New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? DH1 = 244351915 (0.050)192 (0.850) 134/248 0.2 94.5% intergenic (+226/‑735) uspF/ynaE universal stress protein F/cold‑shock protein
?DH1 2466580 = 10 (0.040)coding (51/936 nt) ttcA tRNA 2‑thiocytidine(32) synthetase TtcA

Only 100 of 239 total aligned reads displayed.

CATGAACGACGAACAGATAGCCATGTTGAATGCGCGGTTATCGTAGTTGCAAAGTTTGCCCCCAATTTGCCCCATTTAGTACCAGAGAACTGAAATAATGCAAGAAAATCAACAAATTACAAAGAAAGAACAATACAACCTGAACAAATTACAAAAACGTCTGCGTCGTAACGTGGGCGAAGCCATTGCTGACTTCAATATGATTGAAGAAGGCGATCGCATCATGGTTTGCCTCTCCGGGGGTAAAGACAGCTATACCATGCTGGAGATTCTGCGCAATTTGCAGCAAAGCGCGCC  >  DH1/2466433‑2466729
                                                                                                                                                   |                                                                                                                                                     
cATGAACGACGAACAGATAGCCATGTTGAATGCGCGGTTATCGTAGTTGCAAAGTTTGCCCCCAATTTGCCCCATTTAGTACCAGAGAACTGAAATAATGCAAGAAAATCAACAAATTACAAAGAAAGAACAATACAACCTGAACAAATTa                                                                                                                                                    <  5:687721/151‑1 (MQ=255)
 acacgccacagttttttatatcagatttcttatgctgggcgttccggcatgacgcatactcttctgatgccatataacgaattgagtcgcttttaaatgtcgcaaaatcaagaaattagtaagaaagaacaatacaacctgaacaaATTAc                                                                                                                                                   <  2:1037611‑M2/5‑1 (MQ=255)
    cgccacagttttttatatcagatttcttatgctgggcgttccggcatgacgcatactcttctgatgccatataacgaattgagtcgcttttaaatgtcgcaaaatcaagaaattagtaagaaagaacaatacaacctgaacaaATTACaaa                                                                                                                                                <  7:392920‑M2/8‑1 (MQ=255)
    cgccacagttttttatatcagatttcttatgctgggcgttccggcatgacgcatactcttctgatgccatataacgaattgagtcgcttttaaatgtcgcaaaatcaagaaattagtaagaaagaacaatacaacctgaacaaATTACaaa                                                                                                                                                <  1:845928‑M2/8‑1 (MQ=255)
        acagttttttatatcagatttcttatgctgggcgttccggcatgacgcatactcttctgatgccatataacgaattgagtcgcttttaaatgtcgcaaaatcaagaaattagtaagaaagaacaatacaacctgaacaaATTACAAAAACg                                                                                                                                            <  1:745264‑M2/12‑1 (MQ=255)
         cagttttttatatcagatttcttatgctgggcgttccggcatgacgcatactcttctgatgccatataacgaattgagtcgcttttaaatgtcgcaaaatcaagaaattagtaagaaagaacaatacaacctgaacaaATTACAAAAACGt                                                                                                                                           >  3:668660‑M2/139‑151 (MQ=255)
           gttttttatatcagatttcttatgctgggcgttccggcatgacgcatactcttctgatgccatataacgaattgagtcgcttttaaatgtcgcaaaatcaagaaattagtaagaaagaacaatacaacctgaacaaATTACAAAAACGTCt                                                                                                                                         <  4:821123‑M2/15‑1 (MQ=255)
            ttttttatatcagatttcttatgctgggcgttccggcatgacgcatactcttctgatgccatataacgaattgagtcgcttttaaatgtcgcaaaatcaagaaattagtaagaaagaacaatacaacctgaacaaATTACAAAAACGTCt                                                                                                                                         <  3:436030‑M2/15‑1 (MQ=255)
            aCAGATAGCCATGTTGAATGCGCGGTTATCGTAGTTGCAAAGTTTGCCCCCAATTTGCCCCATTTAGTACCAGAGAACTGAAATAATGCAAGAAAATCAACAAATTACAAAGAAAGAACAATACAACCTGAACAAATTACAAAAACGTCTg                                                                                                                                        >  2:882460/1‑151 (MQ=255)
             tttttatatcagatttcttatgctgggcgttccggcatgacgcatactcttctgatgccatataacgaattgagtcgcttttaaatgtcgtaaaatcaagaaattagtaagaaagaacaatacaacctgaacaaATTACAAAAACGTCTGc                                                                                                                                       >  3:344916‑M2/135‑151 (MQ=255)
              ttttatatcagatttcttatgctgggcgttccggcatgacgcatactcttctgatgccatataacgaattgagtcgcttttaaatgtcgcaaaatcaagaaattagtaagaaagaacaatacaacctgaacaaATTACAAAAACGTCTGcg                                                                                                                                      >  4:200975‑M2/134‑151 (MQ=255)
               tttatatcagatttcttatgctgggcgttccggcatgacgcatactcttctgatgccatataacgaattgagtcgcttttaaatgtcgcaaaatcaagaaattagtaagaaagaacaatacaacctgaacaaATTACAAAAACGTCTGcg                                                                                                                                      <  7:570907‑M2/18‑1 (MQ=255)
                 tatatcagatttcttatgctgggcgttccggcatgacgcatactcttctgatgccatataacgaattgagtcgcttttaaatgtcgcaaaatcaagaaattagtaagaaagaacaatacaacctgaacaaATTACAAAAACGTCTGcgtc                                                                                                                                    <  6:244341‑M2/20‑1 (MQ=255)
                 tatatcagatttcttatgctgggcgttccggcatgacgcatactcttctgatgccatataacgaattgagtcgcttttaaatgtcgcaaaatcaagaaattagtaagaaagaacaatacaacctgaacaaATTACAAAAACCTCTGcgtcg                                                                                                                                   >  8:229044‑M2/131‑151 (MQ=255)
                    atcagatttcttatgctgggcgttccggcatgacgcatactcttctgatgccatataacgaattgagtcgcttttaaatgtcgcaaaatcaagaaattagtaagaaagaacaatacaacctgaacaaATTACAAAAACGTCTGCGTCGTaa                                                                                                                                <  3:937510‑M2/24‑1 (MQ=255)
                      cagatttcttatgctgggcgttccggcatgacgcatactcttctgatgccatataacgaattgagtcgcttttaaatgtcgcaaaatcaagaaattagtaagaaagaacaatacaacctgaacaaATTACAAAAACGTCTGCGTCGTAACg                                                                                                                              <  7:227104‑M2/26‑1 (MQ=255)
                        gatttcttatgctgggcgttccggcatgacgcatactcttctgatgccatataacgaattgagtcgcttttaaatgtcgcaaaatcaagaaattagtaagaaagaacaatacaacctgaacaaATTACAAAAACGTCTGCGTCGTAACGTg                                                                                                                            >  6:66378‑M2/124‑151 (MQ=255)
                         atttcttatgctgggcgttccggcatgacgcatactcttctgatgccatataacgaattgagtcgcttttaaatgtcgcaaaatcaagaaattagtaagaaagaacaatacaacctgaacaaATTACAAAAACGTCTGCGTCGTAACGTgg                                                                                                                           >  7:272540‑M2/123‑151 (MQ=255)
                           ttcttatgctgggcgttccggcatgacgcatactcttctgatgccatataacgaattgagtcgcttttaaatgtcgcaaaatcaagaaattagtaagaaagaacaatacaacctgaacaaATTACAAAAACGTCTGCGTCGTAACGTGGGc                                                                                                                         >  2:663530‑M2/121‑151 (MQ=255)
                            tcttatgctgggcgttccggcatgacgcatactcttctgatgccatataacgaattgagtcgcttttaaatgtcgcaaaatcaagaaattagtaagaaagaacaatacaacctgaacaaATTACAAAAACGTCTGCGTCGTAACGTGGGc                                                                                                                         <  3:600504‑M2/31‑1 (MQ=255)
                            tcttatgctgggcgttccggcatgacgcatactcttctgatgccatataacgaattgagtcgcttttaaatgtcgcaaaatcaagaaattagtaagaaacaacaataaaacctgaacaaATTACAAAAACGTCTGCGTCCTAACGTGGGCg                                                                                                                        >  1:332573‑M2/120‑151 (MQ=255)
                              ttatgctgggcgttccggcatgacgcatactcttctgatgccatataacgaattgagtcgcttttaaatgtcgcaaaatcaagaaattagtaagaaagaacaatacaacctgaacaaATTACAAAAACGTCTGCGTCGTAACGTGGGCGa                                                                                                                       <  6:739502‑M2/33‑1 (MQ=255)
                               tatgctgggcgttccggcatgacgcatactcttctgatgccatataacgaattgagtcgcttttaaatgtcgcaaaatcaagaaattagtaagaaagaacaatacaacctgaacaaATTACAAAAACGTCTGCGTCGTAACGTGGGCGa                                                                                                                       >  6:1075643‑M2/117‑149 (MQ=255)
                               tatgctgggcgttccggcatgacgcatactcttctgatgccatataacgaattgagtcgcttttaaatgtcgcaaaatcaagaaattagtaagaaagaacaatacaacctgaacaaATTACAAAAACGTCTGCGTCGTAACGTGGGCGa                                                                                                                       >  7:699901‑M2/117‑149 (MQ=255)
                                  gctgggcgttcctgcatgacgcatactcttctgatgccatataacgaattgagtcgcttttaaatgtcgcaaaatcaagaaattagtaagaaagaacaatacaacctgaacaaATTACAAAAACGTCTGCGTCGTAACGTGGGCGAAGcc                                                                                                                   <  3:276327‑M2/37‑1 (MQ=255)
                                  gctgggcgttccggcatgacgcatactcttctgatgccatataacgaattgagtcgcttttaaatgtcgcaaaatcaagaaattagtaagaaagaacaatacaacctgaacaaATTACAAAAACGTCTGCGTCGTAACGTGGGCGAAGcc                                                                                                                   <  5:114311‑M2/37‑1 (MQ=255)
                                  gctgggcgttccggcatgacgcatactcttctgatgccatataacgaattgagtcgcttttaaatgtcgcaaaatcaagaaattagtaagaaagaacaatacaacctgaacaaATTACAAAAACGTCTGCGTCGTAACGTGGGCGAAGCCa                                                                                                                  <  1:145838‑M2/38‑1 (MQ=255)
                                   ctgggcgttccggcatgacgcatactcttctgatgccatataacgaattgagtcgcttttaaatgtcgcaaaatcaagaaattagtaagaaagaacaatacaacctgaacaaATTACAAAAACGTCTGCGTCGTAACCTGGGCGAAGCCAt                                                                                                                 >  4:863332‑M2/113‑151 (MQ=255)
                                     gggcgttccggcatgacgcatactcttctgatgccatataacgaattgagtcgcttttaaatgtcgcaaaatcaagaaattagtaagaaagaacaatacaacctgaacaaATTACAAAAACGTCTGCGTCGTAACGTGGGCGAAGCCAt                                                                                                                 <  1:245423‑M2/39‑1 (MQ=255)
                                     gggcgttccggcatgacgcatactcttctgatgccatataacgaattgagtcgcttttaaatgtcgcaaaatcaagaaattagtaagaaagaacaatacaacctgaacaaATTACAAAAACGTCTGCGTCGTAACGTGGGCGAAGCCATTg                                                                                                               >  8:597096‑M2/111‑151 (MQ=255)
                                     gggcgttccggcatgacgcatactcttctgatgccatataacgaattgagtcgcttttaaatgtcgcaaaatcaagaaattagtaagaaagaacaatacaacctgaacaaATTACAAAAACGTCTGCGTCGTAACGTGGGCGAAGCCATTg                                                                                                               <  1:686339‑M2/41‑1 (MQ=255)
                                        cgttccggcatgacgcatactcttctgatgccatataacgaattgagtcgcttttaaatgtcgcaaaatcaagaaattagtaagaaagaacaatacaacctgaacaaATTACAAAAACGTCTGCGTCGTAACGTGGGCGAAGCCATTGCTg                                                                                                            <  2:478254‑M2/44‑1 (MQ=255)
                                           tccggcatgacgcatactcttctgatgccatataacgaattgagtcgcttttaaatgtcgcaaaatcaagaaattagtaagaaagaacaatacaacctgaacaaATTACAAAAACGTCTGCGTCGTAACGTGGGCGAAGCCATTGCTGACt                                                                                                         >  5:501537‑M2/105‑151 (MQ=255)
                                               gcatgacgcatactcttctgatgccatataacgaattgagtcgcttttaaatgtcgcaaaatcaagaaattagtaagaaagaacaatacaacctgaacaaATTACAAAAACGTCTGCGTCGTAACGTGGGCGAAGCCATTGCTGACTTCaa                                                                                                     <  7:141687‑M2/51‑1 (MQ=255)
                                                gCAAAGTTTGCCCCCAATTTGCCCCATTTAGTACCAGAGAACTGAAATAATGCAAGAAAATCAACAAATTACAAAGAAAGAACAATACAACCTGAACAAATTACAAAAACGTCTGCGTCGTAACGTGGGCGAAGCCATTGCTGACTTCAat                                                                                                    <  3:751485/151‑1 (MQ=255)
                                                catgacgcatactcttctgatgccatataacgaattgagtcgcttttaaatgtcgcaaaatcaagaaattagtaagaaagaacaatacaacctgaacaaATTACAAAAACGTCTGCGTCGTAACGTGGGCGAAGCCATTGCTGACTTCAat                                                                                                    >  1:618243‑M2/100‑151 (MQ=255)
                                                 atgacgcatactcttctgatgccatataacgaattgagtcgcttttaaatgtcgcaaaatcaagaaattagtaagaaagaacaatacaacctgaacaaATTACAAAAACGTCTGCGTCGTAACGTGGGCGAAGCCATTGCTGACTTCAata                                                                                                   <  4:366631‑M2/53‑1 (MQ=255)
                                                  aaaGTTTGCCCCCAATTTGCCCCATTTAGTACCAGAGAACTGAAATAATGCAAGAAAATCAACAAATTACAAAGAAAGAACAATACAACCTGAACAAATTACAAAAACGTCTGCGTCGTAACGTGGGCGAAGCCATTGCTGACTTCAatat                                                                                                  <  1:561205/151‑1 (MQ=255)
                                                    acgcatactcttctgatgccatataacgaattgagtcgcttttaaatgtcgcaaaatcaagaaattagtaagaaagaacaatacaacctgaacaaATTACAAAAACGTCTGCGTCGTAACGTGGGCGAAGCCATTGCTGACTTCAATATg                                                                                                 >  5:471394‑M2/96‑150 (MQ=255)
                                                     cgcatactcttctgatgccatataacgaattgagtcgcttttaaatgtcgcaaaatcaagaaattagtaagaaagaacaatacaacctgaacaaATTACAAAAACGTCTGCGTCGTAACGTGGGCGAAGCCATTGCTGACTTCAATATGAt                                                                                               <  7:24206‑M2/57‑1 (MQ=255)
                                                      tttGCCCCCAATTTGCCCCATTTAGTACCAGAGAACTGAAATAATGCAAGAAAATCAACAAATTACAAAGAAAGAACAATACAACCTGAACAAATTACAAAAACGTCTGCGTCGTAACGTGGGCGAAGCCATTGCTGACTTCAATATGAtt                                                                                              >  1:714332/1‑151 (MQ=255)
                                                          actcttctgatgccatataacgaattgagtcgcttttaaatgtcgcaaaatcaagaaattagtaagaaagcacaatacaacctgaacaaATTACAAAAACGTCTGCGTCGTAACGTGGGCGAAGCCATTGCTGACTTCAATATGATTga                                                                                            >  8:898158‑M2/90‑149 (MQ=255)
                                                          actcttctgatgccatataacgaattgagtcgcttttaaatgtcgcaaaatcaagaaattagtaagaaagaacaatacaacctgaacaaATTACAAAAACGTCTGCGTCGTAACGTGGGCGAAGCCATTGCTGACTTCAATATGATTgaa                                                                                           <  3:249927‑M2/61‑1 (MQ=255)
                                                               tctgatgccatataacgaattgagtcgcttttaaatgtcgcaaaatcaagaaattagtaagaaagaacaatacaacctgaacaaATTACAAAAACGTCTGCGTCGTAACGTGGGCGAAGCCATTGCTGACTTCAATATGATTGaagaag                                                                                       <  2:448627‑M2/65‑1 (MQ=255)
                                                               tctgatgccatataacgaattgagtcgcttttaaatgtcgcaaaatcaagaaattagtaagaaagaacaatacaacctgaacaaATTACAAAAACGTCTGCGTCGTAACGTGGGCGAAGCCATTGCTGACTTCAATATGATTGAAGAAgg                                                                                      <  3:108550‑M2/66‑1 (MQ=255)
                                                                atgatgccatataacgaattgagtcgcttttaaatgtcgcaaaatcaagaaattagtaagaaagaacaatacaacctgaacaaATTACAAAAACGTCTGCGTCGTAACGTGGGCGAAGCCATTGCTGACTTCAATATGATTGAAGAAGGCg                                                                                    <  7:1039027‑M2/68‑1 (MQ=255)
                                                                      ccatataacgaattgagtcgcttttaaatgtcgcaaaatcaagaaattagtaagaaagaacaatacaacctgaacaaATTACAAAAACGTCTGCGGCGTAACGTGGGCGAAGCCATTGCTGACTTCAATATGATTGAAGAAGGCGATCGc                                                                               >  5:1063612‑M2/78‑150 (MQ=255)
                                                                        cATTTAGTACCAGAGAACTGAAATAATGCAAGAAAATCAACAAATTACAAAGAAAGAACAATACAACCTGAACAAATTACAAAAACGTCTGCGTCGTAACGTGGGCGAAGCCATTGCTGACTTCAATATGATTGAAGAAGGCGATCGcatc                                                                            >  1:393298/1‑151 (MQ=255)
                                                                          ataacgaattgagtcgcttttaaatgtcgcaaaatcaagaaattagtaagaaagaacaatacaacctgaacaaATTACAAAAACGTCTGCGTCGTAACGTGGGCGAAGCCATTGCTGACTTCAATATGATTGAAGAAGGCGATCGcatcat                                                                          >  4:588230‑M2/74‑151 (MQ=255)
                                                                           taacgaattgagtcgcttttaaatgtcgcaaaatcaagaaattagtaagaaagaacaatacaacctgaacaaATTACAAAAACGTCTGCGTCGTAACGTGGGCGAAGCCATTGCTGACTTCAATATGATTGAAGAAGGCGATCGCCTCATg                                                                         >  8:351940‑M2/73‑151 (MQ=255)
                                                                               gaattgagtctcttttaaatgtcgcaaaatcaagaaattagtaagaaagaacaatacaacctgaacaaATTACAAAAACGTCTGCGTCGTAACGTGGGCGAAGCCATTGCTGACTTCAATATGATTGAAGAAGGCGATCGCATCATGGttt                                                                     >  5:81611‑M2/69‑151 (MQ=255)
                                                                               gaattgagtcgcttttaaatgtcgcaaaatcaagaaattagtaagaaagaacaatacaacctgaacaaATTACAAAAACGTCTGCGTCGTAACGTGGGCGAAGCCATTGCTGAGTTCAATATGATTGAAGAAGGCGATCGCATCATGGttt                                                                     >  1:264795‑M2/69‑151 (MQ=255)
                                                                               gaattgagtcgcttttaaatgtcgcaaaatcaagaaattagtaagaaagaacaatacaacctgaacaaATTACAAAAACGTCTGCGTCGTAACGTGGGCGAAGCCATTGCTGACTTCAATATGATTGAAGAAGGCGATCGCATCATGGttt                                                                     >  8:817861‑M2/69‑151 (MQ=255)
                                                                               gaattgagtcgcttttaaatgtcgcaaaatcaagaaattagtaagaaagaacaatacaacctgaacaaATTACAAAAACGTCTGCGTCGTAACGTGGGCGAAGCCATTGCTGACTTCAATATGATTGAAGAAGGCGATCGCATCATGGttt                                                                     >  2:317754‑M2/69‑151 (MQ=255)
                                                                                aattgagtcgcttttaaatgtcgcaaaatcaagaaattagtaagaaagaacaatacaacctgaacaaATTACAAAAACGTCTGCGTCGTAACGTGGGCGAAGCCATTGCTGACTTCAATATGATTGAAGAAGGCGATCGCATCATGGTTTg                                                                    >  3:890295‑M2/68‑151 (MQ=255)
                                                                                  ttgagtcgcttttaaatgtcgcaaaatcaagaaattagtaagaaagaacaatacaacctgaacaaATTACAAAAACGTCTGCGTCGTAACGTGGGCGAAGCCATTGCTGACTTCAATATGATTGAAGAAGGCGATCGCATCATGGTTTGcc                                                                  >  3:695775‑M2/66‑151 (MQ=255)
                                                                                     agtcgcttttaaatgtcgcaaaatcaagaaattagtaagaaagaacaatacaacctgaacaaATTACAAAAACGTCTGCGTCGTAACGTGGGCGAAGCCATTGCTGACTTCAATATGATTGAAGAAGGCGATCGCATCATGGTTTGCctct                                                               >  6:984136‑M2/63‑151 (MQ=255)
                                                                                     agtcgcttttaaatgtcgcaaaatcaagaaattagtaagaaagaacaatacaacctgaacaaATTACAAAAACGTCTGCGTCGTAACGTGGGCGAAGCCATTGCTGACTTCAATATGATTGAAGAAGGCGATCGCATCATGGTTTGCctct                                                               <  1:1066707‑M2/89‑1 (MQ=255)
                                                                                     agtcgcttttaaatgtcgcaaaatcaagaaattagtaagaaagaacaatacaacctgaacaaATTACAAAAACGTCTGCGTCGTAACGTGGGCGAAGCCATTGCTGACTTCAATATGAATGAAGAAGGCGATCGCATCATGGTTTGCctc                                                                >  2:920656‑M2/63‑150 (MQ=255)
                                                                                      gtcgcttttaaatgtcgcaaaagcaagaaattagtaagaaacaacaaaacaacctgaacaaATTACAAAAACGTCTGCGTCGTAACGTGGGCGAAGCCATTGCTGACTTCAATATGATTGAAGAAGGCGATCGCATCATGGTTTGCCtctc                                                              <  7:953394‑M2/90‑1 (MQ=255)
                                                                                        cgcttttaaatgtcgcaaaatcaagaaattagtaagaaagaacaatacaacctgaacaaATTACAAAAACGTCTGCGTCGTAACGTGGGCGAAGCCATTGCTGACTTCAATATGATTGAAGAAGGCGATCGCATCATGGTTTGCCTCTCCg                                                            >  7:773575‑M2/60‑151 (MQ=255)
                                                                                             ttaaatgtcgcaaaatcaagaaattagtaagaaagaacaatacaacctgaacaaATTACAAAAACGTCTGCGTCGTAACGTGGGCGAAGCCATTGCTGACTTCAATATGATTGAAGAAGGCGATCGCATCATGGTTTGCCTCTCCGGGGGt                                                       >  2:265716‑M2/55‑151 (MQ=255)
                                                                                              taaatgtctcaaaatcaagaaattagtaagaaagaacaatacaacctgaacaaATTACAAAAACGTCTGCGTCGTAACGTGGGCGAAGCCATTGCTGACTTCAATATGATTGAAGAAGGCGATCGCATCATGGTTTGCCTCTCCGGGGGt                                                       <  2:587269‑M2/97‑1 (MQ=255)
                                                                                               aaatgtcgcaaaatcaagaaattagtaagaaagaacaatacaacctgaacaaATTACAAAAACGTCTGCGTCGTAACGTGGGCGAAGCCATTGCTGACTTCAATATGATTGAAGAAGGCGATCGCATCATGGTTTGCCTCTCCGGGGGTa                                                      <  2:137415‑M2/98‑1 (MQ=255)
                                                                                                aatgtcgcaaaatcaagaaattagtaagaaagaacaatacaacctgaacaaATTACAAAAACGTCTGCGTCGTAACGTGGGCGAAGCCATTGCTGACTTCAATATGATTGAAGAAGGCGATCGCATCATGGTTTGCCTCTCCGGGGGTaaa                                                    <  7:815352‑M2/100‑1 (MQ=255)
                                                                                                   gtcgcaaaatcaagaaattagtaagaaagaacaatacaacctgaacaaATTACAAAAACGTCTGCGTCGTAACGTGGGCGAAGCCATTGCTGACTTCAATATGATTGAAGAAGGCGATCGCATCATGGTTTGCCTCTCCGGGGGTAAAGAc                                                 <  8:924824‑M2/103‑1 (MQ=255)
                                                                                                   gtcgcaaaatcaagaaattagtaagaaagaacaatacaacctgaacaaATTACAAAAACGTCTGCGTCGTAACGTGGGCGAAGCCATTGCTGACTTCAATATGATTGAAGAAGGCGATCGCATCATGGTTTGCCTCTCCGGGGGTAAAGAc                                                 <  1:280717‑M2/103‑1 (MQ=255)
                                                                                                      gcaaaatcaagaaattagtaagaaagaacaatacaacctgaacaaATTACAAAAACGTCTGCGTCGTAACGTGGGCGAAGCCATTGCTGACTTCAATATGATTGAAGAAGGCGATCGCATCATGGTTTGCCTCTCCGGGGGTAAAGACAGc                                              >  6:771214‑M2/46‑151 (MQ=255)
                                                                                                       caaaatcaagaaattagtaagaaagaacaatacaacctgaacaaATTACAAAAACGTCTGCGTCGTAACGTGGGCGAAGGCATTGCTGACTTCAATATGATTGAAGAAGGCGATCGCATGATGGTTTGGCTCTCCGGGGGTAAAGACAGCt                                             >  4:43536‑M2/45‑151 (MQ=255)
                                                                                                        aaaatcaagaaattagtaagaaagaacaatacaacctgaacaaATTACAAAAACGTCTGCGTCGTAACGTGGGCGAAGCCATTGCTGACTTCAATATGATTGAAGAAGGCGATCGCATCATGGTTTGCCTCTCCGGGGGTAAAGACAGCt                                             >  7:443348‑M2/44‑150 (MQ=255)
                                                                                                             caagaaattagtaagaaagaacaatacaacctgaacaaATTACAAAAACGTCTGCGTCGTAACGTTGGCGAAGCCATTACTGACTTCAATATGATTGAAGAAGGCGATCGCATCATGGTTTGCATCTCCGGGGGTAAAGACAGCTATAcc                                        >  3:411924‑M2/39‑150 (MQ=255)
                                                                                                             caagaaattagtaagaaagaacaatacaacctgaacaaATTACAAAAACGTCTGCGTCGTAACGTGGGCGAAGCCATTGCTGACTTCAATATGATTGAAGAAGGCGATCGCATCATGGTTTGCCTCTCCGGGGGTAAAGACAGCTATACCa                                       <  8:490661‑M2/113‑1 (MQ=255)
                                                                                                             caagaaattagtaacaaagaacaatacaacctgaacaaATTACAAAAACGTCTGCGTCGTAACGTGGGCGAAGCCATTGCTGACTTCAATATGATTGAAGAAGGCGATCGCATCATGGTTTGCCTCTCCGGGGGTAAAGACAGCTATACCa                                       <  8:969886‑M2/113‑1 (MQ=255)
                                                                                                              aagaaattagtaagtaagaacaatacaacctgaacaaATTACAAAAACGTCTGCGTCGTAACGTGGGCGAAGCCATTGCTGACTTCAATATGATTGAAGAAGGCGATCGCATCATGGTTTGCCTCTCCGGGGGTAAAGACAGCTATACCAt                                      >  5:170018‑M2/38‑151 (MQ=255)
                                                                                                              aagaaattagtaagaaagaacaatagaacctgaacaaATTACAAAAACGTCTGCGTCGTAACGTGGGCGAAGCCATTGCTGACTTCAATATGATTGAAGAAGGCGATCGCATCATGGTTTGCCTCTCCGGGGGTAAAGACAGCTATACCAt                                      <  6:500872‑M2/114‑1 (MQ=255)
                                                                                                              aagaaattagtaagaaagaacaatacaacctgaacaaATTACAAAAACGTCTGCGTCGTAACGTGGGCGAAGCCATTGCTGACTTCAATATGATTGAAGAAGGCGATCGCATCATGGTTTGCCTCTCCGGGGGTAAAGACAGCTATACCAt                                      <  4:284720‑M2/114‑1 (MQ=255)
                                                                                                              aagaaattagtaagaaagaacaatacaacctgaacaaATTACAAAAACGTCTGCGTCGTAACGTGGGCGAAGCCATTGCTGACTTCAATATGATTGAAGAAGGCGATCGCATCATGGTTTGCCTCTCCGGGGGTAAAGACAGCTATACCAt                                      <  2:790676‑M2/114‑1 (MQ=255)
                                                                                                                gaaattagtaagaaagaacaatacaacctgaacaaATTACAAAAACGTCTGCGTCGTAACGTGGGCGAAGCCATTGCTGACTTCAATATGATTGAAGAAGGCGATCGCATCATGGTTTGCCTCTCCGGGGGTAAAGACAGCTATACCATGc                                    <  8:808427‑M2/116‑1 (MQ=255)
                                                                                                                gaaattagtaagaaagaacaatacaacctgaacaaATTACAAAAACGTCTGCGTCGTAACGTGGGCGAAGCCATTGCTGACTTCAATATGATTGAAGAAGGCGATCGCATCATGGTTTGCCTCTCCGGGGGTAAAGACAGCTATACCATGc                                    >  7:624418‑M2/36‑151 (MQ=255)
                                                                                                                 aaattagtaagaaagaacaatacaacctgaacaaATTACAAAAACGTCTGCGTCGTAACGTGGGCGAAGCCATTGCTGACTTCAATATGATTGAAGAAGGCGATCGCATCATGGTTTGCCTCTCCGGGGGTAAAGACAGCTATACCATGCt                                   <  3:99698‑M2/117‑1 (MQ=255)
                                                                                                                  aattatttacaaacaaAAATACAAACTGGACAAATTAAAAAAAACTGTGCGTCCTAAAGTGGGGGGATCCATTTGTTACTTGAAAATGATTTAATCAGGGGTAAGGATCATGGGTTTCCTGTCCGGGGGTAAAGACAGCTATACCATGCTg                                  <  1:921059/141‑1 (MQ=255)
                                                                                                                  aattagtaagaaagaacaatacaacctgaacaaATTACAAAAACGTCTGCGTCGTAACGTGGGCGAAGCCATTGCTGACTTCAATATGATTGAAGAAGGCGATCGCATCATGGTTTGCCTCTCCGGGGGTAAAGACAGCTATACCATGCTg                                  >  1:1046312‑M2/34‑151 (MQ=255)
                                                                                                                  aattagtaagaaagaacaatacaacctgaacaaATTACAAAAACGTCTGCGTCGTAACGTGGGCGAAGCCATTGCTGACTTCAATATGATTGAAGAAGGCGATCGCATCATGGTTTGCCTCTCCGGGGGTAAAGACAGCTATACCATGCTg                                  <  7:65956‑M2/118‑1 (MQ=255)
                                                                                                                   attagtaagaaagaacaatacaacctgaacaaATTACAAAAACGTCTGCGTCGTAACGTGGGCGAAGCCATTGCTGACTTCAATATGATTGAAGAAGGCGATCGCATCATGGTTTGCCTCTCCGGGGGTAAAGACAGCTATACCATGCTgg                                 <  3:863766‑M2/119‑1 (MQ=255)
                                                                                                                   attagtaagaaagaacaatacaacctgaacaaATTACAAAAACGTCTGCGTCGTAACGTGGGCGAAGCCATTGCTGACTTCAATATGATTGAAGAAGGCGATCGCATCATGGTTTGCCTCTCCGGGGGTAAAGACAGCTATACCATGCTgg                                 <  4:668157‑M2/119‑1 (MQ=255)
                                                                                                                      agtaagaaagaacaatacaacctgaacaaATTACAAAAACGTCTGCGTCGTAACGTGGGCGAAGCCATTGCTGACTTCAATATGATTGAAGAAGGCGATCGCATCATGGTTTGCCTCTCCGGGGGTAAAGACAGCTATACCATGCTGgag                               <  4:462844‑M2/121‑1 (MQ=255)
                                                                                                                         aagaaagaacaatacaacctgaacaaATTACAAAAACGTCTGCGTCGTAACGTGGGCGAAGCCATTGCTGACTTCAATATGATTGAAGAAGGCGATCGCATCATGGTTTGCCTCTCCGGGGGTAAAGACAGCTATACCATGCTGGAGAtt                            >  6:366652‑M2/27‑150 (MQ=255)
                                                                                                                            aaagaacaatacaacctgaacaaATTACAAAAACGTCTGCGTCGTAACGTGGGCGAAGCCATTGCTGACTTCAATATGATTGAAGAAGGCGATCGCATCATGGTTTGCCTCTCCGGGGGTAAAGACAGCTATACCATGCTGGAGATTCTgc                        <  7:597882‑M2/128‑1 (MQ=255)
                                                                                                                             aagaacaatacaacctgaacaaATTACAAAAACGTCTGCGTCGTAACGTGGGCGAAGCCATTGCTGACTTCAATATGATTGAAGAAGGCGATCGCATCATGGTTTGCCTCTCCGGGGGTAAAGACAGCTATACCATGCTGGAGATTCTgcg                       >  2:990806‑M2/23‑151 (MQ=255)
                                                                                                                             aagaacaatacaacctgaacaaATTACAAAAACGTCTGCGTCGTAACGTGGGCGAAGCCATTGCTGACTTCAATATGATTGAAGAAGGCGATCGCATCATGGTTTGCCTCTCCGGGGGTAAAGACAGCTATACCATGCTGGAGATTCTgcg                       <  6:1068115‑M2/129‑1 (MQ=255)
                                                                                                                                      acaacctgaacaaATTACAAAAACGTCTGCGTCGTAACGTGGGCGAAGCCATTGCTGACTTCAATATGATTGAAGAAGGCGATCGCATCATGGTTTGCCTCTCCGGGGGTAAAGACAGCTATACCATGCTGGAGATTCTGCGCAATTTgc               >  8:240254‑M2/14‑150 (MQ=255)
                                                                                                                                       caacctgaacaaATTACAAAAACGTCTGCGTCGTAACGTGGGCGAAGCCATTGCTGACTTCAATATGATTGAAGAAGGCGATCGCATCATGGTTTGCCTCTCCGGGGGTAAAGACAGCTATACCATGCTGGAGATTCTGCGCAATTTgc               >  1:555226‑M2/13‑149 (MQ=255)
                                                                                                                                        aacctgaacaaATTACAAAAACGTCTGCGTCGTAACGTGGGCGAAGCCATTGCTGACTTCAATATGATTGAAGAAGGCGATCGCATCATGGTTTGCCTCTCCGGGGGTAAAGACAGCTATACCATGCTGGAGATTCTGCGCAATTTgcagc            >  4:621643‑M2/12‑151 (MQ=255)
                                                                                                                                             gaacaaATTACAAAAACGTCTGCGTCGTAACGTGGGCGAAGCCATTGCTGACTTCAATATGATTGAAGAAGGCGATCGCATCATGGTTTGCCTCTCCGGGGGTAAAGACAGCTATACCATGCTGGAGATTCTGCGCAATTTGCAGCaaa         <  8:735994‑M2/143‑1 (MQ=255)
                                                                                                                                             gaacaaATTACAAAAACGTCTGCGTCGTAACGTGGGCGAAGCCATTGCTGACTTCAATATGATTGAAGAAGGCGATCGCATCATGGTTTGCCTCTCCGGGGGTAAAGACAGCTATACCATGCTGGAGATTCTGCGCAATTTGCAGCaaa         <  7:454502‑M2/143‑1 (MQ=255)
                                                                                                                                             gaacaaATTACAAAAACGTCTGCGTCGTAACGTGGGCGAAGCCATTGCTGACTTCAATATGATTGAAGAAGGCGATCGCATCATGGTTTGCCTCTCCGGGGGTAAAGACAGCTATACCATGCTGGAGATTCTGCGCAATTTGCAGCAAAgc       <  6:580765‑M2/145‑1 (MQ=255)
                                                                                                                                             aaaaaaaTTAAAAAACGGTCTGCGGCGTAAGGTGGCCTATGCCTTTGCTTACTGCAATATTATTGACGATGGCTACCGAATCATGTTTGCCTCTCCGGGGGTAAAGACAGCTATACCATGCTGGAGATTCTGCGCAATTTGCAGCAAAgcg      <  8:941771/147‑1 (MQ=255)
                                                                                                                                              aacaaATTACAAAAACGTCTGCGTCGTAACGTGGGCGAAGCCATTGCTGACTTCAATATGATTGAAGAAGGCGATCGCATCATGGTTTGCCTCTCCGGGGGTAAAGACAGCTATACCATGCTGGAGATTCTGCGCAATTTGCAGCAAAgcg      <  1:47744‑M2/146‑1 (MQ=255)
                                                                                                                                                caaATTACAAAAACGTCTGCGTCGTAACGTGGGCGAAGCCATTGCTGACTTCAATATGATTGAAGAAGGCGATCGCATCATGGTTTGCCTCTCCGGGGGTAAAGACAGCTATACCATGCTGGAGATTCTGCGCAATTTGCAGCAAAgcgcg    <  2:722488‑M2/148‑1 (MQ=255)
                                                                                                                                                 aaATTACAAAAACGTCTGCGTCGTAACGTGGGCGAAGCCATTGCTGACTTCAATATGATTGAAGAAGGCGATCGCATCATGGTTTGCCTCTCCGGGGGTAAAGACAGCTATACCATGCTGGAGATTCTGCGCAATTTGCAGCAAAgcgcgc   >  5:858132‑M2/3‑151 (MQ=255)
                                                                                                                                                   |                                                                                                                                                     
CATGAACGACGAACAGATAGCCATGTTGAATGCGCGGTTATCGTAGTTGCAAAGTTTGCCCCCAATTTGCCCCATTTAGTACCAGAGAACTGAAATAATGCAAGAAAATCAACAAATTACAAAGAAAGAACAATACAACCTGAACAAATTACAAAAACGTCTGCGTCGTAACGTGGGCGAAGCCATTGCTGACTTCAATATGATTGAAGAAGGCGATCGCATCATGGTTTGCCTCTCCGGGGGTAAAGACAGCTATACCATGCTGGAGATTCTGCGCAATTTGCAGCAAAGCGCGCC  >  DH1/2466433‑2466729

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.