| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,809,774 | (T)7→8 | coding (158/738 nt) | ygaZ → | putative L‑valine exporter, norvaline resistance protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,809,767 | 1 | . | T | 93.3% | 287.2 / 12.5 | 89 | coding (151/738 nt) | ygaZ | putative L‑valine exporter, norvaline resistance protein |
| Reads supporting (aligned to +/- strand): ref base . (3/3); new base T (40/43); total (43/46) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 104 total aligned reads displayed.
ATGCAAAGACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑‑T‑T‑TTTTT‑CTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATTGCTGCACTGACCGTCA > NC_000913/2809670‑2809866 | aTGCAAAGACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑‑t‑t < 2:1452630/100‑1 (MQ=255)aTGCAAAGACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑‑t‑t > 2:1043626/1‑100 (MQ=255) cAAAGACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑‑t‑t‑ttt > 1:329155/1‑100 (MQ=255) cAAAGACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑‑t‑t‑ttt < 1:158563/100‑1 (MQ=255) cAAAGACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑‑t‑t‑ttt > 1:1900914/1‑100 (MQ=255) aaGACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑‑t‑t‑ttttt < 1:1493287/100‑1 (MQ=255) aaGACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑‑t‑t‑ttttt < 2:2331403/100‑1 (MQ=255) gACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑‑t‑t‑ttttttc < 2:1443767/100‑3 (MQ=255) gACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑‑t‑t‑ttttttc < 2:2775712/100‑3 (MQ=255) aCAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑‑t‑t‑ttttttct < 1:815854/100‑4 (MQ=255) cAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑‑t‑t‑ttttttctc < 2:1823958/100‑5 (MQ=255) aGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑‑t‑t‑ttttttctcc < 1:1247362/100‑6 (MQ=255) aGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑‑t‑t‑ttttttctcc < 1:2025308/100‑6 (MQ=255) gTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑T‑T‑TTTTT‑CTCCt > 2:2845366/1‑100 (MQ=255) tttATCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑T‑T‑TTTTT‑CTCCTg < 2:425877/100‑1 (MQ=255) tttACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑T‑T‑TTTTT‑CTCCTg < 2:1815715/100‑1 (MQ=255) ttACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑T‑T‑TTTTT‑CTCCTGc > 1:2740563/1‑100 (MQ=255) ttACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑‑T‑T‑TTTTT‑CTCCTGca > 2:2255371/1‑100 (MQ=255) tACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑T‑T‑TTTTT‑CTCCTGca > 2:67118/1‑100 (MQ=255) aCCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑T‑T‑TTTTT‑CTCCTGcat > 2:2211885/1‑100 (MQ=255) aCCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCCCTCCTCTCGAAAGCGT‑T‑T‑TTTTT‑CTCCTGcat > 2:122987/1‑100 (MQ=255) ccGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑T‑T‑TTTTT‑CTCCTGcatc > 1:2967103/1‑100 (MQ=255) cGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑T‑T‑TTTTT‑CTCCTGcatca > 1:449111/1‑100 (MQ=255) cGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑T‑T‑TTTTT‑CTCCTGcatca < 1:1574731/100‑1 (MQ=255) gATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑T‑T‑TTTTT‑CTCCTGcatcat > 1:3006372/1‑100 (MQ=255) gATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑T‑T‑TTTTT‑CTCCTGcatcat > 1:2821287/1‑100 (MQ=255) aTTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑T‑T‑TTTTT‑CTCCTGCATCAtt < 1:210924/100‑1 (MQ=255) aTTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑T‑T‑TTTTT‑CTCCTGCATCAtt < 2:2439795/100‑1 (MQ=255) ttattaGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑T‑T‑TTTTT‑CTCCTGCATCATTTATg > 1:2252773/1‑100 (MQ=255) ttattaGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑T‑T‑TTTTT‑CTCCTGCATCATTTATg < 1:2700457/100‑1 (MQ=255) tattaGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑T‑T‑TTTTT‑CTCCTGCATCATTTATGc > 1:1286466/1‑100 (MQ=255) tattaGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑T‑T‑TTTTT‑CTCCTGCATCATTTATGc < 2:1335032/100‑1 (MQ=255) tattaGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGGCTGGGATGCTCTCCTCTCGAAAGCG‑‑TGT‑TTTTT‑CTCCTGCATCATTTCTGc > 2:1014739/1‑100 (MQ=255) tattaGTTATATTCCGGTGGCCTTTGCGTTCGGGCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑‑T‑TATTTTT‑ATTCTGCATCATTTAttc > 2:613289/1‑98 (MQ=255) attaGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑T‑T‑TTTTT‑CTCCTGCATCATTTATGCa > 2:81324/1‑100 (MQ=255) aGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑T‑T‑TTTTT‑CTCCTGCATCATTTATGCAGgc > 1:967417/1‑100 (MQ=255) ttATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑T‑T‑TTTTT‑CTCCTGCATAAATGATGCAggaga < 1:262923/100‑4 (MQ=255) tataTTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGCAAGCGT‑T‑T‑TTTTT‑CTCCTGCATCATTTATGCAGGcgcg < 2:1877731/100‑1 (MQ=255) tataTTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑T‑T‑TTTTT‑CTCCTGCATCATTTATGTAGGcgcg < 1:1609988/100‑1 (MQ=255) tataTTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑T‑T‑TTTTT‑CTCCTGCATCATTTATGCAGGcgcg > 1:867752/1‑100 (MQ=255) tataTTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑T‑T‑TTTTT‑CTCCTGCATCATTTATGCAGGcgcg > 1:760058/1‑100 (MQ=255) tatTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑T‑T‑TTTTT‑CTCCTGCATCATTTATGCAGGCGCGAg < 2:2774177/100‑1 (MQ=255) tatTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑T‑T‑TTTTT‑CTCCTGCATCATTTATGCAGGCGCGAg > 2:2297286/1‑100 (MQ=255) tatTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑T‑T‑TTTTT‑CTCCTGCATCATTTATGCAGGCGCGAg < 1:2296409/100‑1 (MQ=255) tatTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑T‑T‑TTTTT‑CTCCTGCATAAATGATGCAggagaaaa < 1:668632/100‑7 (MQ=255) atTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑T‑T‑TTTTT‑CTCCTGCATCATTTATGCAGGCGCGAGc < 1:1792731/100‑1 (MQ=255) ttCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑T‑T‑TTTTT‑CTCCTGCATAAATGATGCAggagaaaaaa < 2:653501/100‑9 (MQ=37) tGGCCTTTGTGTTCGGTCTGAATGCGACCCTTCTGGGATTCTCTCCTCTCGAAAGCGT‑T‑T‑TTTTT‑CTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCg < 1:1720998/100‑1 (MQ=255) tGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑T‑T‑TTTTT‑CTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCg < 2:2040860/100‑1 (MQ=255) tGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑T‑T‑TTTTT‑CTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCg > 1:617136/1‑100 (MQ=255) tGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑T‑T‑TTTTT‑CTCCTCTATCATTTATGCAGGCGCGAGCCAGTTCg > 2:1656943/1‑100 (MQ=255) gggcTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑T‑T‑TTTTT‑CTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCg < 2:350092/96‑1 (MQ=255) ccTTTGCGTTCGGTCTGAATGCGACCCGTCTTGGATTCTCTCCTCTCGAAAGCGT‑T‑T‑TTTTT‑CTCCTGAATCATTTATGCAGGCGCGAGCCAGTTCGTCa < 2:1158188/100‑1 (MQ=255) ccTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑T‑T‑TTTTT‑CTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCa > 1:421344/1‑100 (MQ=255) ccTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑T‑T‑TTTTT‑CTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCa > 1:626160/1‑100 (MQ=255) cgttGCGTTCGGTCTGAATGCGTCCCGTCTGGGATTCTCTCCTCTCGAAAGCGTTT‑T‑TTTTT‑CTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCa < 1:2558215/98‑1 (MQ=255) cTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑T‑T‑TTTTT‑CTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCAt > 1:2545002/1‑100 (MQ=255) gTTCGGTCTGAATGCGTCCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑T‑T‑TTTTT‑CTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACcg < 2:2321822/99‑1 (MQ=255) gTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑T‑T‑TTTTT‑CTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACcgc < 1:2782604/100‑1 (MQ=255) ttCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑T‑T‑TTTTT‑CTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACcgcg < 1:2297315/100‑1 (MQ=255) cGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑T‑T‑TTTTT‑CTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGAt < 2:2316491/100‑1 (MQ=255) ggTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑T‑T‑TTTTT‑CTCCTGCATCCTTTATGCAGGCGCGAGCCAGTTCGTCATTACcgc > 2:1971756/1‑96 (MQ=255) gTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑T‑T‑TTTTT‑TTTCTTTATCATTTATGCAGGCGCGAGCCAGTTCTTTATTACCGCGAt > 2:1908243/1‑98 (MQ=255) cTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑T‑T‑TTTTT‑CTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTg < 1:2508950/100‑1 (MQ=255) cTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑T‑T‑TTTTT‑CTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTg < 2:1862899/100‑1 (MQ=255) gAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑T‑T‑TTTTT‑CTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGc < 1:807797/100‑1 (MQ=255) gAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑T‑T‑TTTTT‑CTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGc > 1:2089372/1‑100 (MQ=255) gCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑T‑T‑TTTTT‑CTCCTGCATCATTTATGCAGGCGCGAGCCAGCTCGTCATTACCGCGATGCTGGCAGcc > 2:2291432/1‑100 (MQ=255) gCGACCCGTCTGGGATTCTCGCCTCACGAATGCG‑‑T‑T‑TTTTTCCGCCTGCATCATGTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGcc < 1:1487557/100‑1 (MQ=255) cGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑T‑T‑TTTTT‑CTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCg > 2:2390984/1‑100 (MQ=255) aCCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑T‑T‑TTTTT‑TTTTTTTTTCATTTATACACGCCCGAGCCAGTTCTTTATTACCTCGATGCTGTCAg > 2:802306/1‑95 (MQ=255) aCCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑T‑T‑TTTTT‑CTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCggg < 2:1639259/100‑1 (MQ=255) aCCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑T‑T‑TTTTT‑CTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCggg < 1:1079680/100‑1 (MQ=255) aCCCGTCTGGGATTCTCTCCTCTCGAAAGCGT‑T‑T‑TTTTT‑CTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCggg > 1:39478/1‑100 (MQ=255) cGTCTGGGATTCTCTCCTCTCGAAAGCG‑‑T‑T‑TTTTTGCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGagt < 2:2339928/100‑1 (MQ=255) tCTGGGATTCTCTCCTCTCGAAAGCGT‑T‑T‑TTTTT‑CTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGagtag > 1:970799/1‑100 (MQ=255) tGGGATTCTCTCCTCTCGAAAGCGT‑T‑T‑TTTTT‑CTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGtt > 2:942676/1‑100 (MQ=255) gATTCTCTCCTCTCGAAAGCGT‑T‑T‑TTTTT‑CTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTtgt > 1:55336/1‑100 (MQ=255) ttCTCTCCTCTCGAAAGCGT‑T‑T‑TTTTT‑CTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTgg < 1:2054032/100‑1 (MQ=255) ttCTCTCCTCTCGAAAGCGT‑T‑T‑TTTTT‑CTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTgg < 1:2022664/100‑1 (MQ=255) ttCTCTCCTCTCGAAAGCGT‑T‑T‑TTTTT‑CTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTgg < 1:2577218/100‑1 (MQ=255) ctctcctctcGAAAGCGT‑T‑T‑TTTTT‑CTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGAt > 1:1357145/1‑100 (MQ=255) ctctcctctcGAAAGCGT‑T‑T‑TTTTT‑CTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGAt < 1:2580476/100‑1 (MQ=255) ctctcctctcGAAAGCGT‑T‑T‑TTTTT‑CTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGAt > 1:1867659/1‑100 (MQ=255) ctctcctctcGAAAGCG‑‑T‑T‑TTTTT‑CTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGAtt < 1:2255400/100‑1 (MQ=255) ctcctctcGAAAGCGT‑T‑T‑TTTTT‑CTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATtg < 1:981188/100‑1 (MQ=255) tcctctcGAAAGCGT‑T‑T‑TTTTT‑CTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATtgc < 1:1773363/100‑1 (MQ=255) tcctctcGAAAGCGT‑T‑T‑TTTTT‑CTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATtgc < 1:61600/100‑1 (MQ=255) ctctcGAAAGCGT‑T‑T‑TTTTT‑CTCCTGCATCACTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATtgctg > 2:1716127/1‑100 (MQ=255) tctcGAAAGCGT‑T‑T‑TTTTT‑CTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATtgctgc > 2:2810916/1‑100 (MQ=255) tctcGAAAGCGT‑T‑T‑TTTTT‑CTACTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATttctgc > 2:1357679/1‑100 (MQ=255) tcGAAAGCGT‑T‑T‑TTTTT‑CTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATTGCTGCAc < 1:1634026/100‑1 (MQ=255) tcGAAAGCGT‑T‑T‑TTTTT‑CTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATTGCTGCAc < 1:389788/100‑1 (MQ=255) cGAAAGCGT‑T‑T‑TTTTT‑CTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATTGCTGCACt < 2:626152/100‑1 (MQ=255) cGAAAGCGT‑T‑T‑TTTTT‑CTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATTGCTGCACt > 1:806747/1‑100 (MQ=255) aaaGCGT‑T‑T‑TTTTT‑CTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGGTGGCAGCCGGGAGTAGTTTGTGGATTGCTGCACTGa < 1:2154824/100‑1 (MQ=255) aaaGCGT‑T‑T‑TTTTT‑CTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGATGGCAGCCGGGAGTAGTTTGTGGATTGCTGCACTGa < 1:2155521/100‑1 (MQ=255) aaGCGT‑T‑T‑TTTTT‑CTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATTGCTGCACTGAc < 1:2411663/100‑1 (MQ=255) aaGCGT‑T‑T‑TTTTT‑CTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATTGCTGCACTGAc < 1:2411303/100‑1 (MQ=255) g‑‑T‑T‑TTTTT‑CTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATTGCTGCACTGACCGTCa < 1:1526217/100‑1 (MQ=255) | ATGCAAAGACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑‑T‑T‑TTTTT‑CTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATTGCTGCACTGACCGTCA > NC_000913/2809670‑2809866 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |