New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	3390623 =	26 (0.690)	3 (0.080)	3/406	5.2	10.1%	coding (1406/1446 nt)	tldD	putative peptidase
	?	NC_000913	3390643 =	28 (0.770)					coding (1386/1446 nt)	tldD	putative peptidase
Rejected: Position hash score below cutoff.

TCACCTCCGGCAAATTCGTTTTCTCCACTTCAGAAGCATATCTGATTGAAAACGGTAAAGTAACGAAGCCGGTGAAAGGCGCAACGTTGATTGGTTCCGGTATCGAAACCATGCAGCAGATTTCGATGGTTGGCAACGACCTGAAACTGGATAACGGCGTGGGTGTCTGCGGTAAAGAAGGGCAAAGTTTGCCGGTTGGCGTGGGCCAGCCAAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/3390836‑3390623 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccaacCGGCAAACTTTGCCCTTCTTTACCGCAGACACCCACGCCGTTATCCAGTTTCAGGTCGTTGCCAACCATCGAAATCTGCTGCATGGTTTCGATACCGGAACCAATCAACGTTGCGCCTTTCACCGGCTTCGTTACTTTACCGTTTTCAATCAGATATGCTTCTGAAGTGGAGAAAACGAATTTGCCG  >  NC_000913/3390643‑3390829                                                                                                                                                                                                                                                                                                                                                                                                                   TCACCTCCGGCAAATTCGTTTTCTCCACTTCAGAAGCATATCTGATTGAAAACGGTAAAGTAACGAAGCCGGTGAAAGGCGCAACGTTGATTGGTTCCGGTATCGAAACCATGCAGCAGATTTCGATGGTTGGCAACGACCTGAAACTGGATAACGGCGTGGGTGTCTGCGGTAAAGAAGGGCAAAGTTTGCCGGTTGGCGTGGGCCAGC                                                                                                                                                                                                 >  1:32601/1‑210    CCTCCGGCAAATTCGTTTTCTCCACTTCAGAAGCATATCTGATTGAAAACGGTAAAGTAACGAAGCCGGTGAAAGGCGCAACGTTGATTGGTTCCGGTATCGAAACCATGCAGCAGATTTCGATGGTTGGCAACGACCTGAAACTGGATAACGGCGTGGGTGTCTGCGGTAAAGAAGGGCAAAGTTTGCAGGTTGGCGTGGGCCAGCGAA                                                                                                                                                                                              >  2:149165/1‑210                                                                                                                                          ttcagatctgTGGATAACGGCGTGGGGGGCGGCGGTAAAGAAGGGCAAAGTTTGCCGGTTGGCGTGGGCCAGCCAACCGGCAAACTTTGCCCTTCTTTACCGCAGACACCCACGCCGTTATCCAGTTTCAGGTCGTTGCCAACCATCGAAATCTGCTGCATGGTTTCGATACCGGAACCAATCAACGTTGCGCCTTTCACCGGCTTCGTT                                                        <  1:12018/200‑1                                                                                                                                                   CTGGATAACGGCGTGGGTGTCTGCGGTAAAGAAGGGCAAAGTTTGCCGGTTGGCGTGGGCCAGCCAACCGGCAAACTTTGCCCTTCTTTACCGCAGACACCCACGCCGTTATCCAGTTTCAGGTCGTTGCCAACCATCGAAATCTGCTGCATGGTTTCGATACCGGAACCAATACACGTTGCGCCTTTCACCGGCTTCGTcaagttcgaa                                               >  2:12018/1‑200                                                                                                                                                                                                CCGGTTGGCGTGGGCCAGCCAACCGGCAAACTTTGCCCTTCTTTACCGCAGACACCCACGCCGTTATCCAGTTTCAGGTCGTTGCCAACCATCGAAATCTGCTGCATGGTTTCGATACCGGAACCAATCAACGTTGCGCCTTTCACCGGCTTCGTTACTTTACCGTTTTCAATCAGATATGCTTCTGAAGTGGAGAAAACGAATTTGCCG  >  1:325240/1‑210                                                                                                                                                                                                                                                                                                                                                                                                                   TCACCTCCGGCAAATTCGTTTTCTCCACTTCAGAAGCATATCTGATTGAAAACGGTAAAGTAACGAAGCCGGTGAAAGGCGCAACGTTGATTGGTTCCGGTATCGAAACCATGCAGCAGATTTCGATGGTTGGCAACGACCTGAAACTGGATAACGGCGTGGGTGTCTGCGGTAAAGAAGGGCAAAGTTTGCCGGTTGGCGTGGGCCAGCCAAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/3390836‑3390623 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccaacCGGCAAACTTTGCCCTTCTTTACCGCAGACACCCACGCCGTTATCCAGTTTCAGGTCGTTGCCAACCATCGAAATCTGCTGCATGGTTTCGATACCGGAACCAATCAACGTTGCGCCTTTCACCGGCTTCGTTACTTTACCGTTTTCAATCAGATATGCTTCTGAAGTGGAGAAAACGAATTTGCCG  >  NC_000913/3390643‑3390829

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.