| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,227,340 | (C)6→7 | pseudogene (1270/1287 nt) | mdtQ ← | pseudogene; putative channel/filament proteins |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,227,334 | 1 | . | C | 97.8% | 310.8 / 0.1 | 90 | pseudogene (1276/1287 nt) | mdtQ | pseudogene; putative channel/filament proteins |
| Reads supporting (aligned to +/- strand): ref base . (1/1); new base C (50/38); total (51/39) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CGAATCGGAGGCGGTAATAATCGCAACCTGTGCCATCGAGTTCTCCACTTAACGCTGAATAAACGTTAAGTATAGAAGGCGCATATCATCAGCGTTTGT‑A‑CC‑CCCCGCCCAACGCACCAGTGAGTTGAATGGAGGCATCCAGCCACTGCCCTTGCAATAACAGGCCATTGGCCCGCTCACGCAGCGCGGGGAT > NC_000913/2227235‑2227427 | cGAATCGGAGGCGGTAATAATCGCAACCTGTGCCATCGAGTTCTCCACTTAACGCTGAATAAACGTTAAGTATAGAAGGCGCATATCATCAGCGTTTGT‑a < 2:2083243/100‑1 (MQ=255)cGAATCGGAGGCGGTAATAATCGCAACCTGTGCCATCGAGTTCTCCACTTAACGCTGAATAAACGTTAAGTATAGAAGGCGCATATCATCAGCGTTTGT‑a < 2:9146/100‑1 (MQ=255) gAGGCGGTAATAATCGCAACCTGTGCCATCGAGTTCTCCACTTAACGCTGAATAAACGTTAAGTATAGAAGGCGCATATCATCAGCGTTTGT‑A‑cc‑ccccc < 2:2203375/100‑2 (MQ=255) aGGCGGTAATAATCGCAACCTGTGCCATCGAGTTCTCCACTTAACGCTGAATAAACGTTAAGTATAGAAGGCGCATATCATCAGCGTTTGT‑A‑cc‑cccccg > 2:2468123/1‑98 (MQ=255) cGGTAATAATCGCAACCTGTGCCATCGAGTTCTCCACTTAACGCTGAATAAACGTTAAGTATAGAAGGCGCATATCATCAGCGTTTGT‑A‑cc‑cccccgccc > 1:2254623/1‑95 (MQ=255) cGGTAATAATCGCAACCTGTGCCATCGAGTTCTCCACTTAACGCTGAATAAACGTTAAGTATAGAAGGCGCATATCATCAGCGTTTGT‑A‑cc‑cccccgccc < 2:1912356/100‑6 (MQ=255) ggTAATAATCGCAACCTGTGCCATCGAGTTCTCCACTTAACGCTGAATAAACGTTAAGTATAGAAGGCGCATATCATCAGCGTTTGT‑ACCC‑CCCCGCCCa > 1:2872991/1‑100 (MQ=255) gTAATAATCGCAACCTGTGCCATCGAGTTCTCCACTTAACGCTGAATAAACGTTAAGTATAGAAGGCGCATATCATCAGCGTTTGT‑ACCC‑CCCCGCCCaa > 2:2496954/1‑100 (MQ=255) taataaTCGCAACCTGTGCCATCGAGTTCTCCACTTACCGCTGAATAAACGTTAAGTATAGAAGGCGCATATCATCAGCGTTTGT‑ACCC‑CCCCGCCCAAc < 2:1137259/100‑1 (MQ=255) taataaTCGCAACCTGTGCCATCGAGTTCTCCACTTAACGCTGAATAAACGTTAAGTATAGAAGGCGCATATCATCAGCGTTTGT‑ACCC‑CCCCGCCCAAc < 2:626792/100‑1 (MQ=255) ataatCGCAACCTGTGCCATCGAGTTCTCCACTTAACGCTGAATAAACGTTAAGTATAGAAGGCGCATATCATCAGCGTTTGT‑ACCC‑CCCCGCCCAACGc > 2:89274/1‑100 (MQ=255) ataatCGCAACCTGTGCCATCGAGTTCTCCACTTAACGCTGAATAAACGTTAAGTATAGAAGGCGCATATCATCAGCGTTTGT‑ACCC‑CCCCGCCCAACGc < 1:1077399/100‑1 (MQ=255) aatCGCAACCTGTGCCATCGAGTTCTCCCCTTAACGCTTAATAAACGTTAAGTATAGAAGGCGCATATCATCAGCGTTTGT‑ACCC‑CCCCGCCCAACGCAc < 2:1270221/100‑1 (MQ=255) aatCGCAACCTGTGCCATCGAGTTCTCCACTTAACGCTGAATAAACGTTAAGTATAGAAGGCGCATATCATCAGCGTTTGT‑ACCC‑CCCCGCCCAACGCAc < 2:786395/100‑1 (MQ=255) atCGCAACCTGTGGCATCGAGTTCTCCACTTAACGCTGCCTAAACGTTAAGTATAGAACGCGCATCGAAGCAGCGATTGTAA‑CC‑CCCCGCCCAACGCAcc > 2:1887193/1‑100 (MQ=255) atCGCAACCTGTGCCATCGAGTTCTCCACTTAACGCTGAATAAACGTTAAGTATAGAAGGCGCATATCATCAGCGTTTGT‑ACCC‑CCCCGCCCAACGCAcc < 1:2610268/100‑1 (MQ=255) cAACCTGTGCCATCGAGTTCTCCACTTAACGCTGAATAAACGTTAAGTATAGAAGGCGCATATCATCAGCGTTTGT‑ACCC‑CCCCGCCCAACGCACCAGTg < 2:247583/100‑1 (MQ=255) cAACCTGTGCCATCGAGTTCTCCACTTAACGCTGAATAAACGTTAAGTATAGAAGGCGCATATCATCAGCGTTTGT‑ACCC‑CCCCGCCCAACGCACCAGTg < 1:2473579/100‑1 (MQ=255) cAACCTGTGCCATCGAGTTCTCCACTTAACGCTGAATAAACGTTAAGTATAGAAGGCGCATATCATCAGCGTTTGT‑ACCC‑CCCCGCCCAACGCACCAGTg < 1:2466246/100‑1 (MQ=255) cAACCTGTGCCATCGAGTTCTCCACTTAACGCTGAATAAACGTTAAGTATAGAAGGCGCATATCATCAGCGTTTGT‑ACCC‑CCCCGCCCAACGCACCAGTg > 2:1088262/1‑100 (MQ=255) aCCTGTGCCATCGAGTTCTCCACTTAACGCTGAATAAACGTTAAGTATAGAAGGCGCATATCATCAGCGTTTGT‑ACCC‑CCCCGCCCAACGCACCAGTGAg > 1:2784399/1‑100 (MQ=255) cTGTGCCATCGAGTTCTCCACTTAACGCTGAATAAACGTTAAGTATAGAAGGCGCATATCATCAGCGTTTGT‑ACCC‑CCCCGCCCAACGCACCAGTGAGtt < 1:2902520/100‑1 (MQ=255) cTGTGCCATCGAGTTCTCCACTTAACGCTGAATAAACGTTAAGTATAGAAGGCGCATATCATCAGCGTTTGT‑ACCC‑CCCCGCCCAACGCACCAGTGAGtt > 1:1154196/1‑100 (MQ=255) gCCATCGAGTTCTCCACTTAACGCTGAATAAACGTTAAGTATAGAAGGCGCATATCATCAGCGTTTGT‑ACCC‑CCCCGCCCAACGCACCAGTGAGTTGAAt < 1:1945338/100‑1 (MQ=255) gCCATCGAGTTCTCCACTTAACGCTGAATAAACGTTAAGTATAGAAGGCGCATATCATCAGCGTTTGT‑ACCC‑CCCCGCCCAACGCACCAGTGAGTTGAAt > 2:96976/1‑100 (MQ=255) ccATCGAGTTCTCCACTTAACGCTGAATAAACGTTAAGTATAGAAGGCGCATATCATCAGCGTTTGT‑ACCC‑CCCCGCCCAACGCACCAGTGAGTTGAATg < 2:1604657/100‑1 (MQ=255) ccATCGAGTTCTCCACTTAACGCTGAATAAACGTTAAGTATAGAACGCTCATATCATCAGCGGTTGT‑ACCC‑CCCCGCCCAACGCACCATTGAGTTGAAt > 2:2546774/1‑99 (MQ=255) cATCGAGTTCTCCACTTAACGCTGAATAAACGTTAAGTATAGAAGGCGCATATCATCAGCGTTTGT‑ACCC‑CCCCGCCCAACGCACCAGTGAGTTGAATg > 2:1595156/1‑99 (MQ=255) aTCGAGTTCTCCACTTAACGCTGAATAAACGTTAAGTATAGAAGGCGCATATCATCAGCGTTTGT‑ACCC‑CCCCGCCCAACGCACCAGTGAGTTGAATGGa > 2:1480310/1‑100 (MQ=255) tCGAGTTCTCCACTTAACGCTGAATAAACGTTAAGTATAGAAGGCGCATATCATCAGCGTTTGT‑A‑CCTCCCCGCCCAACGCACCAGTGAGTTGAATGGAg < 1:2893122/100‑1 (MQ=255) cGAGTTCTCCACTTAACGCTGAATAAACGTTAAGTATAGAAGGCGCATATCATCAGCGTTTGT‑ACCC‑CCCCGCCCAACGCACCAGTGAGTTGAATGGAgg < 1:1361710/100‑1 (MQ=255) cGAGTTCTCCACTTAACGCTGAATAAACGTTAAGTATAGAAGGCGCATATCATCAGCGTTTGT‑ACCC‑CCCCGCCCAACGCACCAGTGAGTTGAATGGAgg < 2:3040974/100‑1 (MQ=255) gTTCTCCACTTAACGCTGAATAAACGTTAAGTATAGAAGGCGCATATCATCAGCGTTTGT‑ACCC‑CCCCGCCCAACGCACCAGTGAGTTGAATGGAGGCAt > 2:860890/1‑100 (MQ=255) gTTCTCCACTTAACGCTGAATAAACGTTAAGTATAGAAGGCGCATATCATCAGCGTTTGT‑ACCC‑CCCCGCCCAACGCACCAGTGAGTTGAATGGAGGCAt > 2:860889/1‑100 (MQ=255) ttCTCCACTTAACGCTGAATAAACGTTAAGTATAGAAGGCGCATATCATCAGCGTTTGT‑ACCC‑CCCCGCCCAACGCACCAGTGAGTTGAATGGAGGCATc < 2:2788913/100‑1 (MQ=255) tctcCACTTAACGCTGAATAAACGTTAAGTATAGAAGGCGCATATCATCAGCGTTTGT‑ACCC‑CCCCGCCCCACGCACCAGTGAGTTGAATGGAGGCATcc > 2:2596908/1‑100 (MQ=255) tctcCACTTAACGCTGAATAAACGTTAAGTATAGAAGGCGCATATCATCAGCGTTTGT‑ACCC‑CCCCGCCCAACGCACCAGTGAGTTGAATGGAGGCATcc > 2:1548415/1‑100 (MQ=255) ctcCACTTAACGCTGAATAAACGTTAAGTATAGAAGGCGCATATCATCAGCGTTTGT‑ACCC‑CCCCGCCCAACGCACCAGTGAGTTGAATGGAGGCATCCa > 1:1560979/1‑100 (MQ=255) ctcCACTTAACGCTGAATAAACGTTAAGTATAGAAGGCGCATATCATCAGCGTTTGT‑ACCC‑CCCCGCCCAACGCACCAGTGAGTTGAATGGAGGCATCCa > 2:102559/1‑100 (MQ=255) ctcCACTTAACGCTGAATAAACGTTAAGTATAGAAGGCGCATATCATCAGCGTTTGT‑ACCC‑CCCCGCCCAACGCACCAGTGAGTTGAATGGAGGCATCCa > 2:1341250/1‑100 (MQ=255) tcCACTTAACGCTGAATAAACGTTAAGTATAGAAGGCGCATATCATCAGCGTTTGT‑ACCC‑CCCCGCCCAACGCACCAGTGAGTTGAATGGAGGCATCCAg < 1:1654660/100‑1 (MQ=255) ccACTTAACGCTGAATAAACGTTAAGTATAGAAGGCGCATATCATCAGCGTTTGT‑ACCC‑CCCCGCCCAACGCACCAGTGAGTTGAATGGAGGCATCCAGc > 2:1484393/1‑100 (MQ=255) ccACTTAACGCTGAATAAACGTTAAGTATAGAAGGCGCATATCATCAGCGTTTGT‑ACCC‑CCCCGCCCAACGCACCAGTGAGTTGAATGGAGGCATCCAGc < 1:884310/100‑1 (MQ=255) cACTTAACGCTGAATAAACGTTAAGTATAGAAGGCGCATATCATCAGCGTTTGT‑ACCC‑CCCCGCCCAACGCACCAGTGAGTTGAATGGAGGCATCCAGcc < 1:2919175/100‑1 (MQ=255) cACTTAACGCTGAATAAACGTTAAGTATAGAAGGCGCATATCATCAGCGTTTGT‑ACCC‑CCCCGCCCAACGCACCAGTGAGTTGAATGGAGGCATCCAGcc > 2:1169069/1‑100 (MQ=255) aCTTAACGCTGAATAAACGTTAAGTATAGAAGGCGCATATCATCAGCGTTTGT‑ACCC‑CCCCGCCCAACGCACCAGTGAGTTGAATGGAGGCATCCAGCCa > 2:1901376/1‑100 (MQ=255) ttAACGCTGAATAAACGTTAAGTATAGAAGGCGCATATCATCAGCGTTTGT‑ACCC‑CCCCGCCCAACGCACCAGTGAGTTGAATGGAGGCATCCAGCCACt > 1:703724/1‑100 (MQ=255) aCGCTGAATAAACGTTAAGTATAGAAGGCGCATATCATCAGCGTTTGT‑ACCC‑CCCCGCCCAACGCACCAGTGAGTTGAATGGAGGCATCCAGCCACTGcc < 1:400760/100‑1 (MQ=255) aCGCTGAATAAACGTTAAGTATAGAAGGCGCATATCATCAGCGTTTGT‑ACCC‑CCCCGCCCAACGCACCAGTGAGTTGAATGGAGGCATCCAGCCACTGcc > 1:2960142/1‑100 (MQ=255) cgcaaaaTAAACGTTAAGTATAAAAGGCGCATATCATAAGCGTTTGT‑ACCC‑CCCCGCCCAACGCACCAGTGAGTTGAATGGAGGCATCCAGCGACTGc > 2:1644085/6‑98 (MQ=255) cGCTGAATAAACGTTAAGTATAGAAGGCGCATATCATCAGCGTTTGT‑ACCC‑CCCCGCCCAACGCACCAGTGAGTTGAATGGAGGCATCCAGCCACTGccc > 2:1433835/1‑100 (MQ=255) cGCTGAATAAACGTTAAGTATAGAAGGCGCATATCATCAGCGTTTGT‑ACCC‑CCCCGCCCAACGCACCAGTGAGTTGAATGGAGGCATCCAGCCACTGccc > 1:2265011/1‑100 (MQ=255) gCTGAATAAACGTTAAGTATAGAAGGCGCATATCATCAGCGTTTGT‑ACCC‑CCCCGCCCAACGCACCAGTGAGTTGAATGGAGGCATCCAGCCACTGCCCt < 2:2923047/100‑1 (MQ=255) cTGAATAAACGTTAAGTATAGAAGGCGCATATCATCAGCGTTTGT‑ACCC‑CCCCGCCCAACGCACCAGTGAGTTGAATGGAGGCATCCAGCCACTGCCCtt < 2:355137/100‑1 (MQ=255) tGAATAAACGTTAAGTATAGAAGGCGCATATCATCAGCGTTTGT‑ACCC‑CCCCGCCCAACGCACCAGTGAGTTGAATGGAGGCATCCAGCCACTGCCCtgg < 1:2068051/100‑3 (MQ=255) gAATAAACGTTAAGTATAGAAGGCGCATATCATCAGCGTTTGT‑ACCC‑CCCCGCCCAACGCACCAGTGAGTTGAATGGAGGCATCCTGCCACTGCCCTTg < 2:1889431/99‑1 (MQ=255) gAATAAACGTTAAGTATAGAAGGCGCATATCATCAGCGTTTGT‑ACCC‑CCCCGCCCAACGCACCAGTGAGTTGAATGGAGGCATCCAGCCACTGCCCTTGc > 1:1529462/1‑100 (MQ=255) gAATAAACGTTAAGTATAGAAGGCGCATATCATCAGCGTTTGT‑ACCC‑CCCCGCCCAACGCACCAGTGAGTTGAATGGAGGCATCCAGCCACTGCCCTTGc > 1:1420138/1‑100 (MQ=255) gAATAAACGTTAAGTATAGAAGGCGCATATCATCAGCGTTTGT‑ACCC‑CCCCGCCCAACGCACCAGTGAGTTGAATGGAGGCATCCAGCCACTGCCCTTGc < 2:2123983/100‑1 (MQ=255) gAATAAACGTTAAGTATAGAAGGCGCATATCATCAGCGTTTGT‑ACCC‑CCCCGCCCAACGCACCAGTGAGTTGAATGGAGGCATCCAGCCACTGCCCTTGc < 2:2028334/100‑1 (MQ=255) gAATAAACGTTAAGTATAGAAGGCGCATATCATCAGCGTTTGT‑ACCC‑CCCCGCCCAACGCACCAGTGAGTTGAATGGAGGCATCCAGCCACTGCCCTTGc < 2:1933960/100‑1 (MQ=255) gAATAAACGTTAAGTATAGAAGGCGCATATCATCAGCGTTTGT‑ACCC‑CCCCGCCCAACGCACCAGTGAGTTGAATGGAGGCATCCAGCCACTGCCCTTGc < 1:2197346/100‑1 (MQ=255) aaTAAACGTTAAGTATAGAAGGCGCATATCATCAGCGTTTGT‑ACCC‑CCCCGCCCAACGCACCAGTGAGTTGAATGGAGGCATCCAGCCACTGCCCTTGc < 2:2343948/99‑1 (MQ=255) aTAAACGTTAAGTATAGAAGGCGCATATCATCAGCGTTTGT‑ACCC‑CCCCGCCCAACGCACCAGTGAGTTGAATGGAGGCATCCAGCCACTGCCCTTGCaa < 1:979491/100‑1 (MQ=255) aTAAACGTTAAGTATAGAAGGCGCATATCATCAGCGTTTGT‑ACCC‑CCCCGCCCAACGCACCAGTGAGTTGAATGGAGGCATCCAGCCACTGCCCTTGCaa < 2:386584/100‑1 (MQ=255) tAAACGTTAAGTATAGAAGGCGCATATCATCAGCGTTTGT‑ACCC‑CCCCGCCCAACGCACCAGTGAGTTGAATGGAGGCATCCAGCCACTGCCCTTGCAAt < 2:608236/100‑1 (MQ=255) tAAACGTTAAGTATAGAAGGCGCATATCATCAGCGTTTGT‑ACCC‑CCCCGCCCAACGCACCAGTGAGTTGAATGGAGGCATCCAGCCACTGCCCTTGCAAt > 2:491178/1‑100 (MQ=255) tAAACGTTAAGTATAGAAGGCGCATATCATCAGCGTTTGT‑ACCC‑CCCCGCCCAACGCACCAGTGAGTTGAATGGAGGCATCCAGCCACTGCCCTTGCAAt < 2:3022075/100‑1 (MQ=255) tAAACGTTAAGTATAGAAGGCGCATATCATCAGCGTTTGT‑ACCC‑CCCCGCCCAACGCACCAGTGAGTTGAATGGAGGCATCCAGCCACTGCCCTTGCAAt > 1:1618757/1‑100 (MQ=255) tAAACGTTAAGTATAGAAGGCGCATATCATCAGCGTTTGT‑ACCC‑CCCCGCCCAACGCACCAGTGAGTTGAATGGAGGCATCCAGCCACTGCCCTTGCAAt < 2:1560961/100‑1 (MQ=255) aaCGTTAAGTATAGAAGGCGTATATCATCAGCGTTTGT‑ACCC‑CCCCGCCCAACGCACCAGTGAGTTGAATGGAGGCATCCCGCCACTGCCCTTGCACTaa > 2:280385/1‑100 (MQ=255) gTTAAGTATAGAAGGCGCATATCATCAGCGTTTGT‑ACCC‑CCCCGCCCAACGCACCAGTGAGTTGAATGGAGGCATCCAGCCACTGCCCTTGCAATAACAg > 2:444013/1‑100 (MQ=255) tAAGTATAGAAGGCGCATATCATCAGCGTTTGT‑ACCC‑CCCCGCCCAACGCACCAGTGAGTTGAATGGAGGCATCCAGCCACTGCCCTTGCAATAACAGGc > 2:2778817/1‑100 (MQ=255) tAAGTATAGAAGGCGCATATCATCAGCGTTTGT‑ACCC‑CCCCGCCCAACGCACCAGTGAGTTGAATGGAGGCATCCAGCCACTGCCCTTGCAATAACAGGc < 1:2409107/100‑1 (MQ=255) gAAGGCGCATATCATCAGCGTTTGT‑ACCC‑CCCCGCCCAACGCACCAGTGAGTTGAATGGAGGCATCCAGCCACTGCCCTTGCAATAACAGGCCATTGGcc > 1:228916/1‑100 (MQ=255) gAAGGCGCATATCATCAGCGTTTGT‑ACCC‑CCCCGCCCAACGCACCAGTGAGTTGAATGGAGGCATCCAGCCACTGCCCTTGCAATAACAGGCCATTGGcc < 1:161548/100‑1 (MQ=255) gAAGGCGCATATCATCAGCGTTTGT‑ACCC‑CCCCGCCCAACGCACCAGTGAGTTGAATGGAGGCATCCAGCCACTGCCCTTGCAATAACAGGCCATTGGcc < 1:2981231/100‑1 (MQ=255) aGGCGCATATCATCAGCGTTTGT‑ACCC‑CCCCGCCCAACGCACCAGTGAGTTGAATGGAGGCATCCAGCCACTGCCCTTGCAATAACAGGCCATTGGCCCg > 2:756656/1‑100 (MQ=255) aGGCGCATATCATCAGCGTTTGT‑ACCC‑CCCCGCCCAACGCACCAGTGAGTTGAATGGAGGCATCCAGCCACTGCCCTTGCAATAACAGGCCATTGGCCCg > 1:2081270/1‑100 (MQ=255) cgcATATCATCAGCGTTTGT‑ACCC‑CCCCGCCCAACGCACCAGTTAGTTGAATGGAGGCATCCAGCCACTGCCCTTGCAATAACAGGCCATTGGCCCGCTc > 2:1041098/1‑100 (MQ=255) cgcATATCATCAGCGTTTGT‑ACCC‑CCCCGCCCAACGCACCAGTGAGTTGAATGGAGGCATCCAGCCACTGCCCTTGCAATAACAGGCCATTGGCCCGCTc > 1:3040058/1‑100 (MQ=255) cgcATATCATCAGCGTTTGT‑ACCC‑CCCCGCCCAACGCACCAGTGAGTTGAATGGAGGCATCCAGCCACTGCCCTTGCAATAACAGGCCATTGGCCCGCTc > 2:281245/1‑100 (MQ=255) cgcATATCATCAGCGTTTGT‑ACCC‑CCCCGCCCAACGCACCAGTGAGTTGAATGGAGGCATCCAGCCACTGCCCTTGCAATAACAGGCCATTGGCCCGCTc > 1:237612/1‑100 (MQ=255) cgcATATCATCAGCGTTTGT‑ACCC‑CCCCGCCCAACGCACCAGTGAGTTGAATGGAGGCATCCAGCCACTGCCCTTGCAATAACAGGCCATTGGCCCGCTc > 2:2128771/1‑100 (MQ=255) catcaGCGTTTGT‑ACCC‑CCCCGCCCAACGCACCAGTGAGTTGAATGGAGGCATCCAGCCACTGCCCTTGCAATAACAGGCCATTGGCCCGCTCACGCAgc > 1:1507966/1‑100 (MQ=255) catcaGCGTTTGT‑ACCC‑CCCCGCCCAACGCACCAGTGAGTTGAATGGAGGCATCCAGCCACTGCCCTTGCAATAACAGGCCATTGGCCCGCTCACGCAgc > 1:1057449/1‑100 (MQ=255) catcaGCGTTTGT‑ACCC‑CCCCGCCCAACGCACCAGTGAGTTGAATGGAGGCATCCAGCCACTGCCCTTGCAATAACAGGCCATTGGCCCGCTCACGCAgc > 2:2318866/1‑100 (MQ=255) catcaGCGTTTGT‑ACCC‑CCCCGCCCAACGCACCAGTGAGTTGAATGGAGGCATCCAGCCACTGCCCTTGCAATAACAGGCCATTGGCCCGCTCACGCAgc > 1:523968/1‑100 (MQ=255) atcaGCGTTTGT‑ACCC‑CCCCGCCCAACGCACCAGTGAGTTGAATGGAGGCATCCAGCCACTGCCCTTGCAATAACAGGCCATTGGCCCGCTCACGCAgcg > 2:800520/1‑100 (MQ=255) atcGTTTGT‑ACCC‑CCCCGCCCAACGCACCAGTGAGTTGAATGGAGGCATCCAGCCACTGCCCTTGCAATAACAGGCCATTGGCCCGCTCACGCAGCGCgg > 1:2067794/3‑100 (MQ=255) aGCGTTTGT‑ACCC‑CCCCGCCCAACGCACCAGTGAGTTGAATGGAGGCATCCAGCCACTGCCCTTGCAATAACAGGCCATTGGCCCGCTCACGCAGCGCgg > 1:869283/1‑100 (MQ=255) aGCGTTTGT‑ACCC‑CCCCGCCCAACGCACCAGTGAGTTGAATGGAGGCATCCAGCCACTGCCCTTGCAATAACAGGCCATTGGCCCGCTCACGCAGCGCgg > 1:1953267/1‑100 (MQ=255) gCGTTTGT‑ACCC‑CCCCGCCCAACGCACCAGTGAGTTGAATGGAGGCATCCAGCCACTGCCCTTGCAATAACAGGCCATTGGCCCGCTCACGCAGCGCggg < 2:2164045/100‑1 (MQ=255) cGTTTGT‑ACCC‑CCCCGCCCAACGCACCAGTGAGTTGAATGGAGGCATCCAGCCACTGCCCTTGCAATAACAGGCCATTGGCCCGCTCACGCAGCGCgggg < 1:1041109/100‑1 (MQ=255) gTTTGT‑ACCC‑CCCCGCCCAACGCACCAGTGAGTTGAATGGAGGCATCCAGCCACTGCCCTTGCAATAACAGGCCATTGGCCCGCTCACGCAGCGCGGGGa > 2:2893632/1‑100 (MQ=255) tttGT‑ACCC‑CCCCGCCCAACGCACCAGTGAGTTGAATGGAGGCATCCAGCCACTGCCCTTGCAATAACAGGCCATTGGCCCGCTCACGCAGCGCGGGGAt > 2:2812566/1‑100 (MQ=255) | CGAATCGGAGGCGGTAATAATCGCAACCTGTGCCATCGAGTTCTCCACTTAACGCTGAATAAACGTTAAGTATAGAAGGCGCATATCATCAGCGTTTGT‑A‑CC‑CCCCGCCCAACGCACCAGTGAGTTGAATGGAGGCATCCAGCCACTGCCCTTGCAATAACAGGCCATTGGCCCGCTCACGCAGCGCGGGGAT > NC_000913/2227235‑2227427 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |