| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 240,339 | Δ33,616 bp | IS5‑mediated | ivy–[ykfC] | 44 genes ivy, fadE, gmhA, yafJ, yafK, yafQ, dinJ, yafL, rayT, lfhA, lafU, dinB, yafN, yafO, yafP, ykfJ, prfH, pepD, gpt, frsA, crl, crl, phoE, proB, proA, thrW, ykfN, ykfI, yafW, ykfH, ykfG, yafX, ykfF, ykfB, yafY, ykfL, ykfK, yafZ, ykfA, perR, insN, insI1, insN, [ykfC] |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 240339 | 275018–273955 | 33617–34680 | 47 [1] | [22] 23 | ivy–[insH1] | 45 genes ivy, fadE, gmhA, yafJ, yafK, yafQ, dinJ, yafL, rayT, lfhA, lafU, dinB, yafN, yafO, yafP, ykfJ, prfH, pepD, gpt, frsA, crl, crl, phoE, proB, proA, thrW, ykfN, ykfI, yafW, ykfH, ykfG, yafX, ykfF, ykfB, yafY, ykfL, ykfK, yafZ, ykfA, perR, insN, insI1, insN, ykfC, [insH1] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 240338 | 1 (0.020) | 46 (0.920) | 40/418 | 0.4 | 97.9% | intergenic (‑149/‑5) | yafV/ivy | putative NAD(P)‑binding C‑N hydrolase family amidase/inhibitor of c‑type lysozyme, periplasmic |
| ? | NC_000913 | 273955 = | NA (NA) | noncoding (1195/1195 nt) | IS5 | repeat region | |||||