| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 3,912,832 | 6827 bp→TGTAGGCTGGAGCTGCTTCGAAGTTCCTATACTTTCTAGAGAATAGGAACTTCGAACTGCAGGTCGACGGATCCCCGGAAT | [atpC]–[atpI] | [atpC], atpD, atpG, atpA, atpH, atpF, atpE, atpB, [atpI] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 3912832 | 3919658 | 6827 | 70 [0] | [0] 63 | [atpC]–[atpI] | [atpC], atpD, atpG, atpA, atpH, atpF, atpE, atpB, [atpI] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3912831 | 0 (0.000) | 48 (0.860) +TGTAGGCTGGAGCTGCTTCGAAGTTCCTATACTTTCTAGAGAATAGGAACTTCGAACTGCAGGTCGACGGATCCCCGGAAT |
35/376 | 0.5 | 100% | coding (390/420 nt) | atpC | F1 sector of membrane‑bound ATP synthase, epsilon subunit |
| ? | NC_000913 | 3919659 = | 0 (0.000) | coding (30/381 nt) | atpI | ATP synthase, membrane‑bound accessory factor | |||||
AACCCACGTAACGATCAGCGGCAAGAATACCGCCTTTAAAACCGCCAACGCCACCACCAGTAACACCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACGCCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAGAGACGCCCCAGAAGGGGTCTTTGAGGCTGAACAGCAATCCACTTGCTATCACCACCAGTAACTGAACGAGCAGAAGCTTCCGAGCAACGTTTCGACTCACGAGCGACACA‑GACATCACGTTTTTCACTCCTGCTCCCTTCGAGGTATGCCGCGTGTCGTATAAAACTTTCTTTAAGGCTTAGAGTCAAGCATCAAAAAGCGGTCAAATTATACGGTGCGCCCCCGTGATTTCAAACAATAAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATAT > NC_000913/3919362‑3919951 | taaggcagtaccttaatttaagcgtcaggtggatgtttttgctcttatttcgatcaataaataaacaggaaaacaggggggttttatatcagcaggatctatgtaaacgctattcgggacaagtcacacgcgcaaaaaaaagccagcctgtttccagactggcttttgtgcttttcaggccggtgttacatcgcttttttggtcaactcgataacgtgtaggctggagctgcttcgaagttcctatactttctagagaataggaacttcgaactgcaggtagacggatccccggaataa < 1:448746‑M2/2‑1 (MQ=255) gcagtaccttaatttaagcgtcaggtggatgtttttgctcttatttcgatcaatgaataaacaggaaaacaggggggttttatatcagcaggatctatgtgaacgctattcaggacgggtcacacgcgcaaaaaaaagccagcctgtttccagactggcttttgtgcttttcaagccggtgttacatcgcttttttggtcaactcgataacgtgtaggctggagctgcttcgcagttcctatactttctagagaataggaacttcgaactgcaggtcgacggatccccggaatAACGtt > 1:107599‑M2/294‑299 (MQ=255) ataagagacagggatgtttttgctcttatttcgatcaatgaataaacaggaaaacaggggggttttatatcagcaggatctatgtgaacgctattcaggacgggtcacacgcgcaaaaaaaagccagcctgtttccagactggcttttgtgcttttcaagccggtgttacatcgcttttttggtcaactcgataacgtgtaggctggagctgcttcgaagttcctatactttctagagaataggaacttcgaactgcaggtcgacggatccccggaatAAc < 1:589163‑M2/3‑1 (MQ=255) ggtggatgtttttgctcttatttcgatcaatgaataaacaggaaaacaggggggttttatatcagcaggatctatgtgaacgctattcaggacgggtcacacgcgcaaaaaaaagccagcctgtttccagactggcttttgtgcttttcaagccggtgttacatcgcttttttggtcaactcgataacgtgtaggctggagctgcttcgaagttcctatactttctagagaataggaaattcgaactgaaggtcgacggatccccggaatAACGTTTCGACTCCCGAGCGAAACA‑g > 2:285212‑M2/271‑296 (MQ=255) gtggatgtttttgctcttatttcgatcaatgaataaacaggaaaacaggggggttttatatcagcaggatctatgtgaacgcttttcaggacgggtcacacgcgcaaaaaaaagccagcctgtttccagactggcttttgtgcttttcaagccggtgttacatcgcttttttggtcaactcgataacgtgtaggctggagctgcttcgaagttcctatactttctagagaataggaacttcgaactgcaggtcgacggatccccggaatAACGTTTCGACTCACGAGCGACACA‑GACATCa > 1:428300‑M2/270‑301 (MQ=255) ggatgtttttgctcttatttcgatcaatgaataaacaggaaaacaggggggttttatatcagcaggatctatgtgaacgctattcaggacgggtcacacgcgcaaaaaaaagccagcctgtttccagactggcttttgtgcttttcaagccggggttacatcgcttttttggtcaactcgataacgtgtaggctggagctgcttcgaagttcctatactttctagagaataggaacttcgaactgcaggtcaacgcatccccggaataacctgtctcttatacaactctcctagcccacg > 2:589177‑M2/268‑270 (MQ=255) gtttttgctcttatttcgatcaatgaataaacaggaaaacaggggggttttatatcagcaggatctatgtgaacgctattcaggacgggtcacacgcgcaaaaaaaagccagcctgtttccagactggcttttgtgcttttcaagccggtgttacatcgcttttttggtcaactcgataacgtttaggctggagctgcttcgaagttcctatactttctagagaataggaacttcgaactgcaggtcgacggatccccggaatAACGTTTCGACTCACGAGCGACACA‑GACATCCCGtttt > 1:385712‑M2/264‑301 (MQ=255) ttgctctgatttcgatcaatgaataaacaggaagacaggggggttttatatcagaaggatctatgtgaacgctattcaggacgggtcacacgcgcaaaaaaaagccagcctgtttccagactggcttttgtgcttttcaagccggttgtacatcgcttttttggtcaactcgataacgtgtaggctggagctgcttcgaagttcctatactttctagagaataggaacttcgaactgcaggtcgacggatccccggaatAACGTTTCGACTCACGAGCGACACA‑GACATCACGTTTTTCAc < 1:366512‑M2/42‑1 (MQ=255) ataaacaggaaaacaggggggttttatatcagcaggatctatgtgaacgctattcaggacgggtcacacgcgcaaaaaaaagccagcctgtttccagactggcttttgtgcttttcaagccggtgttacatcgcttttttggtcaactcgataacttgtaggctggagctgcttcgaagttcctatactttctagagaataggaacttcgaactgcaggtcgacggatccccggaatCACGTTTTCACTCAAGAACGA‑ACACGACATCACGTTTTTCTCTCCTGCTcccttcctggt > 1:489499‑M2/238‑292 (MQ=255) gggttttatatcagcaggatctatgtgaacgctaagcaggacgggtcacacgcgcaaaaaaaagccagcctgtttccagactggcttttgtgcttttcaagccggtgttacatcgcttttttggtcaactcgataacgtgtaggctggagctgcttcgaagttcctatactttctagagaataggaacttcgaactgcaggtcgacggatccccggaatAACGTTTCGACTCACGAGCGACACA‑GACATCACGTTTTTCACTCCTGCTCCCTTCGAGGTATGCCGCGTGTCGTATAAAAc < 2:107608‑M2/81‑1 (MQ=255) ggatctatgtgaacgctattcaggacgggtcacacgcgcaaaaaaaagccagcctgtttccagactggcttttgtgcttttcaagccggtgttacatcgcttttttggtcaactcgataacgtgtaggctggagctgcttcgaagttcctatactttctagagaataggaacttcgaactgcaggtcgacggatccccggaatAACGTTTCGACTCACGAGCGACACA‑GACTTCACGTCTTTCAATCCTGCTCCCTTCGAGGTATGCCGCGTTGCgtataaaactttcttttatgatta > 1:619477‑M2/204‑291 (MQ=255) ggatctatgtgaacgctattcaggacgggtcacacgcgcaaaaaaaagccagcctgtttccagactggcttttgtgcttttcaagccggtgttacatcgcttttttggtcaactcgataacgtgtaggctggagctgcttcgaagttcctatactttctagagaataggaacttcgaactgcaggtcgacggatccccggaatAACGTTTCGACTCACGAGCAACACA‑GACATCACGTTTTTCACTCCTGCTCCCTTCGAGGTATGCCGCGTGTCGTATAAAACTTTCTTTAAGGCTTag > 2:104167‑M2/204‑300 (MQ=255) gatctatgtgaacgctattcaggacgggtcacacgcgcaaaaaaaagccagcctgtttccagactggcttttgtgcttttcaagccggtgttacatcgcttttttggtcaactcgataacgtgtaggctggagctgcttcgaagttcctatactttctagagaataggaacttcgaactgcaggtcgacggatccccggaatAACGTTTCGACTCACGAGCGACACA‑GACATCACGTTTTTCACTCCTGCTCCCTTCGAGGTATGc < 2:497561‑M2/64‑1 (MQ=255) atctatgtgaacgctattcaggacgggtcacacgcgcaaaaaaaagccagcctgtttccagactggcttttgtgcttttcaagccggtgttacatcgcttttttggtcaactcgataacgtgtaggctggagctgcttcgaagttcctatactttctagagaataggaacttcgaactgcaggtcgacggatccccggaatAACGTTTCGACTCACGAGCGACACA‑GACATCACGTTTTTCACTCCTGCTCCCTTCGAGGTATGCCGCGTGTCGTATAAAACTTTCTTTAAGGCTTagag < 2:481627‑M2/99‑1 (MQ=255) tctatgtgaacgctattcaggacgggtcacacgcgcaaaaaaaagccagcctgtttccagactggcttttgtgcttttcaagccggtgttacatcgcttttttggtcaactcgataacgtgtaggctggagctgcttcgaagttcctatactttctagagaataggaacttcgaactgcaggtcgacggatccccggaatAACGTTTCGACTCACGAGCGACACA‑GACATCACGTTTTTCACTCCTGCTCCCTTCGAGGTATGCCGCGTGTCGTATAAAACTTTCTTTAAGGCTTagag < 1:177646‑M2/99‑1 (MQ=255) tctagtttaacgctattcaggacgggtcacacgcgcaaaaaaaagccagcctttttccagactggcttttgtgcttttcaagccggtgttacatcgcttttttggtcaactcgataacgtgtaggctggagctgcttcgaagttcctatactttctagagaataggaacttcgaactgcaggtcgacggatccccggaatAACGTTTCGACTCACGAGCGACACA‑GACATCACGTTTTTCACTCCTGCTCCCTTCGAGGTATGCCGCGTGTCGTATAAAACTTTCTTTAAGGCTTAGAGt < 1:203651‑M2/100‑1 (MQ=255) ctatgtgaacgctattcaggacgggtcacacgcgcaaaaaaaagccagcctgtttccagactggcttttgtgcttttcaagccggtgttacatcgcttttttggtcaactcgataacgtgtaggctggagctgcttcgaagttcctatactttctagagaataggaacttcgaactgcaggtcgacggatccccggaatAACGTTTCGACTCACGAGCGACACA‑GACATCACGTTTTTCACTCCTGCTCCCTTCGAGGTATGCCGCGTGTCGTATAAAACTTTCTTTAAGGCTTAGAGt < 2:385724‑M2/100‑1 (MQ=255) taaaagagacagattcaggacgtgtcacactcgcaaaaaaaagccagccggtgtccagactggcttttgttcttttcaagccggtgttacatcgcttttttggtcaactcgataacgggtaggctggagctgcttcgaagttcctatactttctagagaataggaacttcgaactgcaggtcgacggatccccggaatAACGTTTCGACTCACGAGCGACACA‑GACATCACGTTTTTCACTCCTGCTCCCTTCGAGGTATGCCGCGTGTCGTATAAAACTTTCTTTAAGGc < 1:655408‑M2/93‑1 (MQ=255) atgtgaacgctattcaggacgggtcacacgcgcaaaaaaaagccagcctgtttccagactggcttttgtgcttttcaagccggtgttacatcgcttttttggtcaactcgataacgtgtaggctggagctgcttcgaagttcctatactttctagagaataggaacttcgaactgcaggtcgacggatccccggaatAACGTTTCGACTCACGAGCGACACA‑GACATCACGTTTTTCACTCCTGCTCCCTTCGAGGTATGCCGCGTGTCGTATAAAACTTTCTTTAAGGCTTAGAGTCaa > 2:649264‑M2/198‑300 (MQ=255) atgtgaaagctattcaggacgggtcacacgcgcaaaaaaaagccagcctgtttccagactggcttttgtgcttttcaagccggtgttacatcgcttttttggtcaactcgataacgtgtaggctggagctgcttcgaagttcctatactttctagagaataggaacttcgaactgcaggtcgacggatccccggaatAACGTTTCGACTCACGAGCGACACA‑GACATCACGTTTTTCACTCCTGCTCCCTTCGAGGTATGCCGCGTGTCGTATAAAACTTTCTTTAAGGCTTagag < 2:375520‑M2/99‑1 (MQ=255) gaacgctattcaggacgggtcacacgcgcaaaaaaaagccagcctgtttccagactggcttttgtgcttttcaagccggtgttacatcgcttttttggtcaactcgataacgtgtaggctggagctgcttcgaagttcctatactttctagagaataggaacttcgaactgcaggtcgacggatccccggaatAACGTTTCGACTCACGAGCGACACA‑GACATCACGTTTTTCACTCCTGCTCCCTTCGAGGTATGCCGCGTGTCGTATAAAACTTTCTTTAAGGCTTAGAGTCAAGc < 2:619491‑M2/105‑1 (MQ=255) ctattcaggacgggtcacacgcgcaaaaaaaagccagcctgtttccagactggcttttgtgcttttcaagccggtgttacatcgcttttttggtcaactcgataacgtgtaggctggagctgcttcgaagttcctatactttctagagaataggaacttcgaactgcaggtcgacggatccccggaatAACGTTTCGACTCACGAGCGACACA‑GACATCACGTTTTTCACTCCTGCTCCCTTCGAGGTATGCCGCGTGTCGTATAAAACTTTCTTTAAGGCTTAGAGTCAAGCATCaaaaa > 2:126680‑M2/189‑301 (MQ=255) tattcaggacgggtcacacgccaaaaaaaaagccagcctggttccagactggcttgtgtgcttttcaagccggtgttacatcgcttttttggtcaactcgataacgtgtaggctggagctgcttcgaagttcctatactttctagagaataggaacttcgaactgcaggtcgacggatccccggaatAACGTTTCGACTCACGAGCGACACA‑GACATCACGTTTTTCACTCCTGCTCCCTTCGATGTATGCCGCGTGTCGTATAAAACTTTCTTTAAGGCTTAGAGTCAAGCATCAAAAAg < 2:380129‑M2/114‑1 (MQ=255) attcaggacgggtcacacgcgcaaaaaaaagccagcctgtttccagactggcttttgttcttttcaagccggtgttacatcgcttttttggtcaactcgataacgtgtaggctggatctgcttcgaagttcctatactttctagagaataggaacttcgaactgcaggtcgacggatccccggaatAACGTTTCTACTCACGAGCGACACA‑GACATCACGTTTTTCACTCTTGCTCCCTTCCAGGTATGCCGCGGGCCGTATAAAACTTTCTTTAAGGCTTAGAGGCAAGCATCaaaaa > 2:56984‑M2/187‑299 (MQ=255) attcaggacgggtcacacgcgcaaaaaaaagccagcctgtttccagactggcttttgtgcttttcaagccggtgttacatcgcttttttggtcaactcgataacgtgtaggctggagctgcttcgaagttcctatactttctagagaataggaacttcgaactgcaggtcgacggatccccggaatAACGTTTCGACTCACGAGCGACACA‑GACATCACGTTTTTCACTCCTGCTCCCTTCGAGGTATGCCGCGTGTCGTATAAAACTTTCTTTAAGGCTTAGAGTCAAGCATCacaaa > 1:7223‑M2/187‑299 (MQ=255) attcaggacgggtcacacgcgcaaaaaaaagccagcctgtttccagactggcttttgtgcttttcaagccggtgttacatcgcttttttggtcaactcgataacgtgtaggctggagctgcttcgaagttcctatactttctagagaataggaacttcgaactgcaggtcgacggatccccggaatAACGTTTCGACCCACGAGCGACCCA‑GACATCAAGTTTTTAACTCCTGCTCCCTTCGAGGTATGCCGCGCGTCGTCTAAAACTTTCTTTAAGGCTTAGCGTCAAGCATCAAAAAg > 1:341455‑M2/187‑300 (MQ=255) attcaggacgggtcacacgcgcaaaaaaaagccagcctgtttccagactggcttttgtgcttttcaagccggtgttacatcgcttttttggtcaactcgataacgtgtaggctggagctgcttcgaagttcctatactttctagagaataggaacctcgacctgcaggtcgacggatccccggaatAACGTTTCGACTTACGAGCGACACA‑GACATCACGTTTTTCACTCCTGTTCCCTTCGAGGTCTGCCGCGTGTCGTATACAACTTTCTTTa > 2:655426‑M2/187‑275 (MQ=255) cgggtcacacgcgcaaaaaaaagccagcctgtttccagactggcttttgtgcttttcaagccggtgttacatcgcttttttggtcaactcgataacgtgtaggctggagctgcttcgaagttcctatactttctagagaataggaacttcgaactgcaggtcgacggatccccggaatAACGTTTCGACTCACGAGCGACACA‑GACATCACGTTTTTCACTCCTGCTCCCTTCGAGGTATGCCGCGTGTCGTATAAAACTTTCTTTAAGGCTTAGAGTCAAGCATCAAAAAGCGGTCaaa < 2:605118‑M2/122‑1 (MQ=255) ggtcacacgcgcaaaaaaaagccagcctgtttccagactggcttttgtgcttttcaagccggtgttacatcgcttttttggtcaactcgataaggtgtaggctggagctgcttcgaagttcctatactttctagagaataggaacttcgaactgcaggtcgacggatccccggaatAACGTTTCGGCTCACGAGCGACACA‑GACATCACGTTTTTCACTCCTGCTCCCTTCGAGGt < 2:564605‑M2/60‑1 (MQ=255) ggtcacacgcgcaaaaaaaagccagcctgtttccagactggcttttgtgcttttcaagccggtgttacatcgcttttttggtcaactcgataacgtgtaggctggagctgcttcgaagttcctatactttctagagaataggaacttcgaactgcaggtcgacggatccccggaatAACGTTTCGACTCACGAGCGACACA‑GACATCACGTTTTTCACTCCTGCTCCCTTCGAGGTATGCCGCGTGTCGTATAAAACTTTCTTTAAGGCTTCGGGTCAAGCATCAAAAAGCGGTCAAAtt > 2:625252‑M2/177‑300 (MQ=255) ggtcacacgcgcaaaaaaaagccagcctgtttccagactggcttttgtgcttttcaagccggtgttacatcgcttttttggtcaactcgataacgtgtaggctggagctgcttcgaagttcctatactttctagagaataggaacttcgaactgcaggtcgacggatccccggaatAACGTTTCGACTCACGAGCGACACA‑GACATCACGTTTTTCACTCCTGCTCCCTTCGAGGTATGCCGCGTGTCGTATAAAACTTTCTTTAAGGCTTAGAGTCACTCATCAAAAAGCGGTCAAAtt > 2:205170‑M2/177‑300 (MQ=255) cacgcgcaaaaaaaagccagcctgtttccagactggcttttgtgcttttcaagccggtgttacatcgcttttttggtcaactcgataacgtgtaggctggagctgcttcgaagttcctatactttctagagaataggaacttcgaactgcaggtcgacggatccccggaatAACGTTTCGACTCACGAGCGACACA‑GACATCACGTTTTTCACTCCTGCTCCCTTCGAGGTATGCCGCGTGTCGTATAAAACTTTCTTTAAGGCTTAGAGTCAAGCATCAAAAAGCGGTCAAATTATACgg < 1:649246‑M2/130‑1 (MQ=255) acgcgcaaaaaaaagccagcctgtttccagactggcttttgtgcttttcaagccggtgttacatcgcttttttggtcaactcgataacgtgtaggctggagctgcttcgaagttcctatactttctagagaataggaacttcgaactgcaggtcgacggatccccggaatAACGTTTCGACTCACGAGCGACACA‑GACATCACGTTTTTCACTCCTGCTCCCTTCGAGGTATGCCGCGTGTCGTATAAAACTTTCTTTAAGGCTTAGAGTCAAGCATCAAAAAGCGGTCAAATTATACgg < 1:126670‑M2/130‑1 (MQ=255) cgcgcaaaaaaaagccagcctgtttccagactggcttttgtgcttttcaagccggtgttacatcgcttttttggtcaactcgataacgtgtaggctggagctgcttcgaagttcctatactttctagagaataggaacttcgaactgcaggtcgacggatccccggaatAACGTTTCGACTCACGAGCGACACA‑GACATCACGTTTTTCACTCCTGCTCCCTTCGAGGTATGCCGCGTGTCGTATAAAACTTTCTTTAAGGCTTAGAGTCAAGCATCAAAAAGCGGTCAAATTATAc < 1:571101‑M2/128‑1 (MQ=255) aaaaaaagccagcctgtttccagactggcttttgtgcttttcaagccggtgttacatcgcttttttggtcaactcgataacgtgtaggctggagctgcttcgaagttcctatactttctagagaataggaacttcgaactgcaggtcgacggatccccggaatAACGTTTCGACTCACGAGCGACACA‑GACATCACGTTTTTCACTCCTGCTCCCTTCGAGGTATGCCGCGTGTCGTATAAAACTTTCTTTAAGGCTTAGAGTCAAGCATCAAAAAGCGGTCAAATTATACGGTGCGcccc < 2:428313‑M2/138‑1 (MQ=255) aaaaaaagacagcttgtttccagactgcattttgtgtttttcaagccggtgttacatcgcttttttggtcaactcgataacgtgtaggctggagctgcttcgaagttcctatactttctagagaataggaacttcgaactgcaggtcgacggatccccggaatAACGTTTCGACTCACGAGCGACACA‑GACATCACGTTTTTCACTCCTGCTCCCTTCGAGGTATGCCGCGTGTCGTATAAAACTTTCTTTAAGGCTTAGAGTCAAGCATCAAAAAGCGGTCAAATTATACgg < 1:285202‑M2/130‑1 (MQ=255) aaaaaagccagcctgtttccagactggcttttgtgcttttcaagccggtgttacatcgcttttttggtcaactcgataacgtgtaggctggagctgcttcgaagttcctatactttctagagaataggaacttcgaactgcaggtcgacggatccccggaatAACGTTTCGACTCACGAGCGACACA‑GACATCACGTTTTTCACTCCTGCTCCCTTCGAGGTATGCCGCGTGTCGTATAAAACTTTCTTTAAGGCTTAGAGTCAAGCATCAAAAAGCGGTCAAATTATACGGTGCGcc > 2:255086‑M2/163‑298 (MQ=255) gtttccagactggcttttgtgcttttcaagccggtgttacatcgcttttttggtcaactcgataacgtgtaggctggagctgcttcgaagttcctatactttctagagaataggaacttcgaactgcaggtcgacggatccccggaatAACGTTTTGACTCACGAGCGACACA‑GACATCACGTTTTTCACTCCTGCTCCCTTCGAGGTATGCCGCGTGTCGTATACAACTTTCTTCAAGGCTTAGAGTCAAGCATCAAAAACCGGTCAAATTATACGGTGCGCCCCCGCGATTTaaaa > 1:636052‑M2/149‑298 (MQ=255) tttgtgcttttcaagccggtgttacatcgcttttttggtcaactcgataacgtgtaggctggagctgcttcgaagttcctatactttctagagaataggaacttcgaactgcaggtcgacggatccccggaatAACGTTTCGACTCACGAGCGACACA‑GACATCACGTTTTTCACTCCTGCTCCCTTCGAGGTATGCCGCGTGTCGTATAAAACTTTCTTTAAGGCTTAGAGTCAAGCATCAAAAAGCGGTCAAATTATACGGTGCGCCCCCGTGATTTCAAACAATAAGTAGCCAAAAgg < 2:492382‑M2/168‑1 (MQ=255) cttttcaagccggtgttacatcgcttttttggtcaactcgataacgtgtaggctggagctgcttcgaagttcctatactttctagagaataggaacttcgaactgcaggtcgacggatccccggaatAACGTTTCGACTCACGAGCGACACA‑GACATCACGTTTTTCACTCCTGCTCCCTTCGAGGTATGCCGCGTGTCGTATAAAACTTTCTTTAAGGCTTAGAGTCAAGCATCAAAAAGCGGTCAAATTATACGGTGCGCCCCCGTGATTTCAAACAATAAGTAGCCAAAAGGTGAAt < 2:7223‑M2/173‑1 (MQ=255) gtgttacatcgcttttttggtcaactcgataacgtgtaggctggagctgcttcgaagttcctatactttctagagaataggaacttcgaactgcaggtcgacggatccccggaatAACGTTTCGACTCACGAGCGACACA‑GACATCACGTTTTTCACTCCTGCTCCCTTCGAGGTATGCCGCGTGTCGTATAAAACTTTCTTTAAGGCTTAGAGTCAAGCATCAAAAAGCGGTCAAATTATACGGTGCGcccc > 1:318745‑M2/116‑253 (MQ=255) gtgttacatcgcttttttcgtcaactcgataacgtgtaggctggagctgcttcgaagttcctatactttctagagaataggaacttcgaactgcaggtcgacggatccccggaatAACGTTTCGACTCACGAGCGACACA‑GACATCACGTTTTTCACTCCTGCTCCCTTCGAGGTATGCCGCGTGTCGTATAAAACTTTCTTTAAGGCTTAGAGTCAAGCATCAAAAAGCGGTCAAATTATACGGTGCGcccc < 2:318756‑M2/138‑1 (MQ=255) ttttttggtcaactcgataacgtgtaggctggagctgcttcgaagttcctatactttctagagaataggaacttcgaactgcaggtcgacggatccccggaatAACGTTTCGACTCACGAGCGACACA‑GACATCACGTTTTTCACTCCTGCTCCCTTCGAGGTATGCCGCGTGTCGTATAAAACTTTCTTTAAGGCTTAGAGTCAAGCATCAAAAAGCGGTCAAATTATACGGTGCGCCCCCGTGATTTCAAACAATAAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGc < 1:625238‑M2/198‑1 (MQ=255) acagagaacgtttaggctggagatgcttcgaagttcctatactttctagcgaatatgaacttcggactgcaggtcgacggatcccctgaatAACGTTTCGACTCACGAGCGACACA‑GACATCACGTTTTTCACTCCTGCTCCCTTCGAGGTAGGCCGCGTGTCGTATAAAACTTTCTTTAAGGCTTAGAGTCAAGCATCAAAAAGCGGTCAAATTATACGGTGCGCCCCCGTGATTTCAAACAATAAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTg < 1:231213‑M2/197‑1 (MQ=255) gataacgtgtaggctggagctgcttcgaagttcctatactttctagagaataggaacttcgaactgcaggtcgacggatccccggaatAACGTTTCGACTCACGAGCGACACA‑GACATCACGTTTTTCACTCCTGCTCCCTTCGAGGTATGCCGCGTGTCGTATAAAACTTTCTTTAAGGCTTAGAGTCAAGCATCAAAAAGCGGTCAAATTATACGGTGCGCCCCCGTGa > 2:71636‑M2/89‑231 (MQ=255) gataacgtgtaggctggagctgcttcgaagttcctatactttctagagaataggaacttcgaactgcaggtcgacggatccccggaatAACGTTTCGACTCACGAGCGACACA‑GACATCACGTTTTTCACTCCTGCTCCCTTCGAGGTATGCCGCGTGTCGTATAAAACTTTCTTTAAGGCTTAGAGTCAAGCATCAAAAAGCGGTCAAATTATACGGTGCGCCCCCGTGa < 1:71633‑M2/143‑1 (MQ=255) ataacgtgtaggctggagctgcttcgaagttcctatactttctagagaataggaacttcgaactgcaggtcgacggatccccggaatAACGTTTCGACTCACGAGCGACACA‑GACATCACGTTTTTCACTCCTGCTCCCTTCGAGGTATGCCGCGTGTCGTATAAAACTTTCTTTAAGGCTTAGAGTCAAGCATCCAAAAGCGGTCAAATTATACGGTGCGCCCCCGTGATTTCAAACAATAAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCa > 2:231223‑M2/88‑281 (MQ=255) ngtgtaggctggagctgcttcgaagttcctatactttctagagaataggaacttcgaactgcaggtcgacggatccccggaatAACGTTTCGACTCACGAGCGACACA‑GACATCACGTTTTTCACTCCTGCTCCATTCGAGGTATGCCGCGTGTCGTATAAAACTTTCTTTAAGGCTTAGAGTCAAGCATCAAAAAGCGGTCAAATTATACGGTGCGCCCCCGCGATTTCAAACAATAAGAAGCCAAAAGGTGAATACATGTTTAAATATTTTTACAGTGAATAAAATTGCGACtttt > 1:486151‑M2/84‑298 (MQ=255) gtaggctggagctgcttcgaagttcctatactttctagagaataggaacttcgaactgcaggtcgacggatccccggaatAACGTTTCGACTCACGAGCGACACA‑GACATCACGTTTTTCACTCCTGCTCCCTTCGAGGTATGCCGCGTGTCGTATAAAACTTTCTTTAAGGCTTAGAGTCAAGCATCAAAAAGCGGTCAAATTATACGGTGCGCCCCCGTGATTTCAAACAATAAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTg > 1:47309‑M2/81‑298 (MQ=255) ggctggagctgcttcgaagttcctatactttctagagaataggaacttcgaactgcaggtcgacggatccccggaatAACGTTTCGACTCACGAGCGACACA‑GACATCACGTTTTTCACTCCTGCTCCCTTCGAGGTATGCCGCGTGTCGTATAAAACTTTCTTTAAGGCTTAGAGTCAAGCATCAAAAAGCGGTCAAATTATACGGTGCGCCCCCGTGATTTCAAACAATAAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTTCTAAc > 1:119293‑M2/78‑300 (MQ=255) ctggagctgcttcgaagttcctatactttctagagaataggaacttcgaactgcaggtcgacggatccccggaatAACGTTTCGACTCACGAGCGACACA‑GACATCACGTTTTTCACTCCTGCTCCCTTCGAGGTATGCCGCGTGTCGTATAAAACTTTCTTTAAGGCTTAGAGTCAAGCATCAAAAAGCGGTCAAATTATACGGTGCGCCCCCGTGATTTCAAACAATAAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAAccc < 1:499915‑M2/225‑1 (MQ=255) gttcctatactttctagagaataggaacttcgaactgcaggtcgacggatccccggaatAACGTTTCGACTCACGAGCGACACA‑GACATCACGTTTTTCACTCCTGCTCCCTTCGAGGTATGCCGCGTGTCGTATAAAACTTTCTTTAAGGCTTAGAGTCAAGCATCAAAAAGCGGTCAAATTATACGGTGCGCCCCCGTGATTTCAAACAATAAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAACCCTGTTCGATCATGaaaaa > 2:169993‑M2/60‑301 (MQ=255) cctatactttctagagaataggaacttcgaactgcaggtcgacggatccccggaatAACGTTTCGACTCACGAGCGACACA‑GACATCACGTTTTTCACTCCTGCTCCCTTCGAGGTATGCCGCGTGTCGTATAAAACTTTCTTTAAGGCTTAGAGTCAAGCATCAAAAAGCGGTCAAATTATACGGTGCGCCCCCGTGATTTCAAACAATAAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAACCCTGTTCGATCATGAAAAACt > 1:622961‑M2/57‑300 (MQ=255) actttctagagaataggaacttcgaactgcaggtcgacggatccccggaatAACGTTTCGACTCACGAGCGACACA‑GACATCACGTTTTTCACTCCTGCTCCCTTCGAGGTATGCCGCGTGTCGTATAAAACTTTCTTTAAGGCTTAGAGTCAAGCATCAAAAAGCGGTCAAATTATACGGTGCGCCCCCGTGATTTCAAACAATAAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAACCCTGTTCGATCATGAAAAACTGTaa > 2:230850‑M2/52‑299 (MQ=255) actttctagagaataggaacttcgaactgcaggtcgacggatccccggaatAACGTTTCGACTCACGAGCGACACA‑GACATCACGTTTTTCACTCCTGCTCCCTTCGAGGTATGCCGCGTGTCGTATAAAACTTTCTTTAAGGCTTAGAGTCAAGCATCAAAAAGCGGTCAAATTATACGGTGCGCCCCCGTGATTTCAAACAATAAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAACCCTGTTCGATCATGAAAAACTGTAAAt < 2:119302‑M2/250‑1 (MQ=255) tttctagagaataggaacttcgaactgcaggtcgacggatccccggaatAACGTTTCGACTCACGAGCGACACA‑GACATCACGTTTTTCACTCCTGCTCCCTTCGAGGTATGCCGCGTGTCGTATAAAACTTTCTTTAAGGCTTAGAGTCAAGCATCAAAAAGCGGTCAAATTATACGGTGCGCCCCCGTGATTTCAAACAATAAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAACCCTGTTCGATCATGAAAAACTGTAAATaa > 2:193570‑M2/50‑301 (MQ=255) ttctagagaataggaacttcgaactgcaggtcgacggatccccggaatAACGTTTCGACTCACGAGCGACACA‑GACATCACGTTTTTCACTCCTGCTCCCTTCGAGGTATGCCGCGTGTCGTATAAAACTTTCTTTAAGGCTTAGAGTCAAGCATCAAAAAGCGGTCAAATTATACGGTGCGCCCCCGTGATTTCAAAAAATAAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAACCCTGTTCGATCATGAAAAACTGTAAATa > 2:312618‑M2/49‑299 (MQ=255) tgcaggtcgacggatccccggaatACCGTTTCGACTCACGAGCGACACA‑GACATCACGTTTTTCACTCCTGCTCCCTTCGAGGTATGCCGCGTGTCGTATAAAACTTTCTTTAAGGCTTAGAGTCAAGCATCAAAAAGCGGTCAAATTATACGGTGCGCCCCCGTGATTTCAAACAATAAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAACACTGGTGATAAAGCg < 1:255076‑M2/276‑1 (MQ=255) tgcagggagacggatccccggaatAACGTTTCGACTCACGAGCGACACA‑GACATCACGTTTTTCACTCCTGCTCCCTTCGAGGTATGCCGCGTGTCGTATAAAACTTTCTTTAAGGCTTAGAGTCAAGCATCAAAAAGCGGTCAAATTATACGGTGCGCCCCCGTGATTTCAAACAATAAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAACACTGGTGATAAAg < 2:390225‑M2/274‑1 (MQ=255) ggtcgacggatccccggaatAACGTTTCGACTCACGAGCGACACA‑GACATCACGTTTTTCACTCCTGCTCCCTTCGAGGTATGCCGCGTGTCGTATAAAACTTTCTTTAAGGCTTAGAGTCAAGCATCAAAAAGCGGTCAAATTATACGGTGCGCCCCCGTGATTTCAAACAATAAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCGGCTAACCCTGTTCGATCATGAAAAACTGTAAATAACCCGTAAACACTGGTGTTAAAGCGTGCt > 2:58075‑M2/21‑300 (MQ=255) gacggatccccggaatAACATTTCGACTCACGAGCGACACA‑GACATCACGTTTTTCACTCCTGCTCCCTGCGAGGTATGCCGCGTGTCGTATAAAACTTTCTTTAAGGCTTAGAGTCAAGCATCAAAAAGCGGTCAAATTATACGGTGCGCCCCCGTGATTTCAAACAATAAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAg < 1:58072‑M2/284‑1 (MQ=255) ccccggaatAACGTTTCGACTCACGAGCGACACA‑GACATCACGTTTTTCACTCCTGCTCCCTTCGAGGTATGCCGCGTGTCGTATAAAACTTTCTTTAAGGCTTAGAGTCAAGCATCAAAAAGCGGTCAAATTATACGGTGCGCCCCCGTGATTTCAAACAATAAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATcaca < 1:104158‑M2/290‑1 (MQ=255) cccggaatAACGTTTCGGCTCACGAGCGACACA‑GACATCACGTTTTTCACTCCGGCTCCCTTCGAGGTATGCCGCGTGTCGTATAAAACTTTCTTTAAGGCTTAGAGTCAAGCATCAAAAAGCGGTCAAATTATGCGGTGCGCCCCCGTGATTTCAAACAATAAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACatat < 2:636068‑M2/293‑1 (MQ=255) | AACCCACGTAACGATCAGCGGCAAGAATACCGCCTTTAAAACCGCCAACGCCACCACCAGTAACACCAACATCGCCAGAACTTTGAAAGCTTCGCCAAATGCGAATGTCCAGGCCACCCGGCCTTTCGCTGGTGTATGCGCCTGGTGACGCCAGGCAAATATCATAAACAAAACGTTAGGCAGAAAGACTGCCAGGCCCCCGCTTATTGCAGAGACGCCCCAGAAGGGGTCTTTGAGGCTGAACAGCAATCCACTTGCTATCACCACCAGTAACTGAACGAGCAGAAGCTTCCGAGCAACGTTTCGACTCACGAGCGACACA‑GACATCACGTTTTTCACTCCTGCTCCCTTCGAGGTATGCCGCGTGTCGTATAAAACTTTCTTTAAGGCTTAGAGTCAAGCATCAAAAAGCGGTCAAATTATACGGTGCGCCCCCGTGATTTCAAACAATAAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAACCCTGTTCGATCATGAAAAACTGTAAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATAT > NC_000913/3919362‑3919951 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |