New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	2553449 =	47 (1.020)	3 (0.070)	3/412	8.0	6.0%	coding (225/900 nt)	hemF	coproporphyrinogen III oxidase
	?	NC_000913	2553496 =	48 (1.060)					coding (272/900 nt)	hemF	coproporphyrinogen III oxidase
Rejected: Position hash score below cutoff.

ATGCCAGTGAATAGCATCTTCTTCAAAACCATAGAATGGGGTTAAGTCGAAGCCACCGCCAAACCACCAGACGGGATCGGCACCCGGTTTTTCGGCAATAAAAAACCGCACATTCGCGTGGCTGGTGGGAACATACGGGTTATGCGGATGCACTACCAGTGAAACGCCCATCGCCTCGAAACTGCGCCCGGCAAGTTCCGGGCGATGAGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/2553659‑2553449 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgTTTCACTGGTAGTGCATCCGCATAACCCGTATGTTCCCACCAGCCACGCGAATGTGCGGTTTTTTATTGCCGAAAAACCGGGTGCCGATCCCGTCTGGTGGTTTGGCGGTGGCTTCGACTTAACCCCATTCTATGGTTTTGAAGAAGATGCTATTCACTGGCATC  >  NC_000913/2553496‑2553660                                                                                                                                                                                                                                                                                                                                                                                          ATGCCAGTGAATAGCATCTTCTTCAAAACCATAGAATGGGGTTAAGTCGAAGCCACCGCCAAACCACCAGACGGGATCGGCACCCGGTTTTTCGGCAATAAAAAACCGCACATTCGCGTGGCTGGTGGGAACATACGGGTTATGCGGATGCACTACCAGTGAAACGCCCATCGCCTCGAAACTGCGCCCGGCAAGTTCCGGGCGATGAGC                                                                                                                                                                        <  2:33304/210‑1                                                                                                                                                 gctcttccgatctAGTGAAACGCCCATCGCCTCGAAACTGCGCCCGGCAAGTTCCGGGCGATGAGCGTTTCACTGGTAGTGCATCCGCATAACCCGTATGTTCCCACCAGCCACGCGAATGTGCGGTTTTTTATTGCCGAAAAACCGGGTGCCGATCCCGTCTGGTGGTTTGGCGGTGGCTTCGACTTAACCCCATTCTATGGTTTTGAA                        <  2:430841/197‑1                                                                                                                                                              AGTGAAACGCCCATCGCCTCGAAACTGCGCCCGGCAAGTTCCGGGCGATGAGCGTTTCACTGGTAGTGCATCCGCATAACCCGTATGTTCCCACCAGCCACGCGAATGTGCGGTTTTTTATTGCCGAAAAACCGGGTGCCGATCCCGTCTGGTGGTTTGGCGGTGGCTTCGACTTAACCCCATTCTATGGTTTTGAAagatcggaagagc           >  1:430818/1‑197                                                                                                                                                                       CCCATCGCCTCGAAACTGCGCCCGGCAAGTTCCGGGCGATGGGCGTTTCACTGGTAGTGCATCCGCATAACCCGTATGTTCCCACCAGCCACGCGAATGTGCGGTTTTTTATTGCCGAAAAACCGGGTGCCGATCCCGTCTGGTGGTTTGGCGGTGGCTTCGACTTAACCCCATTCTATGGTTTTGAAGAAGATGCTATTCACTGGCATC  >  2:31621/1‑210                                                                                                                                                                                                                                                                                                                                                                                          ATGCCAGTGAATAGCATCTTCTTCAAAACCATAGAATGGGGTTAAGTCGAAGCCACCGCCAAACCACCAGACGGGATCGGCACCCGGTTTTTCGGCAATAAAAAACCGCACATTCGCGTGGCTGGTGGGAACATACGGGTTATGCGGATGCACTACCAGTGAAACGCCCATCGCCTCGAAACTGCGCCCGGCAAGTTCCGGGCGATGAGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/2553659‑2553449 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgTTTCACTGGTAGTGCATCCGCATAACCCGTATGTTCCCACCAGCCACGCGAATGTGCGGTTTTTTATTGCCGAAAAACCGGGTGCCGATCCCGTCTGGTGGTTTGGCGGTGGCTTCGACTTAACCCCATTCTATGGTTTTGAAGAAGATGCTATTCACTGGCATC  >  NC_000913/2553496‑2553660

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.