCAGCGCCGAAAAACCATTAACGCTGGTTTTCACCCGGTCTTTACTCAACGCCTGCTCCAGCGAGTGCAGCACTcggcggcgg                                                              >  1:1174571/1‑100 (MQ=255)

                                        tCATCTCCACCAGCCCCAGCGCCGAAAAACCATTAACGCTGGTTTTCACCCGGTCTTTACTCAACGCCTGCTCCAGCGAGTGCAGCACTCGGCGGCGGTg                                                            <  1:688904/100‑1 (MQ=255)

                                         cATCTCCCCCAGCCCCAGCGCCGAAAAACCATGAACGCTAGTTTTCACCCGGTCTTTGCTCAACGCCTACACCAGTGAGTGCAGCACTCGTGCGCGGTGa                                                           >  2:82238/1‑100 (MQ=255)

                                          aTCTCCACCAGCCCCAGCGCCGAAAAACCATTAACGCTGGTTTTCACCCGGTCTTTGCTCAACGCCTGCTCCAGCGAGTGCAGCACTCGGCGGCGGTGAt                                                          >  1:1927814/1‑100 (MQ=255)

                                            ctcCACCAGCCCCAGCGCCGAAAAACCATTAACGCTGGTTTTCACCCGGTCTTTGCTCAACGCCTGCTCCAGCGAGTGCAGCACTCGGCGGCGGTGATCt                                                        <  1:612596/100‑1 (MQ=255)

                                            ctcCACCAGCCCCAGCGCCGAAAAACCATTAACGCTGGTTTTCACCCGGTCTTTGCTCAACGCCTGCTCCAGCGAGTGCAGCACTCGGCGGCGGTGATCt                                                        >  2:707191/1‑100 (MQ=255)

                                            ctcCACCAGCCCCAGCGCCGAAAAACCATTAACGCTGGTTTTCACCCGGTCTTTACTCAACACCTGCTCCAGCGAGTGCAGCACTCGGCGGCGGTGATCt                                                        >  2:1992257/1‑100 (MQ=255)

                                              ccaccaGCCCCAGCGCCGAAAAACCATTAACGCTGGTTTTCACCCGGTCTTTACTCAACGCCTGCTCCAGCGAGTGCAGCACTCGGCGGCGGTGATCTTc                                                      >  1:1284166/1‑100 (MQ=255)

                                              ccaccaGCCCCAGCGCCGAAAAACCATTAACGCTGGTTTTCACCCGGACTTTGCTCAACGCCCGCTCCAGCGAGTGCAGCACTCGGCGGCGGTGATCTTc                                                      >  1:359484/1‑100 (MQ=255)

                                                accaGCCCCAGCGCCGAAAAACCATTAACGCTGGTTTTCACCCGGTCTTTGCTCAACGCCTGCTCCAGCGAGTGCAGCACTCGGCGGCGGTGATCTTCat                                                    <  2:2184543/100‑1 (MQ=255)

                                                 ccaGCCCCAGCGCCGAAAAACCATTAACGCTGGTTTTCACCCGGTCTTTGCTCAACGCCTGCTCCAGCGAGTGCAGCACTCGGCGGCGGTGATCTTCatt                                                   >  1:1321492/1‑100 (MQ=255)

                                                  caGCCCCAGCGCCGAAAAACCATTAACGCTGGTTTTCACCCGGTCTTTACTCAACGCCTGCTCCAGCGAGTGCAGCACTCGGCGGCGGTGATCTTCatta                                                  >  1:1380444/1‑100 (MQ=255)

                                                   aGCCCCAGCGCCGAAAAACCATTAACGCTGGTTTTCACCCGGTCTTTGCTCAACGCCTGCTCCAGCGAGTGCAGCACTCGGCGGCGGTGATCTTCattat                                                 <  2:2249962/100‑1 (MQ=255)

                                                    gCCCCAGCGCCGAAAAACCATTAACGCTGGTTTTCACCCGGTCTTTACTCAACGCCTGCTCCAGCGAGTGCAGCACTCGGCGGCGGTGATCTTCattatt                                                >  2:1551773/1‑100 (MQ=255)

                                                      cccAGCGCCGAAAAACCATTAACGCTGGTTTTCACCCGGTCTTTGCTCAACGCCTGCTCCAGCGAGTGCAGCACTCGGCGGCGGTGATCTTCATTATTCa                                              <  1:1561367/100‑1 (MQ=255)

                                                       ccAGCGCCGAAAAACCATTAACGCTGGTTTTCACCCGGTCTTTGCTCAACGCCTGCTCCAGCGAGTGCAGCACTCGGCGGCGGTGATCTTCattatt                                                <  2:655535/97‑1 (MQ=255)

                                                       ccAGCGCCGAAAAACCATTAACGCTGGTTTTCACCCGGTCTTTGCTCAACGCCTGCTCCAGCGAGTGCAGCACTAGGCGGCGGTGATCTTCATTATTCat                                             >  2:759758/1‑100 (MQ=255)

                                                       ccAGCGCCGAAAAACCATTAACGCTGGTTTTCACCCGGACTTTGCTCAACGCCTGCTCCAGCGAGTGCAGCACTCGGCGGCGGTGATCTTCATTATTCat                                             >  2:1380753/1‑100 (MQ=255)

                                                             ccGAAAAACCATTAACGCTGGTTTTCACCCGGTCTTTGCTCAACGCCTGCTCCAGCGAGTGCAGCACTCGGCGGCGGTGATCTTCATTATTCATATCGAt                                       >  2:1189828/1‑100 (MQ=255)

                                                              cGAAAAACCATTAACGCTGGTTTTCACCCGGTCTTTGCTCAACGCCTGCTCCAGCGAGTGCAGCACTCGGCGGCGGTGATCTTCATTATTCAGATCGATg                                      <  1:1174676/100‑1 (MQ=255)

                                                               gAAAAACCATTAACGCTGGTTTTCACCCGGTCTTTGCTCAACGCCTGCTCCAGCGAGTGCTGCACTCGCTGGCGGAGACCTTCATCATTGATATCGATGa                                     >  2:1710334/1‑100 (MQ=255)

                                                                aaaaaCCATTAACGCTGGTTTTCACCCGGTCTTTGCTCAACGCCTGCTCCAGCGAGTGCAGCACTCGGCGGCGGTGATCTTCATTATTCATATCGATGaa                                    <  1:1189832/100‑1 (MQ=255)

                                                                 aaaaCCATTAGCGCTGGTTTTCACCCGGTCTTTACTCAACGCCTGCTCCAGCGAGTGCAGCACTCGTCGTCGGTGATCTTCATTATTCATATCGATGaaa                                   <  2:1472536/100‑1 (MQ=255)

                                                                 aaaaCCATTAACGCTGGTTTTCACCCGGTCTTTGCTCAACGCCTGCTCCAGCGAGTGCAGCACTCGGCGGCGGTGATCTTCATTATTCATATCGATGaaa                                   <  1:21882/100‑1 (MQ=255)

                                                                  aaaCCATTAACGCTGGTTTTCACCCGGTCTTTACTCAACGCCTGCTCCAGCGAGTGCAGCACTCGGCGGCGGTGATCTTCATTATTCAGATCggaagagc                                  >  1:1175920/1‑93 (MQ=255)

                                                                    aCCATTAACGCTGGTTTTCACCCGGTCTTTGCTCAACGCCTGCTCCAGCGAGTGCAGCACTCGGCGGCGGTGATCTTCATTATTCATATCGATGAAATCa                                >  1:1928254/1‑100 (MQ=255)

                                                                    aCCATTAACGCTGGTTTTCACCCGGTCTTTACTCATCGCCTGCTCCAGCGAGTGCAGCACTCGGCGGCGGTTATCTTCATTATTCATATCGATGAAATCa                                <  2:1302854/100‑1 (MQ=255)

                                                                       aTTAACGCTGGTTTTCACCCGGTCTTTACTCAACGCCTGCTCCAGCGAGTGCAGCACTCGGCGGCGGTGATCTTCATTATTCATATCGATGAAATCaata                             >  1:1847271/1‑100 (MQ=255)

                                                                       aTTAACGCTGGTTTTCACCCGGTCTTTACTCAACGCCTGCTCCAGCGAGTGCAGCACTCGGCGGCGGTGATCTTCATTATTCATATCGATGAAATCaata                             <  2:657688/100‑1 (MQ=255)

                                                                        ttAACGCTAGTGTTCACCCGGTTTTTGCTTAACGCCTGCTTCAGCGAGTGAAGCATTCGGCTGTAGTGCTCTTCATTATTCATAACGATGAAATCaat                              <  2:1819873/98‑1 (MQ=255)

                                                                         tAACGCTGGTTTTCACCCGGTCTTTGCTCAACGCCTGCTCCAGCGAGTGCAGCACTCGGCGGCGGTGATCTTCATTATTCATATCGATGAAATCaataat                           <  2:1091200/100‑1 (MQ=255)

                                                                          aaCGCTGGTTTTCACCCGGTCTTTGCTCAACGCCTGCTCCAGCGAGTGCAGCACTCGGCGGCGGTGATCTTCATTATTCATATCGATGAAATCAATAATg                          >  2:1182426/1‑100 (MQ=255)

                                                                          aaCGCTGGTTTTCACCCGGTCTTTACTCAACGCCTGCTCCAGCGAGTGCAGCACTCGGCGGCGGTGATCTTCATTATTCATATCGATGAAATCAATAATg                          <  2:847123/100‑1 (MQ=255)

                                                                                 gTTTTCACCCGGTCTTTGCTCAACGCCTGCTCCAGCGAGTGCAGCACTCGGCGGCGGTGATCTTCATTATTCATATCGATGAAATCAATAATGATAATcc                   >  2:920265/1‑100 (MQ=255)

                                                                                  ttttCACCCGGTCTTTTCTCAACGCCTACTCCAGCGACTGCAGCACTCGTCGGCAGTTATCTTCATTATTCATATCCATGAAATCAATAATGATAATcc                   <  1:1424377/99‑1 (MQ=255)

                                                                                  ttttCACCCGGTCTTTACTCAACGCCTGCTCCAGCGAGTGCAGCACTCGGCGGCGGTGATCTTCATTATTCATATCGATGAAATCAATAATGATAATccc                  >  1:2136618/1‑100 (MQ=255)

                                                                                   tttCACCCGGTCTTTACTCAACGCCTGCTCCAGCGAGTGCAGCACTCGGCGGCGGTGATCTTCATTATTCATATCGATGAAATCAATAATGATAATccc                  >  2:1989969/1‑99 (MQ=255)

                                                                                    ttCACCCGGTCTTTACTCAACGCCTGCTCCAGCGAGTGCAGCACTCGGCGGCGGTGATCTTCATTATTCATATCGATGAAATCAATAATGATAATCCCGc                <  1:1857238/100‑1 (MQ=255)

                                                                                     tCACCCGGTCTTTGCTCAACGCCTGCTCCAGCGAGTGCAGCACTCGGCGGCGGTGATCTTCATTATTCATATCGATGAAATCAATAATGATAATCCCGcc               <  1:271311/100‑1 (MQ=255)

                                                                                      cACCCGGTCTTTACTCAACGCCTGCTCCAGCGAGTGCAGCACTCGGCGGCGGTGATCTTCATTATTCATATCGATGAAATCAATAATGATAATCCCGccc              >  1:1107525/1‑100 (MQ=255)

                                                                                      cACCCGGTCTTTACTCAACGCCTGCTCCAGCGAGTGCAGCACTCGGCGGCGGTGATCTTCATTATTCATATCGATGAAATCAATAATGATAATCCCGccc              >  1:1405565/1‑100 (MQ=255)

                                                                                        cccGGTCTTTACTCAACGCCTGCTCCAGCGAGTGCAGCACTCGGCTGCGGTGATCTTCATTATTCATATCGATGAAATCAATAATGATAATCCCGCCCAg            >  2:398473/1‑100 (MQ=255)

                                                                                            gTCTTTGCTCAACGCCTGCTCCAGCGAGTGCAGCACTCGGCGGCGGTGATCTTCATTATTCATATCGATGAAATCAATAATGATAATCCCGCCCAGATTa        <  2:536952/100‑1 (MQ=255)

                                                                                             tCTTTGCTCACCGCCTGCTCCAGCGAGTGCAGCACTCGGCGGCGGTGATCTTCATTATTCATATCGATGAAATCAATAATGATAATCCCGCCCAGATTAc       <  1:538565/100‑1 (MQ=255)

                                                                                             tCTTTACTCAACGCCTGCTCCAGCGAGTGCAGCACTCGGCGGCGGTGATCTTCATTATTCATATCGATGAAATCAATAATGATAATCCCGCCCAGATTAc       <  1:2240704/100‑1 (MQ=255)

                                                                                              cTTTGCTCAACGCCTGCTCCAGCGAGTGCAGCACTCGGCGGCGGTGATCTTCATTATTCATATCGATGAAATCAATAATGATAATCCCGCCCAGATTACg      <  1:1351532/100‑1 (MQ=255)

                                                                                              cTTTACTCAACGCCTGCTCCAGCGTGTGCAGCACTCGGCGGCGGTGATCTTCATTATTCATATCGATGAAATCAATAATGATAATCCCGCCCAGATTACg      <  2:95360/100‑1 (MQ=255)

                                                                                              cTTTACTCAACGCCTGCTCCAGCGAGTGCAGCACTCGGCGGCGGTGATCTTCATTATTCATATCGATGAAATCAATAATGATAATCCCGCCCAGATTACg      <  1:316628/100‑1 (MQ=255)

                                                                                               tttGCTCAACGCCTGCTCCAGCGAGTGCAGCACTCGGCGGCGGTGATCTTCATTATTCATATCGATGAAATCAATAATGATAATCCCGCCCAGATTACGc     <  2:159902/100‑1 (MQ=255)

                                                                                                ttGCTCAACGCCTGCTCCAGCGAGTGCAGCACTCGGCGGCGGTGATCTTCATTATTCATATCGATGAAATCAATAATGATAATCCCGCCCAGATTACGCa    >  1:283945/1‑100 (MQ=255)

                                                                                                  gCTCAACGCCTGCTCCAGCGAGTGCAGCACTCGGCGGCGGTGATCTTCATTATTCATATCGATGAAATCAATAATGATAATCCCGCCCAGATTACGCAAc  >  2:1908425/1‑100 (MQ=255)

                                                                                                  gCTCAACGCCTGCTCCAGCGAGTGCAGCACTCGGCGGCGGTGAGCTTCATTATTCATATCGATGAAATCAATAATGATAATCCCGCCCAGATTACGCAAc  <  2:664908/100‑1 (MQ=255)

CACAGTACGTGCTCAATGCTTTCGCGGGTGCGTTTACGCGTCATCTCCACCAGCCCCAGCGCCGAAAAACCATTAACGCTGGTTTTCACCCGGTCTTTGCTCAACGCCTGCTCCAGCGAGTGCAGCACTCGGCGGCGGTGATCTTCATTATTCATATCGATGAAATCAATAATGATAATCCCGCCCAGATTACGCAAC  >  NC_000913/3396591‑3396788

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`