| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 2768602 = | 57 (1.180) | 3 (0.060) | 3/404 | 8.2 | 5.1% | intergenic (+29/‑63) | yfjP/yfjQ | CP4‑57 prophage; 50S ribosome‑binding GTPase family protein/CP4‑57 prophage; uncharacterized protein |
| ? | NC_000913 | 2768628 = | 57 (1.220) | intergenic (+55/‑37) | yfjP/yfjQ | CP4‑57 prophage; 50S ribosome‑binding GTPase family protein/CP4‑57 prophage; uncharacterized protein | |||||
| Rejected: Position hash score below cutoff. | |||||||||||
TGTGGGTATATACGTGTAGCGTTCACTGCGGGATTCGTGTTTATCCTCACTGAATACGCTGGGCACCACGCGAAATAACTCTTCACGGGTTAACGGACGGTCACGGCGAATAAGATTTGCAGCGCCAAAGCGCGAAGCCAGACGGGTCATAAGCAGACTCCTCAGTATGGGTAAAACAAATAAAGAAAGCCCTGCCGCACTTGCGACAGGGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/2768814‑2768602‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagggctTTCTTTATTTGTTTTACCCATACTGAGGAGTCTGCTTATGACCCGTCTGGCTTCGCGCTTTGGCGCTGCAAATCTTATTCGCCGTGACCGTCCGTTAACCCGTGAAGAGTTATTTCGCGTGGTGCCCAGCGTATTCAGTGAGGATAAACACGAATCCCGCAGTGAACGCTACACGTATATACCCACAATTTCCCTGCTGGACAGCCTGC > NC_000913/2768628‑2768836 TGTGGGTATATACGTGTAGCGTTCACTGCGGGATTCGTGTTTATCCTCACTGAATACGCTGGGCACCACGCGAAATAACTCTTCACGGGTTAACGGACGGTCACGGCGAATAAGATTTGCAGCGCCAAAGCGCGAAGCCAGACGGGTCATAAGCAGACTCCTCAGTATGGGTAAAACAAATAAAGAAAGCCCTGCCGCACTTGCGACAGG < 1:364077/210‑1 GTGGGTATATACGTGTAGCGTTCACTGCGGGATTCGTGTTTATCCTCACTGAATACGCTGGGCACCACGCGAAATAACTCTTCACGGGTTAACGGACGGTCACGGCGAATAAGATTTGCAGCGCCAAAGCGCGAAGCCAGACGGGTCATAAGCAGACTCCTCAGTATGGGTAAAACAAATAAAGAAAGCCCTGCCGCACTTGCGACAGGG < 1:404856/210‑1 agggttgATACGCGTAGCGTTAACTGCGGGATTCGTGTTTATCCTCACTGAATACGCTGGGCACCACGCGAAATAACTCTTCACGGGTTAACGGACGGTCACGGCGAATAAGATTTGCAGCGCCAAAGCGCGAAGCCAGACGGGTCATAAGCAGACTCCTCGGTATGGGTAAAACAAATAAAGAAAGCCCTGCCGCACTTGCGACAGGGC < 2:588303/203‑1 TGGGTATATACGTGTAGCGTTCACTGCGGGATTCGTGTTTATCCTCACTGAATACGCTGGGCACCACGCGAAATAACTCTTCACGGGTTAACGGACGGTCACGGCGAATAAGATTTGCAGCGCCAAAGCGCGAAGCCAGACGGGTCATAAGCAGACTCCTAAGTATGGGTAAAACAAATAAAGAAAGCCCTGCCGCACTTGCGACAGGGC > 1:532188/1‑210 CCAGACGGGTCATAAGCAGACTCCTCAGTATGGGTAAAACAAATAAAGAAAGCCCTGCCGCACTTGCGACAGGGCTTTCTTTATTTGTTTTACCCATACTGAGGAGTCTGCTTATGACCCGTCTGGCTTCGCGCTTTGGCGCTGCAAATCTTATTCGCCGTGACCGTCCGTTAACCCGTGAAGAGTTATTTCGCGTGGTGCCCAGCGTAT > 1:428643/1‑210 GTCATAAGCAGACTCCTCAGTATGGGTAAAACAAATAAAGAAAGCCCTGCCGCACTTGCGACAGGGCTTTCTTTATTTGTTTTACCCATACTGAGGAGTCTGCTTATGACCCGTCTGGCTTCGCGCTTTGGCGCTGCAAATCTTATTCGCCGTGACCGTCCGTTAACCCGTGAAGAGTTATTTCGCGTGGTGCCCAGCGTATTCAGTGAG < 2:428615/210‑1 GCCCTGCCGCACTTGCGACAGGGCTTTCTTTATTTGTTTTACCCATACTGAGGAGTCTGCTTATGACCCGTCTGGCTTCGCGCTTTGGCGCTGCAAATCTTATTCGCCGTGACCGTCCGTTAACCCGTGAAGAGTTATTTCGCGTGGTGCCCAGCGTATTCAGTGAGGATAAACACGAATCCCGCAGTGAACGCTACACGTATATACCac > 1:389669/1‑208 TTTCTTTATTTGTTTTACCCATACTGAGGAGTCTGCTTATGACCCGTCTGGCTTCGCGCTTTGGCGCTGCAAATCTTATTCGCCGTGACCGTCCGTTAACCCGTGAAGAGTTATTTCGCGTGGTGCCCAGCGTATTCAGTGAGGATAAACACGAATCCCGCAGTGAACGCTACACGTATATACCCACAATTTCCCTGCTGGACAGCCTGC > 2:491380/1‑210 TGTGGGTATATACGTGTAGCGTTCACTGCGGGATTCGTGTTTATCCTCACTGAATACGCTGGGCACCACGCGAAATAACTCTTCACGGGTTAACGGACGGTCACGGCGAATAAGATTTGCAGCGCCAAAGCGCGAAGCCAGACGGGTCATAAGCAGACTCCTCAGTATGGGTAAAACAAATAAAGAAAGCCCTGCCGCACTTGCGACAGGGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/2768814‑2768602‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagggctTTCTTTATTTGTTTTACCCATACTGAGGAGTCTGCTTATGACCCGTCTGGCTTCGCGCTTTGGCGCTGCAAATCTTATTCGCCGTGACCGTCCGTTAACCCGTGAAGAGTTATTTCGCGTGGTGCCCAGCGTATTCAGTGAGGATAAACACGAATCCCGCAGTGAACGCTACACGTATATACCCACAATTTCCCTGCTGGACAGCCTGC > NC_000913/2768628‑2768836 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |