Predicted mutation | ||||||
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evidence | seq id | position | mutation | annotation | gene | description |
RA | NC_000913 | 2,191,575 | (A)6→7 | coding (71/720 nt) | yehC ← | putative periplasmic pilin chaperone |
Read alignment evidence... | ||||||||||
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seq id | position | change | freq | score | reads | annotation | genes | product | ||
* | NC_000913 | 2,191,569 | 1 | .→A | 100.0% | 146.7 | 39 | coding (77/720 nt) | yehC | putative periplasmic pilin chaperone |
Reads supporting (aligned to +/- strand): new base (23/16): ref base (0/0): total (23/16) |
CTATTTTTGCCACTGGTGGCGTTAACATGAAAGGAACCTGAATTTTTTCTGGTGGTAATGACGTATCGCCATCATCAATCCACGCCTGCAGCAGCGAAGAACGGTTTCCCTGGTTCATCAACTGCACCATCACTTCTTTATTTTCTGCCGGGTAAATAATGCGCGTCCCGTAGATAACAATTCCGGCATGTGCAGGAAGGACCATAG‑AAAAAATGAGTAAAGATAATAATCCTTTCATTTTAATGCCTCTTAAATTAAAAGGCCGCCATGGGATAGCGGCCATGTTTATTACCTGGAGAAACTTACAATTTTATTTATTAATCCTGCGCCACACGCATAACCAGAGAAGATAACACATCACCTGATTGCACTGAGTTATCTGTCAGTTTCAGGTATTTTGCTTTAAACG > NC_000913/2191363‑2191771 | cTATTTTTGCCACTGGTGGCGTTAACATGAAAGGAACCTGAATTTTTTCTGGTGGTAATGACGTATCGCCATCATCAATCCACGCCTGCAGCAGCGAAGAACGGTTTCCCTGGTTCGTCAACTGCACCATCACTTCTTTATTTTCTGCCGGGTAAATAATGCGCGTCCCGTAGATAACAATTCCGGCATGTGCAGGAAGGACCATAG‑aaa > 1:205801/1‑210 (MQ=255) tttGCCACTGGTGGCGTTAACATGAAAGGAACCTGAATTTTTTCTGGTGGTAATGACGTATCGCCATCATCAATCCACGCCTGCAGCAGCGAAGAACGGTTTCCCTGGTTCATCAACTGCACCATCACTTCTTTATTTTCTGCCGGGTAAATAATGCGCGTCCCGTAGATAACAATTCCGGCATGTGCAGGAAGGACCATAG‑aaaaaaat < 1:184112/210‑3 (MQ=255) tttccccTGGTGGCGTTAACATGAAAGGAACCTGAATTTTTTCTGGTGGTAATGACGTATCGCCATCATCAATCCACGCCTGCAGCAGCGAAGAACGGTTTCCCTGGTTCATCAACTGCACCATCACTTCTTTATTTTCTGCCGGGTAAATAATGCGCGTCCCG‑AGATAACAATTCCGGCATGTGCAGGAAGGACCATAG‑aaaaaaatga < 2:455190/204‑5 (MQ=255) gCCACTGGTGGCGTTAACATGAAAGGAACCTGAATTTTTTCTGGTGGTAATGACGTATCGCCATCATCAATCCACGCCTGCAGCAGCGAAGAACGGTTTCCCTGGTTCATCAACTGCACCATCACTTCTTTATTTTCTGCCGGGTAAATAATGCGCGTCCCGTAGATAACAATTCCGGCATGTGCAGGAAGGACCATAG‑aaaaaaatgag < 2:51366/210‑6 (MQ=255) gCCACTGGTGGCGTTAACATGAAAGGAACCTGAATTTTTTCTGGTGGTAATGACGTATCGACATCATCAATCCACGCCTGCAGCAGCGAAGAACGGTTTCCCTGGTTCATCAACTGCACCATCACTTCTTTATTTTCTGCCGGGTAAATAATGCGCGTCCCGTAGATAACAATTCCGGCATGTGCAGGAAGGACCATAG‑aaaaaaatgag < 2:126800/210‑6 (MQ=255) cACTGGTGGCGTTAACATGAAAGGAACCTGAATTTTTTCTGGTGGTAATGACGTATCGCCATCATCAATCCACGCCTGCAGCAGCGAAGAACGGTTTCCCTGGTTCATCAACTGCACCATCACTTCTTTATTTTCTGCCGGGTAAATAATGCGCGTCCCGTAGATAACAATTCCGGCATGTGCAGGAAGGACCATAGAAAAAAATGAGTa < 2:122641/210‑1 (MQ=255) cTGGTGGCGTTAACATGAAAGGAACCTGAATTTTTTCTGGTGGTAATGACGTATCGCCATCATCAATCCACGCCTGCAGCAGCGAAGAACGGTTTCCCTGGTTCATCAACTGCACCATCACTTCTTTATTTTCTGCCGGGTAAATAATGCGCGTCCCGTAGATAACAATTCCGGCATGTGCAGGAAGGACCATAGAAAAAAATGAGTaaa < 2:215667/210‑1 (MQ=255) gCGTTAACATGAAAGAAACCTGAATTTTTTCTGGTGGTAATGACGTATCGCCATCATCAATCCCCGCCTGCAGCAGCGAAGAACGGTTTCCCTGGTTCATCAACTGCACCATCACTTCTTTATTTTCTGCCGGGTAAATAATGCGCGTCCCGTAGATAACAATTCCGGCATGTGCAGGAAGGACCATAGAAAAAAATGAGTAAAGataat < 1:408159/210‑1 (MQ=255) tgctcttccgatctaCCTGAATTTTTTCTGGTGGTAATGACGTATCGCCATCATCAATCCACGCCTGCAGCAGCGAAGAACGGTTTCCCTGGTTCATCAACTGCACCATCACTTCTTTATTTTCTGCCGGGTAAATAATGCGCGTCCCGTAGATAACAATTCCGGCATGTGCAGGAAGGACCATAGAAAAAAATGAGTAAAGATaataat < 1:36428/196‑1 (MQ=255) aCCTGAATTTTTTCTGGTGGTAATGACGTATCGCCATCATCAATCCACGCCTGCAGCAGCGAAGAACGGTTTCCCTGGTTCATCAACTGCACCATCACTTCTTTATTTTCTGCCGGGTAAATAATGCGCGTCCCGTAGATAACAATTCCGGCATGTGCAGGAAGGACCATAGAAAAAAATGAGTAAAGATaataatagatcggaagagcg > 2:36426/1‑196 (MQ=255) tGAATCTTTTCTGGTGGTAATGACGTATCGCCATCATCAATCCACGCCTGCAGCAGCGAAGAACGGTTTCCCTGGTTCATCAACTGCACCATCACTTCTTTATTTTCTGCCGGGTAAATAATGCGCGTCCCGTAGATAACAATTCCGGCATGTGCAGGAAGGACCATAGAAAAAAATGAGTAAAGATAATAATCCTTTCATTTTAATGcc > 2:173705/1‑210 (MQ=255) aTTTTTTCTGGTGGTAATGACGTATCGCCATCATCAATCCACGCCTGCAGCAGCGAAGAACGGTTTCCCTGGTTCATCAACTGCACCATCACTTCTTTATTTTCTGCCGGGTAAATAATGCGCGTCCCGTAGATAACAATTCCGGCATGTGCAGGAAGGACCATAGAAAAAAATCAGTAAAGATAATAATCCTTTCATTTTAATGCctct > 2:387891/1‑210 (MQ=255) ttCTGGTGGTAATGACGTATCGCCATCATCAATCCACGCCTGCAGCAGCGAAGAACGGTTTCCCTGGTTCATCAACTGCACCATCACTTCTTTATTTTCTGCCGGGTAAATAATGCGCGTCCCGTAGATAACAATTCCGGCATGTGCAGGAAGGACCATAGAAAAAAATGAGTAAAGATAATAATCCTTTCATTTTAATGCCTCttaaat < 1:221591/210‑1 (MQ=255) tCTGGTGGTAATGACGTATCGCCATCATCAATCCACGCCTGCAGCAGCGAAGAACGGTTTCCCTGGTTCATCAACTGCACCATCACTTCTTTATTTTCTGCCGGGTAAATAATGCGCGTCCCGTAGATAACAATTCCGGCATGTGCAGGAAGGACCATAGAAAAAAATGAGTAAAGATAATAATCCTTTCATTTTAATGCCTCttaaatt < 1:91738/210‑1 (MQ=255) ggtggtAATGACGTATCGCCATCATCAATCCACGCCTGCAGCAGCGAAGAACGGTTTCCCTGGTTCATCAACTGCACCATCACTTCTTTATTTTCTGCCGGGTAAATAATGCGCGTCCCGTAGATAACAATTCCGGCATGTGCAGGAAGGACCATAGAAAAAAATGAGTAAAGATAATAATCCTTTCATTTTAATGCCTCttaaattaaa > 1:79623/1‑210 (MQ=255) tAATGACGTATCGCCATCATCAATCCACGCCTGCAGCAGCGAAGAACGGTTTCCCTGGTTCATCAACTGCACCATCACTTCTTTATTTTCTGCCGGGTAAATAATGCGCGTCCCGTAGATAACAATTCCGGCATGTGCAGGAAGGACCATAGAAAAAAATGAGTAAAGATAATAATCCTTTCATTTTAATGCCTCTTAAATTAAAAGgcc < 1:381456/210‑1 (MQ=255) catcaATCCACGCCTGCAGCAGCGAAGAACGGTTTCCCTGGTTCATCAACTGCACCATCACTTCTTTATTTTCTGCCGGGTAAATAATGCGCGTCCCGTAGATAACAATTCCGGCATGTGCAGGAAGGACCATAGAAAAAAATGAGTAAAGATAATAATCCTTTCATTTTAATGCCTCTTAAATTAAAAGGCCGCCATGGGATAGCGGcc > 1:1363/1‑210 (MQ=255) cagcagCGAAGAACGGTTTCCCTGGTTCATCAACTGCACCATCACTTCTTTATTTTCTGCCGGGTAAATAATGCGCGTCCCGTAGATAACAATTCCGGCATGTGCAGGAAGGACCATAGAAAAAAATGAGTAAAGATAATAATCCTTTCAGTTTAATGCCTCTTAAATTAAAAGGCCGCAATGTGATAGCGGCCATGTTTATTAccatga > 2:39852/1‑206 (MQ=255) cgatctaCGGTTTCCCTGGTTCATCAACTGCACCATCACTTCTTTATTTTCTGCCGGGTAAATAATGCGCGTCCCGTAGATAACAATTCCGGCATGTGCAGGAAGGACCATAGAAAAAAATGAGTAAAGATAATAATCCTTTCATTTTAATGCCTCTTAAATTAAAAGGCCGCCATGGGATAGCGGCCATGTTTATTACCTGGAGAAACt < 1:299229/204‑1 (MQ=255) agaaCGGTTTCCCTGGTTCATCAACTGCACCATCACTTCTTTATTTTCTGCCGGGTAAATAATGCGCGTCCCGTAGATAACAATTCCGGCATGTGCAGGAAGGACCATAGAAAAAAATCAGTAAAGATAATAATCCTTTCATTTTAATGCCTCTTAAATTAAAAGGCCGCCATGGGATAGCGGCCATGTTTATTACCTGGAGAAACTTAc < 1:387915/210‑1 (MQ=255) aCGGTTTCCCTGGTTCATCAACTGCACCATCACTTCTTTATTTTCTGCCGGGTAAATAATGCGCGTCCCGTAGATAACAATTCCGGCATGTGCAGGAAGGACCATAGAAAAAAATGAGTAAAGATAATAATCCTTTCATTTTAATGCCTCTTAAATTAAAAGACCGCCATGGGATAGCGGCCATGTTTATTACCTGGAGAAACtatatcg > 2:299213/1‑204 (MQ=255) tttCCCTGGTTCATCAACTGCACCATCACTTCTTTATTTTCTGCCGGGTAAATAATGCGCGTCCCGTAGATAACAATTCCGGCATGTGCAGGAAGGACCATAGAAAAAAATGAGTAAAGATAATAATCCTTTCATTTTAATGCCTCTTAAATTAAAAGGCCGCCATGGGATAGCGGCCATGTTTATTACCTGGAGAAACTTACAAtttca < 1:373095/210‑3 (MQ=255) tttCCCTGGTTCATCAAATGCACCATCACTTCTTTAATTTCTGCCGGGTAAATAATGCGCGTCCCGTAGATAACAATTCCGGCATGTGCAGGAAGGACCATAGAAAAAAATGAGTAAAGATAATAATCCTTTCATTTTAATGCCTCTTAAATTAAAAGGCCGCCATGGGATAGCGGCCATGTTTATTACCTGGAGAAACTTACAATttta < 1:154154/210‑1 (MQ=255) ccTGGTTCATCAACTGCACCATCACTTCTTTATTTTCTGCCGGGTAAATAATGCGCGTCCCGTAGATAACAATTCCGGCATGTGCAGGAAGGACCATAGAAAAAAATGAGTAAAGATAATAATCCTTTCATTTTAATGCCTCTTAAATTAAAAGGCCGCCATGGGATAGCGGCCATGTTTATTACCTGGAGAAACTTACAATtttattta > 1:460966/1‑210 (MQ=255) catcaACTGCACCATCACTTCTTTATTTTCTGCCGGGTAAATAATGCGCGTCCCGTAGATAACAATTCCGGCATGTGCAGGAAGGACCATAGAAAAAAATGAGTAAAGATAATAATCCTTTCATTTTAATGCCTCCTAAATTAAAAGGCCGCCATGGGATAGCGGCCATGTTTATTACCTGGATACACTTACAATTTTATTTATTATTca > 1:440181/1‑209 (MQ=255) ccATCACTTCTTTATTTTCTGCCGGGTAAATAATGCGCGTCCCGTAGATAACAATTCCGGCATGTGCAGGAAGGACCATAGAAAAAAATGAGTAAAGATAATAATCCTTTCATTTTAATGCCTCTTAAATTAAAAGGCCGCCATGGGATAGCGGCCATGTTTATTACCTGGAGAAACTTACAATTTTATTTATTAATCCTGCGCCACACg > 2:67526/1‑210 (MQ=255) aTCACTTCTTTATTTTCTGCCGGGTAAATAATGCGCGTCCCGTAGATAACAATTCCGGCATGTGCAGGAAGGACCATAGAAAAAAATGAGTAAAGATAATAATCCTTTCATTTTAATGCCTCTTAAATTAAAAGGCCGCCATGGGATAGCGGCCATGTTTATTACCTGGAGAAACTTACAATTTTATTTATTAATCCTGCGCCACACGCa > 1:43991/1‑210 (MQ=255) tttATTTTCTGCCGGGTAAATAATGCGCGTCCCGTAGATAACAATTCCGGCATGTGCAGGAAGGACCATAGAAAAAAATGAGTAAAGATAATAATCCTTTCATTTTAATGCCTCTTAAATTAAAAGGCCGCCATGGGATAGCGGCCATGTTTATTACCTGGAGAAACTTACAATTTTATTTATTAATTCTGCGCCACCTGCATAACCaga > 2:363274/1‑210 (MQ=255) tATTTTCTGCCGGGTAAATAATGCGCGTCCCGTAGATAACAATTCCGGCATGTGCAGGAAGGACCATAGAAAAAAATGAGTAAAGATAATAATCCTTTCATTTTAATGCCTCTTAAATTAAAAGGCCGCCATGGGATATCGGCCATGTTTATTACCTGGAGAAACTTACAATTTTATTTATTAATCCTGCGCCACACTCATAACCAgaga > 1:482512/1‑210 (MQ=255) tttCTGCCGGGTAAATAATGCGCGTCCCGTAGATAAAAATTCCGGAATGTGCAGGAAGGACCATAGAAAAAAATGAGTAAAGATAATAATCCTTTCATTTTAATGCCTCTTAAATTAAAAGGCCGCCATGGGATAGCGGCCATGTTTATTACCTGGAGAAACTTACAATTTTATTTATTAATCCTGCGCCACACGCATAACCAGagaaga < 2:329995/210‑1 (MQ=255) tGCCGGGTAAATAATGCGCGTCCCGTAGATAACAATTCCGGCATGTGCAGGAAGGACCATAGAAAAAAATGAGTAAAGATAATAATCCTTTCATTTTAATGCCTCTTAAATTAAAAGGCCGCCATGGGATAGCGGCCATGTTTATTACCTGGAGAAACTTACAATTTTATTTATTAATCCTGCGCCACACGCATAACCAGAGAAGATAac > 1:148372/1‑210 (MQ=255) ccGGGTAAATAATGCGCGTCCCGTAGATAACAATTCCGGCATGTGCAGGAAGGACCATAGAAAAAAATGAGTAAAGATAATAATCCTTTCATTTTAATGCCTCTTAAATTAAAAGGCCGCCATGGGATAGCGGCCATGTTTATTACCTGGAGAAACTTACAATTTTATTTATTAATCCTGCGCCACACGCATAACCAGAGAAGATAacac > 1:253669/1‑210 (MQ=255) ccGGGTAAATAATGCGCGTCCCGTAGATAACAATTCCGGCATGTGCAGGAAGGACCATAGAAAAAAATGAGTAAAGATAATAATCCTTTCATTTTAATGCCTCTTAAATTAAAAGGCCGCCATGGGATAGCGGCCATGTTTATTACCTGGAGAAACTTACAATTTTATTTATTAATCCTGCGCCACACGCATAACCAGAGAAGATAacac > 2:58618/1‑210 (MQ=255) ggTAAATAATGCGCGTCCCGTAGATAACAATTCCGGCATGTGCAGGAAGGACCATAGAAAAAAATGAGTAAAGATAATAATCCTTTCATTTTAATGCCTCTTAAATTAAAAGGCCGCCATGGGATAGCGGCCATGTTTATTACCTGGAGAAACTTACAATTTTATTTATTAATCCTGCGCCACACGCATAACCAGAGAAGATAACACATc > 1:404531/1‑210 (MQ=255) tAAAGAATGCGCGTCCCGTAGATAACAATTCCGGCAGGTGCAGGAAGGACCATAGAAAAAAATGAGTAAAGATAATAATCCTTTCATTTTAATGCCTCTTAAATTAAAAGGCCGCCATGGGATAGCGGCCATGTTTATTACCTGGAGAAACTTACAATTTTATTTATTAATCCTGCGCCACACGCATAACCAGAGAAGATAACACATCAc < 2:213959/210‑1 (MQ=255) aataatGCGCGTCCCGTAGATAACAATTCCGGCATGTGCAGGAAGGACCATAGAAAAAAATGAGTAAAGATAATAATCCTTTCATTTTAATGCCTCTTAAATTAAAAGGCCGCCATGGGATAGCGGCCATGTTTATTACCTGGAGAAACTTACAATTTTATTTATTAATCCTGCGCCACACGCATAACCAGAGAAGATAACACATCACCt < 1:183118/210‑1 (MQ=255) taatGGGCGTCCCGTAGATAACAATTCCGGCATGTGCAGCAAGGACCATAGAAAAAAATGAGTAAAGATAATAAGCCTTTCATTTTAATGCATATTAAATTAAAAGGCCGCAATAGGATAGCGGCCATGTTTATTACGTTGAGAAACGTACGATTATATTTATTATTTCTGCGCAAAACCGATAACCAGAGACGATAATAGATCActgga > 1:103321/1‑206 (MQ=255) cccGTAGATAACAATTCCGGCATGTGCAGGAAGGACCATAGAAAAAAATGAGTAAAGATAATAATCCTTTCATTTTAATGCCTCTTAAATTAAAAGGCCGCCATGGGATAGCGGCCATGTTTATTACCTGGAGAAACTTACAATTTTATTTATTAATCCTGCGCCACACGCATAACCAGAGAAGATAACACATCACCTGATTGCACTGAg < 1:333948/210‑1 (MQ=255) ccGTAGATAACAATTCCGGCATGTGCAGGAAGGACCATAGAAAAAAATGAGTAAAGATAATAATCCTTTCATTTTAATGCCTCTTAAATTAAAAGGCCGCCATGGGATAGCGGCCATGTTTATTACCTGGAGAAACTTACAATTTTATTTATTAATCCTGCGCCACACGCATAACCAGAGAAGATAACACATCACCTGATTGCACTGAGt < 2:79621/210‑1 (MQ=255) tAACAATTCCGGCATGTGCAGGAAGGACCATAGAAAAAAATGAGTAAAGATAATAATCCTTTCATTTTAATGCCTCTTAAATTAAAAGGCCGCCATGGGATAGCGGCCATGTTTATTACCTGGAGAAACTTACAATTTTATTTATTAATCCTGCGCCACACGCATAACCAGAGAAGATAACACATCACCTGATTGCACTGAGTTATCTGt > 2:241996/1‑210 (MQ=255) cAATTCCGGCATGTGCAGGAAGGACCATAGAAAAAAATGAGTAAAGATAATAATCCTTTCATTTTAATGCCTCTTAAATTAAAAGGCCGCCATGGGATAGCGGCCATGTTTATTACCTGGAGAAACTTACAATTTTATTTATTAATCCTGCGCCACACGCATAACCAGAGAAGATAACACATCACCTGATTGCACTGAGTTATCTGTCAg > 1:153213/1‑210 (MQ=255) cGGCATGTGCAGGAAGGACCATAGAAAAAAATGAGTAAAGATAATAATCCTTTCATTTTAATGCCTCTTAAATTAAAAGGCAGCCATGGGATCGCGGACATGTTTATTCCCTGGAGAAACTTACAATTTTATTTATTAATCCTGCGCCACACGCATAACCACAGAAGATAAAACATCACCTGATTCCACTCAGTTTTCTGTCAGTCTccg > 2:404231/1‑208 (MQ=255) aCCATAGAAAAAAATGAGTAAAGATAATAATCCTTTCATTTTAATGCCTCTTAAATTAAAAGGCCGCCATGGGATAGCGGCCATGTTTATTACCTGGAGAAACTTACAATTTTATTTATTAATCCTGCGCCACACGCATAACCAGAGAAGATAACACATCACCTGATTGCACTGAGTTATCTGTCAGTTTCAGGTATTTTGCTTTAAACg > 1:198421/1‑210 (MQ=255) aCCATAGAAAAAAATGAGTAAAGATAATAATCCTTTCATTTTAATGCCTCTTAAATTAAAAGGCCGCCATGGGATAGCGGCCATGTTTATTACCTGGAGAAACTGACAATTTTATTTATTAATCCTGCGCCACACGCATAACCAGAGAAGATAACACATCACCTGATTGCACTGAGTTATCTGTCAGGTTCAGGTATTTTGCTTTAAACg > 1:398237/1‑210 (MQ=255) | CTATTTTTGCCACTGGTGGCGTTAACATGAAAGGAACCTGAATTTTTTCTGGTGGTAATGACGTATCGCCATCATCAATCCACGCCTGCAGCAGCGAAGAACGGTTTCCCTGGTTCATCAACTGCACCATCACTTCTTTATTTTCTGCCGGGTAAATAATGCGCGTCCCGTAGATAACAATTCCGGCATGTGCAGGAAGGACCATAG‑AAAAAATGAGTAAAGATAATAATCCTTTCATTTTAATGCCTCTTAAATTAAAAGGCCGCCATGGGATAGCGGCCATGTTTATTACCTGGAGAAACTTACAATTTTATTTATTAATCCTGCGCCACACGCATAACCAGAGAAGATAACACATCACCTGATTGCACTGAGTTATCTGTCAGTTTCAGGTATTTTGCTTTAAACG > NC_000913/2191363‑2191771 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |