Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | DH1 | 4,122,124 | 0 | C | A | 25.6% | 320.5 / 17.8 | 211 | intergenic (‑15/+22) | ECDH1_RS20430/ECDH1_RS20435 | tRNA‑Gly/tRNA‑Gly |
Reads supporting (aligned to +/- strand): ref base C (87/41); new base A (41/3); total (165/46) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 5.75e-04 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 212 total aligned reads displayed.
CTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTGTGCCTTACAGCACTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTG‑TGCT‑TTGCAGCACTTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTACTACTTAATTTTGCTTTCGTAATTTTCGCATTTCTGCGTCGTTACGGG > DH1/4121975‑4122272 | cAACCGCGCTATTCCCGCTTGGGTGGTGTGTCCCTTACATCACTTGCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTG‑TGCT‑TTgcag < 7:471439/151‑1 (MQ=17) aaCTTACCTATTCCCTCTTGTGTTGTCTGTGAGTTAAATCTCTTTAAAATTTTGGAGCGGGAAACGAGAGTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTG‑TGCT‑TTgcagc < 8:65166/151‑1 (MQ=14) cTGAGCTATTCCCGCTTGGGTGGTCTGTGCCTTACAGCACTTTAAAATTTTGGAGCGGGAAACGAGACTCGAACTAGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAAATGAGCTATTCCCGCGTGGGTCGTCAG‑TTGT‑TTgcagca > 5:582700/1‑150 (MQ=14) caGCTATTACGGCTTGGTTGGTCTGTCCGTTCCTGTACTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTG‑TGCT‑TTGCAGCACtt < 8:737671/150‑1 (MQ=17) tATTCCCGCTTGGGTGGTCTGTGCCTTACAGCACTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTGGTTGGTCTG‑TTGT‑GTGTAGGACTTTTcc > 5:833113/1‑150 (MQ=14) tATTCCCGCTTGGGTGGTCTGTGCCTTACAGCACTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTGCGTGGTCTT‑TGGT‑TTgccccacgtgtg > 3:1269141/1‑140 (MQ=14) atacgcgagtGGGTGGTCTGTGCCTTAAAGAACTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTG‑TGCT‑TTGCAGCACTTTTCaa < 5:174053/142‑1 (MQ=255) aatcccctttGGGTGGTCTGTTAATTACATCAATTTCATATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTG‑TGCT‑TTGCAGCACTTTTCaa < 4:211630/143‑1 (MQ=17) atcgctctgggtcgctCTGTGTCTTACATAACTTTCATATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTG‑TGCT‑TTGCAGCACTTTTCaaa < 4:746877/136‑1 (MQ=17) tCCCGCTTGGGTGGTCTGTGCCTTACAGCACTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTGGGTGGTCTG‑TGCT‑TTGCAGCACTGTTCaatt > 5:1093038/1‑149 (MQ=255) tCCCGCTTGGGTGGTCTGTGCCTTACAGCACTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTGGGTGGTATT‑TTAT‑TTGTAGGACTTTTCGAAt > 7:1275148/1‑151 (MQ=14) cccGCGGGGGCGGTCTGTGGCTTAGATCACTATAAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTG‑TGCT‑TTGCAGCACTTTTCAAAtt < 3:414566/151‑1 (MQ=17) gCTTGGGTGGTCTGTGCCTTACAGCACTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTGGGTCGTATG‑TTAT‑GTGGAGGACTTTTCCAAttttt > 5:940306/1‑150 (MQ=14) gCTTGGGTGGTCTGTGCCTTACAGCACTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTGCGTGGTCTG‑TGCG‑TTTCCGCACTTTTCTAAttttt > 7:105045/1‑150 (MQ=17) cTTGGGTGGTCTGTGCCTTACAGCACTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTT‑TTGT‑TTGCAGCACTTTTCAAATTTTgg > 7:317966/1‑151 (MQ=255) cTTGGGTGGTCTGTGCCTTACAGCACTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTGCGTGGTCTG‑TTAG‑TTTACGGAATTTTCAAATTTTgg > 6:1173388/1‑151 (MQ=14) cTTGGGTGGTCTGTGCCTTACAGCACTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTGCGAGGTCTG‑TGAT‑ATTCAGAAATTTTCAAAtttttg > 6:67353/1‑149 (MQ=14) ttGGGTGGTCTGTGCCTTACAGCACTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTG‑TGCT‑TTGCAGCACTTTTCAAATTTTgg > 7:518424/1‑150 (MQ=255) ttGGGTGGTCTGTGCCTTACAGCACTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTCGGTGGTCTT‑TGGT‑TTGCCGGACTTTTCAAATTTTgg > 3:673999/1‑150 (MQ=255) ttGGGTGGTCTGTGCCTTACAGCACTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTGGTACGTCTG‑TTAT‑TTTGAGAAATTTTCAAAtttttgc > 6:1065877/1‑148 (MQ=14) gggggggctctggagcTTAAATCACTTTCAAAATTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTG‑TGCT‑TTGCAGCACTTTTCAAATTTTGGa < 3:117563/136‑1 (MQ=14) tGGGTGGTCTGTGCCTTACAGCACTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGTTGGTATG‑TGAT‑TTTAAGCAATTTTCAAATTTTgg > 8:781444/1‑149 (MQ=17) tGGGTGGTCTGTGCCTTACAGCACTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTGGGTGGTCTG‑TGGT‑TTGGAGGACTTTTCAAATTTTgg > 1:448469/1‑149 (MQ=255) tGGGTGGTCTGTGCCTTACAGCACTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTACCGCTTGGGTGTTATT‑TTTT‑TTGGAGGAATTTTCAAATTTTgg > 2:179583/1‑149 (MQ=17) ggtgggtgtgttacTTAAAGTACTTTAAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTG‑TGCT‑TTGCAGCACTTTTCAAATTTTGGAGc < 8:31202/138‑1 (MQ=14) tggtCTGTGCCTTACAGCACTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTGGGTGGTCTG‑TGGG‑GTGGCGGACTTTTCAAATTTTGGCGCggg > 3:547074/1‑151 (MQ=17) ggtCTGTGCCTTACAGCACTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTG‑TGGG‑GTGGAGCACTTTTCAAATTTTGGAGCgggt > 1:1340565/1‑150 (MQ=255) tCTGTGCCTTACAGCACTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTG‑TGCT‑TTGCAGCACTTTTCAAAt > 1:144855/1‑137 (MQ=255) gtgttcattACATCCCTATAAAATTTTGGAGCGGTAAACGATACTCGAATTTTCTACCCCTACCTTTGCAAGGTAGTGCTATAAAAAATGAGCTATTCCGGATTGGGTGGTCTG‑TGAT‑TTTCATCACTTTTCAAATTTTGGAGCGGGaaa < 2:578874/143‑1 (MQ=9) tgtgCCTTACAGCACTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTATG‑TTAT‑TTGCAGGAATTTTCTAATTTTGGAGCGGTAAACg > 7:659806/1‑151 (MQ=18) tgtgCCTTACAGCACTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTGGGAGGTCTG‑TTAG‑TTGGCGGAATTTTCTAATTTTTGAGTGGGAACCg > 3:50981/1‑151 (MQ=14) tgCCTTACAGCACTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGCTACGTCTT‑TTAT‑TTGAAGAAATTTTCAAATTTTTGAGAGGGAAACg > 6:57755/1‑149 (MQ=17) gCCTTACAGCACTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTG‑TGCT‑GTGCAGCACTTTTCAAATTTTGGAGCGGGAACCgagc > 7:722362/1‑150 (MQ=255) cTTACAGCACTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGTTCTG‑TGAT‑TTGGAGCACTTTTCAAATTTTTGAGCGGGAAACgagccg > 5:1224300/1‑148 (MQ=255) cTTACAGCACTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTGGTTCGTATG‑TTTTGTTGC‑GGAATTTTCAAATTTATGAGGGGGAACCgaagcg > 4:1307440/1‑147 (MQ=11) tACAGCACTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGCGAGGTCAT‑TTGT‑ATGAAGCACTTTTCACATTTTTGAGGGGTAAACgcgccggg > 5:436665/1‑144 (MQ=14) tACAGCACTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCACGCTTGGGTGGTCTG‑TTAT‑TTTCAGTAATTTTCTAATTTTTGAGAGGGAAACGCGACTcc > 1:80050/1‑150 (MQ=17) cAGCACTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTAGGTGGTATG‑TTAT‑ATGACGAAATTTTCAAATTTTGGAGACGTAAACgccacacca > 2:1256897/1‑142 (MQ=14) tttattttaatcttttGGAGCGGTAAACGAGACTCCAAGTCGCTACCCCTATCTTGGCAATGTCGTGGTCTACGATCTGAGCTATTCCCGCTTGGGTGGTCTG‑TGAT‑TTTTATTACTTTTAATATTTTGGAGCGGGAAACGAGACTCGaa < 6:387229/138‑1 (MQ=2) gCACTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTCGTACGTATG‑TTGT‑GTGAAGAAATTTTCAAATTTATGAGAGGGAAACggcccacga > 8:1127020/1‑140 (MQ=14) cACTTTCAAATTTTGGAGTGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTG‑TGCT‑GTGGAGCACTTTTCAAATTTTGGAGAGGGAAACGCGCCTCGAACTc > 1:187778/1‑151 (MQ=14) cTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTGCGTCGTATG‑TGAT‑TTTAAGCACTTTTCAAATTTTTGAGAGGGTACGGCGACTCCATCTcgc > 6:1006009/1‑151 (MQ=14) atttCAATTTTTGTACCGGCAAACTTGACTAGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTG‑TGCT‑TTGCAGCACTTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTcgc < 8:6221/150‑1 (MQ=14) tCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTGGGTGGTCTG‑TGAT‑GTTCAGGACTTTTCAAATTTTGGAGCGGGAAACGAGCCGCGATCTCGCGAc > 1:931787/1‑151 (MQ=14) aaaaTTTTGGTGAGGGACAGGGGAGGGGAACTCGGGACCCCGACCTTGTGTCTGTCGTGCACTACCAACTGCGCTATTCCCGTTGGGGGGGTCTG‑TCCC‑TTACATCAC‑TTTAAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGAccc < 5:1186325/150‑1 (MQ=2) ttttGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTG‑TTTT‑TTTAAGAAATTTTCAAATTTTTGAGACGGAAACGCGACTCGAACTCGCGAcaa > 4:1013193/1‑146 (MQ=11) cGGGAAACGTGCCGCGAACCCGCGACCCCGACCTTGTCAAGGTCGTGCTCTACCAACTGCGCTATTCCCGCTTGGGTGGTCTG‑TGGT‑TTGCAGCACTTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCa < 7:996722/151‑1 (MQ=14) cGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTG‑TGCT‑TTGCCGCACTTTTCAAATTTTGGAGCGGGAAACGCGCCTCGAACTCGCGACCCCGCCCTTCGc > 7:397390/1‑150 (MQ=255) cGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTGGGTGGTCTG‑TGCT‑GTTGAGCACTTTTCTAATTTTTGAGCGGGAAACGAGACTCGAACTCTCGACCCCGAACTTggg > 6:1121369/1‑149 (MQ=11) ggAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTCCGTGGTCAG‑TTGT‑ATGAAGGAATTTTCGAATTTTGGATAGGGAAACTAGACACGATCTATCGACCACTACATTggaa > 8:25249/1‑147 (MQ=2) gAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTCGGTCGTCTC‑AGCT‑TTGCAGCTCTTTTCAAATTTTGGAGCGGGATACGAGCCTCGCACTCGCGACCCCGACCTTGGCAAgg > 3:342205/1‑151 (MQ=14) aaaCGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTGGTTGGTCTG‑TGCT‑TTGCAGCACTTTTCAAATTTTTGAGAGGGAAAGGAGACTCGAACTCGCGACCAAGACGTTGGCAAGGt > 8:363654/1‑151 (MQ=14) aaCGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTG‑TGCT‑TTGCAGCACTTTTCTAATTTTGGAGAGGGAAACGAGACTCGAACTCGCGACCCCGCCCTAGGCAAGCTc > 4:442280/1‑151 (MQ=255) cGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGAGGTCTG‑TTGT‑TTGCAGGAATTTTCAAATTTAGGAGAGGGAACCGCGACTCCAAATAGCGACCCCGACCTTCGCAAGCTCgg > 4:262266/1‑150 (MQ=14) cGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGCGTGGTATG‑TGCT‑ATGCAGCACTTTTCAAATTTTGGAGAGGGAACCGAGACTCGAACTCGCGACCCCGCCATTCCCAAGGACGt > 2:281182/1‑151 (MQ=14) agaCTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTGCTTGTTATG‑TGAT‑GTTGAGGACTTTTCAAATTTTGGAGTGGTTACCGCGGGTCGATCTGGCGAGACCGCGCTTGGTATGGTCGTGc > 1:159469/1‑151 (MQ=2) cTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTATT‑TGAT‑TTTAAGCACTTTTCAAATTTTTGAGAGGGAAACGAGACTCGAACTAGCGACACAGACATTGGCAAGGtagacctc > 8:1352814/1‑143 (MQ=11) gAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTG‑TGGT‑TTGGAGCACTTTTCGAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCGCTAc > 5:100072/1‑150 (MQ=255) aaCTCGCGAGCCCGACCTTGGAATGGTGTTGCTCTTCCACCTGAGCGATTCCCGCTTGGGTGGTCTG‑TGCC‑TTGCAGCACTTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCa < 1:1255410/151‑1 (MQ=11) aCTCGCGACCCCGACCTTGGCAAGGTCTTGCTCTACCAACTGACCTATTCCCGCTTGGGTGGTCTG‑TGCT‑TTTCATCACTTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCaa < 8:1211870/151‑1 (MQ=255) tCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTG‑TGCT‑TTGCAGCACTTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACt > 7:101262/1‑151 (MQ=38) ccgcgCCCCCGCCCGTGGCCAGGGCGTGCTCTACCATTTTTTTTATTACCCGTTGGGTTGTGTG‑TTCT‑ATTCAGGACTTTTCAATTTTTGGATCGTGTAAGGTGTTTCGATCTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACt < 2:1275965/150‑1 (MQ=2) gACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGCGTCGTCTG‑TGAT‑TTGCAGAACTTTTCAAATTTATGAGCGGGAAACGAGACTCGAACTAGCGACACCTCACTAGCAAAGCTCGAGCGCTACAAACTg > 2:840661/1‑148 (MQ=14) caCCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGCGACGTCTG‑TTTG‑TTGGAGAAATTTTCAAATTTAGGATCCGGAACCGACACGCTATCTCCAGAACACACCCGAGGCAAGGTCGTCATCTACCTACTg > 5:775233/2‑148 (MQ=2) aCCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTATG‑TGGT‑TTGCAGCAATTTTCAAATTTTGGAGCGGGAAACGCGACTCGAACTCGCGACCACGCCCTTGGCAAGGTCGTGCTCTACAAACTGAGCt > 1:65618/1‑151 (MQ=14) cggccTTGGCCTGCTGGTGCTCTAGCACGTGCGGTTTCCCCTCTTGGGTGGTCTG‑TGCC‑TTGCAGCAATTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTc < 5:375771/148‑1 (MQ=11) gACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTG‑TGCT‑TTGCAGCACTTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTcc > 3:455734/1‑151 (MQ=38) cTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTG‑TGAT‑TTTCAGAACTTTTCAAATTTTGGAGCGGGAAACGAGCCTCGAAATAGCGACCCAGCGCTTGGGAAGGTCGTGCTCTAACAACTGAGGTATTACcgg > 8:861195/1‑150 (MQ=11) ttGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGCTTCTTAAGTTGGG‑TTG‑AGAAATTTTCAAATTTTTGAGAGGTAAACGACACGCGATGTCGCGAGAACGACCTTCGAAAGGTACTGCACTAAAAACTGATATATTccgt > 3:756084/1‑147 (MQ=2) aGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTATG‑TGCT‑TTGCAGCACTTTTCAAATTTTGGAGAGGTAAACGAGACTCGAAATCGCGACACCGACATGGGGAAGGTCGTGCTCTAAAAACTGAGCTATTCACGCGtacta > 1:1371553/1‑150 (MQ=14) tCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTG‑TGCT‑GTGCAGCACTTTTCAAATTTTGGAGCGGGAAACGAGCCTCGAACTAGCGACACCGAGCTGGCCAAGGTCGTCCTCTACAAACTGAGCTATTCCCGCGTACTACtt > 3:383997/1‑150 (MQ=14) cgtccgcccccAACGGAGCTCTACGCGCTTGCGTGGTGTG‑CCCT‑GGGGAGCTCTTCCGAACTTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTACTACTTaa < 3:236545/142‑1 (MQ=14) tGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTG‑TGGT‑TTGGAGCACTTTTCAAATTTTTGAGCGGGAAACGAGACTCGAAATCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCAGCGTACTACTTAAtt > 5:297733/1‑151 (MQ=255) tGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTG‑TGCT‑TTGCAGCACTTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTACTACTTAAtt > 8:76716/1‑151 (MQ=255) tGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTG‑TGCT‑TTGCAGCACTTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTACTACTTAAtt > 7:218963/1‑151 (MQ=255) ctctACCAACTGAGCTATTCCCGCTTGGGTGGTCTG‑TGCT‑TTGCAGCACTTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTACTACTTAAtttt > 3:891116/1‑151 (MQ=255) tctACCAACTGAGCTATTCCCGCTTGGGTGGTCTG‑TGCT‑TTGCAGCACTTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTACTACTTAATTTTg > 7:49563/1‑151 (MQ=255) tctACCAACTGAGCTATTCCCGCTTGGGTGGTCTG‑TGCT‑TTGCAGCACTTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTCCTCTACCAACTGAGCTATTCCCGCGTACTACGTAAGTTTg > 2:759366/1‑151 (MQ=255) ctACCAACTGAGCTATTCCCGCTTGGGTGGTCTG‑TGCT‑TTGCAGCACTTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTACTACTTAATTTTGc > 4:674553/1‑151 (MQ=255) aCCAACTGAGCTATTCCCGCTTGGGTGGTCTG‑TGCT‑TTGCAGCACTTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTACTACTTAATTTTGCtt > 6:35127/1‑151 (MQ=255) ccAACTGAGCTATTCCCGCTTGGGTGGTCTG‑TGCT‑TTGCAGCACTTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTACTACTTAATTTTGCttt > 3:495466/1‑151 (MQ=255) ccAACTGAGCTATTCCCGCTTGGGTGGTCTG‑TGCT‑TTGCAGCACTTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTACTACATAATTTTGAttt > 6:479274/1‑151 (MQ=255) aaCTGAGCTATTCCCGCTTGGGTGGTCTG‑TGCT‑TTGCAGCACTTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTACTACTTAATTTTGCTTTCg > 4:955372/1‑151 (MQ=255) aaCTGAGCTATTCCCGCTTGGGTGGTCTG‑TGCT‑TTGCAGCACTTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTACTACTTAATTTTGCTTTCg > 2:144879/1‑151 (MQ=255) cTGAGCTATTCCCGCTTGGGTGGTCTG‑TGCT‑TTGCAGCACTTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTACTACTTAATTTTGCTTTctt > 3:844282/1‑148 (MQ=255) cTGAGCTATTCCCGCTTGGGTGGTCTG‑TGCT‑TTGCAGCACTTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTACTACTTAATTTTGCTTTCGt > 1:1303545/1‑150 (MQ=255) tGAGCTATTCCCGCTTGGGTGGTCTG‑TGCT‑TTGCAGCACTTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTACTACTTAATTTTGCTTTCGTa > 8:553863/1‑150 (MQ=255) tCCCGCTTGGGTGGTCTG‑TGCT‑TTGCAGCACTTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTACTACTTAATTTTGCTTTCGTAATTTTCGc > 5:1384754/1‑150 (MQ=255) cccGCTTGGGTGGTCTG‑TGCT‑TTGCAGCACTTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTACTACTTAATTTTGCTTTCGTAATTTTCGCAt > 2:100418/1‑151 (MQ=255) ccGCTTGGGTGGTCTG‑TGCT‑TTGCAGCACTTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTACTACTTAATTTTGCTTTCGTAATTTTCGCAtt > 5:498654/1‑151 (MQ=255) cGCTTGGGTGGTCTG‑TGCT‑TTGCAGCACTTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTACTACTTAATTTTGCTTTCGTAATTTTCGCAttt > 1:1138816/1‑151 (MQ=255) gCTTGGGTGGTCTG‑TGCT‑TTGCAGCACTTTTCAAATTTTGGAGCGGGAAACGAGACTCGACCTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTACTACTTAATTTTGCTTTCGTAATTTTCGCATTTc > 2:388908/1‑151 (MQ=255) cTTGGGTGGTCTG‑TGCT‑TTGCAGCACTTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTACTACTTAATTTTGCTTTCGTAATTTTCGCATTTCt > 4:670485/1‑151 (MQ=255) cTTGGGTGGTCTG‑TGCC‑TTACAGCAC‑TTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGCTTCTTATTTTTTATTTAGGAATTTTCTAATTTTTg > 6:785929/1‑151 (MQ=11) ttGGGTGGTCTG‑TGCT‑TTGCAGCACTTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTACTACTTAATTTTGCTTTCGTAATTTTCGCATTTCTg > 6:1247410/1‑151 (MQ=255) tGGGTGGTCTG‑TGCT‑TTGCAGCACTTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTACTACTTAATTTTGCTTTCGTAATTTTCGCATTTCTGc > 8:755653/1‑151 (MQ=255) ggtCTG‑TGCT‑TTGCAGCACTTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTACTACTTAATTTTGCTTTCGTAATTTTCGCATTTCTGcgtcgt > 7:1163367/1‑151 (MQ=255) gtCTG‑TGCT‑TTGCAGCACTTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTACTACTTAATTTTGCTTTCGTAATTTTCGCATTTCTGCGTCGtt > 2:943267/1‑151 (MQ=255) tCTG‑TGCT‑TTGCAGCACTTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTACTACTTAATTTTGCTTTCGTAATTTTCGCATTTCTGCGTCGtt > 5:661340/1‑150 (MQ=255) cT‑TTGCAGCACTTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTACTACTTAATTTTGCTTTCGTAATTTTCGCATTTCTGCGTCGTTACggg > 2:346595/1‑149 (MQ=255) | CTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTGTGCCTTACAGCACTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTG‑TGCT‑TTGCAGCACTTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTACTACTTAATTTTGCTTTCGTAATTTTCGCATTTCTGCGTCGTTACGGG > DH1/4121975‑4122272 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |