Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | DH1 | 3,448,526 | 0 | A | C | 30.9% | 413.2 / 65.9 | 243 | intergenic (‑86/+70) | malZ/proY | alpha‑glycosidase/proline‑specific permease ProY |
Reads supporting (aligned to +/- strand): ref base A (132/36); new base C (0/75); total (132/111) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 2.08e-35 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 255 total aligned reads displayed.
AGCAGTTGATCTTTGCTTTGTTTAACAAATGGGGGCACCGGCAGGTGCCATGCATTTAACATCATAATTCCCCTGTGATGAAAATCTGATCACCTTGCCATAGCCTAATGCAGGATCACTCATCATCTGAAGGATATTTGGGGGAGGAGGACGGGGGCGGATAACTTTCGGAATAGCCGGATCAGGATTTCCTCCTGAACCGGCTTACAGAACGCAAGGATTACTGGTTTTCAGCCAGCTGACGATCGTGGCGGCGTTTAAACATCCAGCCAATCAACAGCACAACAATCCACGCGAAACC > DH1/3448376‑3448676 | aGCAGTTGATCTTTGCTTTGTTTAACAAATGGGGGCACCGGCAGGTGCCATGCATTTAACATCATAATTCCCCTGTGATGAAAATCTGATCACCTTGCCATAGCCTAATGCAGGATCACTCATCATCTGAAGGATATTTGGGggaggagga < 7:934133/151‑1 (MQ=255) cAGTTGATCTTTGCTTTGTTTAACAAATGGGGGCACCGGCAGGTGCCATGCATTTAACATCATAATTCCCCTGTGATGAAAATCTGATCACCTTGCCATAGCCTAATGCAGGATCACTCATCATCTGAAGGATATTTGGGGGAGGAGGACg < 3:524639/151‑1 (MQ=255) cAGTTGATCTTTGCTTTGTTTAACAAATGGGGGCACCGGCAGGTGCCATGCATTTAACATCATAATTCCCCTGTGATGAAAATCTGATCACCTTGCCATAGCCTAATGCAGGATCACTCATCATCTGAAGGATATTTGGGGGAGGAGGACg < 7:802010/151‑1 (MQ=255) gTTGATCTTTGCTTTGTTTAACAAATGGGGGCACCGGCAGGTGCCATGCATTTAACATCATAATTCCCCTGTGATGAAAATCTGATCACCTTGCCATAGCCTAATGCAGGATCACTCATCATCTGAAGGATATTTGGGGGAGGAGGACggg < 3:72874/151‑1 (MQ=255) tGATCTTTGCTTTGTTTAACAAATGGGGGCACCGGCAGGTGCCATGCATTTAACATCATAATTCCCCTGTGATGAAAATCTGATCACCTTGCCATAGCCTAATGCAGGATCACTCATCATCTGAAGGATATTTGGGGGAGGAGGACggggg > 1:659138/1‑151 (MQ=255) tGATCTTTGCTTTGTTTAACAAATGGGGGCACCGGCAGGTGCCATGCATTTAACATCATAATTCCCCTGTGATGAAAATCTGATCACCTTGCCATAGCCTAATGCAGGATCACTCATCATATGAAGGATATTTGGGGGAGGAGGACggggg > 3:635766/1‑151 (MQ=255) gATCTTTGCTTTGTTTAACAAATGGGGGCACCGGCAGGTGCCATGCATTTAACATCATAATTCCCCTGTGATGAAAATCTGATCACCTTGCCATAGCCTAATGCAGGATCACTCATCATCTGAAGGATATTTGGGGGAGGAGGACGGGGGc > 6:233250/1‑151 (MQ=255) aTCTTTGCTTTGTTTAACAAATGGGGGCACCGGCAGGTGCCATGCATTTAACATCATAATTCCCCTGTGATCAAAATCTGATCACCTTGCCATAGCCTAATGCAGGATCACTCATCATCTGAAGGATATTTGGGGGACGAGGACGGGGGCg > 6:1051082/1‑151 (MQ=255) tCTTTGCTTTTTTTAACAAATGGGGGCACCGGCAGGTGCCATGCATTTAACATCATAATTCCCCTGTGATGAAAATCTGATCACCTTGCCATAGCCTAATGCAGGATCACTCATCATCTGAAGGATATTTGGGGGAGGAGGACGGGGGCg < 8:102851/150‑1 (MQ=255) tCTTTGCTTTGTTTAACAAATGGGGGCACCGGCAGGTGCCATGCATTTAACATCATAATTCCCCTGTGATGAAAATCTGATCACCTTGCCATAGCCTAATGCAGGATCACTCATCATCTGAAGGATATTTGGGGGAGGAGGACGGGGGCgg > 6:616941/1‑151 (MQ=255) tCTTTGCTTTGTTTAACAAATGGGGGCACCGGCAGGTGCCATGCATTTAACATCATAATTACCCTGTGATGAAAATCTGATCACCTTGCCATAGCCTAATGCAGGATCACTCATCATCTGAAGGATATTTGGTGGAGGAGGACGGGGGCgg > 2:1063463/1‑151 (MQ=255) ttgctttgTATAACAACGGGGGCCACCGGCAGGTGCCTGTCATTTAACATCATAATTCCCCTGTGATTAAAATCTCATCACCTTGCCATAGCCTACTGCAGGATCACTCATCATCTCATTTATATTGGGGGGCGGCGGCCGGGGGCGGAt < 8:684302/150‑1 (MQ=255) ttcttttTTTAACAACTGGGGCCACCGGCAGGTGCCATGAATTTAACATAATAATTCCCCTTTCATGAAAATCTGATCCCCTTGCCATAGCCTAATGCAGTATCACTCATCATCTGAAGGATATTTGGGGGCGGCGGCCGGGGGCGGATa < 4:545776/148‑1 (MQ=255) tgctttgTTTAACAAATGGGGGCACCGGCAGGTGCCATGCATTTAACATCATAATTCCCCTGTGATGAAAATCTGATCACATTGCCATAGCCTAATGCAGGATCACTCATCATCTGAAGGATATTTGGGGGAGGAGGACGGGGGCGGATa > 4:920063/1‑150 (MQ=255) cctttgTTTAACAATTGGGCGCCCCGCCATTTTACATCAATTAAAAATCATAAATCCCCTCTCATGAAAATCTGATCACCTTCCCATAGCCTAATGCAGCATCACTCATCATCTGAAGGATATTTGGGGGAGGCGGCCGGCCGCGGATaa < 4:1063615/149‑1 (MQ=255) ctttgTTTAACAAATGGGGGCACCGGCAGGTGCCATGCATTTAACATCATAATTCCCCTGTGATGAAAATCTGATCACCTTGCCATAGCCTAATGCAGGATCACTCATCATCTGAAGGATATTTGGGGGAGGAGGACGGGGGCGGATAACt > 1:598522/1‑151 (MQ=255) tttgTTTAACAAATGGGGGCACCGGCAGGTGCCATGCATTTAACATCATAATTCCCCTGTGATGAAAATCTGATCACCTTGCCATAGCCTAATGCAGGATCACTCATCATCTGAAGGATATTTGGGGGAGGAGGACGGGGGCGGATAACtt > 3:704711/1‑151 (MQ=255) ttgTTTAGCAAATGGGGGCACCGGCAGGTGCCATGCATTTAACATCATAATTCCCCTGTGATGAAAATCTGATCACCTTGCCATAGCCTAATGCAGGATCACTCATCATCTGAAGGATATTTGGGGGAGGAGGACGGGGGCGGATAACttt > 7:494463/1‑151 (MQ=255) tttttAAAAATTGGGGGCACCGGCAGGTGCCATGCATTTAAAATAATAATTCCCCTTTTATGAAAATCTTATCACCTTGCCATAGCCTAATGCAGGATCACTCATCATCTGAAGGATTTTTGGGGGAGGAGGACGGGGGCGGATAACttt < 3:284000/148‑1 (MQ=255) aaCAAATGGGGGCACCGGCAGGTGCCATGCATTTAACATCATAATTCCCCTGTGATGAAAATCTGCTCACCTTGCCATAGCCTAATGCAGGATCACTCATCATCTGAAGGATATTTGGGGGAGGAGGACGGGGGCGGATAACTTTCGGAAt > 6:8059/1‑151 (MQ=255) cAAATGGGGGCACCGGCAGGTGCCATGCATTTAACATCATAATTCACCTGTGATGAAAATCTGATCACCTTGCCATAGCCTAATGCAGGATAACTCATCATCTGAAGGATATTTGGGGGAGGACTACGGGGGCGGATAACTTTCCGAAt > 1:480048/1‑149 (MQ=255) aaaaTGGGGGCACCGGCAGGTGACATTCATTTAACATAATAATTCCCCTGTTATCAAAATCTGATCACCTTGCCATAGCCTAATGCAGGATCACTCATCATCTGAAGTATATTTGGGGGAGGAGGAGGGGGGCGGATAACTTTCGGAATAg < 1:969953/150‑1 (MQ=255) aaTGGGGGCACCGGCAGGTGCCATGCATTTAACATCATAATTCCCCTGTGATGAAAATCTGATCACCTTGCCATAGCCTAATGCAGGATCACTCATCATCTGAAGGATATTTGGGGGAGGAGGACGGGGGCGGATAACTTTCGGAATAGcc > 4:343146/1‑151 (MQ=255) gggcccACCGGCAGGTGCCATTAATTTAACATCATAATTCCCCTTTGATTAAAATCTGATCACCTTACCATAGCCTAATGCAGTATCACTCATCATCTTAAGGATATTTGGGGGCGGCGGCCGGGGGCGGATAACTTTCGGAATAGCCgg < 5:229525/145‑1 (MQ=255) gcggCAGCGGCAGGTGCAATGCCATAAAAATAATAATTCCCCGGTTTTGAAAATCTGATCACCTTGCCATACCATAATGCAGGATCACTCATCATCTGACGGTTATGTGGGGGAGGAGGCCGGGGGCGGATAACTTTCGGAATAGCCGGAt < 6:717658/149‑1 (MQ=255) gggCACCGGCTGGTGCCATTCATTAAAAATAATAATGCCCCTGTTATTAAAATCTGACCACCTTGCCATCGCCTAATGCATGATCACTCATCATCTGAAGGATATTTGGGGGAGGCGGACGGGGGCGGATAACTTTCGGAATAGCCGGATc < 3:178604/151‑1 (MQ=255) gggCACCGGCAGGTGCCATTCATTTAAAATCATAATTCCCCTTTTATTAAAATCCGATCACCTTGCCATAGCCTAATGCAGGATCACTCATCATCTGAAGTATTTTTGGGGGCGGCGGCCGGGGGCGGATAACTTTCGGAATAGCCGGATc < 5:376980/151‑1 (MQ=255) ggCACCGGCAGGTGCAATCAAATTAACAAAAAAATTCCCCTGTGATTAAAAGCTGATCACCTTCCCATAGCCTAATGCAGGATCACTCATCACCTGAAGGATATTTGGGGGCGGAGGACGGGGCCGGATAACTTTCGGAATAGCCGGATCa < 7:626025/151‑1 (MQ=255) aCCGGCAGTTGCCATGCATTTAACATCATAATTCCCCTTTTATGAAAATCTCATCACCTTGCCATAGCCTAATGCAGGATCACTCATCATCTGAAGGATAGTTGGGGGAGCCGGCCGCGGGCGGATAACTTTCGGAATAGCCGGATCAGGa < 3:499646/151‑1 (MQ=255) ccGGGAGGTGCCATGCATTTAACATCATAATTCCCCTGTGATCAAAATCTGATCACGTTGCCATAGCCTAATGCAGGATCACTCATCATCTGAAGGATATTTGGGGGAGGAGGCCGGGGGCGGATAACTTTCGGAATAGCCGGATCAGGAt < 1:884368/151‑1 (MQ=255) gggaGGTGTCATTAATTTAACATCATAATTCCCCTGTGATGAAATTCTGATCACCTTGCCATAGCCTAATGCAGCATCACTCATCATCTTAAGTATATTTGGGGGAGGAGGACGGGGGCGGATAACTTTCGGAATAGCCGGATCAGGAttt < 7:77179/148‑1 (MQ=255) ggCAGGTGCCATGCATTTAACATCATAATTCCCCTGTGATGAAAATCTGATCACCTTGCCATAGCCTAATGCAGGATCACTCATCATCTGAAGGATATTTGGGGGAGGAGGACGGGGGCGGATAACTTTCGGAATAGCCGGATCAGGAttt > 3:4216/1‑151 (MQ=255) gaaGGTGCAATTCATTTAAAATCATAAATCCACTGTTATAAAAATCTGATCACCTTGCCATTGCCTTATGCAGGATCACTCATCATTTTCTTGTTTTTTGGGGGCGGCGCCCGGGGGCGGATAACTTTCGGAATAGCCGGATCAGGATTtc < 3:1023966/149‑1 (MQ=255) gCAGGTGCCATGCATTTAACATCATAATTCCCCTGTGATGAAAATCTGATCACCTTGCCATAGCCTAATGCAGGATCACTCATCATCTGAAGGATATTTGGGGGAGGAGGACGGGGGCGGATAACTTTCGGAATAGCCGGATCAGGATTtc > 7:650573/1‑151 (MQ=255) gTGCCATGCATTTAACATCATAATTCCCCTGTGATGAAAATCTGATCACCTTGCCATAGCCTAATGCAGGATCACTCATCATCTGAAGGATATTTGGGGGAGGAGGACGGGGGCGGAGAACTTTCGGAATAGCCGGATCAGGATTtcctcc > 1:553651/1‑151 (MQ=255) tccATGCATTAAACATCATAAGTCCCCTGTGATGAAAATCTGATCACCTTGCCATAGCCTAAGGCAGGATCACTCATCATCTGAAGGATATTTGGGGGAGGCGGACGGGGGCGGATAACTTTCGGAATAGCCGGATCAGGATTTcctcct < 3:254266/149‑1 (MQ=255) ccATGCATTTAACATCATAATTCCCCTGTGATGAAAATCTGATCACCTTGCCATAGCCTAATGCAGGATCACTCATAATCTGAAGGATATTTGGGGGAGGAGGACGGGGGCGGATAACTTTCGGAATAGCCGGATCAGGATTTCCTCCTg > 7:83190/1‑150 (MQ=255) aTGCATTTAAAATCATAAATCCCCTGTGATGAAAATCTGATCCCCTTGCCATAGCCTAATGCAGGATCACTCATCATCTGAAGGATATTGGGGGGAGGAGGCCGGGGGCGGATAACTTTCGGAATAGCCGGATCAGGATTTCCTCCTGAAc < 2:618512/151‑1 (MQ=255) tGCATTTAACATCATAATTCCCCTGTGATGAAAATCTGATCACCTTGCCATAGCCTAATGCAGGATCACTCATCATCTGAAGGATATTTGGGGGAGGAGGACGGGGGCGGATAACTTTCGGAATAGCCGGATCAGGTTTTCCTCCTGAccc > 7:254020/1‑151 (MQ=255) aTTTAACATCATAATTCCCCTGTGATGAAAATCTGATCACCTTGCCATAGCCTAATGCAGGATCACTCATCATCTGAAGGATATTTGGGGGAGGAGGCCGGGGGCGGATAACTTTCGGAATAGCCGGATCAGGATTTCCTCCTGAACCGGc < 2:77629/151‑1 (MQ=255) aTTTAACATCATAATTCCCCTGTGATGAAAATCTGATCACCTTGCCATAGCCTAATGCAGGATCACTCATCATCTGAAGGATATTTGGGGGAGGAGGACGGGGGCGGATAACTTTCGGAATAGCCGGATCAGGATTTCCTCCTGAACCGGc > 8:77587/1‑151 (MQ=255) aTTTAACATCATAATTCCCCTGTGATGAAAATCTGATCACCTTGCCATAGCCTAATGCAGGATCACTCATCATCTGAAGGATATTTGGGGGAGGAGGACGGGGGCGGATAACTTTCAGAATAGCCGGATCAGGATTTCCTCCTGAACCGGc > 8:733081/1‑151 (MQ=255) tttAACATCATAATTCCCCTGTGATGAAAATCTGATCACCTTGCCATAGCCTAATGCAGGATCACTCATCATCTGAAGGATATTTGGGGGAGGAGGACGGGGGCGGATAACTTTCGGAATAGCCGGATCAGGATTTCCTCCTGAACCGGCt > 4:253358/1‑151 (MQ=255) tttAACATCATAATTCCCCTGTGATGAAAATCTGATCACCTTCCCATAGCCTAATGCAGGATCACTCATCATCTCAAGGATATTTGGGGGAGGAGGACGGGGGCGGATAACTTTCGGAATAGCCGGATCAGGATTTCCTCCTGAACCGGCt > 4:421142/1‑151 (MQ=255) ttAACATCATAATTCCCCTGTGATGAAAATCTGATCACCTTGCCATAGCCTAATGCAGGATCACTCATCATCTGAAGGATATTTGGGGGAGGAGGACGGGGGCGGATAACTTTCGGAATAGCCGGATCAGGATTTCATCCTGAACCGGCtt > 2:875959/1‑151 (MQ=255) catcatAATTCCCCTGTGATGAAAATCTGATCACCTTGCCATAGCCTAATGCAGGATCACTCATCATCTGAAGGATATTTGGGGGAGGAGGACGGGGGCGGATAACTTTCGGAATAGCCGGATCAGGATTTCCTCCTGAACCGGCTTAc > 1:1011604/1‑149 (MQ=255) aacatAATTCCCCTGTGATCAAAACCTGACCCCCGTGCCAGACCCGAATCCAGGAACACACATCATCTGAAGGATATGGGGGGGCGGCGGCCGGGCGCGGATAACTTTCGGAATAGCCGGATCAGGATTTCCTCCTGAACCGGCTTACAGa < 1:216413/149‑1 (MQ=255) tcatAATTCCCCTGTGATGAAAATCTGATCACCTTGCCATAGCCTAATGCAGGATCACTCATCATCTGAAGGATATTTGGGGGAGGAGGACGGGGGCGGATAACTTTCGGAATAGCCGGATCAGGATTTCCTCCTGAACCGGCTTACAGa > 8:243072/1‑150 (MQ=255) tcatAATTCCCCTGTGATGAAAATCTGATCACCTTGCCATAGCCTAATGCAGGATCACTCATCATCTGAAGGATATTTGGGGGAGGAGGACGGGGGCGGATAACTTTCGGAATAGCCGGATCAGGATTTCCTCCTGAACCGGCTTACAGa > 5:293612/1‑150 (MQ=255) ccaaaaagccccTGTGATGAAAATCTGAGCCCCTTGCCAGA‑CCTAACGCAGCATCCCTCACCATCTGACGGATATTGGGGGGCGGAGGCCGGGGGCGGATAACTTTCGGAATAGCCGGATCAGGATTTCCTCCTGAACCGGCTTACAGAAc < 1:76299/143‑1 (MQ=255) aaaaaaatCCCCTGTGAACAAAAACTCCGCACCTTGCCATAGCCTAATCCACGATCACTCCTCACCTGACGGCTCGTGCGCGGCCCCCGCCGCCCGCGGATAACTTTCGGAATAGCCGGATCAGGATTTCCTCCTGAACCGGCTTACAGaa < 5:485445/144‑1 (MQ=255) catAATTCCCCTGTGATGAAAATCTGATCACCTTGCCATAGCCTAATGCAGGATCACTCATCATCTGAAGGATATTTGGGGGAGGAGGACGGGGGCGGATAACTTTCGGAATAGCCGGATCAGGATTTCCTCCTGAACCGGCTTACAGAAc > 5:797909/1‑151 (MQ=255) catAATTCCCCTGTGATGAAAATCTGATCACCTTGCCATAGCCTAATGCAGGATCACTCATCATCTGAAGGATATTTGGGGGAGGAGGACGGGGGCGGATAACTTTCGGAATAGCCGGATCAGGATTTCCTCCTGAACCGGCTTACAGAAc > 5:701379/1‑151 (MQ=255) catAATGCGCCTGTCATCAAACTCTGAGCCCCTCGCCATCGCCTACGGCAGGAGCCCCCATCCTCGGACGCATATTTGCGGCCGCAGGCCGGGCGCGGATAACTTTCGGAATAGCCGGATCAGGATTTCCTCCTGAACCGGCTTACAGAAc < 3:573669/151‑1 (MQ=255) ttCCCCTGTGATGAAAATCTGATCACCTTGCCATAGCCTAATGCAGGATCACTCATCATCTGAAGGATATTTGGGGGAGGAGGACGGGGGCGGATAACTTTCGGAATAGCCGGATCAGGATTTCCTCCTGAACCGGCTTACAGAACGCa > 5:571701/1‑149 (MQ=255) ccccTTAGATTAACATCTGATCACCTTCCCATAGCACAAACAAGTATACCTCTTCATCTGAAGGATATGTGGGGGATGCGGCCGGGGGCGGATAACTTTCGGAATAGCCGGATCAGGATTTCCTCCTGAACCGGCTTACAGAACGCAAGGa < 4:389827/151‑1 (MQ=255) cccTGTGATGAAAAGCTGATCACGTTGCCATAGCCTAAGCCAGGATCACTCATCATCTGAAGGATATTTGGGGGAGGAGGCCGGGGGCGGATAACTTTCGGAATAGCCGGATCAGGATTTCCTCCTGAACCGGCTTACAGAACGCAAGGAt < 3:375352/151‑1 (MQ=255) tgtgATGAAAATCTGATCACCTTGCCATAGCCTAATGCAGGATCACTCATCATCTGAAGGATATTTGGGGGAGGAGGACGGGGGCGGATAACTTTCGGAATAGCCGGATCAGGATTTCCTCCTGAACCGGCTTACAGAACGCAAGGATTAc > 5:972836/1‑151 (MQ=255) attaaaaGCTCATCACCTTGCCACAGCCTAATCCATCATCCCTCATCCTCTGAACTATTTTTGGGGCCCGCGTCCTGGGGCGGATAACTTTCGGAATAGCCGGATCAGGATTTCCTCCTGAACCGGCTTACAGAACGCAAGGATTACTGGt < 6:171852/148‑1 (MQ=255) aataTCTTATCACCTTGTCATACCCTAATTCATCATCTCTCTTCATCTGAAGGATATTGGGGGGCCGCGCCCGGGCGCGGATAACTTTCGGAATAGCCGGATCAGGATTTCCTCCTGAACCGGCTTACAGAACGCAAGGATTACTGGttt < 6:518654/147‑1 (MQ=255) aaaaTCTGATCACCTTGCCATAGCCTAATGCAGGATCACTCATCATCTGAAGGATATTTGGGGGAGGAGGACGGGGGCGGATAACTTTCGGAATAGCCGGATCAGGATTTCCTCCTGAACCGGCTTACAGAACGCAACGATTACTGGtttt > 8:921635/1‑151 (MQ=255) aaaTCTGACCACCATCCCATAGCCTACTCCAGGCTCACTCATCATCTGACGGATTTTTGGGGGCGGCGGACGGGGGCGGATAACTTTCGGAATAGCCGGATCAGGATTTCCTCCTGAACCGGCTTACAGAACGCAAGGATTACTGGTTTTc < 8:500289/151‑1 (MQ=255) tCTGATCACCTTGCCATAGCCTAATGCAGGATCACTCATCATCTGAAGGATATTTGGGGCAGGAGGACGGGGGCGGATAACTTTCGGAATAGCCGGATCAGGATTTCCTCCTGAACCGGCTTACAGAACGCAAGGATTACTGGTTTTcagc > 2:11063/1‑151 (MQ=255) ccgaccACCTTGCCATACCCTAATCCAGCACCACTCCCCCTCTGAAGGATATGGGGGGGCGGCGGCCGCGCGCGGATAACTTTCGGAATAGCCGGATCAGGATTTCCTCCTGAACCGGCTTACAGAACGCAAGGATTACTGGTTTTcagcc < 2:977894/146‑1 (MQ=255) gtgcACCTTGCCATTGCCTATGGCAGCCTCAGTGACCCTCTGTAGTTTATGTGGGGGAGGAGGACGGGGGCGGATAACTTTCGGAATAGCCGGATCAGGATTTCCTCCTGAACCGGCTTACAGAACGCAAGGATTACTGGTTTTcagcca < 2:585640/147‑1 (MQ=255) gATCACCTTGCCATAGCCTAATGCAGGATCACTCATCATCTGAAGGATATTTGGGGGAGGAGGACGGGGGCGGATAACTTTCGGAATAGCCGGATCAGGATTTCCTCCTGAACCGGCTTACAGAACGCAAGGATTACTGGTTTTcagcc > 2:158679/1‑149 (MQ=255) gATCACATTGCCATCGCCTAATGCAGGTTCACTGATCATCTGAAGTATATTTGGGGGAGGCGGAGGGGGGCGGATAACTTTCGGAATAGCCGGATCAGGATTTCCTCCTGAACCGGCTTACAGAACGCAAGGATTACTGGTTTTcag < 4:67377/147‑1 (MQ=255) tCACCTTGCCATAGCCTAATGCAGGATCACTCATCATCTGAAGGATATTTGGGGGAGGAGGACGGGGGCGGATAACTTTCGGAATAGCCGGATCAGGATTTCCTCCTGAACCGGCTTACAGAACGCAAGGATTACTGGTTTTCAGCCAGCt > 4:175897/1‑151 (MQ=255) aCCTTGCCATAGCCTAATGCAGGATCACTCATCATCTGAAGGATATTTGGGGGAGGAGGACGGGGGCGGATAACTTTCGGAATAGCCGGATCAGGATTTCCTCCTGAACCGGCTTACAGAACGCAAGGATTACTGGTTTTCAGCCAGCTg > 6:484691/1‑150 (MQ=255) aCCTTCCCATACCCTAATGCAGGATCACTCATCATCTGAAGGATATGTGGGGGAGGCGGCCGGGCGCGGATAACTTTCGGAATAGCCGGATCAGGATTTCCTCCTGAACCGGCTTACAGAACGCAAGGATTACTGGTTTTCAGCCAGCTGa < 7:734550/151‑1 (MQ=255) ccTTGCCATAGCCTAATGCATGATCACTAATCATCTGAAGGATATTAGGGGGAGGAGGACGGGGGCGGATAACTTTCGGAATAGCAGGATCAGGATTTACTAATGAACAGGATTACAGAACGCAAGGATTACTGGTTTTCATCCAGCTGAc > 4:112144/1‑151 (MQ=255) gCCATAGCCTAATCCAGGATCACTCATCATCTTAAGGATATTTGGGGGAGCCGGCCGGGGGCGGATAACTTTCGGAATAGCCGGATCAGGATTTCCTCCTGAACCGGCTTACAGAACGCAAGGATTACTGGTTTTCAGCCAGCTGACGATc < 3:604556/151‑1 (MQ=255) cATAGCCTAATGCAGGATCACTCATCATCTGAAGGATATTTGGGGGAGGAGGACGGGGGCGGATAACTTTCGGAATAGCCGGATCAGGATTTCCTCCTGAACCGGCTTACAGAACGCAAGGATTACTGGTTTTCAGCCAGCTGACGATCGt > 1:10301/1‑151 (MQ=255) tAGCCTAATGCAGGATCACTCATCATCTGAAGGATATTTGGGGGAGGAGGACGGGGGCGGATAACTTTCGGAATAGCCGGATCAGGATTTCCTCCTGAACCGGCTTACAGAACGCAAGGATTACTGGTTTTCAGCCAGCTGACGATCGTgg > 3:872941/1‑151 (MQ=255) cccTAATGCAGGAGCACTCATCATCGGCCGCATATTTGGGGGAGGCGGACGGGGGCGGATAACTTTCGGAATAGCCGGATCAGGATTTCCTCCTGAACCGGCTTACAGAACGCAAGGATTACTGGTTTTCAGCCAGCTGACGATCGTggcg < 7:145768/150‑1 (MQ=255) cTAATGCAGGATCACTCATCATCTGAAGGATATTTGGGGGAGGAGGACGGGGGCGGATAACTTTCGGAATAGCCGGATCAGGATTTCCTCCTGAACCGGCTTACAGAACGCAAGGATTACTGGTTTTCAGCCAGCTGACGATCGTggcggc > 4:59387/1‑151 (MQ=255) cTAATGCAGGATCACTAATCATCTGAAGGATATTTGGGGGAGGAGGACGGGGGCGGATAACTTTCGGAATAGCCGGATCAGGATTTCCTCCTGAACCGGCTTACAGAACGCAAGGATTACTGGTTTTCAGCCAGCTGACGATCGTggcggc > 2:711203/1‑151 (MQ=255) aaTGCAGGATCACTCATCATCTGAAGGATATTTGGGGGAGGAGGACGGGGGCGGATAACTTTCGGAATAGCCGGATCAGGATTTCCTCCTGAACCGGCTTACAGAACGCAAGGATTACTGGTTTTCAGCCCGCTGCCGATCGTGGCGGCGt > 8:148562/1‑151 (MQ=255) aTGCAGGATCACTCATCATCTGAAGGATATTTGGGGGAGGAGGACGGGGGCGGATAACTTTCGGAATAGCCGGATCAGGATTTCCTCCTGAACCGGCTTACAGAACGCAAGGATTACTGGTTTTCAGCCAGCTGACGATCGTGGCGGCGtt > 8:624791/1‑151 (MQ=255) ggCACGAACACGCATCATCTCACGGATATGTGGGGGCGGCGGCCGGGGGCGGATAACTTTCGGAATAGCCGGATCAGGATTTCCTCCTGAACCGGCTTACAGAACGCAAGGATTACTGGTTTTCAGCCAGCTGACGATCGTGGCGGCGttt < 3:977984/150‑1 (MQ=255) gCAGGATCACTCATCATCTGAAGGATATTTGGGGGAGGACGACGGGGGCGGACAACTTTCGGAATAGCCGGATCAGGATTTCCTCCTGAACCGGGTTACAGAACGCAAGGATTACTGGTTTTCAGCCAGCTGACGATCGTCGCGGGGttt > 2:178358/1‑150 (MQ=255) cAGGATCTATCATCAGCTGATTTTTATTTGGGGGAGGCGGAGGGGGGCGGATAACTTTCGGAATAGCCGGATCAGGATTTCCTCCTGAACCGGCTTACAGAACGCAAGGATTACTGGTTTTCAGCCAGCTGACGATCGTGGCGGCGTTTa < 8:533612/150‑1 (MQ=255) aGGATCACTCATCATCTGAAGGATATTTGGGGGAGGAGGACGGGGGCGGATAACTTTCGGAATAGCCGGATCAGGATTTCCTCCTGAACCGGCTTACAGAACGCAAGGATTACTGGTTTTCAGCCAGCTGACGATCGTGGCGGCGTTTaa > 5:1020657/1‑150 (MQ=255) aTCACTCATCATCTGAAGGATATTTGGGGGAGGAGGACGGGGGCGGATAACTTTCGGAATAGCCGGATCAGGATTTCCTCCTGAACCGGCTTACAGAACGCAAGGATTACTGGTTTTCAGCCAGCTGACGATCGTGGCGGCGTTTAAACAt > 2:193620/1‑151 (MQ=255) catcatCTGACGGATATTTGGGGGCGGAGGACGGGCGCGGATAACTTTCGGAATAGCCGGATCAGGATTTCCTCCTGAACCGGCTTACAGAACGCAAGGATTACTGGTTTTCAGCCAGCTGACGATCGTGGCGGCGTTTAAACATCCAg < 7:1047507/149‑1 (MQ=255) catcatCTGAAGGATATTTGGGGGAGGAGGACGGGGGCGGATAACTTTCGGAATAGCCGGATCAGGATTTCCTCCTGAACCGGCTTACAGAACGCAAGGATTACTGGTTTTCAGCCAGCTGACGATCGTGGCGGCGTTTAAACATCCAGcc > 4:726232/1‑151 (MQ=255) atcatcTGAAGGATTTTTGGGGGAGGAGGCCGGGGGCGGATAACTTTCGGAATAGCCGGATCAGGATTTCCTCCTGAACCGGCTTACAGAACGCAAGGATTACTGGTTTTCAGCCAGCTGACGATCGTGGCGGCGTTTAAACATCCAGCCa < 2:353138/151‑1 (MQ=255) tcatcTGAAGGATATTTGGGGGAGGAGGACGGGGGCGGATAACTTTCGGAATAGCCGGATCAGGATTTCCTCATGAACCGGCTTACAGAACGCAAGGATTACTGGTTTTAAGCCAGCTGACGATCGTGGCGGCGTTTAAACATCCAGCCa > 6:783715/1‑150 (MQ=255) ccgaaggattgggggggcAGGCGGCCGGGGGCGGATAACTTTCGGAATAGCCGGATCAGGATTTCCTCCTGAACCGGCTTACAGAACGCAAGGATTACTGGTTTTCAGCCAGCTGACGATCGTGGCGGCGTTTAAACATCCAGCCAATCaa < 1:158624/138‑1 (MQ=255) cTGAAGGATATTTGGGGGAGGAGGACGGGGGCGGATAACTTTCGGAATAGCCGGATCAGGATTTCCTCCTGAACCGGCTTACAGAATGCAAGGATTACTGGTTTTCAGCCAGCTGACGATCGTGGCGGCGTTTAAACATCCAGCCAATCa > 1:674208/1‑150 (MQ=255) gAAGGATATGGGGGGGCGGCCGACGGGGGCGGATAACTTTCGGAATAGCCGGATCAGGATTTCCTCCTGAACCGGCTTACAGAACGCAAGGATTACTGGTTTTCAGCCAGCTGACGATCGTGGCGGCGTTTAAACATCCAGCCAATc < 7:330011/147‑1 (MQ=255) aaGGATATTCGGGGGAGGCGGACGGGGGCGGATAACTTTCGGAATAGCCGGATCAGGATTTCCTCCTGAACCGGCTTACAGAACGCAAGGATTACTGGTTTTCAGCCAGCTGACGATCGTGGCGGCGTTTAAACATCCAGCCAATCAACa < 8:451240/150‑1 (MQ=255) gctagttGGGGCACGAGGCCGGGCGCGGATAACTTTCGGAATAGCCGGATCAGGATTTCCTCCTGAACCGGCTTACAGAACGCAAGGATTACTGGTTTTCAGCCAGCTGACGATCGTGGCGGCGTTTAAACATCCAGCCAATCAACAGcac < 5:136851/146‑1 (MQ=255) atatTTGGGGGAGGAGGACGGGGGCGGATAACTTTCGGAATAGCCGGATCAGGATTTCCTCCTGAACCGGCTTACAGAACGCAAGGATTACTGGTTTTCAGCCAGCTGACGATCGTGGCGGCGTTTAAACATCCAGCCAATCAACAGcac > 4:87465/1‑150 (MQ=255) tGGGGGAGGAGGACGGGGGCGGATAACTTTCGGAATAGCCGGATCAGGATTTCCTCCTGAACCGGCTTACAGAACGCAAGGATTACTGGTTTTCAGCCAGCTGACGATCGTGGCGGCGTTTAAACATCCAGCCAATCAACAGCACAACAAt > 2:92611/1‑151 (MQ=255) ggggggCGGCGGCCGGGGGCGGATAACTTTCGGAATAGCCGGATCAGGATTTCCTCCTGAACCGGCTTACAGAACGCAAGGATTACTGGTTTTCAGCCAGCTGACGATCGTGGCGGCGTTTAAACATCCAGCCAATCAACAGCACAACAAt < 2:433441/150‑1 (MQ=255) ggaggaggaCGGGGGCGGATAACTTTCGGAATAGCCGGATCAGGATTTCCTCCTGAACCGGCTTACAGAACGCAAGGATTACTGGTTTTCAGCCAGCTGACGATCGTGGCGGCGTTTAAACATCCAGCCAATCAACAGCACAACAATCCAc > 1:380800/1‑151 (MQ=255) aggaggaCGGGGGCGGATAACTTTCGGAATAGCCGGATCAGGATTTCCTCCTGAACCGGCTTACAGAACGCAAGGATTACTGGTTTTCAGCCAGCTGACGATCGTGGCGGCGTTTATACATCCAGCCAATCAACAGCACAACAATCCAcgc > 6:327152/1‑151 (MQ=255) aggaCGGGGGCGGATAACTTTCGGAATAGCCGGATCAGGATTTCCTCCTGAACCGGCTTACAGAACGCAAGGATTACTGGTTTTCAGCCAGCTGACGATCGTGGCGGCGTTTAAACATCCAGCCAATCAACAGCACAACAATCCACGCGa > 2:518423/1‑150 (MQ=255) aCGGGGGCGGATAACTTTCGGAATAGCCGGATCAGGATTTCCTCCTGAACCGGCTTACAGAACGCAAGGATTACTGGTTTTCAGCCAGCTGACGATCGTGGCGGCGTTTAAACATCCAGCCAATCAACAGCACAACAATCCACGCGAAAcc > 2:560063/1‑151 (MQ=255) | AGCAGTTGATCTTTGCTTTGTTTAACAAATGGGGGCACCGGCAGGTGCCATGCATTTAACATCATAATTCCCCTGTGATGAAAATCTGATCACCTTGCCATAGCCTAATGCAGGATCACTCATCATCTGAAGGATATTTGGGGGAGGAGGACGGGGGCGGATAACTTTCGGAATAGCCGGATCAGGATTTCCTCCTGAACCGGCTTACAGAACGCAAGGATTACTGGTTTTCAGCCAGCTGACGATCGTGGCGGCGTTTAAACATCCAGCCAATCAACAGCACAACAATCCACGCGAAACC > DH1/3448376‑3448676 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |