Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*DH1936,2970AG36.5% 140.2 / 102.4 102intergenic (‑31/+3)ECDH1_RS04620/ECDH1_RS04625tRNA‑Met/tRNA‑Met
Reads supporting (aligned to +/- strand):  ref base A (53/8);  new base G (31/4);  total (87/15)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.41e-01

Only 100 of 106 total aligned reads displayed.

CTGCTTTTACTTCATCAAATTTGATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑TTTACTTCATCAAATTTTAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGGATGCGCACTATACTCCGCTCGCGTTTTCATGCAACCTTTTTTTTACCCCGATCACGGATTTGGC  >  DH1/936165‑936447
                                                                                                                                     |                                                                                                                                                      
cTGCTTTTACTTCATCAAATTTGATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCCAGTAATGC‑GATAATTCATCAAATTATAtttccttgacgggtactt                                                                                                                                      >  8:422928/1‑136 (MQ=14)
                                                        cTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑TTTTCTTGATGAAATTTTTATTGGTTg                                                                                                                                                >  5:1010950/1‑85 (MQ=14)
                                                        cTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑TTTACTTCATCAAATTTTAATTGGTTg                                                                                                                                                <  6:1009960/85‑1 (MQ=255)
                                                                tATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCCGGTACTCC‑TATACTTCTACAAAATTTTATTCGTTGCGGCGGAGTGATTAGCACCTACGGCCTTCGGGTTATGAGCCCGCAGAGCAAACAGGCTGCTCCCCCCCGAGTcc                                                                      >  7:690770/1‑151 (MQ=2)
                                                                           cgaGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑TTTACTTCATCAAATTTTAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGGATgcgcc                                                           >  7:427371/1‑150 (MQ=255)
                                                                                tACCAGGCTGCTCCACCCCGCGTCCCGGTAGGGG‑GTGACTTCAGCAATGTTTTATTGGTTGCGGGGGGCTGTTATGAACCGCCGCCCTTCGGCTTGTGATCCCGCAGAGCTACCACGCTGATCCACCCCGCGTCCGTCGATggtccctatc                                                      >  3:598812/1‑142 (MQ=9)
                                                                                tACCAGGCTGCTCCACCCCGCGTCACAGTAGTCG‑TTTACTTCATCAAATTTTAATTGGTTGCACGGGCAGGATTAGAACCTCCGACCTTAGGGTTATGATCCAGACGAGCTACCAGGCTCCTCCAGACATAGTCAGTGGATGAGCCCtat                                                       >  2:724794/1‑150 (MQ=9)
                                                                                       ctgctCCACCCCGCGTCACCGTACTGC‑TTTACTTCATCAAATTTTAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGGATGCGCACTCTACTCCGcg                                               >  6:761506/1‑150 (MQ=255)
                                                                                         gctCCACCCCGCGTCACCGTACTGC‑TTTACTTCATCAAATTTTAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGGATGCGCACTATACTCCGCTcg                                             >  6:651746/1‑151 (MQ=255)
                                                                                           tCCACCCCGCGTCACCGTACTGC‑TTTACTTCATCAAATTTTAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGGATGCGCACTATACTCCGCTcgcg                                           >  3:991399/1‑151 (MQ=255)
                                                                                           tCCACCCCGCGTCACCGTACTGC‑TTTACTTCATCAAATTTTAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGGATGCGCACTATACTCCGCTcgcg                                           >  5:614614/1‑151 (MQ=255)
                                                                                           tCCACCCCGCGTCACCGTACTGC‑TTTACTTCATCAAATTTTAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCACGCTGCACCACCACGAGTCAGTGGATGCGCACTATACTCCGCTcgcg                                           >  4:1042523/1‑151 (MQ=255)
                                                                                           tCCACCCCGCGTCACAGTACTGC‑TTTACTTCATCAAATTTTAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGACCGACGAGATACCAGGCTGCTCCACCCCGAGTCCGTGGATGCGCACTATACTCCGCTcgcg                                           >  4:1037496/1‑151 (MQ=255)
                                                                                            ccACCCCGCGTCACCGTACTGC‑TTTACTTCATCAAATTTTAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGGATGCGCACTATACTCCGCTCGCGt                                          >  1:508438/1‑151 (MQ=255)
                                                                                             cACCCCGCGTCACCGTACTGC‑TTTACTTCATCAAATTTTAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGGATGCGCACTATACTCCGCTCGCGtt                                         >  6:297769/1‑151 (MQ=255)
                                                                                             cACCCCGCGTCACCGTACTGC‑TTTACTTCATCAAATTTTAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGGATGCGCACTATACTCCGCTCGCGtt                                         >  5:550609/1‑151 (MQ=255)
                                                                                             cACCCCGCGTCACCGTACTGC‑TTTACTTCATCAAATTTTAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGGATGCGCACTATACTCAGCTCGCGtt                                         >  2:905689/1‑151 (MQ=255)
                                                                                              cccccGCGTCACCGTACTGC‑TTTACCTCAACAAAATTTAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGGATGCGCACTATACTCCGCTCGCGttt                                        <  3:758078/150‑1 (MQ=255)
                                                                                              aCCCCGCGTCACCGTACTGC‑TTTACTTCATCAAATTTTAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGGATGCGCACTATACTCCGCTCGCGttt                                        >  6:29935/1‑151 (MQ=255)
                                                                                               ccccGCGTCACCGTACTGC‑TTTTATTTATTAAATTTTTATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGGATGCGCACTATACTCCg                                                 <  4:372380/141‑1 (MQ=255)
                                                                                                    gctCACCGTACTGC‑TTTTCCTTAATAAAATTTGATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGGATGCGCACTATACTCCGCTCGCGTTTTCATGc                                  <  3:916668/149‑1 (MQ=17)
                                                                                                    cgTCACCGTACTGCTTTTACTTCATCAAA‑TTTGATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGGAAGCGCACTATACTCCGCTAGCGTTTTccttc                                  >  4:397668/1‑147 (MQ=14)
                                                                                                    cgTCACCGTACTGC‑TTTACTTCATCAAATTTTAATTGGTTGCGGGGGCCGGATTTGAACCGACGCCCTTCGGGTTATGATCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGGATGCGCACTATACTCCGCTCGCGTTTTCATGc                                  >  3:932506/1‑151 (MQ=255)
                                                                                                     gTCACCGTACTGCTTTTACTTCATCAAA‑TTTGATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGTAATCGAAGAATACTACGCTAGCGTTTTCATgg                                  >  6:715815/1‑149 (MQ=11)
                                                                                                     gTCACCGTACTGC‑TTTACTTCATCAAATTTTAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGGATGCGCACTATACTCCGCTCGCGTTTTCATGc                                  >  2:887402/1‑150 (MQ=255)
                                                                                                     gTCACCGTACTGC‑TTTACTTAATCAAATTTTAATTGGTTGCGGGGGCCGGATTTGAACAGCCGACCTTCGGGTTATTAGCCCGACGAGCTACAAGGCTGCTCCACCCCCCGTCCCAGGATGCGCACTATACTCCGCTCGCGTTTTCATGc                                  >  7:362056/1‑150 (MQ=18)
                                                                                                       cACCGTACTGCTTTTACTTCATCAAA‑TTTGATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGGATGCGCACTATACTACGCTAGCTTTTTCAttc                                  >  4:916022/1‑146 (MQ=14)
                                                                                                         ccGTACTGC‑TTTACTTCATCAAATTTTAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGGATGCGCACTATACTCCGCTCGCGTTTTCATGCAACCt                             >  5:467008/1‑151 (MQ=255)
                                                                                                         ccGTACTGC‑TTTACTTCATCAAATTTTAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGGATGCGCACTATACTCCGCTCGCGTTTTCATGCAACCt                             >  2:789058/1‑151 (MQ=255)
                                                                                                          cGTACTGCTTTTACTTCATCAAA‑TTTGATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCCGGGAAGCCAAGAATACTACGCTAGAGTTTTCATTCAACCtt                            >  6:860821/1‑151 (MQ=11)
                                                                                                          cGTACTGC‑TTTACTTCATCAAATTTTAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGGATGCGCACTATACTCCGCTCGCGTTTTCATGCAACCtt                            >  7:601429/1‑151 (MQ=255)
                                                                                                           gTACTGCTTTTACTTCATCAAA‑TTTGATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGGGGAGGCGGACTATACTCCGCTCGATTTTTCATGCACCCgtt                           >  7:451568/1‑151 (MQ=11)
                                                                                                           gTACTGCTTTTACTTCATCAAA‑TTTGATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCCTGGATGCGCACTATAc                                                     >  1:964467/1‑125 (MQ=11)
                                                                                                           gTACTGCTTTTAATTAATAAAATTTT‑ATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGGATGCGCACTATAc                                                     <  2:963916/125‑1 (MQ=14)
                                                                                                           gTACTGC‑TTTACTTCATCAAATTTTAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGGATGCGCACTATACTCCGCTCGCGTTTTCATGCAACCttt                           >  5:860341/1‑151 (MQ=255)
                                                                                                           gTACTGC‑TTTACTTCATCAAATTTTAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGGATGCGCACTATACTCCGCTCGCGTTTTCATGCAACCttt                           >  5:1064386/1‑151 (MQ=255)
                                                                                                            tACTGCTTTTACTTCATCAAA‑TTTGATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACAGGATGCGGAATATACTGCGATAGATTTTTCATTCCACCtttt                          >  6:570750/1‑151 (MQ=11)
                                                                                                            tACTGCTTTTACTTCATCAAA‑TTTGATTCGTTGCGGCGCACGCATTTGAACCGACGACCTTCGGGTTATGACCCCGACGAGCTACCAGCCTGCTCCACCCCGCGTCCCAGGAAGCCAAGTATACTACACTATAGAATTCATGCAAccgtac                          >  7:127707/1‑147 (MQ=9)
                                                                                                             aCTGC‑TTTACTTCATCAAATTTTAATTGGTTGCGGGGGCCGGATTTGACCCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGGATGCGCACTATACTCCGCTCGCGTTTTCATGCACCCttttt                         >  6:9334/1‑151 (MQ=255)
                                                                                                              cTGC‑TTTACTTCATCAAATTTTAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGGATGCGCACTATACTCCGCTCGCGTTTTCATGCAACCtttttt                        >  5:696954/1‑151 (MQ=255)
                                                                                                              agcgatgtACTTCAT‑AAAATTTGATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGGATGCGCACTATACTCCGCTCGCGTTTTCATGCAACCtttt                          <  1:939573/142‑1 (MQ=18)
                                                                                                               tgcttttACTTCATCAAA‑TTTGATTGGTTGCGGGGGCCGGGTTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGGATGGGAAATATACTCCGCTAGCTTTTTCATGCACCCtgttttt                       >  7:933001/5‑151 (MQ=14)
                                                                                                               tgcttttACTTCATCAAA‑TTTGATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGAGGATGCGCATTATACTCCGAGCGCGTATTGGTGCCACCtgagggt                       >  7:105711/5‑145 (MQ=11)
                                                                                                                gC‑TTTACTTCATCAAATTTTAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGGATGCGCACTATACTCCGCTCGCGTTTTCATGCAACCtttttttt                      >  6:941764/1‑151 (MQ=255)
                                                                                                                 cttttACTTCATCAAA‑TTTGATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGGATGCGGAGTCTACTCCGCTCGCGTTTTCATGCAAGCtttgtttt                      >  3:743284/3‑150 (MQ=17)
                                                                                                                 cttttACTTCATCAAA‑TTTGATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGGGGATTCGCACTATACTACGCTATCGTTTTCATGCAACCtttttttt                      >  6:976657/3‑150 (MQ=17)
                                                                                                                 cttttACTTCATCAAA‑TTTGATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCCTGGATGCCCACTATACAACGCTATAGTTTTCATTCAGCCttagttat                      >  2:784091/3‑144 (MQ=11)
                                                                                                                 cttttACTTCATCAAA‑TTTGATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCCGGGATGGGCACTATACTACGCTAGAGTTTTCATTCAGccgggtttatt                     >  6:600109/3‑142 (MQ=11)
                                                                                                                  gctcaaccgatctAAATTTGATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGGATGCGCACTATACTCCGCTCGCGTTTTCATGCAACCTTTTTTTTa                     <  1:726910/142‑1 (MQ=18)
                                                                                                                   tttATTTCATAAAATTTT‑ATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGGATGCGCACTATACTCCGCTCGCGTTTTCATGCAACCTTTTTTTTAc                    <  8:451011/150‑1 (MQ=255)
                                                                                                                   tttACTTCATCAAATTTTAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGGATGCGCACTATACTCCGCTCGCGTTTTCATGCAACCTTTTTTTTAc                    >  2:1078194/1‑151 (MQ=255)
                                                                                                                   tttACTTCATCAAA‑TTTGATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGGATGCGCAGTATACTCCGCTGGCGTTTTGATGCAACCTGTTTTTTAc                    >  3:755277/1‑150 (MQ=17)
                                                                                                                      aCTTCATCAAATTTTAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGGATGCGCACTATACTCCGCTCGCGTTTTCATGCAACCTTTTTTTTAcccc                 >  2:721922/1‑151 (MQ=255)
                                                                                                                      aCTTCATCAAATTTTAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGGATGCGCACTATACTCCGCTCGCGATTTCATGCAACCTTTTTTTTAcccc                 >  2:1009470/1‑151 (MQ=255)
                                                                                                                      aCTTCATCAAA‑TTTGATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGGATGCGCACTATACTACGCTAGAGTTTTCATTCAACCttttagataggaac                >  2:939093/1‑141 (MQ=17)
                                                                                                                       cTTCATCAAATTTTAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCAACCCCGCGTCCGTGGATGCGCACTATACTCCGCTCGCGTTTTCATGCAACCTTTTTTTTACCCCg                >  2:397457/1‑151 (MQ=255)
                                                                                                                        ttCATCAAA‑TTTGATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGGGGATGGGGAGTATACTGCGCTCGAGATTTCATTCAGccgtagtgttacca                  >  7:364965/1‑135 (MQ=11)
                                                                                                                        ttCATCAAA‑TTTGATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACTGGATTCCAACAATACTCCGATCTATTTTTCATGCAACCTTTATTTTAACACGa               >  8:731981/1‑150 (MQ=11)
                                                                                                                         tcatcaAATTTTAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGGATGCGCACTATACTCCGCTCGCGTTTTCATGCAACCTTTTTTTTACCCCGAt              >  4:702793/1‑151 (MQ=255)
                                                                                                                         agggtgttcaatAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGGATGCGGACTATACTCCGCTCGCGTTTTCCTGCACCCTTTTTTTTACCCCGAt              >  1:372442/12‑151 (MQ=18)
                                                                                                                         agggtgttcaatAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGGATGCGCACTATACTCCGCt                                               <  4:394569/107‑1 (MQ=255)
                                                                                                                          gggtgttctatAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGGATGCGCACTATACTCCGCTCGCGTTTTCATGCAACCTTTTTTTTACCCCGAt              <  6:996785/140‑1 (MQ=255)
                                                                                                                           cagctaatttGATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCACGCGTCCGTGGATGCGCACTATACTCCGCTCGCGTTTTCATGCAACCTTTTTTTTACCCCGATCa            <  1:241072/144‑1 (MQ=255)
                                                                                                                           attcatattttATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCGGTGGATGCGCACTATACTCCGCTCGCGTTTTCATGCAACCTTTTTTTTACCCCGATCa            <  8:105623/144‑1 (MQ=255)
                                                                                                                           atcaAA‑TTTGATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGAGGATGCGCTCTCTACTCCACTCGGCATTTCATGCAAGCTTTATTTTACCCAGATCAc           >  1:642578/1‑151 (MQ=14)
                                                                                                                            tcaAATTTTAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGGATGCGCACTATACTCCGCTCGCGTTTTCATGCAACCTTTTTTTTACCCCGATCAc           >  1:141871/1‑151 (MQ=255)
                                                                                                                            tcaAATTTTAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGGATGCGCACTATACTCCGCTCGCGTTTTCATGCAACCTTTTTTTTACCCCGATCAc           >  3:118048/1‑151 (MQ=255)
                                                                                                                            tcaAATTTTAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGGATGCGCACTATACTCCGCTCGCGTTTTCATGCAACCTTTTTTTTACCCCGATCAc           >  8:586745/1‑151 (MQ=255)
                                                                                                                            tcaAA‑TTTGATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCCTGGATGCCGACAATACTCCCAACGATATTTCATTCAACGTGTCTTATACCCACATCAcc          >  3:271638/1‑150 (MQ=2)
                                                                                                                            gtgttcaatAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGGATGCGCACTATACTACCCTCGCGTTTTCATGCAACCTTTTTTTTAACACGATCAc           >  4:76255/9‑151 (MQ=18)
                                                                                                                             caAATTTTAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGGATGCGCACTATACTCCGCTCGCGTTTTCATGCAACCTTTTTTTTACCCCGATCACg          >  5:774676/1‑151 (MQ=255)
                                                                                                                              caaatttGATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGGATGCGCACTATACTCCGATCGATTTTTCATGCACCCTGTTTTTTAACCCGATCAccg         >  1:271494/5‑149 (MQ=18)
                                                                                                                              caaatttGATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGGGGATGCCCAGTATACTCCGCTCTCGTTTTCCTGCAGCCTGGGTTTTAAGCCGATCAccg         >  1:19560/5‑149 (MQ=14)
                                                                                                                               ttctatAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGGATGCGCACTATACTCCGCTCGCGTTTTCATGCAACCTTTTTTTTACCCCGATCAc           <  2:948592/143‑1 (MQ=255)
                                                                                                                               ttcaatAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGGAt                                                                <  2:656804/90‑1 (MQ=14)
                                                                                                                               ttcaatAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGGAGGCGCACTATACTCCGCTCGCGTTTTCATGCACCCTTGATTTTACCCCGATCAc           >  1:949106/6‑148 (MQ=18)
                                                                                                                               aaatttGATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGGATGCGCACTATACTCCGCTCGCGTTTTCATGCAACCTTTTTTTTACCCCGATCACgg         >  6:883854/4‑150 (MQ=255)
                                                                                                                               aaatttGATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCCTGGATGCGCAGTATACTACGATCTAGTTTTCATGCAACCTTTTTTTTa                     >  2:726571/4‑138 (MQ=17)
                                                                                                                               aaTTTTAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGGATGCGCACTATACTCCGCTCGCGTTTTCATGCAACCTTTTTTTTACCCCGATCACgg         >  1:383050/1‑150 (MQ=255)
                                                                                                                               aaTTTTAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGGATGCGCACTATACTCCGCTCGCGTTTTCATGCAACCTTTTTTTTACCCCGATCACgg         >  1:1020445/1‑150 (MQ=255)
                                                                                                                                tcaatAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGGATGCGCACTATACTCCGCTCGCGTTTTCATGCAACCTTTTTTTTACCCCGATCACGGa        <  6:30146/146‑1 (MQ=255)
                                                                                                                                aatttGATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGGATGCGCACTATACTCCGCTCGCGTTTTCATGCAACCTTTTTTTTACCAAGATCACGCAt       >  7:87362/3‑151 (MQ=255)
                                                                                                                                aatttGATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGGATGCGCACTATACTCCGCACGAGTTTTCATGCAACCTTTGTTTTACCACGAGCAcccat       >  6:558088/3‑147 (MQ=18)
                                                                                                                                aatttGATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACAGGAAGCGCAGTATACTACAAAATATAATTCATTCAACCTTTATTTTACCCAGATCaggcat       >  2:536519/3‑146 (MQ=2)
                                                                                                                                aatttGATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCACGCGTCCGAGGAATCGAAAAATACTACTCTCGATTTTTCATTCAACCTTTATTTTAACCAGATCaacat        >  2:240755/3‑146 (MQ=14)
                                                                                                                                aTTTTAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGGATGCGCACTATACTCCGCTCGCGTTTTCATGCAACCTTTTTTTTACCCCGATCACGGAt       >  2:485128/1‑151 (MQ=255)
                                                                                                                                 ttttAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCCCCCCGCGTCCGTGGATGCGCACTATACTCCGCTCGCGTTTTCTTGCAACCTTTTTTTTACCCCGATCACGGAtt      >  3:380870/1‑151 (MQ=255)
                                                                                                                                 ttttAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGGATGCGCACTATACTCCGCTCGCGTTTTCATGCAACCTTTTTTTTACCCCGATCACGGAtt      >  7:189235/1‑151 (MQ=255)
                                                                                                                                 caatAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGGGGATGCGCACTATACTCCGCTCGCGTTTTCATGCAACCTTTTTTTTACCCCGATCACCGAtt      >  4:239512/4‑151 (MQ=255)
                                                                                                                                 atatAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGGATGCGCACTATACTCCGCTCGCGTTTTCATGCAACCTTTTTTTTACCCCGATCACGGAtt      <  7:603311/148‑1 (MQ=255)
                                                                                                                                  aatAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGGATGCGCAGTATACTCCGCTATCGTTTTCATGCAACCTTTTTTTTACGCCGATCACCGAttt     >  1:1040567/3‑151 (MQ=21)
                                                                                                                                   ttAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGCCGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGGATGCGCACTATACTCCGCTCGCGTTTTCATGCAACCTTTTTTTTACCCCGATCACGGATTTg    >  1:140324/1‑151 (MQ=255)
                                                                                                                                   ttAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGGATGCGCACTATACTCCGCTCGCGTTTTCATGCAACCTTTTTTTTACCCCGATCACGGATTTg    >  7:18386/1‑151 (MQ=255)
                                                                                                                                   ttAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGGATGCGCACTATACTCCGCTCGCGTTTTCATGCAACCTTTTTTTTACCCCGATCACGGATTTg    >  5:193977/1‑151 (MQ=255)
                                                                                                                                    tAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGGATGCGCACTATACTCCGCTCGCGTTTTCATGCAACCTTTTTTTTACCCCGATCACGGAtttcg   >  8:238368/1‑149 (MQ=255)
                                                                                                                                    tAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGGATGCGCACTATACTCCGCTCGCGTTTTCATGCAACCTTTTTTTTACCCCGATCACGGATTTgg   >  5:399627/1‑151 (MQ=255)
                                                                                                                                    tAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGGATGCGCACTATACTCCGCTCGCGTTTTCATGCAACCATTTTTTTACCCCGATCACGGATTTgg   >  8:623475/1‑151 (MQ=255)
                                                                                                                                     aaTTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGGATGCGCACTATACTCCGCTcgc                                            >  6:443123/1‑109 (MQ=255)
                                                                                                                                     aaTTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGGATGCGCACTATACTCCGCTcgc                                            <  5:443832/109‑1 (MQ=255)
                                                                                                                                     aaTTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGGATGCGCACTATACTCCGCTCGCGTTTTCATGCACCCTTTTTTTTACCCCGATCACGGATTTGGc  >  4:969262/1‑151 (MQ=255)
                                                                                                                                     |                                                                                                                                                      
CTGCTTTTACTTCATCAAATTTGATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑TTTACTTCATCAAATTTTAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGGATGCGCACTATACTCCGCTCGCGTTTTCATGCAACCTTTTTTTTACCCCGATCACGGATTTGGC  >  DH1/936165‑936447

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑