Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*DH12,169,5480GT27.4% 330.2 / 61.4 198P671Q (CCG→CAG) rsxCelectron transporter RsxC
Reads supporting (aligned to +/- strand):  ref base G (35/108);  new base T (13/41);  total (49/149)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 201 total aligned reads displayed.

GCGGCAACTGCCGCTTTGCGCGGATCAACCTGTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCTTCGACGGCG  >  DH1/2169398‑2169697
                                                                                                                                                      |                                                                                                                                                     
gcgGCAACTGCCGCTTTGCGCTGATCAACCTGTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCg                                                                                                                                                       <  5:631880/151‑1 (MQ=255)
gcgGCAACCGCCGCTTTGCGCGGATCAACCTGTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCg                                                                                                                                                       <  7:1353957/151‑1 (MQ=255)
 gggCAACTGCCGCTTTGCGCGGATCAACCTGTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCGTGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCgg                                                                                                                                                      <  2:850967/150‑1 (MQ=255)
    cAACTGCCGCTATGCGCGGATCAACCTGTTCTTCTGGTACCGCATTAGCCTGGTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTg                                                                                                                                                   <  5:1063657/151‑1 (MQ=255)
      aCTGCCGCTTTGCGCGGATCAACCTGTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGACGGGTCGACGGCAGCGTTCAGCGGATCAGACTGTAGTTGTCGGTCCGGATTAGCGGGTTGcg                                                                                                                                                 >  3:1252813/1‑150 (MQ=17)
        tGCCGCTTTGCGCGGATCAACCTGTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGAGATCTTAGGCGCGTACAATAGACCATAAGACGCCAGCTTTGCGCGGATAAACCGTTTCTTCTGGCTAAGAAATAGCCGGTTGCTGt                                                                                                                                               >  7:204396/1‑151 (MQ=17)
        tGCCGCTTTGCGCGGATCAACCTGTTCTTCTGGTACCGCATTAGCCTATATCTGATCAACCTAGAGTTCTTTAACACGTGCAATAGCCGCTTAGACCGCGGATTTGCGCGGATCAAAATCATATTCTGGATCCGCATTAGCCGGGTGCGGt                                                                                                                                               >  8:144789/1‑151 (MQ=12)
         gCCGCTTTGCGCGGATCAACCTGTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTg                                                                                                                                                <  6:59331/149‑1 (MQ=255)
           ggcgttgcggttaTCAACGTGTTCTTCTGGTACGGCATTATCCTGTTGCTGGTCGAGCTTGCTTGCTTTGGCGCGTGCAATAGCCGCTTCGACTGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTcc                                                                                                                                            <  4:16210/139‑1 (MQ=25)
               ttGCGCGGATCAACCTGTTCTTCTGGTTCCTCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCg                                                                                                                                          <  3:909879/149‑1 (MQ=255)
                tGCGCGGAGCAACCTGTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGtt                                                                                                                                        <  1:329985/150‑1 (MQ=255)
                   gcgGAGCAACCTGTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTGCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTgcg                                                                                                                                    <  7:1081144/151‑1 (MQ=255)
                      gATCAACCTGTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCCGCTTTGCGCGACACAGCAAGTGCATCTGGCTCCGCTGAAGACGGTAGATGGTCGCGCGTgcgcgc                                                                                                                                 >  1:67104/1‑151 (MQ=14)
                         cAACCTGGTCTTCTGGTTCCGCATTAGCCTGTTGCTGGTCCAGCTTGCGGGCTTTGGCGCGGGCAATAGCCGCTGCGACGGCAGCTTTGCGCGGATCAACCTATTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCttt                                                                                                                              <  4:103657/151‑1 (MQ=14)
                          aaCCTGTTCTTCTGGTACGGCATTAGCCTGTTGCTGTTCCAGGTTGCGTGCGTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTg                                                                                                                             <  4:363692/151‑1 (MQ=255)
                          aaCCTGTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTg                                                                                                                             <  1:592845/151‑1 (MQ=255)
                          aaCCTGTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTACGCGCTTTg                                                                                                                             <  8:578785/151‑1 (MQ=255)
                          aaCCTGTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGGGCAATAGCAGCTGCGAAGCCCGCGTTGGTCGGATCGACATGGTGTTCTGGCTGAGCATTAGCGGGTGGCGGTTGCAGTTTGAGATCTTTg                                                                                                                             >  8:617732/1‑151 (MQ=2)
                           aCCTGTTCTTCTTGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTgg                                                                                                                            <  2:348302/151‑1 (MQ=255)
                               gctcttctGGTACCGCATTAGCCTGGTGCTGTTCCAGCTTGCGGGCGTTGGCGCGTGCAATAGCCGCGTCGACTGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTc                                                                                                                         <  5:1231640/148‑1 (MQ=25)
                               gTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCg                                                                                                                        <  5:865492/151‑1 (MQ=255)
                               gTTCTTCTGGTACCGCATTAGCCTGGTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCt                                                                                                                          <  7:501140/149‑1 (MQ=255)
                                ttcttcTGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTACATAGGAACCTCCAATAGCAGCTTATACGTCTGCTTTGCGCGGATCAACCTGTTGTTCTGCCTAAGCATTAAAATATTGCTGTTCCCGGTTGCGGGGTTGGGCTggg                                                                                                                       >  8:545736/1‑151 (MQ=2)
                                 tcttctGGCACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCgg                                                                                                                       <  6:336499/150‑1 (MQ=255)
                                       ggttcgtgtttAGCCTGTTGCTGTGCGCGGTTGCGTGCTTGTGCGCGTGCAATAGCCGCTTCTACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAg                                                                                                                <  4:947602/142‑1 (MQ=21)
                                         gtcctcATTAGCCTGTTGCTGGTCCAGGTTTCGTGCTTTGGCGCGTGCAATAGCCGCTTCTACTGCAGCTTTGCGCGTATCAACCTGGTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCg                                                                                                              <  3:58228/146‑1 (MQ=255)
                                          acctgaTTAGCCTGTTGCTGTTCCTGCTTGTGTGCTTTTGGGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGGTCCGCATTAGCGGGTTGGTGTTCCCGTTTGCGGGCTTTGGCTCGGGCAATAGCg                                                                                                              <  4:998866/145‑1 (MQ=25)
                                           cgtctttAGCCTTTTGCTGTTCGTCTTTGCTTGCTTTAGCGCGTGCAATAGCCGCTGCTACTGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCTGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCgg                                                                                                             <  8:1349797/145‑1 (MQ=17)
                                             gCATTAGCCTGCTGCTGGTCCAGCTTGCGTGCGTTGGCGCGTGCAATAGCCGCTGCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCtt                                                                                                          <  2:136720/151‑1 (MQ=255)
                                              cATTAGCCTGTTGCTGGTCGTGCTTGCGTGCGTTTGCGCGTGCAATAGCCGCTTCTACTGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTc                                                                                                         <  2:362839/151‑1 (MQ=21)
                                               aTTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACATCGGATTAGCGACGATCAACGTGATCTTCTGGATCCGAATTAGCCTGTTGCTGTTCCCGGTTGCGTTATATGGAAAGGGCAATAGCGGCTTCg                                                                                                        >  4:462834/1‑151 (MQ=2)
                                               aTTAGCCTGTTGCTGTGCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCg                                                                                                        <  5:1168978/151‑1 (MQ=255)
                                                  aGCCTGTTGCTGTTCGAGCTTGCGTGCGTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGAc                                                                                                      <  5:511754/150‑1 (MQ=255)
                                                  aGCCTGTTGCTGTTCCCGCTTGCGGGCGTTCGCGCGTGCAATAGCCGCTGCGACTGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGAcg                                                                                                     <  7:1035801/151‑1 (MQ=17)
                                                  aGCCTGGTGCTGTTCGAGGTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGAc                                                                                                      <  1:1230812/150‑1 (MQ=255)
                                                  aGCCTGCTGCTGTTCCAGCTTGCGTGCGTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGAc                                                                                                      <  4:107560/150‑1 (MQ=255)
                                                   gCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCGGCTTCGACGGCAGCTTTGCGGGGATCAACCTGTTGTTCTGGGTCCGCATTTGCCTGTTGGTGTTCCAGTTTGCGCGGTGTGGCTCGGGCCGTATCTGCTTcagagc                                                                                                    >  7:902057/1‑146 (MQ=11)
                                                   gCCTGTTGCTGTTCCAGCGTGCGTGCTTTCGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGAcgg                                                                                                    <  8:978026/151‑1 (MQ=255)
                                                   cccTGGTGCTGGGCCCGCTTGCGGGCCTTGGCGCGTGCAATAGCCGCGGCCACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGAcgg                                                                                                    <  2:323170/150‑1 (MQ=17)
                                                      tGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCTTCGACGGCGGGTTTCCGCGGATCGCCCTGTTGTTCTGGTTCGGGATTATCCTGTTGGTGGTCAAGCTTGCGCGGGTGGGCTCCGGGCAGCCCGGCTTCGCcggg                                                                                                   >  5:211351/1‑148 (MQ=0)
                                                       gctGCTGTTCCAGCTTGCGGGCGTGGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGAcggcg                                                                                                  <  2:247081/147‑1 (MQ=255)
                                                       gatGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGAcggcg                                                                                                  <  5:1355825/147‑1 (MQ=255)
                                                          gCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCATCTTTACGCGGAACTAGATGTTATTCTTGGTAGGCAGTAGCGAGTTGAAGTTCCAGGTTGAGAGCTTTGGAAAGGGCAATAGCGGCTTCGACgggggcggt                                                                                             >  6:425187/1‑148 (MQ=2)
                                                          gCTGTGCCAGCTTGCGGGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCtt                                                                                              <  3:1264207/150‑1 (MQ=255)
                                                          gCTGGTCCTGCTTGCTTGCTTGCGCGCGGGCAATAGCCGCGTCTACTGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCACCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGTGCAATAGCGGCTTCGACGGCGGCttt                                                                                             <  6:935511/151‑1 (MQ=14)
                                                          gCTGGTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCttt                                                                                             <  7:398966/151‑1 (MQ=255)
                                                          gCTGGTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCttt                                                                                             <  5:1305950/151‑1 (MQ=255)
                                                             gttcgtgttttcttGCTTTGGCGCGTGCAATAGCCGCGGCTACTGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTg                                                                                            <  2:614505/136‑1 (MQ=17)
                                                             ggtCCAGCTTGCGTGCGTGCGCGCGGGCAATAGCCGCGTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTgcg                                                                                          <  1:957447/149‑1 (MQ=17)
                                                             gTTCGAGCTTGCTTGCGTTGGCGCGGGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTgcg                                                                                          <  1:101898/151‑1 (MQ=255)
                                                             gTTCCAGCTTGCGGGCGTGCGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTgc                                                                                           <  5:154146/150‑1 (MQ=255)
                                                               gcgtgCTTGAGGGCGTTCGCGCGTGCAATAGCCGCTGCTACTGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCTGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTgcgc                                                                                         <  4:1278193/146‑1 (MQ=17)
                                                                 cAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCGAACTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCAGATTGAGAGCTTTGGCACGGGCAATAGCGGCTTGGTCggcggcggggcggggt                                                                                      >  4:505456/1‑141 (MQ=11)
                                                                 cAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGa                                                                                      <  4:449858/151‑1 (MQ=255)
                                                                 cAGCTTGCGTGCTTTGGCGCGTGCAATAGACGCTTCGACGGCTGCTTTGCGCGGATCACCCTGGTCTTCTTGATCCGCATTAGCCTGTTGCTGTTCCAGGTTGCGCGCTGTGGCGCGGGGATGGGCGGCGGCGACGGCGGCTGTgcgggcc                                                                                      >  1:1299104/1‑147 (MQ=2)
                                                                   gtttgcttgcTTTTGCGCGTGCAATAGCCGCTTCTACTGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGAt                                                                                     <  2:565666/148‑1 (MQ=255)
                                                                   gCTTGATTGCTTTTGCGCGTGCAATAGCCGCTTCTACTGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCTGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATc                                                                                    <  2:1099192/151‑1 (MQ=17)
                                                                         gggccttcgcgcGTGCAATAGCCGCGGCAACTGCCGCGTTGCGCCGATCCACCTGTTCTTCTGGCTCCGCATTAGCCTGTTGCTGTTCCCGTTTGCGCGCTTTGGCGCGGGCAATAGCGGCTTCTACGGCGGCTTTGCGCGGATCGACCtg                                                                              <  2:733380/143‑1 (MQ=11)
                                                                         gggCTTTGGCGCGTGCAATAGCCGCGTCTACTGCCGCGTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCTGTTGCTGTTCCCGGTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCtg                                                                              <  4:1354/149‑1 (MQ=14)
                                                                          ggccgtGGCGCGTGCAATAGCCGCGGCCACGGCCGCGTTGCGCGGATCCACCTGGTCTTCGGGCTCCGCATTAGCCGGGTGCTGGGCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCtgt                                                                             <  3:1001095/146‑1 (MQ=17)
                                                                            cgttGGCGCGTGCAATAGCCGCGTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTTGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCGCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCtgttg                                                                           <  1:227117/149‑1 (MQ=255)
                                                                             tttGGCGTGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGATCCGCATTAGACGGTTGATGTTCCAGATTGCGAGCTTTGGCACGTGCAATAGCTGCTTCGACGGCAGGTTTGCGGGGGTAGAGCtgtggt                                                                          >  8:164831/1‑151 (MQ=14)
                                                                             gtgcgcgaggtcAATAGCCGCTTACACTGTTTCTTTGCGCGTATCTATTTGTTTTTCTGGCTCGGTATTATCCTTTTGCTGGTCGTGTTTTCGTGCTTTTGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCtgttct                                                                          <  8:1133619/140‑3 (MQ=2)
                                                                               gtgcgcGGGCAATAGCCGCTGCCACTGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCGCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTgttgtt                                                                         <  8:480395/148‑1 (MQ=14)
                                                                                ggCGCGTGCAATAGCCTGTTCTACGGCAGCTTTGCGATGATCAACCTGCTCTTATGGCTCGGCATTAGCCTGGTGCTGTTCGGGTTTGCTCGCTTTGGCGCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCt                                                                       <  1:1073599/151‑1 (MQ=14)
                                                                                cgcgcGGGCAATAGCCGCGTCGACTGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCGCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTc                                                                        <  3:1140337/149‑1 (MQ=255)
                                                                                 gcgcGGGCAATAGCCGGGTCCACTGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCGTCATTAGCCTGTTGCTGTTCGCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTg                                                                      <  4:344215/151‑1 (MQ=14)
                                                                                     gTGCAATAGCCGCTTCTACTGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCTGTTGCTGTTCCCGTTTGCGCGCTTTGGCGCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTc                                                                  <  8:1040970/151‑1 (MQ=255)
                                                                                      tGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCg                                                                 >  7:78423/1‑151 (MQ=255)
                                                                                       gCAATAGCCGCGGCCACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCACCGCATTAGCCGGTTGCTGTTCCCGCTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCgg                                                                <  3:832265/151‑1 (MQ=255)
                                                                                         aaTAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTGCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCa                                                              <  7:756903/151‑1 (MQ=255)
                                                                                          aTAGCCGCTTCGACGGCAGCTTTGCGCGGATCACCCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCGCGGGCTATAGCGGCTTAGACGGCGGGTTTGCGGGGATCGGCCTTGTGTTGTGGCTCGGc                                                               >  7:1192781/1‑149 (MQ=255)
                                                                                            aGCCGCTTCTACTGCAGCTTTGCGCAGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGGTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCAtt                                                            <  3:191753/150‑1 (MQ=255)
                                                                                             cgcGCTTCCGCGCCCGCCTTGCGCGGATCGACTTGTTTTTATTGATCCGCATTAGCCTGTTTGTTTTCCAGGTTTAGCGCTTTTTTACGTTCAATAGGGGCTTCGTCGGTTGCTTTGCGCGGATCGACCTGTTGTTCTGGTTCCGCATTAg                                                          <  8:121026/149‑1 (MQ=2)
                                                                                                gCTTCTACTGCAGCTTTGCGCGGATAAACCTGTTCTTCTGGCTCCGCATTATCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCt                                                       <  8:723565/151‑1 (MQ=255)
                                                                                                  ttCGACGGCAGCTCTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCAGATTGCGCGCTTTGGGGCGGGCATTAGAGGATTCCACGGCCGAAAAGAGAGTATCGACCGGTTGTGCTGGTTCGGGATTAGCATGt                                                     >  7:748454/1‑151 (MQ=12)
                                                                                                        ggCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCTGTTGCTGTTCCAGGTTGCGCGCTTTGGCGCGGGc                                                                                                                     >  7:1303517/1‑81 (MQ=11)
                                                                                                         gCAGCTTTGCGCGGATCAACCTGGTCTTCTGGCTCCGCATTAGCCTGGTGCTGTGCCCGTTTGCGGGCTTTGGCGCGGGCAATAGCGGCTTCGACTGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGtt                                              <  3:763693/151‑1 (MQ=14)
                                                                                                         gCAGCTTTGCGCGGAGCAACCTGTTCTTCTGGCTCCGCATGAGCCGGTTGCTGGTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGtt                                              <  3:441704/151‑1 (MQ=255)
                                                                                                            gggttGCGCGGATCAAGCTGTTCTTCTGGCTCCGCTATAGCCTGTTGCTGTTCCCGTTTGCGGGCGTTTGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCa                                           <  3:433656/148‑1 (MQ=14)
                                                                                                            gatttGCGCGGATCTACGTGGTCTTCTTGCTCGGCATTATCCTTTTGCTGTTCGGGTTTTCTGGCGTGCGCGCGGGCAATAGCCGCTTCTACTGCGGCTTTGCGCGGATCTACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCa                                           <  8:900875/149‑1 (MQ=2)
                                                                                                             cccagagctcctccaCCTGTTCTTCTTGATCTGTATTAGCCGGTGGGTGCACCGGCATGCCCCCTGTGGCTGCGCCTATAGCGGCTCAGACGGCTGTTTCGCGCGGATCTACCTGTTGTTCTGGCTCCGCATTAGCCTGTTGCTGTTCCAg                                          <  6:183085/137‑1 (MQ=2)
                                                                                                              tttGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCttt                                                                                             >  2:292031/1‑99 (MQ=255)
                                                                                                               ttGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGATTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCTACGGCAGATTTACGAGGATCAACATCTTTTTCTGCCTCGTAATTATCCTGATGATCTTcc                                            >  4:440982/1‑147 (MQ=14)
                                                                                                               gtgggcgGAGCAACGTGCTCTTCTGGCTCCGCATTAGCCTGTTGCTGGTCGCCTTTGCGCGCTTTGGCGCGGGCAATAGCGGCTTCCACTGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAg                                          <  3:258202/145‑1 (MQ=14)
                                                                                                                  ggcgGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGGTGCTGTTCCCGTTTGCGCGCTTTCGCGCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGc                                     <  7:155528/150‑1 (MQ=255)
                                                                                                                  cgcgGATGTACCTGCTCTTCTGGCTCGGGTTTAGCCTTCTGCTGGTCGCGTTTTCGGGCTTTTGCGCGGGCAATAGCGGCTGCTACGGCGGCTTTGCGCGGATCTACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTg                                      <  8:201805/150‑1 (MQ=14)
                                                                                                                    cgGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCGCGGGCGATAGCTGCTTCAAcggcagtt                                                                                               >  1:1247015/1‑87 (MQ=11)
                                                                                                                     ggaggacgcTGTTCTTCTCGCTCGTTTTGAGCCGTGTGCTGTGCGGGTTTTCTGGCTTTTGCGCGGGCAATAGGGGCTGCTACTGCCGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTg                                  <  6:1168682/143‑1 (MQ=2)
                                                                                                                        gccagcTGTTCGGCTGGCTCCGCATGAGCCGGGTGCTGGGCCCGTTTTCTGGCCTTCGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCTACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCtt                               <  5:337571/146‑1 (MQ=17)
                                                                                                                               gTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGAc                                                                                                      >  4:695967/1‑73 (MQ=255)
                                                                                                                               gTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCGCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCAc                         <  7:1225471/150‑1 (MQ=255)
                                                                                                                                    gccgggaccGCATTAGACGCGTGCTGTGCGCGGATGCGGGCGTGCGCGCGGGCAATAGCCGCGGCTACTGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACNGGCaa                   <  1:901167/144‑1 (MQ=9)
                                                                                                                                     cgggCTCCGCAATAGCCTGTGGCGCCTCCCGTTCCCGCGCGTTGGCTCCCGCAATAGCCGCGTCCACGGCCGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAAt                  <  1:443688/149‑1 (MQ=17)
                                                                                                                                      gcgccccGCATTAGCCTGTTTCGGTGCCCGATTGCGCGCTTTGGCTCGAGCAACAGCCGCTTCGACGCCTGCTTTGCGCTGAGCCTCCTGTTCTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATa                 <  5:688142/146‑1 (MQ=14)
                                                                                                                                       ggCTCGTCATTAGCCTGTTGCTGGTCGGGTTTGTGGGCCTGTGCGCGGGCAATAGCGGCTTCTACTGCGGCTTTGCGCGGATCTACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAg                <  8:1272817/151‑1 (MQ=11)
                                                                                                                                             gCATGAGCCTGGTGCTGTTCCCGTTTGCGCGCGTTGGCGCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCtt          <  1:1132890/151‑1 (MQ=255)
                                                                                                                                               aTTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGTCTTCGCCGGCGGCTTTTCGCGGAAAGACAAGATCTTCTGGGTCGTATTTAGGCTGTTGCTGTTAAAGATTGCGGGCTTTGGCGCGGGCGATCGGGGcggcg        >  7:702424/1‑147 (MQ=255)
                                                                                                                                                ttATCCTGTTGCTGTTCGGGTTTGCTGGCTTTTGCGCGGGCAATAGCCGCTGCTACTGCGGCTTTGCGCGGATCTACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCTTCg        <  6:747141/150‑1 (MQ=14)
                                                                                                                                                 tatccGGTTGCTGTTCGCGTTTTCGGGCTTTGGCGCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCTACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCTTCGa       <  4:1130092/147‑1 (MQ=14)
                                                                                                                                                      |                                                                                                                                                     
GCGGCAACTGCCGCTTTGCGCGGATCAACCTGTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCTTCGACGGCG  >  DH1/2169398‑2169697

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑