| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,420,599 | C→T | 31.0% | Q156* (CAG→TAG) | yhdX → | putative amino acid ABC transporter permease |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,420,599 | 0 | C | T | 31.0% | 119.8 / 65.7 | 90 | Q156* (CAG→TAG) | yhdX | putative amino acid ABC transporter permease |
| Reads supporting (aligned to +/- strand): ref base C (31/31); new base T (14/14); total (45/45) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.08e-01 | |||||||||||
TTCCACAATTTATATTGAGATCTTCCGTAATATTCCCCCGCTGCTGCAAATCTTCTTCTGGTACTTTGCCGTGTTGCGCAATTTGCCCGGACCACGCCAGGCTGTGAGCGCGTTTGATCTGGCCTTTTTGAGCAATCGTGGGCTTTATATTCCGTCACCGCAGCTG‑GGAGACGGATTTATTGCGTTTATCCTGG > NC_000913/3420502‑3420695 | ttCCACAATTTATATTGAGATCTTCCGTTATATGCCCGCGCTGCTGCAAATCTTCTTCTGGTACTTTGTCTTGTTGCGCAATTTACCCGGACCACGCCAg < 2:900479/100‑1 (MQ=255) tCCACAATTTATATTGAGATCTTCCGTAATATTCCCCCGCTGCTGCAAATCTTCTTCTGGTACTTTGCCGTGTTGCGCAATTTGCCCGGACCACGCTAgg > 2:575380/1‑100 (MQ=255) ccACAATTTATATTGAGATCTTCCGTAATATTCCCCCGCTGCTGCAAATCTTCTTCTGGTACTTTGCCGTGTTGCGCAATTTGCCCGGACCACGCTAGGc > 1:2020229/1‑100 (MQ=255) ccACAATTTATATTGAGATCTTCCGTAATATTCCCCCGCTGCTGCAAATCTTCTTCTGGTACTTTGCCGTGTTGCGCAATTTGCCCGGACCACGCCAGGc > 2:991146/1‑100 (MQ=255) cacaATTTATATTGAGATCTTCCGTAATATTCCCCCGCTGCTGCAAATCTTCTTCTGGTACTTTGCCGTGTTGCGCAATTTGCCCGGACCACGCCAGGCt > 1:1972679/1‑100 (MQ=255) acaATTTATATTGAGATCTTCCGTAATATTCCCCCGCTGCTGCAAATCTTCTTCTGGTACTTTGCCGTGTTGCGCAATTTGCCCGGACCACGCCAGGCtg < 1:562281/100‑1 (MQ=255) aaTTTATATTGAGATCTTCCGTAATATTCCCCCGCTGCTGCAAATCTTCTTCTGGTACTTTGCCGTGTTGCGCAATTTGCCCGGACCACGCTAGGCtgtg < 2:722513/100‑1 (MQ=255) tttATATTGAGATCTTCCGTAATATTCCCCCGCTGCTGCAAATCTTCTTCTGGTACTTTGCCGTGTTGCGCAATTTGCCCGGACCACGCCAGGCTGTGAg > 1:255337/1‑100 (MQ=255) tataTTGAGATCTTCCGTAATATTCCCCCGCTGCTGCAAATCTTCTTCTGGTACTTTGCCGTGTTGCGCAATTTGCCCGGACCACGCCAGGCTGTGAgcg > 1:1130729/1‑100 (MQ=255) atTGAGATCTTCCGTAATATTCCCCCGCTGCTGCAAATCTTCTTCTGGTACTTTGCCGTGTTGCGCAATTTGCCCGGACCACGCTAGGCTGTGAGCGCGt > 2:1925813/1‑100 (MQ=255) atTGAGATCTTCCGTAATATTCCCCCGCTGCTGCAAATCTTCTTCTGGTACTTTGCCGTGTTGCGCAATTTGCCCGGACCACGCCAGGCTGTGAGCGCGt > 2:1564084/1‑100 (MQ=255) agtGAGATCTTCCATAATATTCCCCCGCTGCTGCAAATCTTCTTCTGGTACTTTGCCGTGTTGCGCAATTTGCCCGGACCACGCCAGGCTGTGAGCGCGt > 1:1522882/3‑100 (MQ=255) tGAGATCTTCCGTAATATTCCCCCGCTGCTGCAAATCTTCTTCTGGTACTTTGCCGTGTTGGGCAATTTGCCCGGACCACGCTAGGCTGTGAGCGCGttt > 2:1085918/1‑100 (MQ=255) agaTCTTCCGTACTATTCCCCCGCTGCTGCAAATCTTCTTCTGGTACTTTGCCGTGTTGCGCAATTTGCCCGGACCACGCCCGGCTGTGAGCGCGTTTg > 2:1450832/1‑99 (MQ=255) aTCTTCCGTAATATTCCCCCGCTGCTGCAAATCTTCTTCTGTTACTTTGCCGTGTTGCGCTATTTGCCCGGACCTTTCTAGGCTGTGAGAGCGTTTg < 2:935044/97‑1 (MQ=255) aTCTTCCGTAATATTCCCCCGCTGCTGCAAATCTTCTTCTGGTACTTTGCCGTGTTGCGCAATTTGCCCGGACCACGCCAGGCTGTGAGCGCGTTTGATc < 2:1496327/100‑1 (MQ=255) tCTTCCGTAATATTCCCCCGCTGCTGCAAATCTTCTTCTGGTACTTTGCCGTGTTGCGCAATTTGCCCGGACCACGCTAGGCTGTGAGCGCGTTTGATc < 1:338570/99‑1 (MQ=255) cTTCCGTAATATTCCCCCGCTGCTGCAAATCTTCTTCTGGTACTTTGCCGTGTTGCGCAATTTGCCCGGACCACGCCAGGCTGTGAGCGCGTTTGATCTg < 2:1667153/100‑1 (MQ=255) ttCCGTAATATTCCCCCGCTGCTGCAAATCTTCTTCTGGTACTTTGCCGTGTTGCGCAATGTGCCCGGACCACGCCAGGCTGTGAGCGCGTTTGATCTgg < 1:510107/100‑1 (MQ=255) ccGTAATATTCCCCCGCTGCTGCAAATCTTCTTCTGGTACTTTGCCGTGTTGCGCAATTTGCCCGGACCACGCCAGGCTGTGAGCGCGTTTGATCTGGcc < 2:771624/100‑1 (MQ=255) cGTAATATTCCCCCGCTGCTGCAAATCTTCTTCTGGTACTTTGCCGTGTTGCGCAATTTGCCCGGACCACGCCAGGCTGTGAGCGCGTTTGATCTGGCCt > 2:1845028/1‑100 (MQ=255) tAATATTCCCCCGCTGCTGCAAATCTTATTCTGGTACTTAGCCGTGTTGCGCAATTTGCCCGCAGCAAGCCCGACTGTGGGCGCGTTTGATCTGGc < 2:120071/96‑1 (MQ=255) aaTATTTCCCCGCTGCTGCAAATCGTCTTCTGGTACTTTGCCGTGTTGCGCAATTTGACCTGACCACGCCAGGCTGTGAGCGCGTTTGATCTGGCCtttt < 2:533553/100‑1 (MQ=255) aaTATTCCCCCGCTGCTGCAAATCTTCTTCTGGTACTTTGCCGTGTTGCGCAATTTGCCCGGACCACGCTAGGCTGTGAGCGCGTTTGATCTGGCCtttt < 2:2023047/100‑1 (MQ=255) tatTCCCCCGCTGCTGCAAATCTTCTTCTGGTACTTTGCCGTGTTGCGCAATTTGCCCGGACCACGCCAGGCTGTGAGCGCGTTTGATCTGGCCTTTTTg < 2:1522872/100‑1 (MQ=255) tatTCCCCCGCTGCTGCAAATCTTCTTCTGGTACTTTGCCGTGTTGCGCAATTTGCCCGGACCACGCCAGGCTGTGAGCGCGTTTGATCTGGCCTTTTTg < 1:431174/100‑1 (MQ=255) atTCCCCCGCTGCTGCAAATCTTCTTCTGGTACTTTGCCGTGTTGCGCAATTTGCCCGGACCACGCCAGGCTGTGAGCGCGTTTGATCTGGCCTTTTTGa < 2:363241/100‑1 (MQ=255) ttCCCCCGCTGCTGCAAATCTTCTTCTGGTACTTTGCCGTGTTGCGCAATTTGCCCGGACCACGCTAGGCTGTGAGCGCGTTTGATCTGGCCTTTTTGAg < 1:1273902/100‑1 (MQ=255) tCCCCCGCTGCTGCAAATCTTCTTCTGGTACTTTGCCGTGTTGCGCAATTTGCCCGGACCACGCTAGGCTGTGAGCGCGTTTGATCTGGCCTTTTTGAGc < 1:575379/100‑1 (MQ=255) cccccGCTGCTGCCAATCTTCTTCTCGTACTTTGCCGTGTTTCGCAACTTGCCCGGACCACGCCTGGCTGTGAGCTCGTTTGATCTGGCCtcattg > 2:85646/1‑91 (MQ=255) cccccGCTGCTGCAAATCTTCTTCTGGTACTTTGCCGTGTTGCGCAATTTGCCCGGACCACGCCAGGCTGTGAGCGCGTTTGATCTGGCCTTTTTGAGCa > 2:152716/1‑100 (MQ=255) ccccGCTGCTGCAAATCTTCTTCTGGTACTTTGCCGTGTTGCGCAATTTGCCCGGACCACGCTAGGCTGTGAGCGCGTTTGATCTGGACTTTTTGAGCaa > 2:2117690/1‑100 (MQ=255) cGCTGCTGCAAATCTTCTTCTGGTACTTTGCCGTGTTGCGCAATTTGCCCGGACCACGCCAGGCTGTGAGCGCGTTTGATCTGGCCTTTTTGAGCAATc > 2:1166305/1‑99 (MQ=255) ctgctgCAAATCTTCTTCTGGTACTTTGCCGTGTTGCGCAATTTGCCCGGACCACGCTAGGCTGTGAGCGCGTTTGATCTGGCCTTTTTGAGCAATCGt > 1:870385/1‑99 (MQ=255) ctgctgCAAATCTTCTTCTGGTACTTTGCCGTGTTGCGCAATTTGCCCGGACCACGCTAGGCTGTGAGCGCGTTTGATCTGGCCTTTTTGAGCAATCGTg < 2:481953/100‑1 (MQ=255) ctgctgCAAATCTTCTTCTGGTACTTTGCCGTGTTGCGCAATTTGCCCGGACCACGCCAGGCTGTGAGCGCGTTTGATCTGGCCTTTTTGAGCAATCGTg < 1:2099543/100‑1 (MQ=255) gctgcAAATCTTCTTCTGGTACTTTGCCGTGTTGCGCAATTTGCCCGGACCACGCTAGGCTGTGAGCGCGTTTGCTCTGGCCTTTTTGAGCAATCGTgg > 1:1103063/1‑99 (MQ=255) ctgcAAATCTTCTTCTGGTACTTTGCCGTGTTGCGCAATTTGCCCGGACCACGCCAGGCTGTGAGCGCGTTTGATCTGGCCTTTTTGAGCAATCGTGGGc < 1:546471/100‑1 (MQ=255) gcAAATCTTCTTCTGGTACTTTGCCGTGTTGCGCAATTTGCCCGGACCACGCTAGGCTGTGAGCGCGTTTGATCTGGCCTTTTTGAGCAATCGTGGGCtt < 1:685462/100‑1 (MQ=255) gcAAATCTTCTTCTGGTACTTTGCCGTGTTGCGCAATTTGCCCGGACCACGCTAGGCTGTGAGCGCGTTTGATCTGGCCTTTTTGAGCAATCGTGGGCtt > 2:116166/1‑100 (MQ=255) cAAATCTTCTTCTGGTACTTTGCCGTGTTGCGCAATTTGCCCGGACCACGCCAGGCTGTGAGCGCGTTTGATCTGGCCTTTTTGAGCAATCGTGGGCttt < 2:1361664/100‑1 (MQ=255) cAAATCTTCTTCTGGTACTTTGCCGTGTTGCGCAATTTGCCCGGACCACGCCAGGCTGTGAGCGCGTTTGATCTGGCCTTTTTGAGCAATCGTGGGCttt < 1:1023/100‑1 (MQ=255) cAAATCTTCTTATGGTACTTTGCAGTGTTGAGCAATTTGCCTGGACCACGCCAGGCTGTGAGCGCGTTTGATCTGGCCTTTTTGAGCAATCGTGGGCttt > 2:1842476/1‑100 (MQ=255) aaaTCTTCTTCTGGTACTTTGCCGTGTTGCGCAATTTGCCCGGACCACGCTAGGCTGTGAGCGCGTTTGATCTGGCCTTTTTGAGCAATCGTGGGCTTta > 2:247354/1‑100 (MQ=255) aaaTCTTCTTCTGGTACTTTGCAGTGTTGCGCAATTTGCCCGGACCACGCCAGGCTGTGAGCGCGTTTGATCTGGCCTTTTTGAGCACTCGTGGGCTTta > 2:1277035/1‑100 (MQ=255) aTCTTCTTCTGGTACTTTGCCGTGTTGCGCAATTTGCCCGGACCACGCCAGGCTGTGAGCGCGTTTGATCTGGCCTTTTTGAGCAATCGTGGGCTTtata > 2:1241498/1‑100 (MQ=255) ttcttctGGTACTTTGCCGTGTTGCGCAATTTGCCCGGACCACGCTAGGCTGTGAGCGCGTTTGATCTGGCCTTTTTGAGCAATCGTGGGCTTTATATTc > 2:914369/1‑100 (MQ=255) ttcttctGGTACTTTGCCGTGTTGCGCAATTTGCCCGGACCACGCCAGGCTGTGAGCGCGTTTGATCTGGCCTTTTTGAGCAATCGTGGGCTTTATATTc > 1:1417444/1‑100 (MQ=255) tcttctGGTACTTTGCCGTGTTGCGCAATTTGCCCGGACCACGCCAGGCTGTGAGCGCGTTTGATCTGGCCTTTTTGAGCAATCGTGGGCTTTATATTcc < 2:916750/100‑1 (MQ=255) tcttctGGTACTTTGCCGTGTTGCGCAATTTGCCCGGACCACGCCAGGCTGTGAGCGCGTTTGATCTGGCCTTTTTGAGCAATCGTGGGCTTTATATTcc > 2:1319271/1‑100 (MQ=255) cttctGGTACTTTGCCGTGTTGCGCAATTTGCCCGGACCACGCTAGGCTGTGAGCGCGTTTGATCTGGCCTTTTTGAGCAATCGTGGGCTTTATATTCCg < 2:575727/100‑1 (MQ=255) cttctGGTACTTTGCCGTGTTGCGCAATTTGCCCGGACCACGCCAGGCTGTGAGCGCGTTTGATCTGGCCTTTTTGAGCAATCGTGGGCTTTATATTCCg > 2:1650115/1‑100 (MQ=255) cttctGGTACTTTGCCGTGTTGCGCAATTTGCCCGGACCACGCCAGGCTGTGAGCGCGTTTGATCTGGCCTTTTTGAGCAATCGTGGGCTTTATATTCCg > 1:389591/1‑100 (MQ=255) ttctGGTACTTTGCCGTGTTGCGCAATTTGCCCGGACCACGCCAGGCTGTGAGCGCGTTTGATCTGGCCTTTTTGAGCAATCGTGGGCTTTATATTCCGt < 1:586788/100‑1 (MQ=255) tctGGTACTTTGCCGTGTTGCGCAATTTGCCCGGACCACGCCAGGCTGTGAGCGCGTTTGATCTGGCCTTTTTGAGCAATCGTGGGCTTTATATTCCGTc > 1:1396540/1‑100 (MQ=255) ctGGTACTTTGCCGTGTTGCGCAATTTGCCCGGACCACGCCAGGCTGTGAGCGCGTTTGATCTGGCCTTTTTGAGCAATCGTGGGCTTTATATTCCGTCa < 2:1090880/100‑1 (MQ=255) ctGGTACTTTGCCGTGTTGCGCAATTTGCCCGGACCACACCAGGCTGTGAGCGCGTTTGATCTGGCCTTTTTGAGCAATCGTGGGCTTTATATTCCGTCa > 2:1376894/1‑100 (MQ=255) tGGTACTTTGCCGTGTTGCGCAATTTGCCCGGACCACGCCAGGCTGTGAGCGCGTTTGATCTGGCCTTTTTGTGCATTTGTGTGCTTTATATTCCGTCAc > 2:2192889/1‑100 (MQ=255) ggTACTTTGCCGTGTTGCGCAATTTGCCCGGACCACGCTAGGCTGTGAGCGCGTTTGATCTGGCCTTTTTGAGCAATCGTGGGCTTTATATTCCGTCAcc > 1:1419620/1‑100 (MQ=255) tACTTTGCCGTGTTGCGCAATTTGCCCGGACCACGCCAGGCTGTGAGCGCGTTTGATCTGGCCTTTTTGAGCAATCGTGGGCTTTATATTCCGTCACCGc < 1:1151355/100‑1 (MQ=255) aCTTTGCCGTGTTGCGCAATTTGCCCGGACCACGCCAGGCTGTGAGCGCGTTTGATCTGGCCTTTTTGAGCAATCGTGGGCTTTATATTCCGTCACCGCa < 2:109130/100‑1 (MQ=255) cTTTGCCGTGTTGCGCAATTTGCCCGGACCACGCCAGGCTGTGAGCGCGTTTGATCTGGCCTTTTTGAGCAATCGTGGGCTTTATATTCCGTCACCGCAg > 1:1436691/1‑100 (MQ=255) ttGCCGTGTTGCGCAATTTGCCCGGACCACGCCAGGCTGTGAGCGCGTTTGATCTGGCCTTTTTGAGCAATCGTGGGCTTTATATTCCGTCACCGCAGCt < 1:84418/100‑1 (MQ=255) ttGCCGTGTTGCGCAATTTGCCCGGACCACGCCAGGCTGTGAGCGCGTTTGATCTGGCCTTTTTGAGCAATCGTGGGCTTTATATTCCGTCACCGCAGCt > 1:1931360/1‑100 (MQ=255) ccGTGTTGCGCAATTTGCCCGGACCACGCCAGGCTGTGAGCGCGTTTGATCTGGCCTTTTTGAGCAATCGTGGGCTTTATATTCCGTCACCGCAGCTg‑gg < 2:648110/100‑1 (MQ=255) ccGTGTTGCGCAATTTGCCCGGACCACGCCAGGCTGTGAGCGCGTTTGATCTGGCCTTTTTGAGCAATCGTGGGCTTTATATTCCGTCACCGCAGCTg‑gg < 1:1357477/100‑1 (MQ=255) cGTGTTGCGCAATTTGCCCGGACCACGCCAGGCTGTGAGCGCGTTTGATCTGGCCTTTTTGAGCAATCGTGGGCTTTATATTCCGTCACCGCAGCTG‑Gga < 1:1228123/100‑1 (MQ=255) gtgtTGCGCAATTTGCCCGGACCACGCTAGGCTGTGAGCGCGTTTGATCTGGCCTTTTTGAGCAATCGTGGGCTTTATATTCCGTCACCGCAGCTG‑Ggag > 1:1767227/1‑100 (MQ=255) tgtTGCGCAATTTGCCCGGACCACGCTAGGCTGTGAGCGCGTTTGATCTGGCCTTTTTGAGCAATCGTGGGCTTTATATTCCGTCACCGCAGCTG‑Gga < 2:1244788/98‑1 (MQ=255) ttGCGCAATTTGCCCGGACCACGCCAGGCTGTGAGCGCGTTTGATCTGGCCTTTTTGAGCAATCGTGGGCTTTATATTCCGTCACCGCAGCTG‑GGAGACg > 2:2117003/1‑100 (MQ=255) gcgcAATTTGCCCGGACCACGCTAGGCTGTGAGCGCGTTTGATCTGGCCTTTTTGAGCAATCGTGGGCTTTATATTCCGTCACCGCAGCTT‑GGAGACGGa > 1:771213/1‑100 (MQ=255) gcgcAATTTGCCCGGACCACGCCAGGCTGTGAGCGCGTTTGATCTGGCCTTTTTGAGCAATCGTGGGCTTTATATTCCGTCACCGCAGCTG‑GGAGACGGa > 2:1645271/1‑100 (MQ=255) gcgcAATTTGCCCGGACCACACTAGGCTGTGAGCGCGTTTGATCTGGCCTTTTTGAGCAATCGTGGGCTTTATATTCCGTCACCGCAGCTG‑GGAGACGGa < 1:1859182/100‑1 (MQ=255) cgcAATTTGCCCGGACCACGCCAGGCTGTGAGCGCGTTTGATCTGGCCTTTTTGAGCAATCGTGGGCTTTATATTCCGTCACCGCAGCTG‑GGAGACGGAt > 2:244979/1‑100 (MQ=255) cgcAATTTGCCCGGACCACGCCAGGCTGTGAGCGCGATTGATCTGGCCTTTTTGAGCAATCGTGGGCTTTATATTCCGTCACCGCAGCTG‑GGAGACGGAt < 1:2138948/100‑1 (MQ=255) cAATTTGCCCGGACCACGCTAGGCTGTGAGCGCGTTTGATCTGGCCTTTTTGAGCAATCGTGGGCTTTATATTCCGTCTCC‑CAGCTGCGGTGACGGaata < 1:1140390/100‑4 (MQ=37) cAATTTGCCCGGACCACGCCAGGCTGTGAGCGCGTTTGATCTGGCCTTTTTGAGCAATCGTGGGCTTTATATTCCGTCACCGCAGCTG‑GGAGACGGAttt > 2:435389/1‑100 (MQ=255) tGCCCGGACCACGCCAGGCTGTGAGCGCGTTTGATCTGGCCTTTTTGAGCAATCGTGGGCTTTATATTCCGTCTCC‑CAGCTGCGGTGACGGaatataaag < 1:1942173/100‑9 (MQ=25) gCCCGGACCACGCCAGGCTGTGAGCGCGTTTGATCTGGCCTTTTTGAGCAATCGTGGGCTTTATATTCCGTCTCC‑CAGCTGCGGTGACGGaatataaagc < 1:1448396/100‑10 (MQ=25) gCCCGGACCACGCCAGGCTGTGAGCGCGTTTGATCTGGCCTTTTTGAGCAATCGTGGGCTTTATATTCCGTCACCGCAGCTG‑GGAGACGGATTTATTGCg > 1:1750156/1‑100 (MQ=255) ccGGACCACGCTAGGCTGTGAGCGCGTTTGATCTGGCCTTTTTGAGCAATCGTGGGCTTTATATTCCGTCACCGCAGCTG‑GGAGACGGATTTATTGCGtt > 1:1685756/1‑100 (MQ=255) ccGGACCACGCCAGGCTGGGAGCGCGTTTGATCTGGCCTTTTTGAGCAATCGTGGGCTTTATTTTCCGTCACCGCAGCTG‑GGAGACGGATTTATTGCGt < 2:1393391/99‑1 (MQ=255) cGGACCACGCCAGGCTGTGAGCGCGTTTGATCTGGCCTTTTTGAGCAATCGTGGGCTTTATATTCCGTCACCGCAGCTG‑GGAGACGGATTTATTGCGttt > 2:1042228/1‑100 (MQ=255) cGGACCACGCCAGGCTGTGAGCGCGTTTGATCTGGCCTTTTTGAGCAATCGTGGGCTTTATATTCCGTCACCGCAGCTG‑GGAGACGGATTTATTGCGttt < 2:1121757/100‑1 (MQ=255) acgaCGCCAGGCTGTGAGCGCGTTTGATCTGGCCTTTTTGAGCAATCGTGGGCTTTATATTCGGACACCGCAGCTG‑GGAGACGGATTTATTGCCTTTAta > 2:541033/4‑99 (MQ=255) aCCACGCTAGGCTGTGAGCGCGTTTGATCTGGCCTTTTTGAGCAATCGTGGGCTTTATATTCCGTCACCGCAGCTG‑GGAGACGGATTTATTGCGTTTATc < 1:1264178/100‑1 (MQ=255) cACGCTAGGCTGTGAGCGCGTTTGATCTGACCTTTTTGAGCAATCGTGGGCTTTATATTCCGTCACCGCAGCTG‑GGAGACGGATTTATTGCGTTTATcc < 2:359960/99‑1 (MQ=255) aCGCCAGGCTGTGAGCGCGTTTGATCTGGCCTTTTTGAGCAATCGTGGGCTTTATATTCCGTCACCGCAGCTG‑GGAGACGGATTTATTGCGTTTATCCTg < 2:1882898/100‑1 (MQ=255) aCGCCAGGCTGTGAGCGCGTTTGATCTGGCCTTTTTGAGCAATCGTGGGCTTTATATTCCGTCACCGCAGCTG‑GGAGACGGATTTATTGCGTTTATCCTg < 2:1280274/100‑1 (MQ=255) cGCCAGGCTGTGAGCGCGTTTGATCTGGCCTTTTTGAGCAATCGTGGGCTTTATATTCCGTCACCGCAGCTG‑GGAGACGGATTTATTGCGTTTATCCTgg > 1:533023/1‑100 (MQ=255) | TTCCACAATTTATATTGAGATCTTCCGTAATATTCCCCCGCTGCTGCAAATCTTCTTCTGGTACTTTGCCGTGTTGCGCAATTTGCCCGGACCACGCCAGGCTGTGAGCGCGTTTGATCTGGCCTTTTTGAGCAATCGTGGGCTTTATATTCCGTCACCGCAGCTG‑GGAGACGGATTTATTGCGTTTATCCTGG > NC_000913/3420502‑3420695 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |