| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,706,048 | G→T | 17.9% | intergenic (‑258/+50) | dppB ← / ← dppA | dipeptide/heme ABC transporter permease/dipeptide/heme ABC transporter periplasmic binding protein; dipeptide chemotaxis receptor |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,706,048 | 0 | G | T | 17.9% | 303.7 / 36.3 | 111 | intergenic (‑258/+50) | dppB/dppA | dipeptide/heme ABC transporter permease/dipeptide/heme ABC transporter periplasmic binding protein; dipeptide chemotaxis receptor |
| Reads supporting (aligned to +/- strand): ref base G (44/45); new base T (17/2); total (64/47) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.66e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.96e-01 | |||||||||||
Only 100 of 115 total aligned reads displayed.
GCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGCCTAATGGATCAACCA > NC_000913/3705952‑3706147 | gcTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAgc > 1:1298443/1‑100 (MQ=255) ttGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCa > 1:1352490/1‑100 (MQ=255) atttgtaggCCGGATAAGGCGTTTACGCCGCATCCGGCCTACAAATTC‑TGCAAATTCAACAAATTGC‑‑GAATCCCTTGTAGGCCTGATAAGCGTAGCGCAt > 1:802141/9‑100 (MQ=18) tttgtaggCCGGATAAGGCGTTCACGCCGCATCCGGCCTACAAAATTGTGTAAATTCAATAAATTGAT‑CGAT‑CCACGTAGGCCTGATAAGCGTAGCGCAt > 1:2243968/8‑100 (MQ=21) tGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCAt < 2:1751471/100‑1 (MQ=255) gTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATc < 2:555853/100‑1 (MQ=255) gTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATc < 1:1495464/100‑1 (MQ=255) tttATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCa > 1:1741771/1‑100 (MQ=255) tttATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCa < 2:658747/100‑1 (MQ=255) ttATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAg < 1:1190594/100‑1 (MQ=255) ttATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAg < 1:1481371/100‑1 (MQ=255) gtaggCCGGATAAGGCGTTTACGCCGCATCCGGCCTACAAAATCGTGCAAATTCAACATATTGCA‑‑ATTCTCTTGTAGGCCTGATAAGCGTAGCGCATCAg > 1:569326/5‑100 (MQ=18) tATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAgg < 1:69866/100‑1 (MQ=255) aggCCGGATAAGGCGTTTACGCCGCATCCGGCCTACAAAAGCATGCAAATTCAATATATTGCA‑GAGT‑TCACGTAGGCCTGATAAGCGTAGCGCATCAGGc > 1:1405477/3‑100 (MQ=17) aggCCGGATAAGGCGTTAACGCCGCATCCGGCATACAAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGc > 1:2129630/3‑100 (MQ=18) ggtcggataaggcgTTTACGCCGCATCCGGCCTACAAAAGCATGCAAATTCAATATATTGCA‑GAGT‑TCACGTAGGCCTGATAAGCGTAGCGCATCAGGCa > 1:1725949/11‑100 (MQ=17) ggCCGGATAAGGCGTTCACGCCGCATCCGGCCTACAAAGTCGTATAAATTCAATGTATTGCA‑GTTT‑ATTGGTAGGCCTGATAAGCGCAGCGCATCAGGCa > 1:1238634/2‑100 (MQ=25) ggCCGGATAAGGCGTTCACGCCGCATCCGGCCTACAAAGTCGTATAAATTCAATGTATTGCA‑GTTT‑ATTGGTAGGCCTGATAAGCGCAGCGCATCAGGCa > 1:1651901/2‑100 (MQ=25) ggCCGGATAAGGCGTTCACGCCGCATCCGGCCTACAAAAACATGCAAATTCAATAGATTGCA‑GAGA‑TTATGTAGGCCTGATAAGCGTAGCGCATCAGGCa > 1:697073/2‑100 (MQ=17) gCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCAt > 1:780720/1‑100 (MQ=255) gCCGGATAAGGCGTTCACGCCGCATCCGGCCTACAAAGTCGTATAAATTCAATGTATTGCA‑GTTT‑ATTGGTAGGCCTGATAAGCGCAGCGCATCAGGCaa > 1:1545436/1‑99 (MQ=21) ccggataaggcgTTTACGCCGCATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCA‑GAAA‑CCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCagt > 1:1237990/9‑98 (MQ=18) ccggataaggcgTTTACGCCGCATCCGGCCTACAAAAGCATGCAAATTCAATATATTGCA‑GAGT‑TCACGTAGGCCTGATAAGCGTAGCGCATCAGGCagt > 2:1319939/9‑98 (MQ=17) ccGGATAAGGCGTTCACGTCGCATCGGGTCTACAAAACCATGAAAATTCAATATATTGCA‑GCAG‑CTGTGTAGGCCTGATAAGCGTAGCGCATCAGGCagt > 2:1190519/1‑98 (MQ=14) ggataaggcgTTTACGCCGCATCCGGCCTACAAATTC‑TGCAAATTCAACAAATTGC‑‑GAATCCCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAtttgc > 2:681972/7‑98 (MQ=21) ggataaggcgTTTACGCCGCATCCGGCCTACAAAAGCGTGCAAATTCAATACATTGCA‑TGGG‑CCATGTAGGCCTGATAAGCGTAGCGCATCAGGCAattt > 2:816145/7‑100 (MQ=17) ggataaggcgTTCACGCCGCATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCA‑‑ATA‑TGACGTAGGCCTGATAAGCGTAGCGCATCAGGcgat > 1:32945/7‑94 (MQ=21) ggataaggcgTTCACGCCGCATCCGGCCTACAAAAGCATGAAAATTCAATATATTGCA‑GGAT‑CTGCGTAGGCCTGATAAGCGTAGCGCATCAGGCAgttt > 2:410041/7‑100 (MQ=17) ggataaggcgTTCACGCCGCATCCGGCCTACAAAAGCACGCAAACTCAATATATTGCA‑GAGA‑TCATGTAGGCCTGATAAGCGTAGCGCATCAGGCAattt > 2:1806817/7‑100 (MQ=14) ggataaggcgTTCACGCCGCATCCGGCCTACAAAACCTTGCTAATTCAATATATTGCAGGGAC‑TAT‑GTAGGCCTGATAAGCATAGCGCATCAGGCagctt > 2:1623479/7‑96 (MQ=18) ggataaggcgTTCACGCCGCATCCGACCCACAAAGTCTTGCAAAATCAATAAATTGCA‑GGAA‑CGATGTAGGCCTGATAAGCGTAGCGAATCAGGCaacta > 1:70169/7‑96 (MQ=21) ggATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCAtttt < 2:1907756/100‑1 (MQ=255) gataaggcgTTCACGCCGCATCCGACCCACAAAGTCTTGCAAAATCAATAAATTGCA‑GGAA‑CGATGTAGGCCTGATAAGCGTAGCGCATCAGGCaactac > 2:1801121/6‑95 (MQ=21) gataaggcgTTAACGCCGCATACAACCTACAAAAACGTGCAAATTCAATAACTTGCA‑GCAT‑ATACGTAGTCCTGATAAACGGAGCGCCTCAAGCAttttt > 2:1538096/6‑100 (MQ=9) gATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCAttttt < 1:1152144/100‑1 (MQ=255) gcggcgTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttgcc > 1:1770233/1‑100 (MQ=255) aaggcgTTCACGCCGCATCCGGCCTACAAAATCGCTTAAATTCAATATATTGCA‑CCAT‑CCTCGTAGGCCTGATAAGCGTAGCGCATCAGGCaattctgtg < 2:140165/98‑9 (MQ=25) cggcgTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttgcct < 2:1997017/100‑1 (MQ=255) cggcgTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttgcct > 2:1648661/1‑100 (MQ=255) ggcgTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttgcctt > 2:33715/1‑100 (MQ=255) gcgTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttgccttt > 1:1727334/1‑100 (MQ=255) gcgTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGAGCATCAGGCATTtttgccttt > 1:1279050/1‑100 (MQ=255) ttAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTCGTAGGCCTGATATGCGTAGCGCATCAGGCATTtttgcctttgcc < 1:1554062/100‑1 (MQ=255) aCGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATc < 2:319192/100‑1 (MQ=255) aCGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATc < 2:140808/100‑1 (MQ=255) aCGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATc < 2:604345/100‑1 (MQ=255) ctccTTATCGGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATc < 2:1764582/97‑1 (MQ=255) gCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCa > 2:1727823/1‑99 (MQ=255) gCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCa > 1:468479/1‑99 (MQ=255) cTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTc < 2:1987316/100‑1 (MQ=255) tATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCtt < 1:1220327/100‑1 (MQ=255) aTCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTg < 1:1141984/100‑1 (MQ=255) cGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTCGTAGGCCTGATAAGCGGATCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTAt < 2:802222/100‑1 (MQ=255) cGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTAt > 1:1435362/1‑100 (MQ=255) cGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTAt > 2:1212377/1‑100 (MQ=255) cGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTAt < 2:2168804/100‑1 (MQ=255) cGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTAt < 1:25037/100‑1 (MQ=255) ggCCTACAAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATg > 1:918291/1‑100 (MQ=255) ccTACAAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGc < 1:1717279/100‑1 (MQ=255) tACAAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCtt > 1:371736/1‑100 (MQ=255) aCAAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCttt > 1:1628180/1‑100 (MQ=255) aaaTCGTGCAAATTCAATACATTGCA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTaa > 1:2119284/1‑100 (MQ=255) aaTCGTGCAAATTCAATACATTGCA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAat < 1:454014/100‑1 (MQ=255) aTCGTGCAAATTCAATACATTGCA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAatt < 1:2243155/100‑1 (MQ=255) tGCAAATTCAATACATTGCA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTc < 2:1123622/100‑1 (MQ=255) cAAATTCAATACATTGCA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGa > 1:338686/1‑100 (MQ=255) cAAATTCAATACATTGCA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGa > 1:2005117/1‑100 (MQ=255) aaaTTCAATACATTGCA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGAt > 1:739278/1‑100 (MQ=255) aaTTCAATACATTGCA‑GAAT‑TTTTGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGTTATCAGTCTTGTATGGCTTTTAATTATTCGATa < 2:1063336/100‑1 (MQ=255) aTTCAATACATTGCA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATag < 1:1638917/100‑1 (MQ=255) tCAATACATTGCA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATagag < 2:637189/100‑1 (MQ=255) cATTGCA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGttt > 2:2006118/1‑100 (MQ=255) cATTGCA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGttt > 1:2044313/1‑100 (MQ=255) aTTGCA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGtttt > 2:10387/1‑100 (MQ=255) aTTGCA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGtttt < 2:1352484/100‑1 (MQ=255) tGCA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTGGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCg > 2:1246056/1‑100 (MQ=255) gCA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGa > 1:1839352/1‑100 (MQ=255) gAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGt > 2:1280182/1‑100 (MQ=255) aT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGa > 1:63250/1‑100 (MQ=255) t‑tttCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGa < 1:2148615/99‑1 (MQ=255) gTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTg > 2:2206982/1‑100 (MQ=255) gTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTg < 2:63250/100‑1 (MQ=255) gTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTg < 2:1407615/100‑1 (MQ=255) tAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGc > 2:930808/1‑100 (MQ=255) aGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGcc < 1:403495/100‑1 (MQ=255) ggCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGCCt < 2:1951618/100‑1 (MQ=255) tGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGCCTAAt > 2:1255277/1‑99 (MQ=255) tGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGCCTAATg < 2:2078198/100‑1 (MQ=255) gATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGCCTAAtag > 2:1358611/1‑98 (MQ=255) gATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGCCTAATgg > 1:506578/1‑100 (MQ=255) gATAAGCGGAGCGCATCAGGCACTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGCCTAATgg > 2:1297320/1‑100 (MQ=255) tAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGACACGTTTTCGAAGTGATGTTTGCCTAATGGAt > 2:637760/1‑100 (MQ=255) aaGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGCCTAATGGATc > 2:294298/1‑100 (MQ=255) aaGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGCCTAATGGATc < 2:65108/100‑1 (MQ=255) aGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGCCTAATGGTTCa > 2:1077256/1‑100 (MQ=255) aGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGCCTAATGGATCa > 2:1940925/1‑100 (MQ=255) aGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGCCTAATGGATCa < 2:821855/100‑1 (MQ=255) gCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGCCTAATGGATCaa > 2:649788/1‑100 (MQ=255) gCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGCCTAATGGATCaa < 1:10387/100‑1 (MQ=255) ggAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGCCTAATGGATCAAcc < 1:857949/100‑1 (MQ=255) | GCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GAAT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGCCTAATGGATCAACCA > NC_000913/3705952‑3706147 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |