| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,595,273 | Δ1 bp | coding (208/1278 nt) | livM ← | branched‑chain amino acid ABC transporter permease |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,595,270 | 0 | T | . | 98.3% | 511.5 / 2.6 | 118 | coding (211/1278 nt) | livM | branched‑chain amino acid ABC transporter permease |
| Reads supporting (aligned to +/- strand): ref base T (0/2); new base . (52/63); total (52/66) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.02e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.71e-01 | |||||||||||
Only 100 of 130 total aligned reads displayed.
GCCACGCCACCGCAAGCACCAACAGCGCCACGAGGAACAGTTTCTGCTTCACCGTGGAGCCATCAATGGCGGGCAGAATAAACTTCGGTCCGGAAACGCTTTTCAACCCTTTCTGGAAAGCCGGTCGCAAAAGCTGGAAGAAAAAGACCACCGCCGTGCCGATAAACACCCACTGCCAACGGACATCCGAAGCCG > NC_000913/3595171‑3595365 | gccacgccacCGCAAGCACCAACAGCGCCACGAGGAACAGTTTCTGCTTCACCGTGGAGCCATCAATGGCGGGCAGAATAAACTTCGGTCCGGAAACGCt > 1:563873/1‑100 (MQ=255)gccacgccacCGCAAGCACCAACAGCGCCACGAGGAACAGTTTCTGCTTCACCGTGGAGCCATCAATGGCGGGCAGAATAAACTTCGGTCCGGAAACGCt > 2:1134251/1‑100 (MQ=255) ccacgccacCGCAAGCACCAACAGCGCCACGAGGAACAGTTTCTGCTTCACCGTGGAGCCATCAATGGCGGGCAGAATAAACTTTTGTCCGTAAACGCt < 2:1819049/99‑1 (MQ=255) cacgccacCGCAAGCACCAACAGCGCCACGAGGAACAGTTTCTGCTTCACCGTGGAGCCATCAATGGCGGGCAGAATAAACTTCGGTCCGGAAACGCttt > 1:2575585/1‑100 (MQ=255) cacgccacCGCAAGCACCAACAGCGCCACGAGGAACAGTTTCTGCTTCACCGTGGAGCCATCAATGGCGGGCAGAATAAACTTCGGTCCGGAAACGCttt < 1:193224/100‑1 (MQ=255) acgccacCGCAAGCACCAACAGCGCCACGAGGAACAGTTTCTGCTTCACCGTGGAGCCATCAATGGCGGGCAGAATAAACTTCGGTCCGGAAACGCtttc < 2:667024/100‑2 (MQ=255) cgccacCGCAAGCACCAACAGCGCCACGAGGAACAGTTTCTGCTTCACCGTGGAGCCATCAATGGCGGGCAGAATAAACTTCGGTCCAGAAACGCtttca > 1:1206204/1‑98 (MQ=255) gccacCGCAAGCACCAACAGCGCCACGAGGAACAGTTTCTGCTTCACCGTGGAGCCATCAATGGCGGGCAGAATAAACTTCGGTCCGGAAACGCtttcaa > 1:839093/1‑97 (MQ=255) ccacCGCAAGCACCAACAGCGCCACGAGGAACAGTTTCTGCTTCACCGTGGAGCCATCAATGGCGGGCAGAATAAACTTCGGTCCGGAAACGCtttcaac < 1:2749807/100‑5 (MQ=255) acCGCAAGCACCAACAGCGCCACGAGGAACAGTTTCTGCTTCACCGTGGAGCCATCAATGGCGGGCAGAATAAACTTCGGTCCGGAAACGC‑TTTCAAccc < 2:2935470/100‑1 (MQ=255) cAAGCACCAACAGCGCCACGAGGAACAGTTTCTGCTTCACCGTGGAGCCATCAATGGCGGGCAGAATAAACTTCGGTCCGGAAACGC‑TTTCAACCCTTTc > 1:564483/1‑100 (MQ=255) aaGCACCAACAGCGCCACGAGGAACAGTTTCTGCTTCACCGTGGAGCCATCAATGGCGGGCAGAATAAACTTCGGTCCGGAAACGC‑TTTCAACCCTTTCt < 2:2328823/100‑1 (MQ=255) aGCACCAACAGCGCCACGAGGAACAGTTTCTGCTTCACCGTGGAGCCATCAATGGCGGGCAGAATAAACTTCGGTCCGGAAACGC‑TTTCAACCCTTTCTg < 1:332597/100‑1 (MQ=255) tcACCAACAGCGCCACGAGGAACAGTTTCTGCTTCACCGTGGAGCCATCAATGGCGGGCAGAATAAACTTCGGTCCGGAGACGC‑TTTCAACCCTTTCTgg < 2:1866640/99‑1 (MQ=255) taCCAACAGCGCCACGAGGAACAGTTTCTGCTTCACCGTGGAGCCATCAATGGCGGGCAGAATAAACTTCGGTCCGGAAACGC‑TTTCAACCCTTTCTGGa < 1:2766062/99‑1 (MQ=255) cACCAACAGCGCCACGAGGAACAGTTTCTGCTTCACCGTGGAGCCATCAATGGCGGGCAGAATAAACTTCGGTCCGGAAACGC‑TTTCAACCCTTTCTGGa < 2:2552246/100‑1 (MQ=255) cACCAACAGCGCCACGAGGAACAGTTTCTGCTTCACCGTGGAGCCATCAATGGCGGGCAGAATAAACTTCGGTCCGGAAACGC‑TTTCAACCCTTTCTGGa > 1:2751466/1‑100 (MQ=255) aCCAACAGCGCCACGAGGAACAGTTTCTGCTTCACCGTGGAGCCATCAATGGCGGGCAGAATAAACTTCGGTCCGGAAACGC‑TTTCAACCCTTTCTGGaa > 1:2885479/1‑100 (MQ=255) aCCAACAGCGCCACGAGGAACAGTTTCTGCTTCACCGTGGAGCCATCAATGGCGGGCAGAATAAACTTCGGTCCGGAAACGC‑TTTCAACCCTTTCTGGaa > 1:403373/1‑100 (MQ=255) aCCAACAGCGCCACGAGGAACAGTTTCTGCTTCACCGTGGAGCCATCAATGGCGGGCAGAATAAACTTCGGTCCGGAAACGC‑TTTCAACCCTTTCTGGaa > 2:2766025/1‑100 (MQ=255) ccAACAGCGCCACGAGGAACAGTTTCTGCTTCACCGTGGAGCCATCAATGGCGGGCAGAATAAACTTCGGTCCGGAAACGC‑TTTCAACCCTTTCTGGaaa > 1:2810179/1‑100 (MQ=255) aCAGCGCCACGAGGAACAGTTTCTGCTTCACCGTGGAGCCATCAATGGCGGGCAGAATAAACTTCGGTCCGGAAACGC‑TTTCAACCCTTTCTGGAAAGcc < 2:2042366/100‑1 (MQ=255) aCAGCGCCACGAGGAACAGTTTCTGCTTCACCGTGGAGCCATCAATGGCGGGCAGAATAAACTTCGGTCCGGAAACGC‑TTTCAACCCTTTCTGGAAAGcc < 2:2655822/100‑1 (MQ=255) cAGCGCCACGAGGAACAGTTTCTGCTTCACCGTGGAGCCATCAATGGCGGGCAGAATAAACTTCGGTCCGGAAACGC‑TTTCAACCCTTTCTGGAAAGCCg < 1:107644/100‑1 (MQ=255) aGCGCCACGAGGAACAGTTTCTGCTGCACCGTGGAGCCATCAATGGCGGGCAGAATAAACTTCGGTCCGGAAACGC‑TTTCAACCCTTTCTGGAAAGCCgg < 2:2684277/100‑1 (MQ=255) gcCACGAGGAACAGTTTCTGCTTCACCGTGGAGCCATCAATGGCGGGCAGAATAAACTTCGGTCCGGAAACGC‑TTTCAACCCTTTCTGGAAAGCCGGTCg > 1:2064515/1‑100 (MQ=255) gcCACGAGGAACAGTTTCTGCTTCACCGTGGAGCCATCAATGGCGGGCAGAATAAACTTCGGTCCGGAAACGC‑TTTCAACCCTTTCTGGAAAGCCGGTCg > 1:1488876/1‑100 (MQ=255) gcCACGAGGAACAGTTTCTGCTTCACCGTGGAGCCATCAATGGCGGGCAGAATAAACTTCGGTCCGGAAACGC‑TTTCAACCCTTTCTGGAAAGCCGGTCg > 1:1726687/1‑100 (MQ=255) gcCACGAGGAACAGTTTCTGCTTCACCGTGGAGCCATCAATGGCGGGCAGAATAAACTTCGGTCCGGAAACGC‑TTTCAACCCTTTCTGGAAAGCCGGTCg > 2:2389106/1‑100 (MQ=255) gcCACGAGGAACAGTTTCTGCTTCACCGTGGAGCCATCAATGGCGGGCAGAATAAACTTCGGTCCGGAAACGC‑TTTCAACCCTTTCTGGAAAGCCGGTCg < 2:1711630/100‑1 (MQ=255) ccACGAGGAACAGTTTCTGCTTCACCGTGGAGCCATCAATGGCGGGCAGAATAAACTTCGGTCCGGAAACGC‑TTTCAACCCTTTCTGGAAAGCCGGTCGc > 2:2252636/1‑100 (MQ=255) cACGAGGAACAGTTTCTGCTTCACCGTGGAGCCATCGATGGCGGGCAGAATAAACTTCGGTCCGGAAACGC‑TTTCAACCCTTTCTGGAAAGCCGGTCGCa < 1:2145063/100‑1 (MQ=255) cACGAGGAACAGTTTCTGCTTCACCGTGGAGCCATCAATGGCGGGCAGAATAAACTTCGGTCCGGAAACGC‑TTTCAACCCTTTCTGGAAAGCCGGTCGCa < 2:177002/100‑1 (MQ=255) cACGAGGAACAGTTTCTGCTTCACCGTGGAGCCATCAATGGCGGGCAGAATAAACTTCGGTCCGGAAACGC‑TTTCAACCCTTTCTGGAAAGCCGGTCGCa < 2:1390885/100‑1 (MQ=255) aCGAGGAACAGTTTCTGCTTCACCGTGGAGCCATCAATGGCGGGCAGAATAAACTTCGGTCCGGAAACGC‑TTTCAACCCTTTCTGGAAAGCCGGTCGCaa > 2:700244/1‑100 (MQ=255) aGGAACAGTTTCTGCTTCACCGTGGAGCCATCAATGGCGGGCAGAATAAACTTCGGTCCGGAAACGC‑TTTCAAACCTTTCTGGAAAGCCGGTCGCAAAAg > 1:2853809/1‑100 (MQ=255) gAACAGTTTCTGCTTCACCGTGGAGCCATCAATGGCGGGCAGAATAAACTTCGGTCCGGAAACGC‑TTTCAACCCTTTCTGGAAAGCCGGTCGCAAAAGCt < 1:1570822/100‑1 (MQ=255) gAACAGTTTCTGCTTCACCGTGGAGCCATCAATGGCGGGCAGAATAAACTTCGGTCCGGAAACGC‑TTTCAACCCTTTCTGGAAAGCCGGTCGCAAAAGCt > 2:1937068/1‑100 (MQ=255) aaCAGTTTCTGCTTCACCGTGGAGCCATCAATGGCGGGCAGAATAAACTTCGGTCCGGAAACGC‑TTTCAACCCTTTCTGGAAAGCCGGTCGCAAAGGCTg > 1:101808/1‑100 (MQ=255) aaCAGTTTCTGCTTCACCGTGGAGCCATCAATGGCGGGCAGAATAAACTTCGGTCCGGAAACGC‑TTTCAACCCTTTCTGGAAAGCCGGTCGCAAAAGCTg < 2:684472/100‑1 (MQ=255) aCAGTTTCTGCTTCACCGTGGAGCCATCAATGGCGGGCAGAATAAACTTCGGTCCGGAAACGC‑TTTCAACCCTTTCTGGAAAGCCGGTCGCAAAAGCTgg < 2:331996/100‑1 (MQ=255) aCAGTTTCTGCTTCACCGTGGAGCCATCAATGGCGGGCAGAATAAACTTCGGTCCGGAAACGC‑TTTCAACCCTTTCTGGAAAGCCGGTCGCAAAAGCTgg > 1:739316/1‑100 (MQ=255) aCAGTTTCTGCTTCACCGTGGAGCCATCAATGGCGGGCAGAATAAACTTCGGTCCGGAAACGC‑TTTCAACCCTTTCTGGAAAGCCGGTCGCAAAAGCTgg > 1:677818/1‑100 (MQ=255) cAGTTTCTGCTTCACCGTGGAGCCATCATTGGCGGGCAGAATAATCTTCGGTCCGGAAACGC‑TTTCAACCCTTTCTGGAAAGCCGGTCGCAAAAGCTGga < 2:790254/100‑1 (MQ=255) aGTTTCTGCTTCACCGTGGAGCCATCAATGGCGGGCAGAATAAACTTCGGTCCGGAAACGC‑TTTCAACCCTTTCTGGAAAGCCGGTCGCAAAAGCTGgaa > 1:2282797/1‑100 (MQ=255) aGTTTCTGCTTCACCGTGGAGCCATCAATGGCGGGCAGAATAAACTTCGGTCCGGAAACGC‑TTTCAACCCTTTCTGGAAAGCCGGTCGCAAAAGCTGgaa < 1:2269736/100‑1 (MQ=255) gTTTCTGCTTCACCGTGGAGCCATCAATGGCGGGCAGAATAAACTTCGGTCCGGAAACGC‑TTTCAACCCTTTCTGGAAAGCCGGTCGCAAAAGCTGgaag < 1:132918/100‑1 (MQ=255) gTTTCTGCTTCACCGTGGAGCCATCAATGGCGGGCAGAATAAACTTCGGTCCGGAAACGC‑TTTCAACCCTTTCTGGAAAGCCGGTCGCAAAAGCTGgaag > 1:2133974/1‑100 (MQ=255) gTTTCTGCTTCACCGTGGAGCCATCAATGGCGGGCAGAATAAACTTCGGTCCGGAAACGC‑TTTCAACCCTTTCTGGAAAGCCGGTCGCAAAAGCTGgaag > 1:2134324/1‑100 (MQ=255) gTTTCTGCTTCACCGTGGAGCCATCAATGGCGGGCAGAATAAACTTCGGTCCGGAAACGC‑TTTCAACCCTTTCTGGAAAGCCGGTCGCAAAAGCTGgaag < 1:700252/100‑1 (MQ=255) tttCTGCTTCACCGTGGAGCCATCAATGGCGGGCAGAATAAACTTCGGTCCGGAAACGC‑TTTCAACCCTTTCTGGAAAGCCGGTCGCAAAAGCTGgaaga < 2:2373733/100‑1 (MQ=255) ttCTGCTTCACCGTGGAGCCATCAATGGCGGGCAGAACAAACTTCGGTCCGGAAACGC‑TTTCAACCCTTTCTGGAAAGCCGGTCGCAAAAGCTGgaagaa > 2:1638371/1‑100 (MQ=255) cTGCTTCACCGTGGAGCCATCAATGGCGGGCAGAATAAACTTCGGTCCGGAAACGC‑TTTCAACCCTTTCTGGAAAGCCGGTCGCAAAAGCTGGAAGaaaa > 2:383792/1‑100 (MQ=255) tGCTTCACCGTGGAGCCATCAATGGCGGGCAGAATAAACTTCGGTCCGGAAACGC‑TTTCAACCCTTTCTGGAAAGCCGGTCGCAAAAGCTGGAAGaaaaa < 1:1184239/100‑1 (MQ=255) tcTTCACCGTGGAGCCATAAAAGTCGGGCACAATAAACTTCGGTCCGGAAACGC‑TTTCAACCCTTTCTTGAAAGCCGGTCGCAAAAGCTGGAAGAAAAAg < 2:2803561/99‑1 (MQ=255) gCTTCACCGTGGAGCCATCAATGGCGGGCAGAATAAACTTCGGTCCGGAAACGC‑TTTCAACCCTTTCTGGAAAGCCGGTCGCAAAAGCTGGAAGAAAAAg < 1:1134263/100‑1 (MQ=255) ttCACCGTGGAGCCATCAATGGCGGGCAGAATAAACTTCGGTCCGGAAACGC‑TTTCAACCCTTTCTGGAAAGCCGGTCGCAAAAGCTGGAAGAAAAAGac > 2:2839603/1‑100 (MQ=255) ttCACCGTGGAGCCATCAATGGCGGGCAGAATAAACTTCGGTCCGGAAACGC‑TTTCAACCCTTTCTGGAAAGCCGGTCGCAAAAGCTGGAAGAAAAAGac < 1:2930989/100‑1 (MQ=255) tCACTGTGGAGCCATCAATGGCGGGCAGAATAAACTTCGGTCCGGAAACGC‑TTTCAACCCTTTCTGGAAAGCCGGTCGCAAAAGCTGGAAGAAAAAg < 2:152817/97‑1 (MQ=255) tCACCGTGGAGCCATCCATGGCGGGCAGAATAAACTTCGGTCCGGAAACGC‑TTTCAACCCTTTCTGGAAAGCCGGTCGCAAAAGCTGGAAGaaaaa < 2:1578946/96‑1 (MQ=255) cACCGTGGAGCCATCAATGGCGGGCAGAATAAACTTCGGTCCGGAAACGC‑TTTCAACCCTTTCTGGAAAGCCGGTCGCAAAAGCTGGAACAAAAAGacca > 2:2011457/1‑100 (MQ=255) ccGTGGAGCCATCAATGGCGGGCAGAATAAACTTCGGTCCGGAAACGC‑TTTCAACCCTTTCTGGAAAGCCGGTCGCAAAAGCTGGAAGAAAAAGaccacc > 1:1964356/1‑100 (MQ=255) aGCCATCAATGGCGGGCAGAATAAACTTCGGTCCGGAAACGC‑TTTCAACCCTTTCTGGAAAGCCGGTCGCAAAAGCTGGAAGAAAAAGACCACCGCCGTg < 2:839084/100‑1 (MQ=255) aGCCATCAATGGCGGGCAGAATAAACTTCGGTCCGGAAACGC‑TTTCAACCCTTTCTGGAAAGCCGGTCGCAAAAGCTGGAAGAAAAAGACCACCGCCGTg < 2:279737/100‑1 (MQ=255) ccATCAATGGCGGGCAGAATAAACTTCGGTCCGGAAACGC‑TTTCAACCCTTTCTGGAAAGCCGGTCGCAAAAGCTGGAAGAAAAAGACCACCGCCGTGcc < 2:2400452/100‑1 (MQ=255) ccATCAATGGCGGGCAGAATAAACTTCGGTCCGGAAACGC‑TTTCAACCCTTTCTGGAAAGCCGGTCGCAAAAGCTGGAAGAAAAAGACCACCGCCGTGcc < 1:1393260/100‑1 (MQ=255) cATCAATGGCGGGCAGAATAAACTTCGGTCCGGAAACGC‑TTTCAACCCTTTCTGGAAAGCCGGTCGCAAAAGCTGGAAGAAAAAGACCACCGCCGTGCCg < 2:1553423/100‑1 (MQ=255) cATCAATGGCGGGCAGAATAAACTTCGGTCCGGAAACGC‑TTTCAACCCTTTCTGGAAAGCCGGTCGCAAAAGCTGGAAGAAAAAGACCACCGCCGTGCCg > 1:157820/1‑100 (MQ=255) aTCAATGGCGGGCAGAATAAACTTCGGTCCGGAAACGC‑TTTCAACCCTTTCTGGAAAGCCGGTCGCAAAAGCTGGAAGAAAAAGACCACCGCCGTGCCGa > 1:2288108/1‑100 (MQ=255) aTCAATGGCGGGCAGAATAAACTGCGGTCCGGAAACGCTGTTCAACCCTTTCTGGAAAGCCGGTCGCAAAAGCTGGAAGAAAAAGACCACCGCCGTGcc < 2:2327692/99‑1 (MQ=255) tCAATGGCGGGCAGAATAAACTTCGGTCCGGAAACG‑ATTTCAACCCTTTCTGGAAAGCCGGTCGCAAAAGCTGGAAGAAAAAGACCACCGCCGTGCCGAt < 1:1941803/100‑1 (MQ=255) cAATGGCGGGCAGAATAAACTTCGGTCCGGAAACGC‑TTTCAACCCTTTCTGGAAAGCCGGTCGCAAAAGCTGGAAGAAAAAGACCACCGCCGTGCCGATa < 1:551213/100‑1 (MQ=255) cAATGGCGGGCAGAATAAACTTCGGTCCGGAAACGC‑TTTCAACCCTTTCTGGAAAGCCGGTCGCAAAAGCTGGAAGAAAAAGACCACCGCCGTGCCGATa < 1:2866565/100‑1 (MQ=255) aaTGGCGGGCAGAATAAACTTCGGTCCGGAAACGC‑TTTCAACCCTTTCTGGAAAGCCGGTCGCAAAAGCTGGAAGAAAAAGACCACCGCCGTGCCGATaa > 2:2325711/1‑100 (MQ=255) aTGGCGGGCAGAATAAACTTCGGTCCGGAAACGC‑TTTCAACCCTTTCTGGAAAGCCGGTCGCAAAAGCTGGAAGAAAAAGACCACCGCCGTGCCGATaaa < 1:172111/100‑1 (MQ=255) aTGGCGGGCAGAATAAACTTCGGTCCGGAAACGC‑TTTCAACCCTTTCTGGAAAGCCGGTCGCAAAAGCTGGAAGAAAAAGACCACCGCCGTGCCGATaaa < 2:2341571/100‑1 (MQ=255) aTGGCCGGCAGAATAAACTTCGGTCCGGAAACGC‑TTTCAACCCTTTCTGGAACGCCGGTCGCAAAAGCTGGAAGAAAAAGACCACCGCCGTGCCGAt < 2:677810/97‑1 (MQ=255) tGGCGGGCAGAATAAACTTCGGTCCGGAAACGC‑TTTCAACCCTTTCTGGAAAGCCGGTCGCAAAAGCTGGAAGAAAAAGACCACCGCCGTGCCGATAAac > 1:1304984/1‑100 (MQ=255) tGGCGGGCAGAATAAACTTCGGTCCGGAAACGC‑TTTCAACACTTTCTGGAAAGCCGGTCGCAAAAGCTGGAAGAAAAAGACCACCGCCGTGCCGATAAac > 1:783687/1‑100 (MQ=255) gCGGGCAGAATAAACTTCGGTCCGGAAACGC‑TTTCAACCCTTTCTGGAAAGCCGGTCGCAAAAGCTGGAAGAAAAAGACCACCGCCGTGCCGATAAacac < 2:798516/100‑1 (MQ=255) gCAGAATAAACTTCGGTCCGGAAACGC‑TTTCAACCCTTTCTGGAAAGCCGGTCGCAAAAGCTGGAAGAAAAAGACCACCGCCGTGCCGATAAACACCCAc < 1:1739636/100‑1 (MQ=255) cAGAATAAACTTCGGTCCGGAAACGC‑TTTCAACCCTTTCTGGAAAGCCGGTCGCAAAAGCTGGAAGAAAAAGACCACCGCCGTGCCGATAAACACCCACt > 2:1904335/1‑100 (MQ=255) aGAATAAACTTCGGTCCGGAAACGC‑TTTCAACCCTTTCTGGAAAGCCGGTCGCAAAAGCTGGAAGAAAAAGACCACCGCCGTGCCGATAAACACCCACTg < 1:87826/100‑1 (MQ=255) aGAATAAACTTCGGTCCGGAAACGC‑TTTCAACCCTTTCTGGAAAGCCGGTCGCAAAAGCTGGAAGAAAAAGACCACCGCCGTGCCGATAAACACCCACTg < 2:2264767/100‑1 (MQ=255) aGAATAAACTTCGGTCCGGAAACGC‑TTTCAACCCTTTCTGGAAAGCCGGTCGCAAAAGCTGGAAGAAAAAGACCACCGCCGTGCCGATAAACACCCACTg < 2:629680/100‑1 (MQ=255) aTAAACTTCGGTCCGGAAACGC‑TTTCAACCCTTTCTGGAAAGCCGGTCGCAAAAGCTGGAAGAAAAAGACCACCGCCGTGCCGATAAACACCCACTGCCa > 2:86604/1‑100 (MQ=255) aCTTCGGTCCGGAAACGC‑TTTCAACCCTTTCTGGAAAGCCGGTCGCAAAAGCTGGAAGAAAAAGACCACCGCCGTGCCGATAAACACCCACTGCCAACgg > 2:2250530/1‑100 (MQ=255) cTTCGGTCCGGAAACGC‑TTTCAACCCTTTCTGGAAAGCCGGTCGCAAAAGCTGGAAGAAAAAGACCACCGCCGTGCCGATAAACACCCACTGCCAACGGa > 2:905938/1‑100 (MQ=255) cTTCGGTCCGGAAACGC‑TTTCAACCCTTTCTGGAAAGCCGGTCGCAAAAGCTGGAAGAAAAAGACCACCGCCGGGCCGATAAACACCCACTGCCAACGGa < 1:1861172/100‑1 (MQ=255) ttCGGTCCGGAAACGC‑TTTCAACCCTTTCTGGAAAGCCGGTCGCAAAAGCTGGAAGAAAAAGACCACCGCCGTGCCGATAAACACCCACTGCCAACGGAc < 2:563866/100‑1 (MQ=255) ttCGGTCCGGAAACGC‑TTTCAACCCTTTCTGGAAAGCCGGTCGCAAAAGCTGGAAGAAAAAGACCACCGCCGTGCCGATAAACACCCACTGCCAACGGAc > 1:2825706/1‑100 (MQ=255) tCGGTCCGGAAACGC‑TTTCAACCCTTTCTGGAAAGCCGGTCGCAAAAGCTGGAAGAAAAAGACCACCGCCGTGCCGATAAACACCCACTGCCAACGGACa > 1:1755380/1‑100 (MQ=255) ggTCCGGAAACGCTTTTCAACCCTTTCTGGAAAGCCGGTCGCAAAAGCTGGAAGAAAAAGACCACCGCCGTGCCGATAAACACCCACTGCCAACGGACAt < 1:2546926/100‑1 (MQ=255) gTCCGGAAACGC‑TTTCAACCCTTTCTAGAAAGCCGGTCGCAAAAGCTGGAAGAAAAAGACCACCGCCGTGCCGATAAACACCCACTGCCAACGGACATcc > 1:1866348/1‑100 (MQ=255) ggAAACGC‑TTTCAACCCTTTCTGGAAAGCCGGTCGCAAAAGCTGGAAGAAAAAGACCACCGCCGTGCCGATAAACACCCACTGCCAACGGACATCCGAAg < 2:403366/100‑1 (MQ=255) ggAAACGC‑TTTCAACCCTTTCTGGAAAGCCGGTCGCAAAAGCTGGAAGAAAAAGACCACCGCCGTGCCGATAAACACCCACTGCCAACGGACATCCGAAg < 2:296772/100‑1 (MQ=255) ggAAACGC‑TTTCAACCCTTTCTGGAAAGCCGGTCGCAAAAGCTGGAAGAAAAAGACCACCGCCGTGCCGATAAACACCCACTGCCAACGGACATCCGAAg > 1:1116617/1‑100 (MQ=255) gAAACGC‑TTTCAACCCTTTCTGGAAAGCCGGTCGCAAAAGCTGGAAGAAAAAGACCACCGCCGTGCCGATAAACACCCACTGCCAACGGACATCCGAAGc < 1:1194769/100‑1 (MQ=255) aaaCGC‑TTTCAACCCTTTCTGGAAAGCCGGTCGCAAAAGCTGGAAGAAAAAGACCACCGCCGTGCCGATAAACACCCACTNCCAACGGACATCCGAAGcc < 1:1675395/100‑1 (MQ=255) aaCGC‑TTTCAACCCTTTCTGGAAAGCCGGTCGCAAAAGCTGGAAGAAAAAGACCACCGCCGTGCCGATAAACACCCACTGCCAACGGACATCCGAAGCCg > 1:588982/1‑100 (MQ=255) | GCCACGCCACCGCAAGCACCAACAGCGCCACGAGGAACAGTTTCTGCTTCACCGTGGAGCCATCAATGGCGGGCAGAATAAACTTCGGTCCGGAAACGCTTTTCAACCCTTTCTGGAAAGCCGGTCGCAAAAGCTGGAAGAAAAAGACCACCGCCGTGCCGATAAACACCCACTGCCAACGGACATCCGAAGCCG > NC_000913/3595171‑3595365 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |