BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,856,887	C→T	intergenic (‑81/‑206)	ygbA ← / → mutS	uncharacterized protein/methyl‑directed mismatch repair protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,856,887	0	C	T	100.0%	409.9 / NA	119	intergenic (‑81/‑206)	ygbA/mutS	uncharacterized protein/methyl‑directed mismatch repair protein
Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (70/49); total (70/49)

Only 100 of 119 total aligned reads displayed.

CGCTTGCCGGACATGCTGCCTCCACCTCATTAAGATGTATT‑TATATTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGCCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGCAAAAGCTGCAAAACAGCATCTTTCCCGGAACCAGCATCAAGAACTCGCCGTT  >  NC_000913/2856793‑2856981

cGCTTGCCGGACATGCTGCCTCCACCTCATTAAGATGTATT‑TATATTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGTCAAcc                                                                                           >  1:1241939/1‑100 (MQ=255)

 gCTTGCCGGACATGCTTCCTCCACCTCATTAAGATGTATT‑TATATTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGTCAACCg                                                                                          <  1:250502/100‑1 (MQ=255)

   ttGCCGGACATGCTGCCTCCACCTCATTAAGATGTATT‑TATATTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGTCAACCGAt                                                                                        <  2:2459693/100‑1 (MQ=255)

          aCATGCTGCCTCCACCTCATTAAGATGTATT‑TATATTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGTCAACCGATACAAttt                                                                                 >  2:2644046/1‑100 (MQ=255)

            aTGCTGCCTCCACCTCATTAAGATGTATT‑TATATTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTg                                                                               <  2:62951/100‑1 (MQ=255)

            aTGCTGCCTCCACCGCATTAAGATGTATT‑TATATTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTg                                                                               <  2:2079491/100‑1 (MQ=255)

             tgctgcCTCCACCTCATTAAGATGTATT‑TATATTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGc                                                                              >  1:210864/1‑100 (MQ=255)

             tgctgcCTCCACCTCATTAAGATGTATT‑TATATTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGc                                                                              >  1:468697/1‑100 (MQ=255)

              gctgcCTCCACCTCATTAAGATGTATT‑TATATTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCg                                                                             >  2:941161/1‑100 (MQ=255)

              gctgcCTCCACCTCATTAAGATGTATT‑TATATTACAACTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCg                                                                             <  1:2140207/100‑1 (MQ=255)

                 ggcTCCACCTCATTAAGATGTATT‑TATATTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCGTAc                                                                          >  1:2831770/3‑100 (MQ=255)

                  ccTCCACCTCATTAAGATGTATT‑TATATTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCGTACt                                                                         >  1:1746985/1‑100 (MQ=255)

                   cTCCACCTCATTAAGATGTATT‑TATATTACATCTTAATCTTAAAGGGCCCTATGACTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCGTACt                                                                         <  2:1483160/99‑1 (MQ=255)

                   cTCCACCTCATTAAGATGTATT‑TATATTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCGTACtt                                                                        >  1:1057639/1‑100 (MQ=255)

                   cTCCACCTCATTAAGATGTATT‑TATATTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCGTACtt                                                                        >  1:220125/1‑100 (MQ=255)

                    cctttaagaTTAAGATGTAAT‑ATAAATACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCGTACTTg                                                                       >  2:2507732/9‑100 (MQ=25)

                     ctttaagaTTAAGATGTAATATAAA‑TACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCGTACTTGc                                                                      >  2:840471/8‑100 (MQ=21)

                      catcTCATTAAGATGTATT‑TATATTACATCTTAATCTTAAAGGTCATTATGACTCCAAAGATGAAGGTTTAGTCAACCGATACAATTTTCCGTACt                                                                         >  2:543470/4‑96 (MQ=255)

                      cACCTCATTAAGATGTATT‑TATATTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCGTACTTGCt                                                                     <  2:2701925/100‑1 (MQ=255)

                      cACCTCATTAAGATGTATT‑TATATTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCGTACTTGCt                                                                     <  2:2775808/100‑1 (MQ=255)

                      cACCTCATTAAGATGTATT‑TATATTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCGTACTTGCt                                                                     <  1:1918755/100‑1 (MQ=255)

                      cACCTCATTAAGATGTATT‑TATATTACATCTTAATCCTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCGTACTTGCt                                                                     >  2:956228/1‑100 (MQ=255)

                       aCCTCATTAAGATGTATT‑TATATTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCGTACTTGCtt                                                                    >  2:2230027/1‑100 (MQ=255)

                          tCATTAAGATGTATT‑TATATTACATCTTAATCTTAAAGGGCACTATGAGTATAAAGAAAAAGGGTTAGTAAACCGATATAATTTTACGTACTTGGTTGAt                                                                 >  2:1505486/1‑100 (MQ=255)

                          tCATTAAGATGTATT‑TATATTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCGTACTTGCTTCAt                                                                 <  2:2831731/100‑1 (MQ=255)

                            aTTAAGATGTATT‑TATATTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGTCAACCGATACAAGGTTGCGTACTTGCTTCATaa                                                               <  2:622678/100‑1 (MQ=255)

                             ttAAGATGTATT‑TATATTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCGTACTTGCTTCATAAg                                                              <  2:2718974/100‑1 (MQ=255)

                             ttAAGATGTATT‑TATATTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCGTACTTGCTTCATAAg                                                              >  1:30358/1‑100 (MQ=255)

                             ttAAGATGTATT‑TATATTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCGTACTTGCTTCATAAg                                                              <  1:1629175/100‑1 (MQ=255)

                              tAAGATGTATT‑TATATTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCGTACTTGCTTCATAAGc                                                             >  1:683977/1‑100 (MQ=255)

                              tAAGATGTATT‑TATATTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCGTACTTGCTTCATAAGc                                                             <  2:1543216/100‑1 (MQ=255)

                              tAAGATGTATT‑TATATTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCGTACTTGCTTCATAAGc                                                             <  2:2515395/100‑1 (MQ=255)

                               aaGATGTATT‑TATATTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCGTACTTGCTTCATAAGCa                                                            <  2:1285731/100‑1 (MQ=255)

                                aGATGTATT‑TATATTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCGTACTTGCTTCATAAGCAt                                                           >  1:1615940/1‑100 (MQ=255)

                                 gATGTATT‑TATATTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGTTAACCGATACAATTTTGCGTACTTGCTTCATAAGCATc                                                          <  2:2948919/100‑1 (MQ=255)

                                  aTGTATT‑TATATTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCa                                                         <  2:783928/100‑1 (MQ=255)

                                  aTGTATT‑TATATTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCa                                                         <  2:340139/100‑1 (MQ=255)

                                  aTGTATT‑TATATTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCa                                                         <  2:924003/100‑1 (MQ=255)

                                   tGTATT‑TATATTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCAc                                                        <  1:634128/100‑1 (MQ=255)

                                    gTATT‑TATATTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACg                                                       <  2:2372918/100‑1 (MQ=255)

                                     tATT‑TATATTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGc                                                      >  2:1377405/1‑100 (MQ=255)

                                     tATT‑TATATTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGc                                                      >  2:69356/1‑100 (MQ=255)

                                     atct‑tATATTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGc                                                      <  1:401808/97‑1 (MQ=255)

                                          tataTTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGCagat                                                  >  2:401801/1‑97 (MQ=255)

                                            tatTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGCAAAAGc                                                <  2:1057628/100‑1 (MQ=255)

                                             atTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGCAAAAGCt                                               >  1:2930693/1‑100 (MQ=255)

                                              ttACATCTTAATCTTAAAGGGCACTATTACTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGCAAAAGCTg                                              <  2:2908073/100‑1 (MQ=255)

                                              ttACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGCAAAAGCTg                                              <  1:598704/100‑1 (MQ=255)

                                              ttACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGCAAAAGCTg                                              >  1:2319617/1‑100 (MQ=255)

                                               tACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGCAAAAGCTGc                                             >  2:1316087/1‑100 (MQ=255)

                                                 cATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGCAAAAGCTGCaa                                           >  1:2992830/1‑100 (MQ=255)

                                                 cATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGCAAAAGCTGCaa                                           >  1:1105537/1‑100 (MQ=255)

                                                    cttaatcttaaAGGGCACTATGACTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGCAAAAGCTGCAAAAc                                        >  1:1657050/1‑100 (MQ=255)

                                                     ttaatcttaaAGGGCACTATGACTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGCAAAAGCTGCAAAACa                                       <  1:1711384/100‑1 (MQ=255)

                                                     ttaatcttaaAGGGCACTATGACTCCAAAGAAGAAGGGTTAGTCAACCGATACAAATTTGCGTACTTGCTTCATAAGCATCACGCAAAAGCTGCAAAACa                                       >  2:1475626/1‑100 (MQ=255)

                                                      taatcttaaAGGGCACTATGACTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGCAAAAGCTGCAAAACAg                                      <  1:501185/100‑1 (MQ=255)

                                                       aatcttaaAGGGCACTATGACTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGCAAAAGCTGCAAAACAGc                                     <  2:2287637/100‑1 (MQ=255)

                                                        atcttaaAGGGCACTATGACTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGCAAAAGCTGCAAAACAGCa                                    >  1:1808028/1‑100 (MQ=255)

                                                         tcttaaAGGGCACTATGACTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGCAAAAGCTGCAAAACAGCAt                                   >  2:1131838/1‑100 (MQ=255)

                                                          cttaaAGGGCACTATGACTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGCAAAATCTGCAAAACAGCATc                                  >  1:3005918/1‑100 (MQ=255)

                                                          cttaaAGGGCACTATGACTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGCAAAAGCTGCAAAACAGCATc                                  >  1:1511582/1‑100 (MQ=255)

                                                          cttaaAGGGCACTATGACTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGCAAAAGCTGCAAAACAGCATc                                  <  1:124185/100‑1 (MQ=255)

                                                          cttaaAGGGCACTATGACTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGCAAAAGCTGCAAAACAGCATc                                  >  2:592968/1‑100 (MQ=255)

                                                           ttaaAGGGCACTATGACTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGCAAAAGCTGCAAAACAGCATCt                                 >  1:2378473/1‑100 (MQ=255)

                                                           ttaaAGGGCACTATGACTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGCAAAAGCTGCAAAACAGCATCt                                 >  2:2168789/1‑100 (MQ=255)

                                                            taaAGGGCACTATGACTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGCAAAAGCTGCAAAACAGCATCtt                                >  1:918927/1‑100 (MQ=255)

                                                             aaaGGGCACTATGACTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGCAAAAGCTGCAAAACAGCATCttt                               >  2:448958/1‑100 (MQ=255)

                                                                gggCACTATGACTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGCAAAAGCTGCAAAACAGCATCTTTccc                            <  1:1078368/100‑1 (MQ=255)

                                                                gggCACTATGACTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGCAAAAGCTGCAAAACAGCATCTTTccc                            >  2:208874/1‑100 (MQ=255)

                                                                gggCACTATGACTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGCAAAAGCTGCAAAACAGCATCTTTccc                            <  1:1078381/100‑1 (MQ=255)

                                                                  gCACTATGACTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGCAAAAGCTGCAAAACAGCATCTTTCCCgg                          >  1:928094/1‑100 (MQ=255)

                                                                   cACTATGACTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGCAAAAGCTGCAAAACAGCATCTTTCCCGGa                         >  1:1345103/1‑100 (MQ=255)

                                                                     cTATGACTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGCAAAAGCTGCAAAACAGCATCTTTCCCGGAAc                       >  1:1570179/1‑100 (MQ=255)

                                                                     cTATGACTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGCAAAAGCTGCAAAACAGCATCTTTCCCGGAAc                       >  2:1474131/1‑100 (MQ=255)

                                                                      tATGACTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGCAAAAGCTGCAAAACAGCATCTTTCCCGGAAcc                      >  1:793851/1‑100 (MQ=255)

                                                                      tATGACTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGCAAAAGCTGCAAAACAGCATCTTTCCCGGAAcc                      >  1:727027/1‑100 (MQ=255)

                                                                         taCTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGCAAAAGCTGCAAAACAGCATCTTTCCCGGAACCAGc                   <  1:1267051/99‑1 (MQ=255)

                                                                          aCTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGCAAAAGCTGCAAAACAGCATCTTTCCCGGAACCAGCa                  <  1:2027230/100‑1 (MQ=255)

                                                                          aCTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGCAAAAGCTGCAAAACAGCATCTTTCCCGGAACCAGCa                  >  2:1267039/1‑100 (MQ=255)

                                                                           cTCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGCAAAAGCTGCAAAACAGCATCTTTCCCGGAACCAGCAt                 >  1:1246180/1‑100 (MQ=255)

                                                                            tCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGCAAAAGCTGCAAAACAGCATCTTTCCCGGAACCAGCATc                >  1:1001190/1‑100 (MQ=255)

                                                                            tCCAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGCAAAAGCTGCAAAACAGCATCTTTCCCGGAACCAGCATc                >  2:2870667/1‑100 (MQ=255)

                                                                             ccAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGCAAAAGCTGCAAAACAGCATCTTTCCCGGAACCAGCATCa               >  1:380414/1‑100 (MQ=255)

                                                                              cAAAGAAGAAGGGTTAGTCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGCAAAAGCTGCAAAACAGCATCTTTCCCGGAACCAGCATCaa              >  2:2784754/1‑100 (MQ=255)

                                                                                aagaagaagGGTTAGTCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGCAAAAGCTGCAAAACAGCATCTTTCCCGGAACCAGCATCAAGa            <  1:941171/100‑1 (MQ=255)

                                                                                  gaagaagTGTTAGTCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGCAAAAGCTGCAAAACAGCATCTTTCCCGGAACCAGCATCAAGAAc          <  2:210857/100‑1 (MQ=255)

                                                                                  gaagaagGGTTAGTCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGCAAAAGCTGCAAAACAGCATCTTTCCCGGAACCAGCATCAAGAAc          <  2:683969/100‑1 (MQ=255)

                                                                                  cgatctgggTTAGTCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGCAAAAGCTGCAAAACAGCATCTTTCCCGGAACCAGCATCAAGAAc          <  2:2654804/94‑1 (MQ=255)

                                                                                   aagaagGGTTAGTCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGCAAAAGCTGCAAAACAGCATCTTTCCCGGAACCAGCATCAAGAACt         <  2:463576/100‑1 (MQ=255)

                                                                                    agaagGGTTAGTCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGCAAAAGCTGCAAAACAGCATCTTTCCCGGAACCAGCATCAAGAACTc        >  1:73298/1‑100 (MQ=255)

                                                                                    agaagGGTTAGTCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGCAAAAGCTGCAAAACAGCATCTTTCCCGGAACCAGCATCAAGAACTc        >  1:2105146/1‑100 (MQ=255)

                                                                                      aagGGTTAGTCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGCAAAAGCTGCAAAACAGCATCTTTCCCGGAACCAGCATCAAGAACTCGc      <  1:2784793/100‑1 (MQ=255)

                                                                                      aagGGTTAGTCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGCAAAAGCTGCAAAACAGCATCTTTCCCGGAACCAGCATCAAGAACTCGc      <  1:2329359/100‑1 (MQ=255)

                                                                                       agGGTTAGTCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGCAAAAGCTGCAAAACAGCATCTTTCCCGGAACCAGCATCAAGAACTCGcc     >  1:1085292/1‑100 (MQ=255)

                                                                                        gggTTAGTCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGCAAAAGCTGCAAAACAGCATCTTTCCCGGAACCAGCATCAAGAAcagatcg    >  1:2654841/1‑94 (MQ=255)

                                                                                        gggTTAGTCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGCAAAAGCTGCAAAACAGCATCTTTCCCGGAACCAGCATCAAGAACTCGCCg    >  1:460522/1‑100 (MQ=255)

                                                                                         ggTTAGTCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGCAAAAGCTGCAAAACAGCATCTTTCCCGGAACCAGCATCAAGAACTCGCCGt   <  2:1295410/100‑1 (MQ=255)

                                                                                         ggTTAGTCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGCAAAAGCTGCAAAACAGCATCTTTCCCGGAACCAGCATCAAGAACTCGCCGt   >  1:1566647/1‑100 (MQ=255)

                                                                                         ggTTAGTCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGCAAAAGCTGCAAAACAGCATCTTTCCCGGAACCAGCATCAAGAACTCGCCGt   <  2:2667544/100‑1 (MQ=255)

                                                                                          gTTAGTCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGCAAAAGCTGCAAAACAGCATCTTTCCCGGAACCAGCATCAAGAACTCGCCGtt  >  1:2185292/1‑100 (MQ=255)

CGCTTGCCGGACATGCTGCCTCCACCTCATTAAGATGTATT‑TATATTACATCTTAATCTTAAAGGGCACTATGACTCCAAAGAAGAAGGGTTAGCCAACCGATACAATTTTGCGTACTTGCTTCATAAGCATCACGCAAAAGCTGCAAAACAGCATCTTTCCCGGAACCAGCATCAAGAACTCGCCGTT  >  NC_000913/2856793‑2856981

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`