BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	DH1	= 2668875	276 (0.790)	89 (0.280)	76/268	9.0	27.9%	pseudogene (20/345 nt)	pinE	hypothetical protein
*	?	DH1	= 2670672	214 (0.680)	89 (0.280)	76/268	9.0	27.9%	coding (306/789 nt)	stfP	integrase
Rejected: Coverage evenness skew score above cutoff.

Only 100 of 283 total aligned reads displayed.

TCAGCGCATTACGTTGTAGATCTGTGTTCTGGTCATTTGTTGATACGCGTACATAGCCAATAAGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATG‑CCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATGGAAATACAGT  >  DH1/2668727‑2669025

tCAGCGCATTACGTTGTAGATCTGTGTTCTGGTCATTTGTTGATACGCGTACATAGCCAATAAGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATG‑CCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAggct                                                                                                                                                      >  8:555081/1‑149 (MQ=255)

  aGCGCATTACGTTGTAGATCTGTGTTCTGGTCATTTGTTGATACGCGTACATAGCCAATAAGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATG‑CCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAggctct                                                                                                                                                    <  2:10408/151‑5 (MQ=255)

  aGCGCATTACGTTGTAGATCTGTGTTCTGGTCATTTGTTGATACGCGTACATAGCCAATAAGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATG‑CCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCa                                                                                                                                                    <  2:779694/151‑1 (MQ=255)

    cgcATTACGTTGTAGATCTGTGTTCTGGTCATTTGTTGATACGCGTACATAGCCAATAAGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATG‑CCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCaaa                                                                                                                                                  <  3:588220/151‑1 (MQ=255)

     gcATTACGTTGTAGATCTGTGTTCTGGTCATTTGTTGATACGCGTACATAGCCAATAAGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATG‑CCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGGaaa                                                                                                                                                  >  8:248993/1‑150 (MQ=255)

     gcATTACGTTGTAGATCTGTGTTCTGGTCATTTGTTGATACGCGTACATAGCCAATAAGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATG‑CCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCaaa                                                                                                                                                  >  3:651598/1‑150 (MQ=255)

       aTTACGTTGTAGATCTGTGTTCTGGTCATTTGTTGATACGCGTACATAGCCAATAAGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATG‑CCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACt                                                                                                                                               >  1:1110631/1‑151 (MQ=255)

            gTTGTAGATCTGTGTTCTGGTCATTTGTTGATACGCGTACATAGCCAATAAGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATG‑CCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAggctctgcattacctg                                                                                                                                          <  7:79791/151‑15 (MQ=255)

            gTTGTAGATCTGTGTTCTGGTCATTTGTTGATACGCGTACATAGCCAATAAGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATG‑CCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAggctctgcattacctg                                                                                                                                          <  3:45546/151‑15 (MQ=255)

            gTTGTAGATCTGTGTTCTGGTCATTTGTTGATACGCGTACATAGCCAATAAGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATG‑CCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATg                                                                                                                                          >  7:912212/1‑151 (MQ=255)

             ttGTAGATCTGTGTTCTGGTCATTTGTTGATACGCGTACATAGCCAATAAGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATG‑CCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAggctctgcattacctgt                                                                                                                                         >  5:1168880/1‑136 (MQ=255)

             ttGTAGATCTGTGTTCTGGTCATTTGTTGATACGCGTACATAGCCAATAAGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATG‑CCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATgc                                                                                                                                         >  1:761313/1‑151 (MQ=255)

              tGTAGATCTGTGTTCTGGTCATTTGTTGATACGCGTACATAGCCAATAAGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATG‑CCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATgc                                                                                                                                         >  8:423820/1‑150 (MQ=255)

                 aGATCTGTGTTCTGGTCATTTGTTGATACGCGTACATAGCCAATAAGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATG‑CCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATgcagc                                                                                                                                      >  7:169066/1‑150 (MQ=255)

                   aTCTGTGTTCTGGTCATTTGTTGATACGCGTACATAGCCAATAAGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATG‑CCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAAc                                                                                                                                   >  6:110492/1‑151 (MQ=255)

                       gtgtTCTGGTCATTTGTTGATACGCGTACATAGCCAATAAGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATG‑CCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCt                                                                                                                               <  7:390340/151‑1 (MQ=255)

                       gtgaTCTGGTCATTTGTTGATACGCGTACATAGCCAATAAGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATG‑CCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACg                                                                                                                                  <  1:968146/148‑1 (MQ=255)

                         gtTCTGGTCATTTGTTGATACGCGTACATAGCCAATAAGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATG‑CCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTa                                                                                                                              <  5:1004804/150‑1 (MQ=255)

                           tCTGGTCATTTGTTGATACGCGTACATAGCCAATAAGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATG‑CCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACa                                                                                                                            <  8:1347789/150‑1 (MQ=255)

                             tGGTCATTTGTTGATACGCGTACATAGCCAATAAGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATG‑CCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACAtt                                                                                                                          >  4:1124284/1‑150 (MQ=255)

                              ggTCATTTGTTGATACGCGTACATAGCCAATAAGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATG‑CCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTa                                                                                                                         <  4:93614/150‑1 (MQ=255)

                               gTCATTTGTTGATACGCGTACATAGCCAATAAGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATG‑CCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAgg                                                                                                                       >  4:1031157/1‑151 (MQ=255)

                                tCATTTGTTGATACGCGTACATAGCCAATAAGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATG‑CCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAgg                                                                                                                       >  4:432069/1‑150 (MQ=255)

                                  aTTTGTTGATACGCGTACATAGCCAATAAGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATG‑CCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACg                                                                                                                    >  8:737218/1‑151 (MQ=255)

                                  aTTTGTTGATACGCGTACATAGCCAATAAGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATG‑CCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACACAATGCAGCAACGGCTACATTAGGACg                                                                                                                    <  6:1020919/151‑1 (MQ=255)

                                    ttgttgATACGCGTACATAGCCAATAAGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATG‑CCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGc                                                                                                                   >  4:1347486/1‑150 (MQ=255)

                                    ttgttgATACGCGTACATAGCCAATAAGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATG‑CCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGc                                                                                                                   >  3:18619/1‑150 (MQ=255)

                                           tACGCGTACATAGCCAATAAGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATG‑CCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGttt                                                                                                           >  5:344337/1‑151 (MQ=255)

                                            aCGCGTACATAGCCAATAAGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATG‑CCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTc                                                                                                          <  4:303592/151‑1 (MQ=255)

                                            aCGAGTACATAGCCAATAAGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATG‑CGATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCAGCGGttt                                                                                                           <  8:980627/150‑1 (MQ=255)

                                               cgTAGATAGCCAATAAGCATGTTAAAT‑CCCCTGGTAAAAGCAGGAATGATG‑CCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAg                                                                                                      <  8:475339/151‑1 (MQ=255)

                                                gTACATAGCCAATAAGCATGTTAAATCCGCCTGGTAAAAGCAGGAATGATG‑CCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGTGATAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAg                                                                                                      <  7:200990/151‑1 (MQ=255)

                                                gTACATAGCCAATAAGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATG‑CCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAg                                                                                                      <  1:731976/151‑1 (MQ=255)

                                                gTACATAGCCAATAAGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATG‑CCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAg                                                                                                      <  7:612537/151‑1 (MQ=255)

                                                 tACATAGCCAATAAGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATG‑CCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGc                                                                                                     >  3:1227927/1‑151 (MQ=255)

                                                    aTAGCCAATAAGCATGTTAAATCCCCCTGCTAAAAGCAGGAATGATG‑CCATTTGCTTCTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCtat                                                                                                  <  6:683457/151‑1 (MQ=255)

                                                      aGCCAATAAGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATG‑CCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCtata                                                                                                 <  2:1235756/150‑1 (MQ=255)

                                                      aGCCAATAAGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATG‑CCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCtata                                                                                                 <  2:75780/150‑1 (MQ=255)

                                                       gCCAATAAGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATG‑CCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATAcc                                                                                               >  2:464682/1‑151 (MQ=255)

                                                          aaTAAGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATG‑CCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGATATACCGGt                                                                                            >  8:29398/1‑151 (MQ=255)

                                                           aTAAGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATG‑CCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGtt                                                                                           <  6:1238287/151‑1 (MQ=255)

                                                           aTAAGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATG‑CCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGtt                                                                                           <  1:894883/151‑1 (MQ=255)

                                                               gCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATG‑CCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGa                                                                                       <  3:1341338/151‑1 (MQ=255)

                                                               gCATGTTAAATCCCCCTGGTAAAAGCACCAATCAAC‑CCATTTGCTTCTTATTACTACAATATCATAAACGTTGGTTTGGGAGAAGCACCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTATCATAGCTATACCCGTTa                                                                                          >  6:949417/1‑148 (MQ=255)

                                                                  tGTTAAATCCCCCTGGTAAAAGCAGGAATGATG‑CCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATtg                                                                                    >  2:841996/1‑151 (MQ=255)

                                                                   gTTAAATCCCCCTGGTAAAAGCAGGAATGATG‑CCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATtg                                                                                    <  6:168231/150‑1 (MQ=255)

                                                                     tAAATCCCCCTGGTAAAAGCAGGAATGATG‑CCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATtggt                                                                                  <  8:714977/150‑1 (MQ=255)

                                                                      aaaTCCCCCTGGTAAAAGCAGGAATGATG‑CCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATtggtg                                                                                 <  1:1238280/150‑1 (MQ=255)

                                                                            cccGGGTAAAAGCAGGCATTATGCCCATTTG‑GTGTTTTTTATTGATTTTGATAAAAGTTGGTTTTGGGGAAGGAGCAAAACAAAATGCAGCAACGGCGAAAATAGGACGCACCGGTTTCATAGCTATACCGGGTATTATTTGTGGtttttt                                                                          >  4:668033/1‑149 (MQ=255)

                                                                             ccTGGTAAAAGCAGGAATGATG‑CCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAg                                                                         <  2:552116/151‑1 (MQ=255)

                                                                                   aaaaGCAGGAATCATG‑CCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAATGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTATCATAGCTATACCCCTTATCATGGGGGGTATTGGGCAATc                                                                    >  6:983605/1‑150 (MQ=255)

                                                                                      aGCAGGAATGATG‑CCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGt                                                                 >  4:1263136/1‑150 (MQ=255)

                                                                                          ggAATGATG‑CCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCa                                                            <  3:793034/151‑1 (MQ=255)

                                                                                          ggAATGATG‑CCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCa                                                            <  6:551138/151‑1 (MQ=255)

                                                                                           gAATGATG‑CCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCAt                                                           <  4:1086608/151‑1 (MQ=255)

                                                                                             atgatg‑CCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTc                                                         >  8:815150/1‑151 (MQ=255)

                                                                                               gatg‑CCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAg                                                       <  7:1110442/151‑1 (MQ=255)

                                                                                                atg‑CCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGt                                                      >  1:1307425/1‑151 (MQ=255)

                                                                                                 tg‑CCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTg                                                     >  8:1199727/1‑151 (MQ=255)

                                                                                                    ccATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTggg                                                   <  7:665020/151‑1 (MQ=255)

                                                                                                     cATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTgggg                                                  >  8:1150408/1‑151 (MQ=255)

                                                                                                     cATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTgggg                                                  >  7:257813/1‑151 (MQ=255)

                                                                                                     cATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGATATGATTGGTCGTATTGAGCAATCAGTAATCATTCAGTgggg                                                  >  6:1314339/1‑151 (MQ=255)

                                                                                                        ttGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGt                                                <  3:572724/150‑1 (MQ=255)

                                                                                                         tGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTgg                                              >  4:132140/1‑151 (MQ=255)

                                                                                                         tGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTgg                                              >  5:631491/1‑151 (MQ=255)

                                                                                                          gCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGa                                             <  6:380878/151‑1 (MQ=255)

                                                                                                            ttGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCTATCAGTAATCATTCAGTGGGGGTgcatt                                           >  1:614173/1‑147 (MQ=255)

                                                                                                              gTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATg                                          <  5:248466/150‑1 (MQ=255)

                                                                                                               ttATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGcc                                        >  5:163654/1‑151 (MQ=255)

                                                                                                                tATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCg                                       >  2:939454/1‑151 (MQ=255)

                                                                                                                 aTTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGc                                      >  1:166765/1‑151 (MQ=255)

                                                                                                                 aTTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAAGCATTCAGTGGGGGTGGAATGCCGc                                      >  1:857616/1‑151 (MQ=255)

                                                                                                                  tttCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGc                                      >  1:258972/1‑150 (MQ=255)

                                                                                                                    tcttcATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCaa                                    <  3:1050534/150‑1 (MQ=255)

                                                                                                                      ttcATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCaaa                                   >  7:759216/1‑149 (MQ=255)

                                                                                                                       tcATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGc                                >  7:355629/1‑151 (MQ=255)

                                                                                                                       cggctctcgaaaaCCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGc                                <  6:1080393/141‑1 (MQ=255)

                                                                                                                        cATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGc                                >  8:750142/1‑150 (MQ=255)

                                                                                                                         gctctcgaaaaCCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCAt                              <  1:1038450/143‑1 (MQ=255)

                                                                                                                          ttttCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATc                             >  1:335197/1‑151 (MQ=255)

                                                                                                                           tttCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCt                            >  8:920860/1‑151 (MQ=255)

                                                                                                                           tctcgaaaaCCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCAACATTAGGACGCACCGGTTTCATAGCTATACCCGTTATGATTGGTGGGATTGAGCAATCAGTAATCATTCAGAGGGGGAGGAATTCAGCAAAAGCATCt                            >  4:965143/7‑151 (MQ=255)

                                                                                                                            ttCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCt                            <  4:344247/150‑1 (MQ=255)

                                                                                                                             tCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGc                          >  4:681378/1‑151 (MQ=255)

                                                                                                                              cATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGcc                         >  7:1339898/1‑151 (MQ=255)

                                                                                                                               aTAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCct                        >  1:151235/1‑151 (MQ=255)

                                                                                                                                tAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCctc                       >  2:1330398/1‑151 (MQ=255)

                                                                                                                                 aaaCGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCctct                      >  2:200478/1‑151 (MQ=255)

                                                                                                                                    cGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTggg                   >  7:535515/1‑151 (MQ=255)

                                                                                                                                    cGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATAATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTggg                   <  8:861840/151‑1 (MQ=255)

                                                                                                                                       tGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTggggg                 <  4:780626/150‑1 (MQ=255)

                                                                                                                                         gTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTgggg                  <  5:546625/147‑1 (MQ=255)

                                                                                                                                            tGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACAGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCAGCAAAAGCATCTGCGTCTGGGGGGGATgg           >  1:571663/1‑151 (MQ=255)

                                                                                                                                             gggAGAAGGAGCAAAACTCATTGCAGCAACGGCTACTTTAGGACGCACGGGTTTCATAGCTATTCGGGTTATGATTGGTGGTATTGAGAAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATgg           <  5:1096710/150‑1 (MQ=255)

                                                                                                                                             gggAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATgg           >  5:469996/1‑150 (MQ=255)

                                                                                                                                             gggAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATGGa          <  4:159988/151‑1 (MQ=255)

                                                                                                                                                  aaGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATGGAAATAc     >  2:1290902/1‑151 (MQ=255)

                                                                                                                                                   aGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATGGAAATAc     >  3:412959/1‑150 (MQ=255)

                                                                                                                                                    ggAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATGGAAATAc     >  3:1162741/1‑149 (MQ=255)

TCAGCGCATTACGTTGTAGATCTGTGTTCTGGTCATTTGTTGATACGCGTACATAGCCAATAAGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATG‑CCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATGGAAATACAGT  >  DH1/2668727‑2669025

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.