Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*DH12,169,7200CG24.5% 107.4 / 14.6 97E614Q (GAA→CAA) rsxCelectron transporter RsxC
Reads supporting (aligned to +/- strand):  ref base C (43/28);  new base G (18/5);  total (63/34)
Fisher's exact test for biased strand distribution p-value = 1.40e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 103 total aligned reads displayed.

CTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTG‑GCACGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTC‑TTCT‑GGTTCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCACGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGTTCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCGCG  >  DH1/2169570‑2169867
                                                                                                                                                       |                                                                                                                                                     
ccgtGGCTCGGGCAATAGCGGCTTCTAGTGCGGCTTTGCGCGGAGCGACCTGGTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTG‑GCGCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGttc                                                                                                                                                       <  5:958964/148‑1 (MQ=14)
  ttcgcgagggCAATAGCCGCGTCCACTGCCGGTTTGCGCTGATCTATCTGTTGTTCTGGCTCGGCATTAGCCTGGTGCTGTGCCTGCTTGCGTGCTTTG‑GCTCGGGCAATAGCGGCTTCTACGGCGGCTTTGCGCGGATCGACCTGttc                                                                                                                                                       <  2:625367/142‑1 (MQ=14)
   tccctcgcccaagcgCGGCCTCGCCTGCCGCTTTGCGCGGATCTACCTGTTCTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTG‑GCTCGTGCAATAGCTGCTTCGACGGCGGCTTTGCGCGGATCGACCTGttc‑tt                                                                                                                                                    <  4:168751/136‑1 (MQ=11)
   tGGCGCGGGCACGCGCGGCTTGGACGGCAGCCGTGGGCTGATCCCAGCGTTCTTCTGGCTCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTG‑GCACGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGttc‑tt                                                                                                                                                    <  5:608636/150‑1 (MQ=11)
     gcgcGGGCAATAGCCGCGGCAACTGCGGCTTTGCGCGGATCTACCTGTTGTTCTGGCTCGGCATTAGCCTGGTGCTGTTCCAGCTTGCGTGCTTTG‑GCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTtc‑ttct                                                                                                                                                  <  2:1005225/147‑1 (MQ=11)
     gCTCGGGCAATAGCGGCTTCGAGGGCGGCTGAGCGCGGATCGCCCGGTTGCTCTGGCTCGGGATTAGCCGGTTGCTGTTCCAGCTTGCGGGCTTTG‑GCACGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTC‑TTCT‑g                                                                                                                                                <  3:156618/151‑1 (MQ=14)
      cgcGGGCAATAGCCGCGTCCACGGCCGCTTTGCGCGGATCCACCTGTTGTTCTGGCGCGGCATTCGCCGGTGGCCGGTCCAGCTTTCGGGCGTTG‑GCTCGGGCAATAGCGGCTTCCACGGCGGCTTTGCGCGGATCGACCTGTTC‑TTCT‑gg                                                                                                                                               <  5:15173/149‑1 (MQ=11)
       gcGGGCAATAGCCGCGTCAACGGCCGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCGGCATTAGCCTGTTGCTGTTGAAGCTTGCTTGCTTTT‑GCTCGGGCAATAGCGGCTTCTACTGCGGCTTTGCGCGGATCGACCTGTTC‑TTCT‑GGt                                                                                                                                              <  8:378585/150‑1 (MQ=11)
        cGGGCAATAGCCGCTTCCACGGCCGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTG‑GCACGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTC‑TTCT‑gg                                                                                                                                               <  7:516703/149‑1 (MQ=255)
          ggCAATAGCTGCTTCAACTGCCGCTTTGCGCGGAGCTACCTCTTGTTCTGGATCCGCATTAGCCTGTTGCGGTTCCAGCTTGCGTGCTTTC‑GCTCGGGCAATAGCGGCTTCTACTGCCGCTTTGCGCGGATCGACCTGTTC‑TTCT‑GGTTcc                                                                                                                                           <  8:733571/151‑1 (MQ=11)
           gcattttgcgCTTCTCCGGCTTCTTTTCGCTGATCGACGTGTTGTTGTGTTTGTGCATTTGCCTGTTGCTGGTCGTGTTTTTGTGCTTTT‑GCTCGGGCAATAGCGGCTTGTAGTGCGGCTTTGCGCGGATCGACCTGTTC‑TTCT‑GGTTCCg                                                                                                                                          <  6:679653/142‑1 (MQ=2)
            ccatccccgCTTCCACCGCCGCTTTGCGCTTATCTAAATTGTGTTGTGGACCCGCATTAGCCTGTTGCGGTTCCAGCTTGCTTGCTTTC‑TCTAGGGCAATAGCCGCTGCTACTGCGGCTTTGCGCGGATCGACCTGTTC‑TTCT‑GGTTCCGc                                                                                                                                         <  4:142292/143‑1 (MQ=2)
                 gcggcgTCCACGGCGTGTTTGCGCGGATACACCTGTTTTTCTGTCCACGAATCTGGTGGTTGCTGGGCGTGGTTGTTGGCTTGT‑GCGCGGGCAATAGCGGCGTCTACTGCGGCTTTGCGCGGATCTACCTGTTC‑TTCT‑GGTTCCGCATTa                                                                                                                                     <  8:672367/150‑1 (MQ=255)
                             gcggcTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTG‑GCACGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTC‑TTCT‑GGTTCCGCATTAGCCTGTTGCTGtt                                                                                                                        >  4:535888/1‑151 (MQ=40)
                                 cTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTG‑GCACGGGCTATAGCGGCTTCGACGGCAGATTTGCGTGGATCACCCACTTC‑TTCT‑GCTTCCTTAGTAGCCTGAAGGTGTTcc                                                                                                                      >  7:394965/1‑149 (MQ=14)
                                  tttGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTG‑GCCCGGGCGATAGCTGCTTCGACGGCGGGTTTGCGGGGATCCCCAACGTT‑TTCT‑GGTTCCTTAGTATCCTGATGATGTTCCAgg                                                                                                                   >  3:807043/1‑150 (MQ=14)
                                   ttGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGAGCTTTG‑GCACGGGCAATAGCGGCTTCCACGGCGGGTTTCCGCGGATCGCCAACTGT‑TTCT‑GGGTCCGGAGTAGCCTGATGTTGTGCCacg                                                                                                                   >  1:220210/1‑148 (MQ=11)
                                         ggatctccgtgttgaGCTGCCTCCGGACTAGCCGGCTGCTGATCGCGCTTTGTTGCGTTG‑GCTCGGGCAATAGCCGCGGCTACGGCCGCTTTGCGCGGATCGACCTGTTC‑TTCT‑GGTTCCGCATTAGCCTGTTGCTGTTCCAGCTTgcgcg                                                                                                            <  7:952816/142‑1 (MQ=2)
                                          gATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTG‑GCACGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGCCCTGTTC‑TTCT‑GGGTCCGGATTATGCTGTTGCTGTTCCAGCTTgcgagg                                                                                                           >  7:829839/1‑148 (MQ=14)
                                           aTCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTG‑GCACGGGCAATAGCTGCTTCGACGGCGGGTTTGCGAGGATCGCCATCGTG‑TGCT‑GCGTCCGGAGTAGCCTGTTGCTGTTCCAGCTTgcgccgt                                                                                                          >  3:300733/1‑148 (MQ=11)
                                           aTCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGGGCTTTG‑GCGCGGGCAATAGCTGCTTCAACGGCAGCTGTGAACCGAACCAGGAGGAC‑ATCG‑GGTAACTCAGTAGCATGTTGCTGTTCCCGCTTGCGCGCt                                                                                                          >  3:607454/1‑151 (MQ=2)
                                           aTCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGAGCTTTG‑GCACGGGCAATAGCGGCTTCGACGGCAGGTTTACGAGGATCGACCTCTTG‑TTCT‑GCTTCCTAATTATCCTGATGATCTTCCAGGTTccgacat                                                                                                          >  6:224074/1‑147 (MQ=11)
                                              gACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTG‑GCACGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACATGTTG‑TTCT‑GGTTCGGCATTATCCTGTTGCTGTTCCAGCTTGCGCCCtttt                                                                                                       >  7:5678/1‑150 (MQ=255)
                                                 ccggtcgtCTGGCTCGTGATTAGCCGGGTGCTGGTCGCGCTTGCGGGCTCTGCGCA‑GGGCAATCCCGGCATAGTCGGCCGCTTCGGTCGTATCGACCTGTTG‑TTCT‑GGCTCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGcg                                                                                                    <  5:641422/144‑2 (MQ=2)
                                                 cTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTG‑GCCCGGGCAATAGCTGCTTCGACGGCGGGTTTGCGGGGATCGCCCACTTG‑TTCT‑GGTTCCTGATTATCCTGTTGATGTTCCAGCttcccacatttgtgc                                                                                                    >  5:1022531/1‑138 (MQ=11)
                                                 cTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGAGCTTTG‑GCGCGGGAAATAGCAACATCGACGTCTTCGGTAAGCGTGTCGACCGCTTG‑TTAT‑GTTTCCGGGTTAGCCGGTTGATTTTAAAACTTGCGCGCGTGGGcg                                                                                                    >  4:904487/1‑150 (MQ=2)
                                                   ggtgttCTGGCTCGGCATTAGCCTTGTGCTGGTCGTGGTTGGGGGCCTTC‑GCGCGGGCAATAGCGGCTGCGACGGCGGCTTTGCGCGGATCGACCTGTTC‑TTCT‑GGTTCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCACg                                                                                                  <  7:726215/149‑1 (MQ=14)
                                                    ccccccccccTCCGCCTTCGCCGGGTGCTGTTCCAGCTTGCGTGCTTTG‑GCCCGGGCAATAGCCGCTTCTACGGCGGGATTGCAGGTATC‑ACCGGTGCGCTCC‑GGATCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCACgg                                                                                                 <  1:457718/142‑1 (MQ=2)
                                                      gttCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTG‑GCCCGGGCGATAGCGGCTTCCACGGCGGGTTTGCGGGGATCGGCCTCGTG‑TTCT‑GGTTCGGGAGTTGCCTGTTGGTGTTCCTGTTTgcgtccggggtgcggtgt                                                                                               >  1:772249/1‑136 (MQ=2)
                                                      gttCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTG‑GCACGGGCAATAGCGGCTTCGACGGCGGGTTTGCGAGGATCGGCCTGTTG‑TTCT‑GGTTCCTGATTTTCCTGTTGGTGTTCCTGATTGCGGGGTTTgggcggggg                                                                                               >  7:696489/1‑144 (MQ=11)
                                                         cTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTG‑GCACGGGCAATAGCTGCTTCGACGGCGGGTTTGCGGGGATCGGCCAGGTG‑TTCT‑GGTTCGGGATTAGCCTGTTGGTGTTCCAGCTTGCGCGCGTTGGCCCGTGCAAt                                                                                            >  7:821677/1‑151 (MQ=11)
                                                         cTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTG‑GCACGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGTCCTGTTG‑TTCT‑GCTTCGGCATTAGCCTGTTGCTGTTCCAGCTTCCGCGGTTTGGCCCGGGCact                                                                                            >  7:367385/1‑149 (MQ=11)
                                                          tGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTG‑GCACGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTG‑TTCT‑GGTTCCGGATTAGCCTGTTGGTGTTCCAGCTTGCGCGGTTTGGCCGGGGCAAtt                                                                                           >  3:416423/1‑150 (MQ=11)
                                                             cTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTG‑GCACGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTC‑TTCT‑GGTTCCGGATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCCCGGGAAATAGct                                                                                        >  7:336341/1‑150 (MQ=255)
                                                                  cATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTG‑GCACGGGCAATAGCGGCTTCGACGGCGGGTTTGCGCGGATCGCCCTGGTG‑TTCT‑GGTTCGGGATTAGCGTGTTGGGGTTCGAGGTAGCTCGCTTTGGCCCGGGGAATAGCGGCTTc                                                                                   >  3:313046/1‑151 (MQ=11)
                                                                   aTTAGCCTGTTGCTGTTGCATCTTGGGTGCTTTG‑TCTCTTTCAATAGACGATGCGATTGCGTGGTTGCGCGGATCTACCTGTTC‑TTCT‑GGTTCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCACGGGCAATAGCGGCTTCg                                                                                  <  8:42053/151‑1 (MQ=14)
                                                                   aTTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTG‑GCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTC‑TTCT‑GGCTCCGCATTAGCCTGTTGCTGTTCGGCAGTGCGCGCGTGGGCACTGGcgtgaggggggtgc                                                                                  >  7:996830/1‑138 (MQ=14)
                                                                     tAGCCTGTTTCTGTTCCAGCGTGCGAGCGTTC‑GCACGGCCTCTACCGCCATCGACGGCGTCCTTGCGCGGATCGAGATCTTC‑TTCT‑GGCTCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCACGGGCAATAGCGGCTTCGa                                                                                 <  8:775088/150‑1 (MQ=14)
                                                                     tAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTG‑GCACGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTC‑TTCT‑GGTTCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCACGGGCAATAGCGGCTTCgcc                                                                                >  5:1032324/1‑149 (MQ=255)
                                                                      aGCCTGTTGCTTTTCGAGCGTGCGGGCTGTG‑GCTCGGGCAATAGCGGCGGCGTGGGCGGCTTTGCGCGGTGCGAGCTGGCG‑ATCT‑GGTTCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCACGGGCAATAGCGGCTTCGAcg                                                                               <  3:932558/151‑1 (MQ=11)
                                                                      aGCCTGTTGCTGTTCCAGCTTGCGTGCTTTG‑GCACGGGCAATAGCTGCTTCCACGGCCGGTTTGCGAGGATCGACATGTTG‑TTCT‑GGTTCCTCATTATCCTGATGATGTTCCAGATTCCGAGTTTTTTCACGTTGAATAGCTGCTTctgct                                                                               >  4:795799/1‑147 (MQ=2)
                                                                      aGCCGGTTGCGGTGCCCGCTTGCCGGCTTTG‑CCGCGGGCAATCGCGGCGTCGCGGGGGGCTTTCCGCGGTTCTACCTGTTC‑TTCT‑GGTTCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGCGC‑TTGGCACGGGCAATAGCGGCTTCGAcg                                                                               <  7:348149/150‑1 (MQ=11)
                                                                             ggCTGGTCCAGCTTGCGTGCTTTG‑GCGCGGGCAATAGCGGCGTCGACGGCTGCTTCGCGCGGAGCGCCCTGGTG‑TGCT‑GGGGGCGCCGTAGCGTGTTGCTGTTCCAGCTTGCGCGCTTTGGCACGGGCAATAGCGGCTTCGACGGCGGCtt                                                                        <  1:326636/150‑1 (MQ=14)
                                                                             agctgtgcgctgctGCGCGCCTTG‑GCGCGGGCAATAGCGGCTTCTACGGCGGCTTTGCGCGGATCTACCTGTTC‑TTCT‑GGTTCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCACGGGCAATAGCGGCTTCGACGGCGGCt                                                                         <  3:295496/137‑1 (MQ=11)
                                                                              gCTGTTCCAGCTTGCGTGCTTTG‑GCACGGGTAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACATGTTC‑TTCT‑GGTTCCGCATTAGCCTGTTGCTGTTCCAGATTGCGCGCTATGGCCCGGGGAATCCCGGCATCAACGGCGGGttt                                                                       >  5:712990/1‑151 (MQ=14)
                                                                              cccgTTCCAGCTTTTTTTTTTTG‑CCACGGGCAATAGCGTCTTCTACCGAGGCTTTGAGAGTATTTACCTCCTC‑TACTCTCTTCCG‑ATCAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCACGGGCAATAGCGGCTTCGACGGCGGCttt                                                                       <  2:694290/148‑1 (MQ=2)
                                                                                 gagggccgacgCGTGCTCTG‑GCGCGCTCAATAGCCGCGGCCACTGCCGCTTTGCGCGGATCCACCTGTTC‑TTCT‑GGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCCCGGGCAATAGCGGCTTCGACGGCGGCTTTgcg                                                                    <  1:829590/141‑1 (MQ=11)
                                                                                     cAGCTTGCGTGCTTTG‑GCACGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTG‑TTCT‑GGTTCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGTCCCGGGCAATAGCTGCTTCGACGGCTGGTTTTCGAggt                                                                >  7:18220/1‑150 (MQ=11)
                                                                                      aGCTTGCGTGCTTTG‑GCACGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTCTTG‑TTCT‑GCTTCCGGATTAGACTGTTGCTGTGCCAGCTTGCGCCCTTTCCCTCGGGCGATAGCGGCTTCGACGGCGGTTTTtcgttgat                                                               >  3:913983/1‑146 (MQ=11)
                                                                                         ttGCGTGCTTTG‑GCACGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTC‑TTCT‑GGTTCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCACGGGCAATAGCTGCTTCGACGGCTGGTTTgcggcgctcg                                                             >  3:517905/1‑143 (MQ=14)
                                                                                            cGTGCTTTG‑GCACGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTC‑TTCT‑GGTTCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGCGATTTTGCACGTGAAATAGCTGCTTCTCCTGCAGTTTTTCGAGGATctccc                                                          >  8:502999/1‑146 (MQ=11)
                                                                                                         cGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTG‑TTCT‑GGTTCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCGCGGGAAATAGCTGCTTCTACGGCAGATTTTCGAGGATCCACCTGTGGTTCTGCtt                                             >  3:93448/1‑151 (MQ=11)
                                                                                                           cccacccgcgcCTTCGACGGCCGCTTTGCTCTTATCTACATGTTC‑TGCT‑GCCTCCGGATTAGTACCTTGCTGATCACTCTTTTGCGCTTTCGGACGGGCAATCGAGCTTTCGACGGCTGCTTTGCGCGGATCGACCTGTTCTTCTGGTTcc                                           <  4:656268/144‑1 (MQ=2)
                                                                                                             cAATAGCGGCTTCGACGGCTGCTTTGCGAGGATCGACCTGTTG‑TTCT‑GGATCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGTTCCGc                                         <  5:303598/151‑1 (MQ=255)
                                                                                                              aaTAGCGGCTTCGACGGCGGCTTTGCGCGGATCGCCCTGTTC‑TTCT‑GGTTCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCGCGGGCGATAGCTGCTTCGACGGCAGGTTTCCGCGGATCCACCTCTGGTTCTgcgtcctg                                         >  3:215174/1‑143 (MQ=11)
                                                                                                               aTAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTC‑TTCT‑GGTTCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCCCGGGCCATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGGCCAGTTGTTCTGGGTCCGGAt                                       >  3:695814/1‑151 (MQ=14)
                                                                                                                 cgcgcgctccaccgcggcTGTGCGCCGAGCGACCTGTTG‑TTCT‑GGTTCCGCATTAGCCTGTTGCGGCTCTTGTTTGGACTGTCTGGCTTTGACACTTGGGGGCTGGCCCGCTGCTTTGCGCGGATCGACCTGTTGTTCTGGTTCCGCATTa                                     <  7:724246/138‑1 (MQ=9)
                                                                                                                 aGCGGCTTCTACTGCCTCTTTGTGCTGATCTAGCTTTTC‑TTCT‑TGTTCCGAATTATCCTGTTGCTGTTCGCGTTTTATGGCTTTTGCTCGGGCAATAGCGGCTTCTACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGTTCCGCATTa                                     <  2:254644/151‑1 (MQ=2)
                                                                                                                 aGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTC‑TTCT‑GGTTCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCCCGGGCAATAGCTGCTTCTACGGCAGTTTTTCGCGGATCCACCTGGGGTTCTGGTTccttattt                                     >  5:710153/1‑145 (MQ=11)
                                                                                                                  gCGGGTTCGACCGCGGATTTGCGGGTATCGATCGTCGA‑CTCT‑GGTGCGTTATTAGCCGGTTGCTGTTCCAGCTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGTTCCGCATTAg                                    <  2:509659/151‑1 (MQ=11)
                                                                                                                  cccgcgtCGACGGCTGCTTTGCTCTGATCTACGTGTTC‑TTCT‑GCGTCCGAATTAGGCTTTTTCTGTTCGAGCTTGCTCGCTTTGGCACGGTCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGTTCCGCATTAg                                    <  8:769033/145‑1 (MQ=14)
                                                                                                                   cgtctgggACCGCCGCTTTTCGCTGATCGACCTCTTC‑TTCT‑TTTCCCTAAATTCCGGGTTTCGGATCGAGCTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGTTCCGCATTAg                                    <  8:115441/143‑1 (MQ=2)
                                                                                                                    ggCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTG‑TTCT‑GGTTCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCGCGGGCCATAGCGGCTACGACGGCAGTTTTACGCCGATCATCCTGGGGTTCTGGGTCCTGATTATcc                                  >  8:1003179/1‑151 (MQ=11)
                                                                                                                     gcggcGACGGCGGCTTTGCGCGGATCGACCTGTTC‑TTCT‑GGCTCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGAGCTTTGGCACGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGTTCCGCATTAGCCt                                 <  3:536447/147‑1 (MQ=16)
                                                                                                                       ttCGACGGCGGCTTTGCGCGGATCGACCTGTTG‑TTCT‑GGTTCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCCCGGGCAATAGCTGCTTCGACGGCAGATTTACGAGGATCAACCTCTTTTGCTGGGTCCGGATTATCCTGt                               >  8:1061588/1‑151 (MQ=11)
                                                                                                                       ttCGACGGCGGCTTTGCGCGGATCGACCTGTTC‑TTCT‑GGTTCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGATTTGCGAGGATCACCCTCTGGTTCTGGTTCCTAATTATCCTGt                               >  8:360415/1‑151 (MQ=14)
                                                                                                                          gACGGCGGCTTTGCGCGGATCGACCTGTTC‑TTCT‑GGTTCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCACGGGCAATAGCTGCTTCGACGGCGGGTTTGCGAGGATCGCCCTCTTGTTCTGCTTCCGAATTAGCCTGTTgg                            >  6:135055/1‑150 (MQ=14)
                                                                                                                           acttcggcTTTGCGCGGATCAACCTGTTC‑TACT‑GTCACGGGATTAGGCTGTTGCTCCGCCAGCTTTCGCGCTTTTGCGCGGGCAATAGCGGCTTCTACTGCCGCTTTGCGCGGATCGACCTGTTGTTCTGGTTCCGCATTAGCCTGtt                              <  3:991841/144‑1 (MQ=11)
                                                                                                                             ggcggcTTTGCGCGGATCGACCTGTTC‑TTCT‑GGTTCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCGCGGGCGATAGCTGCTTCGACGGCGGCTTTGCGAGGATCGCCATCTTTTTCTGGGTCGGGAGTATCCTGATGATGt                         >  3:600741/1‑151 (MQ=11)
                                                                                                                              gccgcgcggcgcGGAGCCCCCGGTTC‑TTCT‑TGTTCGTCATTAGCCTGTTGCTGATCCCGGATGCTCGGGAGTGACCGGTGATCAGAGGCGTCGTCTTCGGATCTGCGCGGATCTACCTGTTGTTCTGGTTCCGCATTAGCCTGTTGCTGtt                        <  3:792720/143‑1 (MQ=2)
                                                                                                                              cccgcgctGCGCGGAGCCACCTGTTC‑TTCT‑GGTTCCGCATTAGCCTGGTGCTGTTCCCGCTTGCTCGCTTTGGAACGGTCAATAGCGGCGTCGACGTCGGATTTGCGCGGATCGACCTGTTGTTCTGGTTCCGCATTAGCCTGTTGCTGtt                        <  3:708289/144‑1 (MQ=14)
                                                                                                                               cggcTTTGCGCGGATCGACCTGTTC‑TTCT‑GGTTCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCTCGGGCTATAGCGGCTTCAACGGCAGCTTTACGAGGATCAGCAACTTGTGCTGGGTCGGCATAACCCTTTAGCTGtt                        >  6:1026284/1‑150 (MQ=11)
                                                                                                                               cggcTTTGCGCGGATCGACCTGTTC‑TTCT‑GGTTCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCACGGGCAATAGCTGCTTCGACGGCGGGTTTGCGCGGATCGCCCTGTTGTTCTGGTTCCGCAGTATCCTGTTGCTCTTc                       >  5:531028/1‑151 (MQ=14)
                                                                                                                               cggcTTTGCGCGGATCGACCTGTTC‑TTCT‑GGTTCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCACGGGCAATAGCTGCTTCGACGGCGGGTTTGCGAGGATCGGCCTCTTGTTCTGCTTCGTCATTATGCTGTTGGTCTTc                       >  5:572997/1‑151 (MQ=14)
                                                                                                                                ggcTTTGCGCGGATCGACCTGTTC‑TTCT‑GGTTCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCCCGGGCAATAGCGGCTTCGACGGCCGCTTTGCGCGGATCCCCCTGGTGTTCTGGTTCCGCATTAGCCTGGTGCTGTGcc                      >  1:229647/1‑151 (MQ=14)
                                                                                                                                ggcCTTGCGCGGCTCGACCTGTTC‑TTCT‑GGCTCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCACGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGTTCCGCATTAGCCTGTTGCTGTTcc                      <  4:359375/151‑1 (MQ=255)
                                                                                                                                 gcTTTGCGCGGATCAACCTGTTC‑TTCT‑GGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGAGCTTTGGCACGGGCAATAGCGGCt                                                                                     >  8:183432/1‑87 (MQ=11)
                                                                                                                                     tGCGCGGATCGACCTGTTC‑TTCT‑GGTTCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCACGGGCAATAGCTGCTTCAACGGCGGGTTTGCGAGGATCGGCCTCTGTTTCTGCTTCGGGATTATCCTGTTGGTGTTCCAGGtt                 >  8:321470/1‑151 (MQ=14)
                                                                                                                                       cgcgGATCGACCTGTTC‑TTCT‑GGTTCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCGCGGGCGATAGCTGCTTCGACGGCGGGTTTTCGAGGATCGCCATCTTGTTCTGGTTCCTAATTTTGCTGTTGATCTTCCAGCttcc               >  1:639260/1‑149 (MQ=14)
                                                                                                                                       cgcgGATCGACCTGTTC‑TTCT‑GGTTCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCACGGGCAATAGCTGCTTCAACGGCAGATTTACGAGGATCAACAACTTTTTCTGCTTCCTAATTATCCTGATGATCTTCCAGAttcc               >  4:982149/1‑149 (MQ=0)
                                                                                                                                       cgcgGATCGACCTGTTC‑TTCT‑GGTTCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCACGGGCAATAGCGGCTTCGACGGCGGCTTTACGAGGATCCACCAGTGGTTCTCGTTCCGCATTATCCTGTTGATGTTACAGCTTgc               >  2:361713/1‑151 (MQ=14)
                                                                                                                                        gcgGATCGACCTGTTC‑TTCT‑GGTTCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCACGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGCCCTCTTGTTCTGCTTCCGCATTAGCCTGATGATGTTCCAGCTTgcg              >  6:493938/1‑151 (MQ=255)
                                                                                                                                         cgGATCGACCTGTTC‑TTCT‑GGTTCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCACGGGCAATAGCTGCTTCGACGGCGGGTTTGCGCGGATAGCCCTGTTTTTCTGGTTCCGCATTATCCTGTTGATGTTCCAGCTTgcgc             >  8:310540/1‑151 (MQ=14)
                                                                                                                                         cgGATCGACCTGTTC‑TTCT‑GGTTCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCACGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGTTCCGCATTAGCCTGTTGCTGTTCCAGCTTccgc             >  8:245792/1‑151 (MQ=255)
                                                                                                                                           gATCGACCTGTTC‑TTCT‑GGTTCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCGCGGGCAATAGCTGCTTCAACGGCGGGTTTTCGCGGATCGGCATCGTGTTCTGGGTCCGCATTATCCTGAAGCTCTTCCAGAttcccccc           >  3:491811/1‑145 (MQ=14)
                                                                                                                                            aTCGACCTGTTC‑TTCT‑GGTTCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCACGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGCCCTGTTGTTCTGGTTCCGCATTAGCCTGTTGGTGTTCCAGCTTGCGCGCt          >  1:247034/1‑151 (MQ=255)
                                                                                                                                              cgcccTGTTC‑TTCT‑GGTTCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCCCGGGCAATAGCGGCTTCCACGGCCGCTTTTCGAGGATCGCCCACTTGTGCTGGTTCCGGATTAGCCTGATGCTCTTACAGCTTGCCCGCtgt        >  5:535147/4‑149 (MQ=14)
                                                                                                                                              cccccTGTCC‑TTCT‑GGTTCTTGTTTAGCCTGGTGCTGTTCCAGCTTGCCGGCTGTGGGGAGTGAATTCCCTTCTGCGAGGGCCGCTTCGGCCGTATCTACCTGTTCTTCTGGTTCCGCATTAGCCTGTTGCTGCTCCAGCTTGCGCGCttt        <  5:448990/148‑1 (MQ=2)
                                                                                                                                              cGACCTGTTC‑TTCT‑GGTTCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCACGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGCCCTGTTGTTCTGGTTCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGAGCttt        >  1:270887/1‑151 (MQ=255)
                                                                                                                                               gACCTGTTC‑TTCT‑GGTTCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCACGGGCAATAGCTGCTTCGACGGCGGCTTTGCGGGGATCGCCATGTTTTTCTGGTTCCGAATTTGCCTGTTGATGTTCCAGATTGGGAGCtttt       >  4:83581/1‑150 (MQ=14)
                                                                                                                                               gACCTGTTC‑TTCT‑GGTTCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCACGGGCAATAGCGGCTTCTACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGTTCCGCATTAGCCTGTTGCTCTTACAGCTTGCGCGCtttt       >  5:538236/1‑150 (MQ=255)
                                                                                                                                               gACCTGTTC‑TTCT‑GGTTCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCACGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGCCCTGTGGTTCTGGTTCCGCATTATCCTGTTGCTGTTCCAGCTTGCGAGATTTg       >  4:502222/1‑151 (MQ=255)
                                                                                                                                               gACCTGTTC‑TTCT‑GGTTCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCACGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGTTCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTg       >  7:943346/1‑151 (MQ=40)
                                                                                                                                                 ccTGTTC‑TTCT‑GGTTCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCACGGGCAATAGCGGCTTCGACGGCGGGTTTGCGAGGATCGACCTGGTGTTCTGGGTCGGGATTAGCCTGTTGATGTTCCAGCTTGCGAGGTTTgtg     >  2:153354/1‑149 (MQ=14)
                                                                                                                                                 ccTGTTC‑TTCT‑GGTTCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCACGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTCTTGTTCTGGTTCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGgc     >  5:1028854/1‑151 (MQ=255)
                                                                                                                                                  cTGTTC‑TTCT‑GGTTCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCACGGGCGATAGCTGCTTCGACGGCAGATTTACGAGGATCAACAACTTTTTCTGCTTCCGAATTTTCCTGAAGATCTTCCAGAttcccacagtattcc    >  8:1045738/1‑138 (MQ=2)
                                                                                                                                                  cTGTTC‑TTCT‑GGTTCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCACGGGCAATAGCGGCTTCGACGGCGGGTTTGCGAGGATCGACCTGGGTTGCTGCTTCCGGATTTTCCTGTTGGTGTTCCAGATTGGGCGCTGGGgcg    >  8:166304/1‑151 (MQ=14)
                                                                                                                                                   tGTTC‑TTCT‑GGTTCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCACGGGCAATAGCGGCTTCGACGGCGGCTTTGCGAGGATCGACCTGTTGTTCTGGTTCCGCAGTATCCTGTTGCTGTTCCAGCTTGCGAGGTTTGgcgg   >  1:512056/1‑150 (MQ=255)
                                                                                                                                                    gTTC‑TTCT‑GGTTCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCACGGGCGATAGCTGCTTCGACGGCGGGTTTGCGAGGATCGCCCAGTTGTGCTGGTTCCGGAGTTGCCTGTTGGTCTTCCAGGTTGCGCCGTTTGTcgcg  >  2:775863/1‑151 (MQ=14)
                                                                                                                                                    gTTC‑TTCT‑GGTTCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCACGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGCCCTGTTGTTCTGGTTCCGCATTATCCTGTTGCTGTTCCAGATTCCGAGATTTGTcgcg  >  8:796280/1‑151 (MQ=14)
                                                                                                                                                       |                                                                                                                                                     
CTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTG‑GCACGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTC‑TTCT‑GGTTCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCACGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGTTCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCGCG  >  DH1/2169570‑2169867

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑