| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,560,326 | 0 | A | G | 23.1% | 284.4 / 88.3 | 148 | T24A (ACA→GCA) | yffL | CPZ‑55 prophage; uncharacterized protein |
| Reads supporting (aligned to +/- strand): ref base A (45/68); new base G (20/14); total (66/82) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.54e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.30e-01 | |||||||||||
Only 100 of 153 total aligned reads displayed.
AAATTATTCAATATCAAGAACTTAAATCCATGTTTGCAACGAAAGATCCAGAGTTCGAAAATAGGATCAACACAAATAAAAGCCCCCGGAATGCTGCAACATGCC‑GGGGGCGGTATGAGAAACAAGCTAAAGGAGAATTTCTCATGTCTGATATGCTAGCAGTAGAACAAGAAACAAACAATGATGTTCGTCAATTTT > NC_000913/2560228‑2560425 | aaaTTATTCAATATCAAGAACTTAAATCCATGTTTGCAACGAAAGATCCAGAGTTCGAAAATAGGATCAACACAAATAAAAGCCCCCGGAATGCTGCAAc < 1:101980/100‑1 (MQ=255) aaTTATTCAATATCAAGAACTTAAATCCATGTTTGCAACGAAAGATCCAGAGTTCGAAAATAGGATCAACACAAATAAAAGCCCCCGGAATGCTGCAACa < 2:2378843/100‑1 (MQ=255) aaTTATTCAATATCAAGAACTTAAATCCATGTTTGCAACGAAAGATCCAGAGTTCGAAAATAGGATCAACACAAATAAAAGCCCCCGGAATGCTGCAACa > 2:2561687/1‑100 (MQ=255) attattCAATATCAAGAACTTAAATCCATGTTTGCAACGAAAGATCCAGAGTTCGAAAATAGGATCAACACAAATAAAAGCCCCCGGAATGCTGCAACAt < 1:1383540/100‑1 (MQ=255) tCAATATCAAGAACTTAAATCCATGTTTGCAACGAAAGATCCAGAGTTCGAAAATAGGATCAACACAAATAAAAGCCCCCGGCATGTTGCAGCATTCC‑gg < 1:12822/100‑1 (MQ=38) tCAATATCAAGAACTTAAATCCATGTTTGCAACGAAAGATCCAGAGTTCGAAAATAGGATCAACACAAATAAAAGCCCCCGGCATGTTGCAGCATTCC‑gg < 1:2898111/100‑1 (MQ=38) cAATATCAAGAACTTAAATCCATGTTTGCAACGAAAGATCCAGAGTTCGAAAATAGGATCAACACAAATAAAAGCCCCCGGCATGTTGCAGCATTCC‑ggg < 2:2473428/100‑1 (MQ=38) cAATATCAAGAACTTAAATCCATGTTTGCAACGAAAGATCCAGAGTTCGAAAATAGGATCAACACAAATAAAAGCCCCCGGAATGCTGCACCATGcc > 2:636395/1‑97 (MQ=255) cAATATCAAGAACTTAAATCCATGTTTGCAACGAAAGATCCAGAGTTCGAAAATAGGATCAACACAAATAAAAGCCCCCGGAATGCTGCAACATGCC‑ggg > 2:1580723/1‑100 (MQ=255) aaTATCAAGAACTTAAATCCATGTTTGCAACGAAAGATCCAGAGTTCGAAAATAGGATCAACACAAATAAAAGCCCCCGGCATGTTGCAGCATTCC‑gggg < 1:1066831/100‑1 (MQ=38) atatCAAGAACTTAAATCCATGTTTGCAACGAAAGATCCAGAGTTCGAAAATAGGATCAACACAAATAAAAGCCCCCGGCATGTTGCAGCATTCC‑ggggg < 1:3819/100‑1 (MQ=38) atatCAAGAACTTAAATCCATGTTTGCAACGAAAGATCCAGAGTTCGAAAATAGGATCAACACAAATAAAAGCCCCCGGCATGTTGCAGCATTCC‑ggggg < 1:2446359/100‑1 (MQ=38) atatCAAGAACTTAAATCCATGTTTGCAACGAAAGATCAAGAGTTCGAAACTAGGATCAACACACATCAAAGCCCCAGGCCTGTTGCCGCATTCC‑ggggg < 2:446551/100‑1 (MQ=255) tatCAAGAACTTAAATCCATGTTTGCAACGAAAGATCGAGAGTTCGAAAATAGGATCAACACAAATAAAAGCCCCCGGAATGCTGCAACATGCC‑GGGGGc > 2:1637818/1‑100 (MQ=255) tatCAAGAACTTAAATCCATGTTTGCAACGAAAGATCCAGAGTTCGAAAATAGGATCAACACAAATAAAAGCCCCCGGCATGTTGCAGCATTCC‑GGGGGc < 2:7437/100‑1 (MQ=38) tatCAAGAACTTAAATCCATGTTTGCAACGAAAGATCCAGAGTTCGAAAATAGGATCAACACAAATAAAAGCCCCCGGAATGCTGCAACATGCC‑GGGGGc < 1:1264433/100‑1 (MQ=255) atCAAGAACTTAAATCCATGTTTGCAACGAAAGATCCAGAGTTCGAAAATAGGATCAACACAAATAAAAGCCCCCGGAATGCTGCAACATGCC‑GGGGGCg < 1:984968/100‑1 (MQ=255) tCAAGAACTTAAATCCATGTTTGCAACGAAAGATCCAGAGTTCGAAAATAGGATCAACACAAATAAAAGCCCCCGGAATGCTGCAACATGCC‑GGGGGCgg < 1:2599976/100‑1 (MQ=255) tCAAGAACTTAAATCCATGTTTGCAACGAAAGATCCAGAGTTCGAAAATAGGATCAACACAAATAAAAGCCCCCGGAATGCTGCAACATGCC‑GGGGGCgg < 1:2306916/100‑1 (MQ=255) cAAGAACTTAAATCCATGTTTGCAACGAAAGATCCAGAGTTCGAAAATAGGATCAACACAAATAAAAGCCCCCGGAATGCTGCAACATGCC‑GGGGGCGGt < 1:982861/100‑1 (MQ=255) cAAGAACTTAAATCCATGTTTGCAACGAAAGATCCAGAGTTCGAAAATAGGATCAACACAAATAAAAGCCCCCGGAATGCTGCAACATGCC‑GGGGGCGGt > 1:154583/1‑100 (MQ=255) aGAACTTAAATCCATGTTTGCAACGAAAGATCCAGAGTTCGAAAATAGGATCAACACAAATAAAAGCCCCCGGAATGCTGCAACATGCC‑GGGGGCGGTAt > 2:728494/1‑100 (MQ=255) aaCTTAAATCCATGTTTGCAACGAAAGATCCAGAGTTCGAAAATAGGATCAACACAAATAAAAGCCCCCGGAATGCTGCAACATGCC‑GGGGGCGGTATga < 1:909262/100‑1 (MQ=255) aCTTAAATCCATGTTTGCAACGAAAGATCCAGAGTTCGAAAATAGGATCAACACAAATAAAAGCCCCCGGAATGCTGCAACATGCC‑GGGGGCGGTATgag < 1:308232/100‑1 (MQ=255) aCTTAAATCCATGTTTGCAACGAAAGATCCAGAGTTCGAAAATAGGATCAACACAAATAAAAGCCCCCGGAATGCTGCAACATGCC‑GGGGGCGGTATgag > 1:2443024/1‑100 (MQ=255) cTTAAATCCATGTTTGCAACGAAAGATCCAGAGTTCGAAAATAGGATCAACACAAATAAAAGCCCCCGGCATGTTGCAGCATTCC‑GGGGGcttttatttg < 1:459154/100‑10 (MQ=21) cTTAAATCCATGTTTGCAACGAAAGATCCAGAGTTCGAAAATAGGATCAACACAAATAAAAGCCCCCGGAATGCTGCAACATGCC‑GGGGGCGGTATgaga > 1:524184/1‑100 (MQ=255) ttAAATCCATGTTTGCAACGAAAGATCCAGAGTTCGAAAATAGGATCAACACAAATAAAAGCCCCCGGAATGCTGCAACATGCC‑GGGGGCGGTATGAGaa < 2:1545081/100‑1 (MQ=255) ttAAATCCATGTTTGCAACGAAAAATCCAGAGTTGGAAAATAGGATCAACACAAATAAAAGCCCCCGGCATGTTGCAGCATTCC‑GGGGGcttttatt < 2:570940/97‑8 (MQ=21) tAAATCCATGTTTGCAACGAAAGATCCAGAGTTCGAAAATAGGATCAACACAAATAAAAGCCCCCGGAATGCTGCAACATGCC‑GGGGGCGGTATGAGaaa > 2:2863172/1‑100 (MQ=255) tAAATCCATGTTTGCAACGAAAGATCCAGAGTTCGAAAATAGGATCAACACAAATAAAAGCCCCCGGAATGCTGCAACATGCC‑GGGGGCGGTATGAGaaa > 1:2321110/1‑100 (MQ=255) aaaTCCATGTTTGCAACGAAAGATCCAGAGTTCGAAAATAGGATCAACACAAATAAAAGCCCCCGGAATGCTGCAACATGCC‑GGGGGCGGTATGAGAAAc < 1:37494/100‑1 (MQ=255) aaaTCCATGTTTGCAACGAAAGATCCAGAGTTCGAAAATAGGATCAACACAAATAAAAGCCCCCGGAATGCTGCAACATGCC‑GGGGGCGGTATGAGAAAc < 1:688556/100‑1 (MQ=255) aaTCCATGTTTGCAACGAAAGATCCAGAGTTCGAAAATAGGATCAACACAAATAAAAGCCCCCGGAATGCTGCAACATGCC‑GGGGGCGGTATGAGAAACa < 1:1427368/100‑1 (MQ=255) aaTCCATGTTTGCAACGAAAGATCCAGAGTTCGAAAATAGGATCAACACAAATAAAAGCCCCCGGAATGCTGCAACATGCC‑GGGGGCGGTATGAGAAACa > 2:1142663/1‑100 (MQ=255) aaTCCATGTTTGCAACGAAAGATCCAGAGTTCGAAAATAGGATCAACACAAATAAAAGCCCCCGGAATGCTGCAACATGCC‑GGGGGCGGTATGAGAAACa > 2:525650/1‑100 (MQ=255) aTCCATGTTTGCAACGAAAGATCCAGAGTTCGAAAATAGGATCAACACAAATAAAAGCCCCCGGAATGCTGCAACATGCC‑GGGGGCGGTATGAGAAACaa < 1:799409/100‑1 (MQ=255) ccATGTTTGCAACGAAAGATCCAGAGTTCGAAAATAGGATCAACACAAATAAAAGCCCCCGGAATGCTGCAACATGCC‑GGGGGCGGTATGAGAAACAAGc < 1:17424/100‑1 (MQ=255) cATGTTTGCAACGAAAGATCCAGAGTTCGAAAATAGGATCAACACAAATAAAAGCCCCCGGAATGCTGCAACATGCC‑GGGGGCGGTATGAGAAACAAGCt > 2:1288748/1‑100 (MQ=255) cATGTTTGCAACGAAAGATCCAGAGTTCGAAAATAGGATCAACACAAATAAAAGCCCCCGGAATGCTGCAACATGCC‑GGGGGCGGTATGAGAAACAAGCt < 2:1676575/100‑1 (MQ=255) tGCAACGAAAGATCCAGAGTTCGAAAATAGGATCAACACAAATAAAAGCCCCCGGAATGCTGCAACATGCC‑GGGGGCGGTATGAGAAACAAGCTAAAGga < 1:613566/100‑1 (MQ=255) cAACGAAAGATCCAGAGTTCGAAAATAGGATCAACACAAATAAAAGCCCCCGGAATGCTGCAACATGCC‑GGGGGCGGTATGAGAAACAAGCTAAAGgaga > 1:2740418/1‑100 (MQ=255) aCGAAAGATCCAGAGTTCGAAAATAGGATCAACACAAATAAAAGCCCCCGGAATGCTGCAACATGCC‑GGGGGCGGTATGAGAAACAAGCTAAAGGAGAAt < 1:1030381/100‑1 (MQ=255) aaGATCCAGAGTGCGAAAATAGGATCAACAGAAATAAAAGCCCCCGGAATGCTGCAACATGTC‑GGGGGCGGTATGAGTAACAAGCTAAAGGAGAAGTtct < 2:1334453/100‑1 (MQ=255) aTCCAGAGTTCGAAAATAGGATCAACACAAATAAAAGCCCCCGGAATGCTGCAACATGCC‑GGGGGCGGTATGAGAAACAAGCTAAAGGAGAATTTCTCAt > 1:663210/1‑100 (MQ=255) aTCCAGAGTTCGAAAATAGGATCAACACAAATAAAAGCCCCCGGAATGCTGCAACATGCC‑GGGGGCGGTATGAGAAACAAGCTAAAGGAGAATTTCTCAt < 2:1767470/100‑1 (MQ=255) gagTTCGAAAATAGGATCAACACAAATAAAAGCCCCGGGAATGCTGCAACATGCC‑GGGGGCGGTATGAGAAACAAGCTAAAGGAGAATTTCTCATGTCTg < 2:2026890/100‑1 (MQ=255) gagTTCGAAAATAGGATCAACACAAATAAAAGCCCCCGGAATGCTGCAACATGCC‑GGGGGCGGTATGAGAAACAAGCTAAAGGAGAATTTCTCATGTCTg < 1:1974944/100‑1 (MQ=255) agTTCGAAAATAGGATCAACACAAATAAAAGCCCCCGGAATGCTGCAACATGCC‑GGGGGCGGTATGAGAAACAAGCTAAAGGAGAATTTCTCATGTCTGa < 1:1043454/100‑1 (MQ=255) gTTCGAAAATAGGATCAACACAAATAAAAGCCCCCGGAATGCTGCAACATGCC‑GGGGGCGGTATGAGAAACAAGCTAAAGGAGAATTTCTCATGTCTGat > 2:317133/1‑100 (MQ=255) gTTCGAAAATAGGATCAACACAAATAAAAGCCCCCGGAATGCTGCAACATGCC‑GGGGGCGGTATGAGAAACAAGCTAAAGGAGAATTTCTCATGTCTGat < 2:353117/100‑1 (MQ=255) gTTCGAAAATAGGATCAACACAAATAAAAGCCCCCGGAATGCTGCAACATGCC‑GGGGGCGGTATGAGAAACAAGCTAAAGGAGAATTTCTCATGTCTGat < 2:101755/100‑1 (MQ=255) ttCGAAAATAGGATCAACACAAATAAAAGCCCCCGGAATGCTGCAAGATGCC‑GGGGGCGGTATGAGAAACAAGCTAAAGGAGAATTTCTCATGTCTGata > 2:1699925/1‑100 (MQ=255) ttCGAAAATAGGATCAACACAAATAAAAGCCCCCGGAATGCTGCAACATGCC‑GGGGGCGGTATGAGAAACAAGCTAAAGGAGAATTTCTCATGTCTGata > 2:3055871/1‑100 (MQ=255) ttCGAAAATAGGATCAACACAAATAAAAGCCCCCGGAATGCTGCAACATGCC‑GGGGGCGGTATGAGAAACAAGCTAAAGGAGAATTTCTCATGTCTGata > 1:2499233/1‑100 (MQ=255) tCGAAAATAGTATCAACACAAATAAAAGCCCCCGGAATGCTGCAACATGCC‑GGGGGCGGTATGAGATACGAGCTAAAGGAGAATTTCTCATGTCTGatat < 2:2000896/100‑1 (MQ=255) cGAGAATAGGATCAACACAAATAAAAGCCCCCGGAATGCTGCAACATGCC‑GGGGGCGGTATGAGAAACAAGCTAAAGGAGAATTTCTCATGTCTGata < 2:2576818/98‑1 (MQ=255) aaaaTAGGATCAACACAAATAAAAGCCCCCGGAATGCTGCAACATGCC‑GGGGGCGGTATGAGAAACAAGCTAAAGGAGAATTTCTCATGTCTGATATGCt > 2:226284/1‑100 (MQ=255) aaaaTAGGATCAACACAAATAAAAGCCCCCGGAATGCTGCAACATGCC‑GGGGGCGGTATGAGAAACAAGCTAAAGGAGAATTTCTCATGTCTGATATGCt < 1:1288760/100‑1 (MQ=255) aaaaTAGGATCAACACAAATAAAAGCCCCCGGAATGCTGCAACATGCC‑GGGGGCGGTATGAGAAACAAGCTAAAGGAGAATTTCTCATGTCTGATATGCt < 1:906351/100‑1 (MQ=255) aTAGGATCAACACAAATAAAAGCCCCCGGAATGCTGCAACATGCC‑GGGGGCGGTATGAGAAACAAGCTAAAGGAGAATTTCTCATGTCTGATATGCTAGc < 1:1588043/100‑1 (MQ=255) aTAGGATCAACACAAATAAAAGCCCCCGGAATGCTGCAACATGCC‑GGGGGCGGTATGAGAAACAAGCTAAAGGAGAATTTCTCATGTCTGATATGCTAGc < 2:814999/100‑1 (MQ=255) aGGATCAACACAAATAAAAGCCCCCGGAATGCTGCAACATGCC‑GGGGGCGGTATGAGAAACAAGCTAAAGGAGAATTTCTCATGTCTGATATGCTAGCAg < 1:2653873/100‑1 (MQ=255) ggATCAACACAAATAAAAGCCCCCGGAATGCTGCAACATGCC‑GGGGGCGGTATGAGAAACAAGCTAAAGGAGAATTTCTCATGTCTGATATGCTAGCAGt > 1:1389421/1‑100 (MQ=255) gATCAACACAAATAAAAGCCCCCGGAATGCTGCAACATGCC‑GGGGGCGGTATGAGAAACAAGCTAAAGGAGAATTTCTCATGTCTGATATGCTAGCAGTa < 1:2317591/100‑1 (MQ=255) cAACACAAATAAAAGCCCCCGGAATGCTGCAACATGCC‑GGGGGCGGTATGAGAAACAAGCTAAAGGAGAATTTCTCATGTCTGATATGCTAGCAGTAGaa > 1:2097124/1‑100 (MQ=255) cAACACAAATAAAAGCCCCCGGAATGCTGCAACATGCC‑GGGGGCGGTATGAGAAACAAGCTAAAGGAGAATTTCTCATGTCTGATATGCTAGCAGTAGaa < 2:799325/100‑1 (MQ=255) cAACACAAATAAAAGCCCCCGGAATGCTGCAACATGCC‑GGGGGCGGTATGAGAAACAAGCTAAAGGAGAATTTCTCATGTCTGATATGCTAGCAGTAGaa > 1:2128862/1‑100 (MQ=255) aaCACAAATAAAAGCCCCCGGAATGCTGCAACATGCC‑GGGGGCGGTATGAGAAACAAGCTAAAGGAGAATTTCTCATGTCTGATATGCTAGCAGTAGAAc > 1:1331704/1‑100 (MQ=255) aaCACAAATAAAAGCCCCCGGAATGCTGCAACATGCC‑GGGGGCGGTATGAGAAACAAGCTAAAGGAGAATTTCTCATGTCTGATATGCTAGCAGTAGAAc > 2:2717019/1‑100 (MQ=255) aaCACAAATAAAAGCCCCCGGAATGCTGCAACATGCC‑GGGGGCGGTATGAGAAACAAGCTAAAGGAGAATTTCTCATGTCTGATATGCTAGCAGTAGAAc > 1:2218512/1‑100 (MQ=255) aaCACAAATAAAAGCCCCCGGAATGCTGCAACATGCC‑GGGGGCGGTATGAGAAACAAGCTAAAGGAGAATTTCTCATGTCTGATATGCTAGCAGTAGAAc > 1:3052624/1‑100 (MQ=255) acacAAATAAAAGCCCCCGGAATGCTGCAACATGCC‑GGGGGCGGTATGAGAAACAAGCTAAAGGAGAATTTCTCATGTCTGATATGCTAGCAGTAGAACa < 1:1590696/100‑1 (MQ=255) acacAAATAAAAGCCCCCGGAATGCTGCAACATGCC‑GGGGGCGGTATGAGAAACAAGCTAAAGGAGAATTTCTCATGTCTGATATGCTAGCAGTAGAACa < 1:2408899/100‑1 (MQ=255) ttctcataccgCCCCCGGCATGTTGCAGCATTCC‑GGGGGCGGTATGAGAAACAAGCTAAAGGAGAATTTCTCATGTCTGATATGCTAGCAGTAGAACAAg > 1:72300/11‑100 (MQ=21) caAATAAAAGCCCCCGGAATGCTGCAACATGCC‑GGGGGCGGTATGAGAAACAAGCTAAAGGAGAATTTCTCATGTCTGATATGCTAGCAGTAGAACAAGa < 1:780564/100‑1 (MQ=255) aaaTAAAAG‑CCCCGGAATGCTGCAACATGCCGGGGGGCGGTATGAGAAACAAGCTAAAGGATAATTTCTCATGTCTGATATGCTAGCAGTAGAACAAGaa < 1:2151522/100‑1 (MQ=255) aTAAAAGCCCCCGGAATGCTGCAACATGCC‑GGGGGCGGTATGAGAAACAAGCTAAAGGAGAATTTCTCATGTCTGATATGCTAGCAGTAGAACAAGaaac < 1:2820358/100‑1 (MQ=255) ataccgCCCCCGGCATGTTGCAGCATTCC‑GGGGGCGGTATGAGAAACAAGCTAAAGGAGAATTTCTCATGTCTGATATGCTAGCAGTAGAACCAGaaaca > 1:1804325/6‑100 (MQ=25) aaaaGCCCCCGGAATGCTGCAACATGCC‑GGGGGCGGTATGAGAAACAAGCTAAAGGAGAATTTCTCATGTCTGATATGCTAGCAGTAGAACAAGaaacaa < 1:2717056/100‑1 (MQ=255) ccgCCCCCGGCATGTTGCAGCATTCC‑GGGGGCGGTATGAGAAACAAGCTAAAGGAGAATTTCTCATGTCTGATATGCTAGCAGTAGAACAAGaaacaaac > 2:65720/3‑100 (MQ=37) ccgCCCCCGGCATGTTGCAGCATTCC‑GGGGGCGGTATGAGAAACAAGCTAAAGGAGAATTTCTCATGTCTGATATGCTAGCAGTAGAACAAGaaacaaac > 2:2754615/3‑100 (MQ=37) cgCCCCCGGCATGTTGCAGCATTCC‑GGGGGCGGTATGAGAAACAAGCTAAAGGAGAATTTCTCATGTCTGATATGCTAGCAGTAGAACAAGAaacaaaca > 1:2414832/2‑100 (MQ=38) cgCCCCCGGCATGTTGCAGCATGCC‑GGGGGCGGTATGAGAAACAAGCGAAAGGAGAATTTATCATGTCTGATATGATAGCAGTAGAACAAGaaacaaaaa > 2:2132015/2‑98 (MQ=37) aGCCCCCGGAATGCTGCAACATGCC‑GGGGGCGGTATGAGAAACAAGCTAAAGGAGAATTTCTCATGTCTGATATGCTAGCAGTAGAACAAGAaacaaaca < 2:2897668/100‑1 (MQ=255) aGCCCCCGGAATGCTGCAACATGCC‑GGGGGCGGTATGAGAAACAAGCTAAAGGAGAATTTCTCATGTCTGATATGCTAGCAGTAGAACAAGAaacaaaca > 2:2218282/1‑100 (MQ=255) gCCCCCGGCATGTTGCAGCATTCC‑GGGGGCGGTATGAGAAACAAGCTAAAGGAGAATTTCTCATGTCTGATATGCTAGCAGTAGAACAAGAAacaaacaa > 1:1189134/1‑100 (MQ=38) gCCCCCGGCATGTTGCAGCATTCC‑GGGGGCGGTATGAGAAACAAGCTAAAGGAGAATTTCTCATGTCTGATATGCTAGCAGTAGAACAAGAAacaaacaa > 1:1085659/1‑100 (MQ=38) cccccGGCATGTTGCAGCATTCC‑GGGGGCGGTATGAGAAACAAGCTAAAGGAGAATTTCTCATGTCTGATATGCTAGCAGTAGAACAAGAAACAAACAat > 2:2842370/1‑100 (MQ=38) cccccGGCATGTTGCAGCATTCC‑GGGGGCGGTATGAGAAACAAGCTAAAGGAGAATTTCTCATGTATGATATGCTAGCAGTAGAACAAGAAacaaacaa > 1:2280778/1‑99 (MQ=38) cccccGGCATGTTGCAGCATTCC‑GGGGGCGGTATGAGAAACAAGCTAAAGGAGAATTTCTCAGGTCTGGTATGCTAGGAGTAGAACAAGAAACAAACAat > 2:2053283/1‑100 (MQ=37) cGGAATGCTGCAACATGCC‑GGGGGCGGTATGAGATACAAGCTAAAGGAGAATTTCTCATGTCTGATATGCTAGCAGTAGAACAAGAAACAAACAatgatg < 2:1614269/100‑1 (MQ=255) aTGCTGCAACATGCC‑GGGGGCGGTATGAGAAACAAGCTAAAGGAGAATTTCTCATGTCTGATATGCTAGCAGTAGAACAAGAAACAAACAATGATGTTCg < 1:2037685/100‑1 (MQ=255) ctgcAACATGCC‑GGGGGCGGTATGAGAAACAAGCTCAAGGAGAATTTCTCATGTCTGATATGCTAGCAGAAGAACAAGAAACAAACAATGATGTTCGTCa > 2:890406/1‑100 (MQ=255) ctgcAACATGCC‑GGGGGCGGTATGAGAAACAAGCTAAAGGAGAATTTCTCATGTCTGATATGCTAGCAGTAGAACAAGAAACAAACAATGATGTTCGTCa > 1:544327/1‑100 (MQ=255) tgcAACATGCC‑GGGGGCGGTATGAGAAACAAGCTAAAGGAGAATTTCTCATGTCTGATATGCTAGCAGTAGAACAAGAAACAAACAATGATGTTCGTCaa > 1:1879806/1‑100 (MQ=255) tgcAACATGCC‑GGGGGCGGTATGAGAAACAAGCTAAAGGAGAATTTCTCATGTCTGATATGCTAGCAGTAGAACAAGAAACAAACAATGATGTTCGTCaa < 2:2442992/100‑1 (MQ=255) aCATGCC‑GGGGGCGGTATGAGAAACAAGCTAAAGGAGAATTTCTCATGTCTGATATGCTAGCAGTAGAACAAGAAACAAACAATGATGTTCGTCAAtttt > 2:2390593/1‑100 (MQ=255) aCATGCC‑GGGGGCGGTATGAGAAACAAGCTAAAGGAGAATTTCTCATGTCTGATATGCTAGCAGTAGAACAAGAAACAAACAATGATGTTCGTCAAtttt > 2:2176977/1‑100 (MQ=255) aCATGCC‑GGGGGCGGTATGAGAAACAAGCTAAAGGAGAATTTCTCATGTCTGATATGCTAGCAGTAGAACAAGAAACAAACAATGATGTTCGTCAAtt > 2:2161170/1‑98 (MQ=255) | AAATTATTCAATATCAAGAACTTAAATCCATGTTTGCAACGAAAGATCCAGAGTTCGAAAATAGGATCAACACAAATAAAAGCCCCCGGAATGCTGCAACATGCC‑GGGGGCGGTATGAGAAACAAGCTAAAGGAGAATTTCTCATGTCTGATATGCTAGCAGTAGAACAAGAAACAAACAATGATGTTCGTCAATTTT > NC_000913/2560228‑2560425 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |