| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2763709 | 49 (1.060) | 3 (0.070) | 3/412 | 8.0 | 6.2% | coding (1445/1617 nt) | yfjL | CP4‑57 putative defective prophage, DUF4297/DUF1837 polymorphic toxin family protein |
| ? | NC_000913 | = 2763778 | 42 (0.920) | coding (1376/1617 nt) | yfjL | CP4‑57 putative defective prophage, DUF4297/DUF1837 polymorphic toxin family protein | |||||
| Rejected: Position hash score below cutoff. | |||||||||||
AACCGCTCAAGACTCGGGGCTGGATAAATGAATACGTGGATGCAAAGATTCGCAAACGGCGAATCCTCGATGAGGTCAGCCGCGAATTTTTCGAACAGCACCGCTGTTTCTTTCTCCAGGTCATCCTCGAACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2763577‑2763709‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accTCGATCGTTTCACGTTTGTTCTGTTCGTGGGCTACGACTCTAATCTACTAACCGAGCCTGAAACGCCGGGGTTCGAGGATGACCTGGAGAAAGAAACAGCGGTGCTGTTCGAAAAATTCGCGGCTGACCTCATCGAGGATTCGCCGTTTGCGAATCTTTGCATCCACGTATTCATTTATCCAGCCCCGAGTCTTGAGCGGTTAACCCA < NC_000913/2763778‑2763571 AACCGCTCAAGACTCGGGGCTGGATAAATGAATACGTGGATGCAAAGATTCGCAAACGGCGAATCCTCGATGAGGTCAGCCGCGAATTTTTCGAACAGCACCGCTGTTTCTTTCTCCAGGTCATCCTCGAACCTCGATCGTTTCACGTTTGTTCTGTTCGTGGGCTACGACTCTAATCTACTAACCGAGCCTGAAACGCCGGGGTTCGAG < 1:119450/210‑1 GCTCAAGACTCGGGGCTGGATAAATGAATACGTGGATGCAAAGATTCGCAAACGGCGAATCCTCGATGAGGTCAGCCGCGAATTTTTCGAACAGCACCGCTGTTTCTTTCTCCAGGTCATCCTCGAACCTCGATCGTTTCACGTTTGTTCTGTTCGTGGGCTACGACTCTAATCTACTAACCGAGCCTGAAACGCCGGGGTTCGAGGATG < 2:496885/210‑1 AACCTCGATCGGTTCACGTTTGTTCTGTTCGTGGGCTACGACTCTAATCTACTAACCGAGCCTGAAACGCCGGGGTTCGAGGATGACCTGGAGAAAGAAACAGCGGTGCTGTTCGAAAAATTCGCGGCTGACCTCATCGAGGATTCGCCGTTTGCGAATCTTTGCATCCACGTATTCATTTATCCAGCCCCGAGTCTTGAGCGGTTAACC < 1:494486/210‑1 CCTCGATCGTTTCACGTTTGTTCTGTTCGTGGGCTACGACTCTAATCTACTAACCGAGCCTGAAACGCCGGGGTTCGAGGATGACCTGGAGAAAGAAACAGCGGTGCTGTTCGAAAAATTCGCGGCTGACCTCATCGAGGATTCGCCGTTTGCGAATCTTTGCATCCACGTATTCATTTATCCAGCCCCGCGTCTTGAGCGGTTAACCCA > 1:152799/1‑210 AACCGCTCAAGACTCGGGGCTGGATAAATGAATACGTGGATGCAAAGATTCGCAAACGGCGAATCCTCGATGAGGTCAGCCGCGAATTTTTCGAACAGCACCGCTGTTTCTTTCTCCAGGTCATCCTCGAACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2763577‑2763709‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accTCGATCGTTTCACGTTTGTTCTGTTCGTGGGCTACGACTCTAATCTACTAACCGAGCCTGAAACGCCGGGGTTCGAGGATGACCTGGAGAAAGAAACAGCGGTGCTGTTCGAAAAATTCGCGGCTGACCTCATCGAGGATTCGCCGTTTGCGAATCTTTGCATCCACGTATTCATTTATCCAGCCCCGAGTCTTGAGCGGTTAACCCA < NC_000913/2763778‑2763571 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |