Read alignment evidence...
	seq id	position		change	freq	score	reads	annotation	genes	product
*	NC_000913	3,425,035	0	T→A	100.0%	‑0.5	1	noncoding (1749/2904 nt)	rrlD	23S ribosomal RNA of rrnD operon
Rejected: E-value exceeds prediction threshold.
Reads supporting (aligned to +/- strand):  new base (0/0):  ref base (1/0):  total (1/0)

TTCGACTGATTTCAGCTCCACGAGCAAGTCGCTTCACCTACATATCAGCGTGCCTTCTCCCGAAGTTACGGCACCATTTTGCCTAGTTCCTTCACCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTACCTGACCACCTGTGTCGGTTTGGGGTACGATTTGATGTTACCTGATGCTTAGAGGCTTTTCCTGGAAGCAGGGCATTTGTTGC  >  NC_000913/3425029‑3425238       |                                                                                                                                                                                                            ctCGACTGCTTTCCGCTCCACGCGCAAGTCGCTTCACCTACATATCAGCGTGCCTCCTCCCGAAGTTCCGGCACCACTTTGCCTAGTGCCTTCACCCGAGTCCTTCCAAGCTCCTCGGCATTCTCCACCTGCCCACCTGTGCCCTGTCTGGGTCCGATAGGATGGATCGTGATGCGCAGAGGCCTTCCATGGCCTCAGGTCATTTGTAGc  >  2:310740/2‑210 (MQ=0)       |                                                                                                                                                                                                            TTCGACTGATTTCAGCTCCACGAGCAAGTCGCTTCACCTACATATCAGCGTGCCTTCTCCCGAAGTTACGGCACCATTTTGCCTAGTTCCTTCACCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTACCTGACCACCTGTGTCGGTTTGGGGTACGATTTGATGTTACCTGATGCTTAGAGGCTTTTCCTGGAAGCAGGGCATTTGTTGC  >  NC_000913/3425029‑3425238

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.