| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,383,727 | (A)5→6 | coding (235/999 nt) | ycjW ← | LacI family putative transcriptional repressor |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,383,722 | 1 | . | A | 96.5% | 285.8 / 2.7 | 85 | coding (240/999 nt) | ycjW | LacI family putative transcriptional repressor |
| Reads supporting (aligned to +/- strand): ref base . (1/2); new base A (37/45); total (38/47) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.45e-01 | |||||||||||
Only 100 of 102 total aligned reads displayed.
GCATTTTTGCAGATCTTCTGCCGGATTGTGCGACGTTTGTAATATCACGTCGAAACCTTCTTCTTCAGCTTTGGCGGTGATGGCATGCAAAACTTCAGAG‑AAAAA‑CGGATTACCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGCCAGCTT > NC_000913/1383623‑1383814 | gCATTTTTGCAGATCTTCTGCCGGATTGTGCGACGTTTGTAATATCACGTCGAAACCTTCTTCTTCAGCTTTGGCGGTGATGGCATGCAAAACTTCagag > 2:2067275/1‑100 (MQ=255)gCATTTTTGCAGATCTTCTGCCGGATTGTGCGACGTTTGTAATATCACGTCGAAACCTTCTTCTTCAGCTTTGGCGGTGATGGCATGCAAAACTTCagag < 2:1797017/100‑1 (MQ=255)gCATTTTTGCAGATCTTCTGCCGGATTGTGCGACGTTTGTAATATCACGTCGAAACCTTCTTCTTCAGCTTTGGCGGTGATGGCATGCAAAACTTCagag < 1:1883853/100‑1 (MQ=255) tttttGCAGATCTTCTGCCGGATTGTGCGACGTTTGTAATATCACGTCGAAACCTTCTTCTTCAGCTTTGGCGGTGATGGCATGCAAAACTTCAGAG‑aaa > 1:783277/1‑100 (MQ=255) ttttGCAGATCTTCTGCCGGATTGTGCGACGTTTGTAATATCACGTCGAAACCTTCTTCTTCAGCTTTGGCGGTGATGGCATGCAAAACTTCAGAG‑aaaa < 1:1611796/100‑1 (MQ=255) ttGCAGATCTTCTGCCGGATTGTGCGACGTTTGTAATATCACGTCGAAACCTTCTTCTTCAGCTTTGGCGGTGATGGCATGCAAAACTTCAGAG‑aaaaaa > 2:581792/1‑99 (MQ=255) tGCAGATCTTCTGCCGGATTGTGCGACGTTTGTAATATCACGTCGAAACCTTCTTCTTCAGCTTTGGCGGTGATGGCATGCAAAACTTCAGAG‑aaaaaac < 1:2587976/100‑3 (MQ=255) tGCAGATCTTCTGCCGGATTGTGCGACGTTTGTAATATCACGTCGAAACCTTCTTCTTCAGCTTTGGCGGTGATGGCATGCAAAACTTCAGAG‑aaaaaac < 1:1502736/100‑3 (MQ=255) gCAGATCTTCTGCCGGATTGTGCGACGTTTGTAATATCACGTCGAAACCTTCTTCTTCTGCTTTGGCGGTGATGGCATGCAAAACTTCAGAG‑aaaaaacg < 2:1674901/100‑4 (MQ=255) gCAGATCTTCTGCCGGATTGTGCGACGTTTGTAATATCACGTCGAAACCTTCTTCTTCAGCTTTGGCGGTGATGGCATGCAAAACTTCAGAG‑aaaaaacg < 1:1142647/100‑4 (MQ=255) cAGATCTTCTGCCGGATTGTGCGACGTTTGTAATATCACGTCGAAACCTTCTTCTTCAGCTTTGGCGGTGATGGCATGCAAAACTTCAGAG‑aaaaaacgg > 1:2626346/1‑96 (MQ=255) cAGATCTTCTGCCGGATTGTGCGACGTTTGTAATATCACGTCGAAACCTTCTTCTTCAGCTTTGGCGGTGATGGCATGCAAAACTTCAGAG‑aaaaaacgg < 1:2581761/100‑5 (MQ=255) cAGATCTTCTGCCGGATTGTGCGACGTTTGTAATATCACGTCGAAACCTTCTTCTTCAGCTTTGGCGGTGATGGCATGCAAAACTTCAGAG‑aaaaaacgg < 1:63956/100‑5 (MQ=255) cAGATCTTCTGCCGGATTGTGCGACGTTTGTAATATCACGTCGAAACCTTCTTCTTCAGCTTTGGCGGTGATGGCATGCAAAACTTCAGAG‑aaaaaacgg > 2:1651312/1‑96 (MQ=255) aGATCTTCTGCCGGATTGTGGGACGTTTGTAATATCACGTCGAAACCTTCTTCTTCAGCTTTGGCGGTGATGGCATGCAAAACTTCAGAG‑aaaaaacgga > 2:1866554/1‑95 (MQ=255) aGATCTTCTGCCGGATTGTGCGACGTTTGTAATATCACGTCGAAACCTTCTTCTTCAGCTTTGGCGGTGATGGCATGCAAAACTTCAGAG‑aaaaaacgga > 2:2734228/1‑95 (MQ=255) gATCTTCTGCCGGATTGTGCGACGTTTGTAATATCACGTCGAAACCTTCTTCTTCAGCTTTGGCGGTGATGGCATGCAAAACTTCAGAGAAAAAA‑CGGAt > 2:1586732/1‑100 (MQ=255) gATCTTCTGCCGGATTGTGCGACGTTTGTAATATCACGTCGAAACCTTCTTCTTCAGCTTTGGCGGTGATGGCATGCAAAACTTCAGAGAAAAAA‑CGGAt > 2:1111134/1‑100 (MQ=255) nttctGCCGGATTGTGCGACGTTTGTAATATCACGTCGAAACCTTCTTCTTCAGCTTTGGCGGTGATGGCATGCAAAACTTCAGAGAAAAAA‑CGGATTAc > 1:931253/2‑100 (MQ=255) cttctGCCGGATTGTGCGACGTTTGTAATATCACGTCGAAACCTTCTTCTTCAGCTTTGGCGGTGATGGCATGCAAAACTTCAGAGAAAAAA‑CGGATTAc > 2:1860059/1‑100 (MQ=255) cttctGCCGGATTGTGCGACGTTTGTAATATCACGTCGAAACCTTCTTCTTCAGCTTTGGCGGTGATGGCATGCAAAACTTCAGAGAAAAAA‑CGGATTAc > 1:324658/1‑100 (MQ=255) ttctGCCGGATTGTGCGACGTTTGTAATATCACGTCGAAACCTTCTTCTTCAGCTTTGGCGGTGATGGCATGCAAAACTTCAGAGAAAAAA‑CGGATTAcc > 1:1275400/1‑100 (MQ=255) tGCCGGATTGTGCGACGTTTGTAATATCACGTCGAAACCTTCTTCTTCAGCTTTGGCGGTGATGGCATGCAAAACTTCAGAGAAAAAA‑CGGATTACccgc < 1:581800/100‑1 (MQ=255) gCCGGATTGTGCGACGTTTGTAATATCACGTCGAAACCTTCTTCTTCAGCTTTGGCGGTGATGGCATGCAAAACTTCAGAGAAAAAA‑CGGATTACccgc < 2:2123072/99‑1 (MQ=255) ggATTGTGCGACGTTTGTAATATCACGTCGAAACCTTCTTCTTCAGCTTTGGCGGTGATGGCATGCAAAACTTCAGAGAAAAAA‑CGGATTACCCGCCGTa < 2:2309391/100‑1 (MQ=255) ggATTGTGCGACGTTTGTAATATCACGTCGAAACCTTCTTCTTCAGCTTTGGCGGTGATGGCATGCAAAACTTCAGAGAAAAAA‑CGGATTACCCGCCGTa < 1:689869/100‑1 (MQ=255) tgCGACGTTTGTAATATCACGTCGAAACCTTCTTCTTCAGCTTTGGCGGTGATGGCATGCGAAACTTCAGAGAAAAAA‑CGGATTACCCGCCGTAGTTTTg > 1:52416/1‑100 (MQ=255) tgCGACGTTTGTAATATCACGTCGAAACCTTCTTCTTCAGCTTTGGCGGTGATGGCATGCAAAACTTCAGAGAAAAAA‑CGGATTACCCGCCGTAGTTTTg < 1:980326/100‑1 (MQ=255) gCGACGTTTGTAATATCACGTCGAAACCTTCTTCTTCAGCTTTGGCGGTGATGGCATGCAAAACTTCAGAGAAAAAA‑CGGATTACCCGCCGTAGTTTTgg > 1:569829/1‑100 (MQ=255) gCGACGTTTGTAATATCACGTCGAAACCTTCTTCTTCAGCTTTGGCGGTGATGGCATGCAAAACTTCAGAGAAAAAA‑CGGATTACCCGCCGTAGTTTTgg < 1:472470/100‑1 (MQ=255) gCGACGTTTGTAATATCACGTCGAAACCTTCTTCTTCAGCTTTGGCGGTGATGGCATGCAAAACTTCAGAGAAAAAA‑CGGATTACCCGCCGTAGTTTTgg < 1:2575730/100‑1 (MQ=255) cGACGTTTGTAATATCACGTCGAAACCTTCTTCTTCAGCTTTGGCGGTGATGGCATGCAAAACTTCAGAGAAAAAA‑CGGATTACCCGCCGTAGTTTTGGt > 2:1047182/1‑100 (MQ=255) cGACGTTTGTAATATCACGTCGAAACCTTCTTCTTCAGCTTTGGCGGTGATGGCATGCAAAACTTCAGAGAAAAAA‑CGGATTACCCGCCGTAGTTTTGGt > 1:2907773/1‑100 (MQ=255) cGACGTTTGTAATATCACGTCGAAACCTTCTTCTTCAGCTTTGGCGGTGATGGCATGCAAAACTTCAGAGAAAAAA‑CGGATTACCCGCCGTAGTTTTGGt < 2:564394/100‑1 (MQ=255) gACGTTTGTAATATCACGTCGAAACCTTCTTCTTCAGCTTTGGCGGTGATGGCATGCAAAACTTCAGAGAAAAAA‑CGGATTACCCGCCGTAGTTTTGGTc < 1:93373/100‑1 (MQ=255) gACGTTTGTAATATCACGTCGAAACCTTCTTCTTCAGCTTTGGCGGTGATGGCATGCAAAACTTCAGAGAAAAAA‑CGGATTACCCGCCGTAGTTTTGGTc < 2:1091192/100‑1 (MQ=255) gACGTTTGTAATATCACGTCGAAACCCTCTTCTTCAGCTTTGGCGGTGATGGCATGCAAAACTTCAGAGAAAAAA‑CGGATTACCCGCCGTAGTTTTGGTc > 2:3393/1‑100 (MQ=255) cGTTTGTAATATCACGTCGAAACCTTCTTCTTCAGCTTTGGCGGTGATGGCATGCAAAACTTCAGAGAAAAAA‑CGGATTACCCGCCGTAGTTTTGGt < 2:2019919/97‑1 (MQ=255) cGTTTGTAATATCACGTCGAAACCTTCTTCTTCAGCTTTGGCGGTGATGGCATGCAAAACTTCAGAGAAAAAA‑CGGATTACCCGCCGTAGTTTTGGTCGa > 2:2309809/1‑100 (MQ=255) tGTAATATCACGTCGAAACCTTCTTCTTCAGCTTTGGCGGTGATGGCATGCAAAACTTCAGAGAAAAAA‑CGGATTACCCGCCGTAGTTTTGGTCGAACgg > 1:1876609/1‑100 (MQ=255) gTAATATCACGTCGAAACCTTCTTCTTCAGCTTTGGCGGTGATGGCATGCAAAACTTCAGAG‑AAAAAGCGGATTACCCGCCGTAGTTTTGGTCGAACggg < 1:2897721/100‑1 (MQ=255) tAATATCACGTCGAAACCTTCTTCTTCAGCTTTGGCGGTGATGGCATGCAAAACTTCAGAGAAAAAA‑CGGATTACCCGCCGTAGTTTTGGTCGAACGGGt > 2:2754549/1‑100 (MQ=255) tCACGTCGAAACCTTCTTCTTCAGCTTTGGCGGTGATGGCATGCAAAACTTCAGAGAAAAAA‑CGGATTACCCGCCGTAGTTTTGGTCGAACGGGTAGaaa > 2:301929/1‑100 (MQ=255) tCACGTCGAAACCTTCTTCTTCAGCTTTGGCGGTGATGGCATGCAAAACTTCAGAGAAAAAA‑CGGATTACCCGCCGTAGTTTTGGTCGAACGGGTAGaaa < 2:2323743/100‑1 (MQ=255) cACGTCGAAACCTTCTTCTTCAGCTTTGGCGGTGATGGCATGCAAAACTTCAGAGAAAAAA‑CGGATTACCCGCCGTAGTTTTGGTCGAACGGGTAGAAAt > 1:2304220/1‑100 (MQ=255) cACGTCGAAACCTTCTTCTTCAGCTTTGGCGGTGATGGCATGCAAAACTTCAGAGAAAAAA‑CGGATTACCCGCCGTAGTTTTGGTCGAACGGGTAGAAAt < 1:1034670/100‑1 (MQ=255) aCGTCGAAACCTTCTTCTTCAGCTTTGGCGGTGATGGCATGCAAAACTTCAGAGAAAAAA‑CGGATTACCCGCCGTAGTTTTGGTCGAACGGGTAGAAATc > 2:2304466/1‑100 (MQ=255) cGTCGAAACCTTCTTCTTCAGCTTTGGCGGTGATGGCATGCAAAACTTCAGAGAAAAAA‑CGGATTACCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCa > 2:2553550/1‑100 (MQ=255) gTCGAAACCTTCTTCTTCAGCTTTGGCGGTGATGGCATGCAAAACTTCAGAGAAAAAA‑CGGATTACCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCAc < 1:1494133/100‑1 (MQ=255) gTCGAAACCTTCTTCTTCAGCTTTGGCGGTGATGGCATGCAAAACTTCAGAG‑AAAAA‑CGGATTACCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCAcc < 1:1900457/100‑1 (MQ=255) tCGAAACCTTCTTCTTCAGCTTTGGCGGTGATGGCATGCAAAACTTCAGAGAAAAAA‑CGGATTACCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCAcc > 2:364887/1‑100 (MQ=255) tCGAAACCTTCTTCTTCAGCTTTGGCGGTGATGGCATGCAAAACTTCAGAGAAAAAA‑CGGATTACCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCAcc < 2:1585229/100‑1 (MQ=255) tCGAAACCTTCTTCTTCAGCTTTGGCGGTGATGGCATGCAAAACTTCAGAGAAAAAA‑CGGATTACCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCAcc < 2:841411/100‑1 (MQ=255) cGAAACCTTCTTCTTCAGCTTTGGCGGTGATGGCATGCAAATCTTCAGAGAAAAAA‑CGGATTACCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCa < 2:803118/97‑1 (MQ=255) aaaCCTTCTTCTTCAGCTTTGGCGGTGATGGCATGCAAAACTTCAGAGAAAAAA‑CGGATTACCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATa < 1:1111146/100‑1 (MQ=255) aCCTTCTTCTTCAGCTTTGGCGGTGATGGCATGCAAAACTTCAGAGAAAAAA‑CGGATTACCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAAt < 2:922794/100‑1 (MQ=255) aCCTTCTTCTTCAGCTTTGGCGGTGATGGCATGCAAAACTTCAGAGAAAAAA‑CGGATTACCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAAt > 1:676062/1‑100 (MQ=255) ccTTCTTCTTCAGCTTTGGCGGTGATGGCATGCAAAACTTCAGAGAAAAAA‑CGGATTACCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATg < 2:2948125/100‑1 (MQ=255) cttcttcttCAGCTTTGGCGGTGATGGCATGCAAAACTTCAGAGAAAAAA‑CGGATTACCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATgg > 1:3000507/1‑100 (MQ=255) cttcttcttCAGCTTTGGCGGTGATGACATGCAAAACTTCATAGAAAAAA‑CGGATTACCCTCCGAAGTATTGGTCGAACGGGCAGAAATCACCATAATg > 1:639739/1‑99 (MQ=255) tcttcttcAGCTTTGGCGGTGATGGCATGCAAAACTTCAGAGAAAAAA‑CGGATTACCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCa > 1:2482386/1‑100 (MQ=255) tcttcttcAGCTTTGGCGGTGATGGCATGCAAAACTTCAGAGAAAAAA‑CGGATTACCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCa < 1:1803057/100‑1 (MQ=255) ttcAGCTTTGGCGGTGATGGCATGCAAAACTTCAGAGAAAAAA‑CGGATTACCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCaa < 2:2440461/99‑1 (MQ=255) ttcAGCTTTGGCGGTGATGGCATGCAAAACTTCAGAGAAAAAA‑CGGATTACCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCACAATGGCATCaaa > 2:2711682/1‑100 (MQ=255) tcAGCTTTGGCGGTGATGGCATGCAAAACTTCAGAGAAAAAA‑CGGATTACCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCaaaa < 1:1359503/100‑1 (MQ=255) tcAGCTTTGGCGGTGATGGCATGCAAAACTTCAGAGAAAAAA‑CGGATTACCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCaaaa < 2:1659884/100‑1 (MQ=255) tcAGCTTTGGCGGTGATGGCATGCAAAACTTCAGAGAAAAAA‑CGGATTACCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCaaaa > 1:3010659/1‑100 (MQ=255) aGCTTTGGCGGTGATGGCATGCAAAACTTCAGAGAAAAAA‑CGGATTACCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAAcc < 2:2406007/100‑1 (MQ=255) aGCTTTGGCGGTGATGGCATGCAAAACTTCAGAGAAAAAA‑CGGATTACCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAAcc < 2:554314/100‑1 (MQ=255) aGCTTTGGCGGTGATGGCATGCAAAACTTCAGAGAAAAAA‑CGGATTACCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAAcc < 1:1460468/100‑1 (MQ=255) aGCTTTGGCGGCGATGGCACGCAAAACTTCAGAGAAAAAA‑CGGATTACCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAAcc > 1:48215/1‑100 (MQ=255) cTTTGGCGGTGATGGCATGCAAAACTTCAGAGAAAAAA‑CGGATTACCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCg > 2:2772497/1‑100 (MQ=255) cTTTGGCGGTGATGGCATGCAAAACTTCAGAGAAAAAA‑CGGATTACCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCg > 1:2517725/1‑100 (MQ=255) tttGGCGGTGATGGCATGCAAAACTTCAGAGAAAAAA‑CGGATTACCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGa < 1:1698410/100‑1 (MQ=255) tttGGCGGTGATGGCATGCAAAACTTCAGAGAAAAAA‑CGGATTACCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGa < 1:840055/100‑1 (MQ=255) tGGCGGTGATGGCATGCAAAACTTCAGAGAAAAAA‑CGGATTACCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAag < 1:1037748/100‑1 (MQ=255) tGGCGGTGATGGCATGCAAAACTTCAGAGAAAAAA‑CGGATTACCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAag < 2:1576897/100‑1 (MQ=255) tGGCGGTGATGGCATGCAAAACTTCAGAGAAAAAA‑CGGATTACCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAag < 2:1746773/100‑1 (MQ=255) tGGCGGTGATGGCATGCAAAACTTCAGAGAAAAAA‑CGGATTACCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAag < 1:464407/100‑1 (MQ=255) ggCGGTGATGGCATGCAAAACTTCAGAGAAAAAA‑CGGATTACCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAaga < 2:2989639/100‑1 (MQ=255) ggCGGTGATGGCATGCAAAACTTCAGAGAAAAAA‑CGGATTACCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAaga > 1:357062/1‑100 (MQ=255) cGGTGATGGCATGCAAAACTTCAGAG‑AAAAA‑CGGATTACCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGt > 2:2697065/1‑100 (MQ=255) gATGGCATGCAAAACTTCAGAGAAAAAA‑CGGATTACCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAg < 1:1038324/100‑1 (MQ=255) gATGGCATGCAAAACTTCAGAGAAAAAA‑CGGATTACCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAg < 2:690291/100‑1 (MQ=255) gATGGCATGCAAAACTTCAGAGAAAAAA‑CGGATTACCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAg < 1:1848629/100‑1 (MQ=255) aTGGCATGCAAAACTTCAGAGAAAAAA‑CGGATTACCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAgc < 1:2284560/100‑1 (MQ=255) tGGCATGCAAAACTTCAGAGAAAAAA‑CGGATTACCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAgcg > 2:2644759/1‑100 (MQ=255) gCATGCAAAACTTCAGAGAAAAAA‑CGGATTACCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAgcgcg > 2:1795227/1‑100 (MQ=255) tGCAAAACTTCAGAGAAAAAA‑CGGATTCCCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCgg < 2:2626309/100‑1 (MQ=255) gCAAAACTTCAGAGAAAAAA‑CGGATTCCCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCggg < 1:1521572/100‑1 (MQ=255) gCAAAACTTCAGAGAAAAAA‑CGGATTACCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGcgcgcgcg < 1:2067301/100‑3 (MQ=255) gCAAAACTTCAGAGAAAAAA‑CGGATTACCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCggg > 2:528161/1‑100 (MQ=255) gCAAAACTTCAGAGAAAAAA‑CGGATTACCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCggg > 1:1366288/1‑100 (MQ=255) gCAAAACTTCAGAGAAAAAA‑CGGATTACCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCggg < 1:660522/100‑1 (MQ=255) cAAAACTTCAGAGAAAAAA‑CGGATTACCCGCCGTGGTTTTGGTCGAACGGGTAGAAATCACCATAACGGCATCACAACCCGAAGCGGTCAGCGCGCGGGc > 1:533109/1‑100 (MQ=255) cAAAACTTCAGAGAAAAAA‑CGGATTACCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGc > 1:1723930/1‑100 (MQ=255) aaaCTTCAGAGAAAAAA‑CGGATTACCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGCCa > 2:2944262/1‑100 (MQ=255) cTTCAGAGAAAAAA‑CGGATTACCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGCCAGCt < 1:202497/100‑1 (MQ=255) cTTCAGAGAAAAAA‑CGGATTACCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGCCAGCt < 1:438642/100‑1 (MQ=255) ttCAGAGAAAAAA‑CGGATTACCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGCCAGCtt > 1:1624810/1‑100 (MQ=255) | GCATTTTTGCAGATCTTCTGCCGGATTGTGCGACGTTTGTAATATCACGTCGAAACCTTCTTCTTCAGCTTTGGCGGTGATGGCATGCAAAACTTCAGAG‑AAAAA‑CGGATTACCCGCCGTAGTTTTGGTCGAACGGGTAGAAATCACCATAATGGCATCAAAACCCGAAGAGGTCAGCGCGCGGGCCAGCTT > NC_000913/1383623‑1383814 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |