Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 220,849 (T)5→4 coding (80/816 nt) metQ ← DL‑methionine transporter subunit

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913220,8450T.99.0% 468.0 / ‑2.5 104coding (84/816 nt)metQDL‑methionine transporter subunit
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base . (53/50);  minor base C (1/0);  total (54/50)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 109 total aligned reads displayed.

AACGTCCAGGCCATATTTGTCTTTCGCAACTTTCTGCGCGACTTCTGCAACCTGCTGTTCGGCACCAACAATCACGCCGACTTTAATGTGGTTTGGATCTTTTTCATCCTGACCGCAGCCTACCAGTGCCAGTGATCCGATCAGGGCTCCCACTGCCGCAAAGGTTTTGAATTTGAACGCCATACCTTATTCCTT  >  NC_000913/220746‑220940
                                                                                                   |                                                                                               
aaCGTCCAGGCCATATTTGTCTTTCGCAACTTTCTGCGCGACTTCTGCAACCTGCTGTTCGGCACCAACAATCACGCCGACTTTAATGTGGTTTGGATCt                                                                                                 <  1:1083563/100‑1 (MQ=255)
   gTCCAGGCCATATTTGTCTTTCGCAACTTTCTGCGCGACTTCTGCAACCTGCTGTTCGGCACCAACAATCACGCCGACTTTAATGTGGTTTGGATCtttt                                                                                              <  1:3033183/100‑1 (MQ=255)
   gTCCAGGCCATATTTGTCTTTCGCAACTTTCTGCGCGACTTCTGCAACCTGCTGTTCGGCACCAACAATCACGCCGACTTTAATGTGGTTTGGATCtttt                                                                                              <  2:181390/100‑1 (MQ=255)
     ccAGGCCATATTTGTCTTTCGCAACTTTCTGCGCGACTTCTGCAACCTGCTGTTCGGCACCAACAATCACGCCGACTTTAATGTGGTTTGGATCttttca                                                                                            <  2:2197534/100‑3 (MQ=255)
        ggCCATATTTGTCTTTCGCAACTTTCTGCGCGACTTCTGCAACCTGCTGTTCGGCACCAACAATCACGCCGACTTTAATGTGGTTTGGATCTTTTCATcc                                                                                        <  1:1045905/100‑1 (MQ=255)
        ggCCATATTTGTCTTTCGCAACTTTCTGCGCGACTTCTGCAACCTGCTGTTCGGCACCAACAATCACGCCGACTTTAATGTGGTTTGGATCTTTTCATcc                                                                                        >  2:2883251/1‑100 (MQ=255)
        ggCCATATTTGTCTTTCGCAACTTTCTGCGCGACTTCTGCAACCTGCTGTTCGGCACCAACAATCACGCCGACTTTAATGTGGTTTGGATCTTTTCATcc                                                                                        >  1:2880266/1‑100 (MQ=255)
        ggCCATATTTGTCTTTCGCAACTTTCTGCGCGACTTCTGCAACCTGCTGTTCGGCACCAACAATCACGCCGACTTTAATGTGGTTTGGATCTTTTCATcc                                                                                        >  1:72812/1‑100 (MQ=255)
        ggCCATATTTGTCTTTCGCAACTTTCTGCGCGACTTCTGCAACCTGCTGTTCGGCACCAACAATCACGCCGACTTTAATGTGGTTTGGATCTTTTCATcc                                                                                        >  2:148464/1‑100 (MQ=255)
        ggCCATATTTGTCTTTCGCAACTTTCTGCGCGACTTCTGCAACCTGCTGTTCGGCACCAACAATCACGCCGACTTTAATGTGGTTTGGATCTTTTCATcc                                                                                        <  2:1981330/100‑1 (MQ=255)
         gCCATATTTGTCTTTCGCAACTTTCTGCGCGACTTCTGCAACCTGCTGTTCGGCACCAACAATCACGCCGACTTTAATGTGGTTTGGATCTTTTCATCCt                                                                                       >  2:5181/1‑100 (MQ=255)
         gCCATATTTGTCTTTCGCAACTTTCTGCGCGACTTCTGCAACCTGCTGTTCGGCACCAACAATCACGCCGACTTTAATGTGGTTTGGATCTTTTCATCCt                                                                                       <  1:1108277/100‑1 (MQ=255)
            atatTTGTCTTTCGCAACTTTCTGCGCGACTTCTGCAACCTGCTGTTCGTCACCAACAATCACGCCGACTTTAATGTGGTTTGGATCTTTTCATCCTGAc                                                                                    <  2:2765399/100‑1 (MQ=255)
            atatTTGTCTTTCGCAACTTTCTGCGCGACTTCTGCAACCTGCTGTTCGGCACCAACAATCACGCCGACTTTAATGTGGTTTGGATCTTTTCATCCTGAc                                                                                    <  2:2438367/100‑1 (MQ=255)
             tatTTGTCTTTCGCAACTTTCTGCGCGACTTCTGCAACCTGCTGTTCGGCACCAACAATCACGCCGACTTTAATGTGGTTTGGATCTTTTCATCCTGAcc                                                                                   >  1:2447318/1‑100 (MQ=255)
             tatTTGTCTTTCGCAACTTTCTGCGCGACTTCTGCAACCTGCTGTTCGGCACCAACAATCACGCCGACTTTAATGTGGTTTGGATCTTTTCATCCTGAcc                                                                                   >  1:2425476/1‑100 (MQ=255)
             tatTTGTCTTTCGCAACTTTCTGCGCGACTTCTGCAACCTGCTGTTCGGCACCAACAATCACGCCGACTTTAATGTGGTTTGGATCTTTTCATCCTGAcc                                                                                   <  2:2922072/100‑1 (MQ=255)
                ttGTCTTTCGCAACTTTCTGCGCGACTTCTGCAACCTGCTGTTCGGCACCAACAATCACGCCGACTTTAATGTGGTTTGGATCTTTTCATCCTGACCGCa                                                                                >  1:214362/1‑100 (MQ=255)
                 tGTCTTTCGCAACTTTCTGCGCGACTTCTGCAACCTGCTGTTCGGCACCAACAATCACGCCGACTTTAATGTGGTTTGGATCTTTTCATCCTGACCGCAg                                                                               <  2:1851619/100‑1 (MQ=255)
                 tGTCTTTCGCAACTTTCTGCGCGACTTCTGCAACCTGCTGTTCGGCACCAACAATCACGCCGACTTTAATGTGGTTTGGATCTTTTCATCCTGACCGCAg                                                                               <  1:1802487/100‑1 (MQ=255)
                  gTCTTTCGCAACTTTCTGCGCGACTTCTGCAACCTGCTGTTCGGCACCAACAATCACGCCGACTTTAATGTGGTTTGGATCTTTTCATCCTGACCGCAGc                                                                              <  1:389411/100‑1 (MQ=255)
                  gTCTTTCGCAACTTTCTGCGCGACTTCTGCAACCTGCTGTTCGGCACCAACAATCACGCCGACTTTAATGTGGTTTGGATCTTTTCATCCTGACCGCAGc                                                                              >  2:2363441/1‑100 (MQ=255)
                   tCTTTCGCATCTTTCTGCGCGATTTCTGCAACCTGCTGTTCGTCACCCACAATCACGCCGACCTTATTGTTGTTTGGATCTTTTCATCCGGACTGCAGc                                                                              >  2:2245284/1‑99 (MQ=255)
                    cTTTCGCAACTTTCTGCGCGACTTCTGCAACCTGCTGTTCGGCCCCAACAATCCCGCCGACTTTAATGTGGTTTGGATCTTTTCATCCTGACCGCATcc                                                                             <  2:1779962/99‑1 (MQ=255)
                    cTTTCGCAACTTTCTGCGCGACTTCTGCAACCTGCTGTTCGGCACCAACAATCACGCCGACTTTAATGTGGTTTGGATCTTTTCATCCTGACCGCAGCCt                                                                            >  1:2575737/1‑100 (MQ=255)
                    cTTTCGCAACTTTCTGCGCGACTTCTGCAACCTGCTGTTCGGCACCAACAATCACGCCGACTTTAATGTGGTTTGGATCTTTTCATCCTGACCGCAGCCt                                                                            >  1:2313002/1‑100 (MQ=255)
                     tttCGCAACTTTCTGCGCGACTTCTGCAACCTGCTGTTCGGCACCAACAATCACGCCGACTTTAATGTGGTTTGGATCTTTTCATCCTGACCCCAGCCTa                                                                           <  1:1603472/100‑1 (MQ=255)
                      ttCGCAACTTTCTGCGCGACTTCTGCAACCTGCTGTTCGGCACCAACAATCACGCCGACTTTAATGTGGTTTGGATCTTTTCATCCTGACCGCAGCCTAc                                                                          <  2:1118920/100‑1 (MQ=255)
                       tCGCAACTTTCTGCGCGACTTCTGCAACCTGCTGTTCGGCACCAACAATCACGCCGACTTTAATGTGGTTTGGATCTTTTCATCCTGACCGCAGCCTAcc                                                                         <  2:2099397/100‑1 (MQ=255)
                       tCGCAACTTTCTGCGCGACTTCTGCAACCTGCTGTTCGGCACCAACAATCACGCCGACTTTAATGTGGTTTGGATCTTTTCATCCTGACCGCAGCCTAcc                                                                         <  1:1443260/100‑1 (MQ=255)
                       tCGCAACTTTCTGCGCGACTTCTGCAACCTGCTGTTCGGCACCAACAATCACGCCGACTTTAATGTGGTTTGGATCTTTTCATCCTGACCGCAGCCTAcc                                                                         <  1:2093778/100‑1 (MQ=255)
                       tCGCAACTTTCTGCGCGACTTCTGCAACCTGCTGTTCGGCACCAACAATCACGCCGACTTTAATGTGGTTTGGAACTTTTCATCCTGACCGCAGCCTAcc                                                                         >  1:82232/1‑100 (MQ=255)
                         gCAACTTTCTGCGCGACTTCTGCAACCTGCTGTTCGGCACCAACAATCACGCCGACTTTAATGTGGTTTGGATCTTTTCATCCTGCCCGCAGCCTAccag                                                                       >  2:2471231/1‑100 (MQ=255)
                         gCAACTTTCTGCGCGACTTCTGCAACCTGCTGTTCGGCACCAACAATCACGCCGACTTTAATGTGGTTTGGATCTTTTCATCCTGACCGCAGCCTAccag                                                                       <  2:2406105/100‑1 (MQ=255)
                         gCAACTTTCTGCGCGACTTCTGCAACCTGCTGTTCGGCACCAACAATCACGCCGACTTTAATGTGGTTTGGATCTTTTCATCCTGACCGCAGCCTAccag                                                                       <  1:2969958/100‑1 (MQ=255)
                            aCTTTCTGCGCGACTTCTGCAACCTGCTGTTCGGCACCAACAATCACGCCGACTTTAATGTGGTTTGGATCTTTTCATCCTGACCGCAGCCTAccagtgc                                                                    >  2:2967187/1‑100 (MQ=255)
                            aCTTTCTGCGCGACTTCTGCAACCTGCTGTTCGGCACCAACAATCACGCCGACTTTAATGTGGTTTGGATCTTTTCATCCTGACCGCAGCCTAccagtgc                                                                    >  1:1320222/1‑100 (MQ=255)
                            aCTTTCTGCGCGACTTCTGCAACCTGCTGTTCGGCACCAACAATCACGCCGACTTTAATGTGGTTTGGATCTTTTCATCCTGACCGCAGCCTAccagtgc                                                                    <  2:2408089/100‑1 (MQ=255)
                             cTTTCTGCGCGACTTCTGCAACCTGCTGTTCGGCACCAACAATCACGCCGACTTTAATGTGGTTTGGATCTTTTCATCCTGACCGCAGCCTAccagtgcc                                                                   >  2:1658572/1‑100 (MQ=255)
                               ttCTGCGCGACTTCTGCAACCTGCTGTTCGGCACCAACAATCACGCCGACTTTAATGTGGTTTGGATCTTTTCATCCTGACCGCAGCCTAccagtgccag                                                                 <  1:134484/100‑1 (MQ=255)
                                tCTGCGCGACTTCTGCAACCTGCTGTTCGGCACCAACAATCACGCCGACTTTAATGTGGTTTGGATCTTTTCATCCTGACCGCAGCCTAccagtgccagt                                                                <  2:2237674/100‑1 (MQ=255)
                                tCTGCGCGACTTCTGCAACCTGCTGTTCGGCACCAACAATCACGCCGACTTTAATGTGGTTTGGATCTTTTCATCCTGACCGCAGCCTAccagtgccagt                                                                <  1:102557/100‑1 (MQ=255)
                                tCTGCGCGACTTCTGCAACCTGCTGTTCGGCACCAACAATCACGCCGACTTTAATGTGGTTTGGATCTTTTCATCCTGACCGCAGCCTAccagtgccagt                                                                <  2:1581043/100‑1 (MQ=255)
                                tCTGCGCGACTTCTGCAACCTGCTGTTCGGCACCAACAATCACGCCGACTTTAATGTGGTTTGGATCTTTTCATCCTGACCGCAGCCTAccagtgccagt                                                                <  2:2223513/100‑1 (MQ=255)
                                    cgcgACTTCTGCAACCTGCTGTTCGGCACCAACAATCACGCCGACTTTAATGTGGTTTGGATCTTTTCATCCTGACCGCAGCCTACCAGTGCCAGTGATc                                                            <  1:1645985/100‑1 (MQ=255)
                                    cgcgACTTCTGCAACCTGCTGTTCGGCACCAACAATCACGCCGACTTTAATGTGGTTTGGATCTTTTCATCCTGACCGCAGCCTACCAGTGCCAGTGATc                                                            >  1:1898981/1‑100 (MQ=255)
                                     gcgACTTCTGCAACCTGCTGTTCGGCACCAACAATCACGCCGACTTTAATGTGGTTTGGATCTTTTCATCCTGACCGCAGCCTACCAGTGCCAGTGATcc                                                           >  1:106283/1‑100 (MQ=255)
                                          ttCTGCAACCTGCTGTTCGGCACCAACAATCACGCCGACTTTAATGTGGTTTGGATCTTTTCATCCTGACCGCAGCCTACCAGTGCCAGTGATCCGATCa                                                      <  2:849495/100‑1 (MQ=255)
                                          ttCTGCAACCTGCTGTTCGGCACCAACAATCACGCCGACTTTAATGTGGTTTGGATCTTTTCATCCTGACCGCAGCCTACCAGTGCCAGTGATCCGATCa                                                      <  1:1721280/100‑1 (MQ=255)
                                          ttCTGCAACCTGCTGTTCGGCACCAACAATCACGCCGACTTTAATGTGGTTTGGATCTTTTCATCCTGACCGCAGCCTACCAGTGCCAGTGATCCGATCa                                                      <  1:2857838/100‑1 (MQ=255)
                                              gCAACCTGCTGTTCGGCACCAACAATCACGCCGACTTTAATGTGGTTTGGATCTTTTCATCCTGACCGCAGCCTACCAGTGCCAGTGATCCGATCAGGGc                                                  >  1:598151/1‑100 (MQ=255)
                                              gCAACCTGCTGTTCGGCACCAACAATCACGCCGACTTTAATGTGGTTTGGATCTTTTCATCCTGACCGCAGCCTACCAGTGCCAGTGATCCGATCAGGGc                                                  >  2:1025234/1‑100 (MQ=255)
                                              gCAACCTGCTGTTCGGCACCAACAATCACGCCGACTTTAATGTGGTTTGGATCTTTTCATCCTGACCGCAGCCTACCAGTGCCAGTGATCCGATCAGGGc                                                  >  2:1557188/1‑100 (MQ=255)
                                                  ccTGCTGTTCGGCACCAACAATCACGCCGACTTTAATGTGGTTTGGATCTTTTCATCCTGACCGCAGCCTACCAGTGCCAGTGATCCGATCAGGGCTccc                                              >  1:2938209/1‑100 (MQ=255)
                                                    tgctgTTCGGCACCAACAATCACGCCGACTTTAATGTGGTTTGGATCTTTTCATCCTGACCGCAGCCTACCAGTGCCAGTGATCCGATCAGGGCTCCCAc                                            >  1:1328299/1‑100 (MQ=255)
                                                     gctgTTCGGCACCAACAATCACGCCGACTTTAATGTGGTTTGGATCTTTTCATCCTGACCGCAGCCTACCAGTGCCAGTGATCCGATCAGGGCTCCCACt                                           <  1:276645/100‑1 (MQ=255)
                                                       tgTTCGGCACCAACAATCACGCCGACTTTAATGTGGTTTGGATCTTTTCATCCTGACCGCAGCCTACCAGTGCCAGTGATCCGATCAGGGCTCCCACTGc                                         <  1:2442651/100‑1 (MQ=255)
                                                        gTTCGGCACCAACAATCACGCCGACTTTAATGTGGTTTGGATCTTTTCATCCTGACCGCAGCCTACCAGTGCCAGTGATCCGATCAGGGCTCCCACTGcc                                        >  2:14396/1‑100 (MQ=255)
                                                        gTTCGGCACCAACAATCACGCCGACTTTAATGTGGTTTGGATCTTTTCATCCTGACCGCAGCCTACCAGTGCCAGTGATCCGATCAGGGCTCCCACTGcc                                        <  1:1101197/100‑1 (MQ=255)
                                                         ttCGGCACCAACAATCACGCCGACTTTAATGTGGTTTGGATCTTTTCATCCTGACCGCAGCCTACCAGTGCCAGTGATCCGATCAGGGCTCCCACTGCCg                                       <  1:1571892/100‑1 (MQ=255)
                                                           cGGCACCAACAATCACGCCGACTTTAATGTGGTTTGGATCTTTTCATCCTGACCGCAGCCTACCAGTGCCAGTGATCCGATCAGGGCTCCCACTGCCGCa                                     <  2:1619374/100‑1 (MQ=255)
                                                            ggCACCAACAATCACGCCGACTTTAATGTGGTTTGGATCTTTTCATCCTGACCGCAGCCTACCAGTGCCAGTGATCCGATCAGGGCTCCCACTGCCGCaa                                    >  2:493596/1‑100 (MQ=255)
                                                            ggCACCAACAATCACGCCGACTTTAATGTGGTTTGGATCTTTTCATCCTGACCGCAGCCTACCAGTGCCAGTGATCCGATCAGGGCTCCCACTGCCGCaa                                    <  1:1318054/100‑1 (MQ=255)
                                                             gCACCAACAATCACGCCGACTTTAATGTGGTTTGGATCTTTTCATCCTGACCGCAGCCTACCAGTGCCAGTGATCCGATCAGGGCTCCCACTGCCGCaaa                                   >  1:2740317/1‑100 (MQ=255)
                                                                ccAACAATCACGCCGACTTTAATGTGGTTTGGATCTTTTCATCCTGACCGCAGCCTACCAGTGCCAGTGATCCGATCAGGGCTCCCACTGCCGCAAAGGt                                >  2:309555/1‑100 (MQ=255)
                                                                ccAACAATCACGCCGACTTTAATGTGGTTTGGATCTTTTCATCCTGACCGCAGCCTACCAGTGCCAGTGATCCGATCAGGGCTCCCACTGCCGCAAAGGt                                >  1:1529255/1‑100 (MQ=255)
                                                                ccAACAATCACGCCGACTTTAATGTGGTTTGGACCTTTTCATCCTGACCGCAGCCTACCAGTGCCAGTGATCCGATCAGGGCTCCCACTGCCGCAAAGGt                                >  2:2011434/1‑100 (MQ=255)
                                                                    caaTCACGCCGACTTTAATGTGGTTTGGATCTTTTCATCCTGACCGCAGCCTACCAGTGCCAGTGATCCGATCAGGGCTCCCACTGCCGCAAAGGTtttg                            >  2:575994/1‑100 (MQ=255)
                                                                    caaTCACGCCGACTTTAATGTGGTTTGGATCTTTTCATCCTGACCGCAGCCTACCAGTGCCAGTGATCCGATCAGGGCTCCCACTGCCGCAAAGGTtttg                            >  1:268041/1‑100 (MQ=255)
                                                                      aTCACGCCGACTTTAATGTGGTTTGGATCTTTTCATCCTGACCGCAGCCTACCAGTGCCAGTGATCCGATCAGGGCTCCCACTGCCGCAAAGGTtttgaa                          <  2:2343968/100‑1 (MQ=255)
                                                                       tCACGCCGACTTTAATGTGGTTTGGATCTTTTCATCCTGACCGCAGCCTACCAGTGCCAGTGATCCGATCAGGGCTCCCACTGCCGCAAAGGTtttgaat                         <  2:1394136/100‑1 (MQ=255)
                                                                        cACGCCGACTTTAATGTGGTTTGGATCTTTTCATCCTGACCGCAGCCTACCAGTGCCAGTGATCCGATCAGGGCTCCCACTGCCGCAAAGGTtttgaatt                        <  1:1658591/100‑1 (MQ=255)
                                                                        cACGCCGACTTTAATGTGGTTTGGATCTTTTCATCCTGACCGCAGCCTACCAGTGCCAGTGATCCGATCAGGGCTCCCACTGCCGCAAAGGTtttgaatt                        >  2:1076669/1‑100 (MQ=255)
                                                                         aCGCCGACTTTAATGTGGTTTGGATCTTTTCATCCTGACCGCAGCCTACCAGTGCCAGTGATCCGATCAGGGCTCCCACTGCCGCAAAGGTtttgaattt                       >  1:1605104/1‑100 (MQ=255)
                                                                         aCGCCGACTTTAATGTGGTTTGGATCTTTTCATCCTGACCGCAGCCTACCAGTGCCAGTGATCCGATCAGGGCTCCCACTGCCGCAAAGGTtttgaattt                       >  1:1470200/1‑100 (MQ=255)
                                                                          cGCCGACTTTAATGTGGTTTGGATCTTTTCATCCTGACCGCAGCCTACCAGTGCCAGTGATCCGATCAGGGCTCCCACTGCCGCAAAGGTtttgaatttg                      <  1:2743714/100‑1 (MQ=255)
                                                                          cGCCGACTTTAATGTGGTTTGGATCTTTTCATCCTGACCGCAGCCTACCAGTGCCAGTGATCCGATCAGGGCTCCCACTGCCGCAAAGGTtttgaatttg                      >  2:1258915/1‑100 (MQ=255)
                                                                          cGCCGACTTTAATGTGGTTTGGATCTTTTCATCCTGACCGCAGCCTACCAGTGCCAGTGATCCGATCAGGGCTCCCACTGCCGCAAAGGTtttgaatttg                      <  2:1859128/100‑1 (MQ=255)
                                                                            cggccTTTATTGTGGTTGGGATCTTTTCACCCTGACCGCCGCCTCCCAGTGCCGGTGATCCGATCAGGGCTCCCACTCCCCAAAAGTTtttaaat                         <  2:1304192/91‑1 (MQ=255)
                                                                            ccGACTTTAATGTGGTTTGGATCTTTTCATCCTGACCGCAGCCTACCAGTGCCAGTGATCCGATCAGGGCTCCCACTGCCGCAAAGGTtttgaatttgaa                    <  1:444885/100‑1 (MQ=255)
                                                                              gACTTTAATGTGGTTTGGATCTTTTCATCCTGACCGCAGCCTACCAGTGCCAGTGATCCGATCAGGGCTCCCACTGCCGCAAAGGTTTTGAATTTGAACg                  <  2:1470187/100‑1 (MQ=255)
                                                                               aCTTTAATGTGGTTTGGATCTTTTCATCCTGACCGCAGCCTACCAGTGCCAGTGATCCGATCAGGGCTCCCACTGCCGCAAAGGTTTTGAATTTGAACGc                 <  1:576002/100‑1 (MQ=255)
                                                                                cTTTAATGTGGTTTGGATCTTTTCATCCTGACCGCAGCCTACCAGTGCCAGTGATCCGATCAGGGCTCCCACTGCCGCAAAGGTTTTGAATTTGAACGcc                >  2:2670528/1‑100 (MQ=255)
                                                                                cTTTAATGTGGTTTGGATCTTTTCATCCTGACCGCAGCCTACCAGTGCCAGTGATCCGATCAGCGCTCCCACTGCCGCAAAGGTTTTGAATTTGAACGcc                >  2:731254/1‑100 (MQ=255)
                                                                                  ttAATGTGGTTTGGATCTTTTCATCCTGACCGCAGCCTACCAGTGCCAGTGATCCGATCAGGGCTCCCACTGCCGCAAAGGTTTTGAATTTGAACGCCAt              <  1:1977633/100‑1 (MQ=255)
                                                                                  ttAATGTGGTTTGGATCTTTTCATCCTGACCGCAGCCTACCAGTGCCAGTGATCCGATCAGGGCTCCCACTGCCGCAAAGGTTTTGAATTTGAACGCCAt              >  2:263737/1‑100 (MQ=255)
                                                                                   tAATGTGGTTTGGATCTTTTCATCCTGACCGCAGCCTACCAGTGCCAGTGATCCGATCAGGGCTCCCACTGCCGCAAAGGTTTTGAATTTGAACGCCATa             >  1:3036396/1‑100 (MQ=255)
                                                                                     aTGTGGTTTGGATCTTTTCATCCTGACCGCAGCCTACCAGTGCCAGTGATCCGATCAGGGCTCCCACTGCCGCAAAGGTTTTGAATTTGAACGCCATAcc           <  1:90896/100‑1 (MQ=255)
                                                                                      tgtgGTTTGGATCTTTTCATCCTGACCGCAGCCTACCAGTGCCAGTGATCCGATCAGGGCTCCCACTGCCGCAAAGGTTTTGAATTTGAACGCCATACCt          >  1:2811214/1‑100 (MQ=255)
                                                                                      tgtgGTTTGGATCTTTTCATCCTGACCGCAGCCTACCAGTGCCAGTGATCCGATCAGGGCTCCCACTGCCGCAAAGGTTTTGAATTTGAACGCCATACCt          <  2:1605085/100‑1 (MQ=255)
                                                                                        tgGTTTGGATCTTTTCATCCTGACCGCAGCCTACCAGTGCCAGTGATCCGATCAGGGCTCCCACTGCCGCAAAGGTTTTGAATTTGAACGCCATACCTTa        >  1:2228602/1‑100 (MQ=255)
                                                                                         ggTTTGGATCTTTTCATCCTGACCGCAGCCTACCAGTGCCAGTGATCCGATCAGGGCTCCCACTGCCGCAAAGGTTTTGAATTTGAACGCCATACCTTAt       >  2:2369189/1‑100 (MQ=255)
                                                                                         ggTTTGGATCTTTTCATCCTGACCGCAGCCTACCAGTGCCAGTGATCCGATCAGGGCTCCCACTGCCGCAAAGGTTTTGAATTTGAACGCCATACCTTAt       >  1:1357470/1‑100 (MQ=255)
                                                                                         ggTTTGGATCTTTTCATCCTGACCGCAGCCTACCAGTGCCAGTGATCCGATCAGGGCTCCCACTGCCGCAAAGGTTTTGAATTTGAACGCCATACCTTAt       >  2:387947/1‑100 (MQ=255)
                                                                                          gTTTGGATCTTTTCATCCTGACCGCAGCCTACCAGTGCCAGTGATCCGATCAGGGCTCCCACTGCCGCAAAGGTTTTGAATTTGAACGCCATACCTTAtt      <  2:2633063/100‑1 (MQ=255)
                                                                                          gTTTGGATCTTTTCATCCTGACCGCAGCCTACCAGTGCCAGTGATCCGATCAGGGCTCCCACTGCCGCAAAGGTTTTGAATTTGAACGCCATACCTTAtt      >  1:1901692/1‑100 (MQ=255)
                                                                                           tttGGATCTTTTCATCCTGACCGCAGCCTACCAGTGCCAGTGATCCGATCAGGGCTCCCACTGCCGCAAAGGTTTTGAATTTGAACGCCATACCTTATTc     <  1:1764250/100‑1 (MQ=255)
                                                                                             tGGATCTTTTCATCCTGACCGCAGCCTACCAGTGCCAGTGATCCGATCAGGGCTCCCACTGCCGCAAAGGTTTTGAATTTGAACGCCATACCTTATTCct   >  2:234941/1‑100 (MQ=255)
                                                                                              ggATCTTTTCATCCTGACCGCAGCCTACCAGTGCCAGTGATCCGATCAGGGCTCCCACTGCCGCAAAGGTTTTGAATTTGAACGCCATACCTTATTCctt  <  1:132107/100‑1 (MQ=255)
                                                                                              ggATCTTTTCATCCTGACCGCAGCCTACCAGTGCCAGTGATCCGATCAGGGCTCCCACTGCCGCAAAGGTTTTGAATTTGAACGCCATACCTTATTCctt  >  2:1117383/1‑100 (MQ=255)
                                                                                                   |                                                                                               
AACGTCCAGGCCATATTTGTCTTTCGCAACTTTCTGCGCGACTTCTGCAACCTGCTGTTCGGCACCAACAATCACGCCGACTTTAATGTGGTTTGGATCTTTTTCATCCTGACCGCAGCCTACCAGTGCCAGTGATCCGATCAGGGCTCCCACTGCCGCAAAGGTTTTGAATTTGAACGCCATACCTTATTCCTT  >  NC_000913/220746‑220940

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: