| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,321,694 | (A)7→6 | coding (1652/1827 nt) | atoS → | sensory histidine kinase in two‑component regulatory system with AtoC |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,321,688 | 0 | A | . | 99.1% | 489.4 / ‑1.2 | 111 | coding (1646/1827 nt) | atoS | sensory histidine kinase in two‑component regulatory system with AtoC |
| Reads supporting (aligned to +/- strand): ref base A (0/1); new base . (71/38); total (71/40) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.55e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.83e-01 | |||||||||||
Only 100 of 120 total aligned reads displayed.
GCACGAGGGAAAATTCGCATTCAAACCTGGCAATACAGCGACTCACAACAGGCCATTTCGATAGAGGACAACGGCTGTGGCATTGATCTCTCGCTGCAAAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGTCTGGCGTTAAGTCAACGCATCATTAATGCCCATCAGGGTG > NC_000913/2321591‑2321783 | gAGGGAAAATTCGCATTCAAACCTGGCAATACAGCGACTCACAACAGGCCATTTCGATAGAGGACAATGGCTGTGGCATTGATCTCTCGCTGCaaaaaag > 1:2740351/1‑99 (MQ=255) gAGGGAAAATTCGCATTCAAACCTGGCAATACAGCGACTCACAACAGGCCATTTCGATAGAGGACAACGGCTGTGGCATTGATCTCTCGCTGCaaaaaag < 1:726961/100‑2 (MQ=255) aGGGAAAATGCGCATTCAAACCTGGCAATACAGCGACTCACAACAGGCCATTTCGATAGAGGACAACGGCTGTGGCATTGATCTCTCGCTGCaaaaaaga < 2:1457759/100‑3 (MQ=255) gggAAAATTCGCATTCAAACCTGGCAATACAGCGACTCACAACAGGCCATTTCGATAGAGGACAACGGCTGTGGCATTGATCTCTCGCTGCaaaaaagat > 1:2601192/1‑97 (MQ=255) ggAAAATTCGCATTCAAACCTGGCAATACAGCGACTCACAACAGGCCATTTCGATAGAGGACAACGGCTGTGGCATTGATCTCTCGCTGCaaaaaagatc > 2:1050664/1‑96 (MQ=255) gAAAATTCGCATTCAAACCTGGCAATACAGCGACTCACAACAGGCCATTTCGATAGAGGACAACGGCTGTGGCATTGATCTCTCGCTGC‑AAAAAAGATCt > 2:670981/1‑100 (MQ=255) aaTTCGCATTCAAACCTGGCAATACAGGGACTCACAACGGGCCATTTCGATAGAGGACAACGGCTGTGGCATTGATCTCTCGCTGC‑AAAAAAGATCTTCg < 2:1928836/100‑1 (MQ=255) aaTTCGCATTCAAACCTGGCAATACAGCGACTCACAACAGGCCATTTCGATAGAGGACAACGGCTGTGGCATTGATCTCTCGCTGC‑AAAAAAGATCTTCg > 1:2434243/1‑100 (MQ=255) aTTCGCATTCAAACCTGGCAATACAGCGACTCACAACAGGCCATTTCGATAGAGGACAACGGCTGTGGCATTGATCTCTCGCTGC‑AAAAAAGATCTTCGa > 1:2155267/1‑100 (MQ=255) tCGCATTCAAACCTGGCAATACAGCGACTCACAACAGGCCATTTCGATAGAGGACAACGGCTGTGGCATTGATCTCTCGCTGC‑AAAAAAGATCTTCGATc < 1:2210702/100‑1 (MQ=255) cATTCAAACCTGGCAATACAGCGACTCACAACAGGCCATTTCGATAGAGGACAACGGCTGTGGCATTGATCTCTCGCTGC‑AAAAAAGATCTTCGATCCCt > 2:2438145/1‑100 (MQ=255) cATTCAAACCTGGCAATACAGCGACTCACAACAGGCCATTTCGATAGAGGACAACGGCTGTGGCATTCATCTCTCGCTGC‑AAAAAAGATCTTCGATCCCt > 2:136759/1‑100 (MQ=255) aTTCAAACCTGGCAATACAGCGACTCACAACAGGCCATTTCGATAGAGGACAACGGCTGTGGCATTGATCTCTCGCTGC‑AAAAAAGATCTTCGATCCCtt > 1:1951234/1‑100 (MQ=255) aTTCAAACCTGGCAATACAGCGACTCACAACAGGCCATTTCGATAGAGGACAACGGCTGTGGCATTGATCTCTCGCTGC‑AAAAAAGATCTTCGATCCCtt > 2:2780073/1‑100 (MQ=255) aTTCAAACCTGGCAATACAGCGACTCACAACAGGCCATTTCGATAGAGGACAACGGCTGTGGCATTGATCTCTCGCTGC‑AAAAAAGATCTTCGATCCCtt > 2:2788442/1‑100 (MQ=255) ttCAAACCTGGCAATACAGCGACTCACAACAGGCCATTTCGATAGAGGACAACGGCTGTGGCGTTGATATCTCGCTGC‑AAAAAAGATCTTCGATCCCttt > 2:2053745/1‑100 (MQ=255) ttCAAACCTGGCAATACAGCGACTCACAACAGGCCATTTCGATAGAGGACAACGGCTGTGGCATTGATCTCTCGCTGC‑AAAAAAGATCTTCGATCCCttt > 1:2168668/1‑100 (MQ=255) ttCAAACCTGGCAATACAGCGACTCACAACAGGCCATTTCGATAGAGGACAACGGCTGTGGCATTGATCTCTCGCTGC‑AAAAAAGATCTTCGATCCCtt < 1:3035228/99‑1 (MQ=255) naaaCCTGGCAATACAGCGACTCACAACAGGCCATTTCGATAGAGGACAACGGCTGTGGCATTGATCTCTCGCTGC‑AAAAAAGATCTTCGATCCCttttt > 1:1345308/2‑100 (MQ=255) aaCCTGGCAATACAGCGACTCACAACAGGCCATTTCGATAGAGGACAACGGCTGTGGCATTGATCTCTCGCTGC‑AAAAAAGATCTTCGATCCCTTTTTca < 1:235247/100‑1 (MQ=255) aaCCTGGCAATACAGCGACTCACAACAGGCCATTTCGATAGAGGACAACGGCTGTGGCATTGATCTCTCGCTGC‑AAAAAAGATCTTCGATCCCTTTTTca > 1:1205664/1‑100 (MQ=255) aCCTGGCAATACAGCGACTCACAACAGGCCATTTCGATAGAGGACAACGGCTGTGGCATTGATCTCTCGCTGC‑AAAAAAGATCTTCGATCCCTTTTTcac > 2:2716752/1‑100 (MQ=255) ccTGGCAATACAGCGACTCACAACAGGCCATTTCGATAGAGGACAACGGCTGTGGCATTGATCTCTCGCTGC‑AAAAAAGATCTTCGATCCCTTTTTcacc > 2:764785/1‑100 (MQ=255) ccTGGCAATACAGCGACTCACAACAGGCCATTTCGATAGAGGACAACGGCTGTGGCATTGATCTCTCGCTGC‑AAAAAAGATCTTCGATCCCTTTTTcacc < 1:1231414/100‑1 (MQ=255) ccTGGAAATACAGCGACTCACAACAGGCCATTTCGATAGAGGACAACGGCTGTGGCATTGATCTAAAGAAGC‑AAAAAAGATCTTCGATCCCTTTTTcacc < 2:820627/100‑1 (MQ=255) tGGCAATACAGCGACTCACAACAGGCCATTTCGATAGAGGACAACGGCTGTGGCATTGATCTCTCGCTGC‑AAAAAAGATCTTCGATCCCTTTTTcaccac > 1:2410448/1‑100 (MQ=255) cAATACAGCGACTCACAACAGGCCATTTCGATAGAGGACAACGGCTGTGGCATTGATCTCTCGCTGC‑AAAAAAGATCTTCGATCCCTTTTTCACCACCaa > 1:628269/1‑100 (MQ=255) cAATACAGCGACTCACAACAGGCCATTTCGATAGAGGACAACGGCTGTGGCATTGATCTCTCGCTG‑TAAAAAAGATCTTCGATCCCTTTTTCACCACCaa < 1:297318/100‑1 (MQ=255) aTACAGCGACTCGCAACAGGCCATTTCGATAGAGGACAACGGCTGTGGCATTGATCTCTCGCTGC‑AAAAAAGATCTTCGATCCCTTTTTCACCACCAAAg > 1:2000422/1‑100 (MQ=255) tACAGCGACTCACAACAGGCCATTTCGATAGAGGACAACGGCTGTGGCATTGATCTCTCGCTGC‑AAAAAAGATCTTCGATCCCTTTTTca > 2:2641159/1‑90 (MQ=255) aCAGCGACTCACAACAGGCCATTTCGATAGAGGACAACGGCTGTGGCATTGATCTCTCGCTGC‑AAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGcc > 2:2971715/1‑100 (MQ=255) cAGCGACTCACAACAGGCCATTTCGATAGAGGACAACGGCTGTGGCATTGATCTCTCGCTGC‑AAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCt > 1:2393093/1‑100 (MQ=255) gCGACTCACAACAGGCCATTTCGATAGAGGACAACGGCTGTGGCATTGATCTCTCGCTGC‑AAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCa < 1:2788481/100‑1 (MQ=255) cGACTCACAACAGGCCATTTCGATAGAGGACAACGGCTGTGGCATTGATCTCTCGCTGC‑AAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAg < 2:459889/100‑1 (MQ=255) cGACTCACAACAGGCCATTTCGATAGAGGACAACGGCTGTGGCATTGATCTCTCGCTGC‑AAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAg < 2:2410416/100‑1 (MQ=255) cGACTCACAACAGGCCATTTCGATAGAGGACAACGGCTGTGGCATTGATCTCTCGCTGC‑AAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAg < 2:2098639/100‑1 (MQ=255) gACTCACAACAGGCCATTTCGATAGAGGACAACGGCTGTGGCATTGATCTCTCGCTGCAAAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAg < 1:2493640/100‑1 (MQ=255) gACTCACAACAGGCCATTTCGATAGAGGACAACGGCTGTGGCATTGATCTCTCGCTGC‑AAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAgg > 1:2824931/1‑100 (MQ=255) aCTCACAACAGGCCATTTCGATAGAGGACAACGGCTGTGGCATTGATCTCTCGCTGC‑AAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGGa < 2:205378/100‑1 (MQ=255) cTCACAACAGGCCATTTCGATAGAGGACAACGGCTGTGGCATTGATCTCTCGCTGC‑AAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGaaa > 1:1818556/1‑100 (MQ=255) tCACAACAGGCCATTTCGATAGAGGACAACGGCTGTGGCATTGATCTCTCGCTGC‑AAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGTAAc > 2:561970/1‑100 (MQ=255) cacaACAGGCCATTTCGATAGAGGACAACGGCTGTGGCATTGATCTCTCGCTGC‑AAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGGAAcc > 2:1463835/1‑100 (MQ=255) cacaACAGGCCATTTCGATAGAGGACAACGGCTGTGGCATTGATCTCTCGCTGC‑AAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGGAAcc > 2:285693/1‑100 (MQ=255) cacaACAGGCCATTTCGATAGAGGACAACGGCTGTGGCATTGATCTCTCGCTGC‑AAAAAAGATCTTCGATCCC‑TTTTCACCACCAAAGCCTCAGGAAcc > 2:2630111/1‑99 (MQ=255) aacaGGCCATTTCGATAGAGGACAACGGCTGTGGCATTGATCTCTCGCTGC‑AAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGGAACCggg < 1:1832112/100‑1 (MQ=255) caGGCCAATTCTATAGAGGACAACGGCTGTGGCATTGATCTCTCGCTGC‑AAAAAAGATCTTCGATACCTTTTTCACCACCAAAGCCTCAGGAACCGGGCt > 2:1611775/1‑100 (MQ=255) ggCCATTTCGATAGAGGACAACGGCTGTGGCATTGATCTCTCGCTGC‑AAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTg > 1:13649/1‑100 (MQ=255) gCCATTTCGATAGAGGACAACGGCTGTGGCATTGATCTCTCGCTGC‑AAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTgg > 2:507033/1‑100 (MQ=255) gCCATTTCGATAGAGGACAACGGCTGTGGCATTGATCTCTCGCTGC‑AAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTgg < 2:148698/100‑1 (MQ=255) gCCATTTCGATAGAGGACAACGGCTGTGGCATTGATCTCTCGCTGC‑AAAAAAGATCTTCGATCCCTTTTTCACCACAAAAGCCTCAGGAACCGGGCTTgg < 1:664407/100‑1 (MQ=255) gCCATTTCGATAGAGGACAACGGCTGTGGCATTGATCTCTCGCTGC‑AAAAAAGATCTTCGATCCCTTTTTCACCACAAAAGCCTCAGGAACCGGGCTTgg < 1:670989/100‑1 (MQ=255) cATTTCGATAGAGGACAACGGCTGTGGCATTGATCTCTCGCTGC‑AAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGTc < 2:2393062/100‑1 (MQ=255) tttCGATAGAGGACAACGGCTGTGGCATTGATCTCTCGCTGC‑AAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGTCTg < 2:71969/100‑1 (MQ=255) ttCGATAGAGGACAACGGCTGTGGCATTGATCTCTCGCTGC‑AAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGTCTgg < 1:173380/100‑1 (MQ=255) cGATAGAGGACAACGGCTGTGGCATTGATCTCTCGCTGC‑AAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGTCTGGCg < 2:940882/100‑1 (MQ=255) cGATAGAGGACAACGGCTGTGGCATTGATCTCTCGCTGC‑AAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGTCTGGCg > 1:1138704/1‑100 (MQ=255) aTAGAGGACAACGGCTGTGGCATTGATCTCTCGCTGC‑AAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGTCTGGCGtt > 2:828975/1‑100 (MQ=255) aTAGAGGACAACGGCTGTGGCATTGATCTCTCGCTGC‑AAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGTCTGGCGtt < 2:705863/100‑1 (MQ=255) aTAGAGGACAACGGCTGTGGCATTGATCTCTCGCTGC‑AAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGTCTGGCGtt > 2:1623260/1‑100 (MQ=255) tAGAGGACAACGGCTGTGGCATTGATCTCTCGCTGC‑AAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGTCTGGCGTTa > 1:2991561/1‑100 (MQ=255) gagGACAACGGCTGTGGCATTGATCTCTCGCTGC‑AAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGTCTGGCGTTAAg > 2:1169484/1‑100 (MQ=255) ggACAACGGCTGTGGCATTGATCTCTCGCTGC‑CAAAAAGCTCTTCGATCCCTTTTTCACCCCCAAAGCCTCAGGAACCGGGCTTTGTCTGGCGTTAAGTc > 2:820596/1‑100 (MQ=255) ggACAACGGCTGTGGCATTGATCTCTCGCTGC‑CAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGTCTGGCGTTAAGTc > 1:2895582/1‑100 (MQ=255) ggACAACGGCTGTGGCATTGATCTCTCGCTGC‑AAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGTCTGGCGTTAAGTc > 2:2240598/1‑100 (MQ=255) ggACAACGGCTGTGGCATTGATCTCTCGCTGC‑AAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGTCTGGCGTTAAGTc > 1:1247413/1‑100 (MQ=255) ggACAACGGCTGTGGCATTGATCTCTCGCTGC‑AAAAAAGATCTTCGACCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGTCTGGCGTTAAGTc < 2:2409751/100‑1 (MQ=255) aCAACGGCTGTGGCATTGATCTCTCGCTGC‑AAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGTCTGGCGTTAAGTCaa > 2:930105/1‑100 (MQ=255) aaCGGCTGTGGCATTGATCTCTCGCTGC‑AAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGTCTGGCGTTAAGTCAACg < 2:1938027/100‑1 (MQ=255) aCGGCTGTGGCATTGATCTCTCGCTGC‑AAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGTCTGGCGTTAAGTCAACGc > 2:1807045/1‑100 (MQ=255) cGGCTGTGGCATTGATCTCTCGCTGC‑AAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGTCTGGCGTTAAGTCAACGca < 2:1630367/100‑1 (MQ=255) cGGCTGTGGCATTGATCTCTCGCTGC‑AAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGTCTGGCGTTAAGTCAACGca < 2:653428/100‑1 (MQ=255) ggCTGTGGCATTGATCTCTCGCTGC‑AAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGGACCCGGGCTTGGTCTGGCGTTAAGTCAACGcat > 1:2898642/1‑100 (MQ=255) ggCTGTGGCATTGATCTCTCGCTGC‑AAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGTCTGGCGTTAAGTCAACGcat > 1:1983110/1‑100 (MQ=255) ggCTGTGGCATTGATCTCTCGCTGC‑AAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGTCTGGCGTTAAGTCAACGcat > 1:2791957/1‑100 (MQ=255) gCTGTGGCATTGATCTCTCGCTGC‑AAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGTCTGGCGTTAAGTCAACGcatc > 2:2780819/1‑100 (MQ=255) gtgGCATTGATCTCTCGCTGC‑AAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGTCTGGCGTTAAGTCAACGCATCAtt > 2:2823736/1‑100 (MQ=255) tgGCATTGATCTCTCGCTGC‑AAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGTCTGGCGTTAAGTCAACGCATCATTa < 2:2038076/100‑1 (MQ=255) tgGCATTGATCTCTCGCTGC‑‑AAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGTCTGGCGTTAAGTCAACGCATCATTaa < 2:3026162/100‑1 (MQ=255) ggCATTGATCTCTCGCTGC‑AAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGTCTGGCGTTAAGTCAACGCATCATTaa > 1:2082500/1‑100 (MQ=255) ggCATTGATCTCTCGCTGC‑AAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGTCTGGCGTTAAGTCAACGCATCATTaa > 1:2189639/1‑100 (MQ=255) gCATTGATCTCTCGCTGC‑AAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGTCTGGCGTTAAGTCAACGCATCATTAAt > 2:2619996/1‑100 (MQ=255) gCATTGATCTCTCGCTGC‑AAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGTCTGGCGTTAAGTCAACGCATCATTAAt > 2:2267043/1‑100 (MQ=255) cATTGATCTCTCGCTGC‑AAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGTCTGGCGTTAAGTCAACGCATCATTAATg < 2:2601155/100‑1 (MQ=255) cATTGATCTCTCGCTGC‑AAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGTCTGGCGTTAAGTCAACGCATCATTAATg < 1:1631602/100‑1 (MQ=255) aTTGATCTCTCGCTGC‑AAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGTCTGGCGTTAAGTCAACGCATCATTAATGc > 2:42715/1‑100 (MQ=255) ttGATCTCTCGCTGC‑AAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGTCTGGCGTTAAGTCAACGCATCATTAATGcc < 2:2708303/100‑1 (MQ=255) tGATCTCTCGCTGC‑AAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGTCTGGCGTTAAGTCAACGCATCATTAATGccc > 1:138145/1‑100 (MQ=255) aTCTCTCGCTGC‑AAAAAAGATCTTCGATCCCTTTTTTATCACTTAAGCCTCAGGAACCGGGCTTGGTCTGGCGTTAAGTCAACGCATCATTAATGCCCAt > 2:2600707/1‑100 (MQ=255) tctcGCTGC‑AAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGTCTGGCGTTAAGTCAACGCATCATTAATGCCCATCAg > 1:2440968/1‑100 (MQ=255) tctcGCTGC‑AAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGTCTGGCGTTAAGTCAACGCATCATTAATGCCCATCAg > 2:2965729/1‑100 (MQ=255) tctcGCTGC‑AAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGTCTGGCGTTAAGTCAACGCATCATTAATGCCCATCAg > 1:464373/1‑100 (MQ=255) ctcGCTGC‑AAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGTCTGGCGTTAAGTCAACGCATCATTAATGCCCATCAgg > 1:2738029/1‑100 (MQ=255) ctcGCTGC‑AAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGTCTGGCGTTAAGTCAACGCATCATTAATGCCCATCAgg > 1:768194/1‑100 (MQ=255) cGCTGC‑AAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGTCTGGCGTTAAGTCAACGCATCATTAATGCCCATCAGGGt > 1:2925558/1‑100 (MQ=255) cGCTGC‑AAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGTCTGGCGTTAAGTCAACGCATCATTAATGCCCATCAGGGt < 1:2750674/100‑1 (MQ=255) cGCTGC‑AAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGTCTGGCGTTAAGTCAACGCATCATTAATGCCCATCAGGGt < 2:768187/100‑1 (MQ=255) cGCTGC‑AAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGTCTGGCGTTAAGTCAACGCATCATTAATGCCCATCAGGGt < 1:1050675/100‑1 (MQ=255) gCTGC‑AAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGTCTGGCGTTAAGTCAACGCATCATTAATGCCCATCAgggcg < 1:2823775/100‑3 (MQ=255) gCTGC‑AAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGTCTGGCGTTAAGTCAACGCATCATTAATGCCCATCAGGGTg > 1:431338/1‑100 (MQ=255) gCTGC‑AAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGTCTGGCGTTAAGTCAACGCATCATTAATGCCCATCAGGGTg < 1:791929/100‑1 (MQ=255) | GCACGAGGGAAAATTCGCATTCAAACCTGGCAATACAGCGACTCACAACAGGCCATTTCGATAGAGGACAACGGCTGTGGCATTGATCTCTCGCTGCAAAAAAAGATCTTCGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGTCTGGCGTTAAGTCAACGCATCATTAATGCCCATCAGGGTG > NC_000913/2321591‑2321783 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |