| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | DH1 | = 225528 | 19 (0.040) | 748 (1.430) | 248/300 | 0.0 | 97.5% | intergenic (‑131/+668) | gadE/hdeD | transcriptional regulator GadE/protein HdeD |
| ? | DH1 | 1586746 = | NA (NA) | noncoding (1/1198 nt) | repeat_region | repeat region | |||||
Only 100 of 769 total aligned reads displayed.
TCGTCATGAGAAAAATCATAACTTGCTCCTTAGCCGTTATCGTTTCGAATATGTCATCCTTTTCATTATTTACATCCTTGTCCGAATCGTTGTTCAATATAGTAAACGCCTATAAGAACTTTACCCTTCGTGAACTAATACGTCTATTAACACTAATCAATACTTCAGATTTATCCATCACGCACTCCATATATTGATCCTAAGTAAGATTCCTGGTTGTTATCAGCTTGTAAATAGCAAACAAAAAGTTAACGTTTGCGGATTACTGCCCAAGAATAAGTTATCAATAACCAGTTTGTG > DH1/225379‑225678 | gagaAAAATCATAACTTGCTCCTTAGCCGTTATCGTTTCGAATATGTCATCCTTTTCATTATTTACATCCTTGTCCGAATCGTTGTTCAATATAGTAAACGCCTATAAGAACTTTACCCTTCGTGAACTAATACGTCTATTAAggaaggtg < 3:1475585‑M1/151‑9 (MQ=255) gagaAAAATCATAACTTGCTCCTTAGCCGTTATCGTTTCGAATATGTCATCCTTTTCATTATTTACATCCTTGTCCGAATCGTTGTTCAATATAGTAAACGCCTATAAGAACTTTACCCTTCGTGAACTAATACGTCTATTAAggaaggt < 5:1884250‑M1/150‑8 (MQ=255) agaAAAATCATAACTTGCTCCTTAGCCGTTATCGTTTCGAATATGTCATCCTTTTCATTATTTACATCCTTGTCCGAATCGTTGTTCAATATAGTAAACGCCTATAAGAACTTTACCCTTCGTGAACTAATACGTCTATTAAggaagctgc > 2:1097818‑M1/1‑142 (MQ=255) gaAAAATCATAACTTGCTCCTTAGCCGTTATCGTTTCGAATATGTCATCCTTTTCATTATTTACATCCTTGTCCGAATCGTTGTTCAATATAGTAAACGCCTATAAGAACTTTACCCTTCGTGAACTAATACGTCTATTAAggaaggtgcg > 7:1760630‑M1/1‑141 (MQ=255) aaaaTCATAACTTGCTCCTTAGCCGTTATCGTTTCGAATATGTCATCCTTTTCATTATTTACATCCTTGTCCGAATCGTTGTTCAATATAGTAAACGCCTATAAGAACTTTACCCTTCGTGAACTAATACGTCTATTAAggaaggtgcga > 2:740294‑M1/1‑139 (MQ=255) aaaTCATAACTTGCTCCTTAGCCGTTATCGTTTCGAATATGTCATCCTTTTCATTATTTACATCCTTGTCCGAATCGTTGTTCAATATAGTAAACGCCTATAAGAACTTTACCCTTCGTGAACTAATACGTCTATTAAggaaggtgcgaac < 1:65916‑M1/151‑14 (MQ=255) aaTCATAACTTGCTGCTTAGCCGTTATCGTTTCGAATATGTCATCCTTTTCATTATTTACATCCTTGTCCGAATCGTTGTTCAATATAGTAAACGCCTATAAGAACTTTACCCTTCGTGAACTAATACGTCTATTAAggaaggtgcgaaca < 5:326941‑M1/151‑15 (MQ=255) aaTCATAACTTGCTCCTTAGCCGTTATCGTTTCGAATATGTCATCCTTTTCATTATTTACATCCTTGTCCGAATCGTTGTTCAATATAGTAAACGCCTATAAGAACTTTACCCTTCGTGAACTAATACGTCTATTAAggaaggtgcgaaca < 2:151324‑M1/151‑15 (MQ=255) aTAACTTGCTCCTTAGCCGTTATCGTTTCGAATATGTCATCCTTTTCATTATTTACATCCTTGTCCGAATCGTTGTTCAATATAGTAAACGCCTATAAGAACTTTACCCTTCGTGAACTAATACGTCTATTAAggaaggtgcgaacaagtc > 2:1368844‑M1/1‑133 (MQ=255) aaCTTGCTCCTTAGCCGTTATCGTTTCGAATATGTCATCCTTTTCATTATTTACATCCTTGTCCGAATCGTTGTTCAATATAGTAAACGCCTATAAGAACTTTACCCTTCGTGAACTAATACGTCTATTAAggaaggtgcgaacaagtcc < 3:1728717‑M1/150‑20 (MQ=255) aCTTGCTCCTTAGCCGTTATCGTTTCGAATATGTCATCCTTTTCATTATTTACATCCTTGTCCGAATCGTTGTTCAATATAGTAAACGCCTATAAGAACTTTACCCTTCGTGAACTAATACGTCTATTAAggaaggtgcgaacaagtccct < 1:884930‑M1/151‑22 (MQ=255) aCTTGCTCCTTAGCCGTTATCGTTTCGAATATGTCATCCTTTTCATTATTTACATCCTTGTCCGAATCGTTGTTCAATATAGTAAACGCCTATAAGAACTTTACCCTTCGTGAACTAATACGTCTATTAAggaaggtgcgaacaagtccct > 6:106926‑M1/1‑130 (MQ=255) attgCTCCTTAGCCGTTATCGTTTCGAATATGTCATCCTTTTCATTATTTACATCCTTGTCCGAATCGTTGTTCAATATAGTAAACGCCTATAAGAACTTTACCCTTCGTGAACTAATACGTCTATTAAggaaggtgcgaacaagtccctg < 3:93223‑M1/150‑23 (MQ=255) tGCACCTTACCCGTTATCGTTTCGAATATGTCATCCTTTTCATTATTTACATCCTTGTCCGAATCGTTGTTCAATATAGTAAACGCCTATAACAACTATACCCATCGTGAACTAATACGTCTATTAAggaaggtgcgaacaactcca > 8:777411‑M1/1‑127 (MQ=255) gCTCCTTAGCCGTTATCGTTTCGAATATGTCATACTTTTCATTATTTACATCCTTGTCCGAATCGTTGTTCAATATAGTAAACGCCTATAAGAACTTTACCCTTCGTGAACTAATACGTCTATTAAggaaggtgcgaacaagtccctgat < 6:1159936‑M1/150‑25 (MQ=255) cTTAGCCGTTATCGTTTCGAATATGTCATCCTTTTCATTATTTACATCCTTGTCCGAATCGTTGTTCAATATAGTAAACGCCTATAAGAACTTTACCCTTCGTGAACTAATACGTCTATTAAggaaggtgcgaacaagtccctgatatg > 5:1554010‑M1/1‑122 (MQ=255) gCCGTTATCGTTTCGAATATGTCATCCTTTTCATTATTTACATCCTTGTCCGAATCGTTGTTCAATATAGTAAACGCCTATAAGAACTTTACCCTTCGTGAACTAATACGTCTATTAAggaaggtgcgaacaagtccctgatatgagatca < 8:272862‑M1/151‑34 (MQ=255) cGTTATCGTTTCGAATATGTCATCCTTTTCATTATTTACATCCTTGTCCGAATCGTTGTTCAATATAGTAAACGCCTATAAGAACTTTACCCTTCGTGAACTAATACGTCTATTAAggaaggtgcgaacaagtccctgatatgagatcatg > 5:1342308‑M1/1‑116 (MQ=255) cGTTATCGTTTCGAATATGTCATCCTTTTCATTATTTACATCCTTGTCCGAATCGTTGTTCAATATAGTAAACGCCTATAAGAACTTTACCCTTCGTGAACTAATACGTCTATTAAggaaggtgcgaacaagtccctgatatgagatcatg > 4:116760‑M1/1‑116 (MQ=255) gTTATCGTTTCGAATATGTCATCCTTTTCATTATTTACATCCTTGTCCGAATCGTTGTTCAATATAGTAAACGCCTATAAGAACTTTACCCTTCGTGAACTAATACGTCTATTAAggaaggtgcgaacaagtccctgatatgagatcatgt > 3:303592‑M1/1‑115 (MQ=255) ttCGAATATGTCATCCTTTTCATTATTTACATCCTTCTCCGAATCGTTGTTCAATATAGTAAACGCCTATAAGAACTTTACACTTCGTGAACTAATACGTCAATTAAggaaggtgcgaacaagtccctgatatgagatcatgtatgtcatc > 7:2010913‑M1/1‑107 (MQ=255) gAATATGTCATCCTTTTCATTATTTACATCCTTGTCCGAATCGTTGTTCAATATAGTAAACGCCTATAAGAACTTTACCCTTCGTGAACTAATACGTCTATTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctgg < 3:461459‑M1/151‑48 (MQ=255) aaTATGTCATCCTTTTCATTATTTACATCCTTGTCCGAATCGTTGTTCAATATAGTAAACGCCTATAAGAACTTTACCCTTCGTGAACTAATACGTCTATTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctgg < 2:1252526‑M1/150‑48 (MQ=255) atatGTCATCCTTTTCATTATTTACATCCTTGTCCGAATCGTTGTTCAATATAGTAAACTACTATAAGAACTTTACCCTTCGTGAACTAATAAGTCTATTAACACTAATCAATACTTCAGATTTATACATCACGCACTCCATATATTGAt > 4:369418/1‑150 (MQ=255) atatGTCATCCTTTTCATTATTTACATCCTTGTCCGAATCGTTGTTCAATATAGTAAACGCCTATAAGAACTTTACCCTTCGTGAACTAATACGTCTATTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctgg > 2:1991419‑M1/1‑102 (MQ=255) atatGTCATCCTTTTCATTATTTACATCCTTGTCCGAATCGTTGTTCAATATAGTAAACGCCTATAAGAACTTTACCCTTCGTGAACTAATACGTCTATTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctgg > 7:51935‑M1/1‑102 (MQ=255) tCATCCTTTTCATTATTTACATCCTTGTCCGAATCGTTGTTCAATATAGTAAACGCCTATAAGAACTTTACCCTTCGTGAACTAATACGTCTATTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccat > 4:1434095‑M1/1‑97 (MQ=255) cATCCTTTTCATTATTTACATCCTTGTCCGAATCGTTGTTCAATATAGTAAACGCCTATAAGAACTTTACCCTTCGTGAACTAATACGTCTATTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccata < 6:1968147‑M1/150‑55 (MQ=255) cATCCTTTTCATTATTTACATCCTTGTCCGAATCGTTGTTCAATATAGTAAACGCCTATAAGAACTTTACCCTTCGTGAACTAATACGTCTATTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccat > 6:426628‑M1/1‑96 (MQ=255) cATCCTTTTCATTATTTACATCCTTGTCCGAATCGTTGTTCAATATAGTAAACGCCTATAAGAACTTTACCCTTCGTGAACTAATACGTCTATTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccat > 6:125226‑M1/1‑96 (MQ=255) cATCCTTTTCATTATTTACATCCTTGTCCGAATCGTTGTTCAATATAGTAAACGCCTATAAGAACTTTACCCTTCGTGAACTAATACGTCTATTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccat > 8:1935525‑M1/1‑96 (MQ=255) ccTTTTCATTATTTACATCCTTGTCCGAATCGTTGTTCAATATAGTAAACGCCTATAAGAACTTTACCCTTCGTGAACTAATACGTCTATTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaac < 4:2017567‑M1/151‑59 (MQ=255) ccTTTTCATTATTTACATCCTTGTCCGAATCGTTGTTCAATATAGTAAACGCCTATAAGAACTTTACCCTTCGTGAACTAATACGTCTATTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaa < 8:1557098‑M1/150‑58 (MQ=255) cATTATTTACATCCTTGTCCGAATCGTTGTTCAATATAGTAAACGCCTATAAGAACTTTACCCTTCGTGAACTAATACGTCTATTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggt < 8:1367491‑M1/150‑64 (MQ=255) cATTATTAACATCCTTGTCCGAATCGTTGTTCAATATAGTAAACGCCTATAAGAACTTTACCCTTCGTGAACTAATACGTCTATTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggtt < 2:1880482‑M1/151‑65 (MQ=255) attattTACATCCTTGTCCGAATCGTTGTTCAATATAGTAAACGCCTATAAGAACTTTACCCTTCGTGAACTAATACGTCTATTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttc < 2:66‑M1/151‑66 (MQ=255) attattTACATCCTTGTCCGAATCGTTGTTCAATATAGTAAACGCCTATAAGAACTTTACCCTTCGTGAACTAATACGTCTATTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttc < 7:1520897‑M1/151‑66 (MQ=255) ttattTACATCCTTGTCCGAATCGTTGTTCAATATAGTAAACGCCTATAAGAACTTTACCCTTCGTGAACTAATACGTCTATTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttc > 5:580426‑M1/1‑85 (MQ=255) aCATCCTTGTCCGAATCGTTGTTCAATATAGTAAACGCCTATAAGAACTTTACCCTTCGTGAACTAATACGTCTATTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatga < 5:1451436‑M1/151‑73 (MQ=255) aCATCCTTGTCCGAATCGTTGTTCAATATAGTAAACGCCTATAAGAACTTTACCCTTCGTGAACTAATACGTCTATTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatg < 6:1685562‑M1/150‑72 (MQ=255) cATCCTTGTCCGAATCGTTGTTCAATATAGTAAACGCCTATAAGAACTTTACCCTTCGTGAACTAATACGTCTATTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatg > 4:737211‑M1/1‑78 (MQ=255) ccTTGTCCGAATCGTTGTTCAATATAGTAAACGCCTATAAGAACTTTACCCTTCGTGAACTAATACGTCTATTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtc > 4:536494‑M1/1‑75 (MQ=255) ttGTCCGAATCGTTGTTCAATATAGTAAACGCCTATAAGAACTTTACCCTTCGTGAACTAATACGTCTATTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatc > 5:387320‑M1/1‑73 (MQ=255) gTCCGAATCGTTGTTCAATATAGTAAACGCCTATAAGAACTTTACCCTTCGTGAACTAATACGTCTATTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatca > 4:886267‑M1/1‑71 (MQ=255) tCCGAATCGTTGTTCAATATAGTAAACGCCTATAAGAACTTTACCCTTCGTGAACTAATACGTCTATTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaac > 2:249918‑M1/1‑70 (MQ=255) tCCGAATCGTTGTTCAATATAGTAAACGCCTATAAGAACTTTACCCTTCGTGAACTAATACGTCTATTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaac > 1:265355‑M1/1‑70 (MQ=255) ccGAATCGTTGTTCAATATATTAAACGCCTATAAGAACTTTACCCTTCGTGAACTAATACGTCTATTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaact < 5:1225810‑M1/151‑83 (MQ=255) gAATCGTTGTTCAATATAGTAAACGCCTATAAGAACTTTACCCTTCGTGAACTAATACGTCTATTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaactt > 8:1147282‑M1/1‑67 (MQ=255) cGTTGTTCAATATAGTAAACGCCTATAAGAACTTTACCCTTCGTGAACTAATACGTCTATTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttacctt > 1:123455‑M1/1‑63 (MQ=255) gttgttCAATATAGTAAACGCCTATAAGAACTTTACCCTTCGTGAACTAATACGTCTATTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttc > 7:803477‑M1/1‑62 (MQ=255) gttgttCAATATAGTAAACGCCTATAAGAACTTTACCCTTCGTGAACTAATACGTCTATTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttc < 3:1150571‑M1/151‑90 (MQ=255) cAATATAGTAAACGCCTATAAGAACTTTACCCTTCGTGAACTAATACGTCTATTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgac < 1:1019031‑M1/151‑96 (MQ=255) aaTATAGTAAACGCCTATAAGAACTTTACCCTTCGTGAACTAATACGTCTATTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgaca < 7:1320203‑M1/151‑97 (MQ=255) aaTATAGTAAACGCCTATAAGAACTTTACCCTTCGTGAACTAATACGTCTATTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgaca < 1:1940442‑M1/151‑97 (MQ=255) ataGTAAACGCCTATAAGAACTTTACCCTTCGTGAACTAATACGTCTATTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtg < 1:589549‑M1/151‑100 (MQ=255) taGTAAACGCCTATAAGAACTTTACCCTTCGTGAACTAATACGTCTATTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtg > 7:912031‑M1/1‑51 (MQ=255) aaaaGCCTAAAACAACCTTACCCTTCGTGAACTAATACGTCTATTAACACTAATCAATACTTCAGATTTATCCATCACGCACTCCATATATTGATCCTAAGTAAGATTCCTGGTTGTTATCAGCTTGTAAATAGCAAACAAAAAGTTaa < 2:322652/149‑1 (MQ=255) aaaCTCCTATAAGAACTTTACCCTTCGTGAACTAATACGTCTATTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattc < 8:1764103‑M1/151‑105 (MQ=255) aaCGCCTATAAGAACTTTACCCTTCGTGAACTAATACGTCTATTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattca < 1:1815324‑M1/151‑106 (MQ=255) aCGCCTATAAGAACTTTACCCTTCGTGAACTAATACGTCTATTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcag < 1:450545‑M1/151‑107 (MQ=255) aCGCCTATAAGAACTTTACCCTTCGTGAACTAATACGTCTATTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcag < 1:1369073‑M1/151‑107 (MQ=255) tataAGAACTTTACCCTTCGTGAACTAATACGTCTATTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagt > 6:753363‑M1/1‑40 (MQ=255) aaGAACTTTACCCTTCGTGAACTAATACGTCTATTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagc > 2:1626739‑M1/1‑37 (MQ=255) aaGAACTTTACCCTTCGTGAACTAATACGTCTATTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagc < 5:937404‑M1/151‑115 (MQ=255) aaGAACTTTACCCTTCGTGAACTAATACGTCTATTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaag < 6:1339675‑M1/150‑114 (MQ=255) aGAACTTTACCCTTCGTGAACTAATACGTCTATTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcg > 3:764451‑M1/1‑36 (MQ=255) caaaattaccctTCGTTAACAAATACCTCTATTAAcgaaggtgcgaacaagtccctgaaatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgc < 2:476077‑M1/146‑117 (MQ=255) tttACCCTTCGTGAACTAATACGTCTATTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtc > 5:666484‑M1/1‑31 (MQ=255) ttACCCTTCGTGAACTAATACGTCTATTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtc > 5:1700259‑M1/1‑30 (MQ=255) tACCCTTCGTGAACTAATACGTCTATTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtc > 1:712192‑M1/1‑29 (MQ=255) tACCCTTCGTGAACTAATACGTCTATTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtc > 6:864110‑M1/1‑29 (MQ=255) aCCCTTCGTGAACTAATACGTCTATTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcag < 2:853891‑M1/150‑123 (MQ=255) cccTTCGTGAACTAATACGTCTATTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagac > 8:901668‑M1/1‑27 (MQ=255) ccTTCGTGAACTAATACGTCTATTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagacc < 6:319779‑M1/151‑126 (MQ=255) cTTCGTGAACTAATACGTCTATTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagacc > 5:1009223‑M1/1‑25 (MQ=255) gTGAACTAATACGTCTATTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaa > 5:497662‑M1/1‑21 (MQ=255) tGAACTAATACGTCTATTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaa > 6:549398‑M1/1‑20 (MQ=255) gAACTAATACGTCTATTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaaccgccgtcagaccagaaa > 3:598979‑M1/1‑19 (MQ=255) tCTATTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttg > 1:1695923‑M1/1‑8 (MQ=255) tATTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgt < 8:514737‑M1/150‑145 (MQ=255) aTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtc < 4:1295417‑M1/150‑146 (MQ=255) aTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgt < 1:1159311‑M1/149‑145 (MQ=255) aTTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgt < 6:1889202‑M1/149‑145 (MQ=255) ttAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgccagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtccc > 7:1679664‑M1/1‑4 (MQ=255) ttAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtccc > 5:1143595‑M1/1‑4 (MQ=255) ttAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtccc > 3:1948992‑M1/1‑4 (MQ=255) tAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgcggacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtgccg > 2:1734932‑M1/1‑3 (MQ=255) tAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccg > 3:1295211‑M1/1‑3 (MQ=255) tAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccg > 5:2023120‑M1/1‑3 (MQ=255) aaggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgc > 7:378543‑M1/1‑2 (MQ=255) aaggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgc > 4:11‑M1/1‑2 (MQ=255) aaggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgc > 7:1016843‑M1/1‑2 (MQ=255) aaggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgc > 5:781688‑M1/1‑2 (MQ=255) aaggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccg < 4:1724239‑M1/150‑149 (MQ=255) aaggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccg > 8:1473961‑M1/1‑2 (MQ=255) aaggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccg < 2:957714‑M1/150‑149 (MQ=255) aaggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccg < 8:582513‑M1/150‑149 (MQ=255) aaggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccg < 1:1538355‑M1/150‑149 (MQ=255) aggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgca < 6:1523454‑M1/151‑151 (MQ=255) aggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcctgtcccgc > 4:1536725‑M1/1‑1 (MQ=255) | TCGTCATGAGAAAAATCATAACTTGCTCCTTAGCCGTTATCGTTTCGAATATGTCATCCTTTTCATTATTTACATCCTTGTCCGAATCGTTGTTCAATATAGTAAACGCCTATAAGAACTTTACCCTTCGTGAACTAATACGTCTATTAACACTAATCAATACTTCAGATTTATCCATCACGCACTCCATATATTGATCCTAAGTAAGATTCCTGGTTGTTATCAGCTTGTAAATAGCAAACAAAAAGTTAACGTTTGCGGATTACTGCCCAAGAATAAGTTATCAATAACCAGTTTGTG > DH1/225379‑225678 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |