Predicted mutation
evidence seq id position mutation annotation gene description
JC JC DH1 2,993,356 Δ6 bp :: repeat_region (+) +4 bp :: Δ3 bp coding (338‑341/537 nt) rcdA ← DNA‑binding transcriptional regulator

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? DH1 2993356 =12 (0.020)603 (1.150) 211/300 0.4 98.0% coding (341/537 nt) rcdA DNA‑binding transcriptional regulator
?DH1 = 3577068 NA (NA)noncoding (1198/1201 nt) repeat_region repeat region
* ? DH1 = 299335912 (0.020)467 (0.890) 215/300 0.3 97.4% coding (338/537 nt) rcdA DNA‑binding transcriptional regulator
?DH1 3192074 = NA (NA)noncoding (7/1208 nt) repeat_region repeat region

Only 100 of 1078 total aligned reads displayed.

AGCGGCTTACGGTCGGTGACAAAATGCAGCGTCATCCCCTCAATAAACGCATCAAGCGCGCGGGCGGTTCCGGGTTCAAACCATTGTTCGAGCGTTTGCTGACTGCGCTGCATCCAGTTTTGCATTACCGTTTTTAATAGCGGTTTTCGGCTAGCCAGCGCGTAGAGCTGGTACATCAGCTCCATGTTATCCGGCGTTGCAACCTGTGAGCTGTAGATCATATCGGTGATAGCCTGGCATGCGCCCGGAGCATCACTAACATCGCTAAAAAATGCCTGATATTGCCGGGACATGATCTCA  >  DH1/2993206‑2993505
                                                                                                                                                      |                                                                                                                                                     
ctaaaaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaattgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccc                                                                                                                                                       <  2:1123622‑M1/1‑1 (MQ=255)
ctaaaaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccc                                                                                                                                                       <  2:1297977‑M1/1‑1 (MQ=255)
 taaaaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgtgagaaaaaataggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttcccagcttattcgcaccttccc                                                                                                                                                       <  5:1093981‑M1/1‑1 (MQ=255)
 taaaaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttcccg                                                                                                                                                      <  8:1330682‑M1/2‑2 (MQ=255)
 taaaaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCt                                                                                                                                                      <  2:290098‑M1/2‑1 (MQ=255)
  aaaaactggggataccgccttaaatggcgaagaaacgggctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTa                                                                                                                                                     >  8:1598698‑M1/149‑151 (MQ=255)
  aaaaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCt                                                                                                                                                      <  4:1226355‑M1/2‑1 (MQ=255)
  aaaaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCt                                                                                                                                                      <  4:409891‑M1/2‑1 (MQ=255)
  aaaaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCt                                                                                                                                                      <  6:1986642‑M1/2‑1 (MQ=255)
  aaaaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTa                                                                                                                                                     >  1:1123109‑M1/149‑151 (MQ=255)
  aaaaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTa                                                                                                                                                     >  2:584767‑M1/149‑151 (MQ=255)
  aaaaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTa                                                                                                                                                     >  6:671600‑M1/149‑151 (MQ=255)
  aaaaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTa                                                                                                                                                     >  1:1910113‑M1/149‑151 (MQ=255)
  aaaaactggggataacgccttaaatcgcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCt                                                                                                                                                      >  2:1773263‑M1/149‑150 (MQ=255)
   ggCTTACGGTCGGTGACAAAATGCAGCGTCATCCCCTCAATAAACGCATCAAGCGCGCGGGCGGTTCCGGGTTCAAACCATTGTTCGAGCGTTTGCTGACTGCGCTGCATCCAGTTTTGCATTACCGTTTTTAATAGCGGTTTTCGGCt                                                                                                                                                      >  5:1589434/1‑149 (MQ=255)
   aaaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTa                                                                                                                                                     <  2:1588180‑M1/3‑1 (MQ=255)
   aaaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAg                                                                                                                                                    >  2:1953782‑M1/148‑151 (MQ=255)
    aaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTa                                                                                                                                                     <  3:1266227‑M1/3‑1 (MQ=255)
      actggtgataacggcttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaataatttccccgcttattcgcaccttccCTAGCCa                                                                                                                                                 >  6:1865338‑M1/145‑151 (MQ=255)
       tACGGTCGGTGACAAAATGCAGCGTCATCCCCTCAATAAACGCATCAAGCGCGCGGGCGGTTCCGGGTTCAAACCATTGTTCGAGCGTTTGCTGACTGCGCTGCATCCAGTTTTGCATTACCGTTTTTAATAGCGGTTTTCGGCTAGgga                                                                                                                                                 >  7:263231‑M1/1‑147 (MQ=255)
          ggtcggtGACAAAATGCAGCGTCATCCCCTCAATAAACGCATCAAGCGCGCGGGCGGTTCCGGGTTCAAACCATTGTTCGAGCGTTTGCTGACTGCGCTGCATCCAGTTTTGCATTACCGTTTTTAATAGCGGTTTTCGGCTAGggaaggt                                                                                                                                             >  2:935528‑M1/1‑144 (MQ=255)
            tcggtGACAAAATGCAGCGTCATCCCCTCAATAAACGCATCAAGCGCGCGGGCGGTTCCGGGTTCAAACCATTGTTCGAGCGTTTGCTGACTGCGCTGCATCCAGTTTTGCATTACCGTTTTTAATAGCGGTTTTCGGCTAGggaaggtgc                                                                                                                                           >  3:701752‑M1/1‑142 (MQ=255)
             ataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAGCCAGCGCGTa                                                                                                                                          >  3:910623‑M1/138‑151 (MQ=255)
              taacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAGCCAGCGCGt                                                                                                                                           <  5:1861551‑M1/13‑1 (MQ=255)
              ggtGACAAAATGCAGCGGCATCCCCTCAATAAACGCATCAAGCGCGCGGGCGGTTCCGGGTTCAAACCATTGTTCGAGCGTTTGCTGACTGCGCTGCATCCAGTTTTGCATTACCGTTTTTAATAGCGGTTTTCGGCTAGggaaggtgcga                                                                                                                                         <  4:1873157‑M1/151‑12 (MQ=255)
                 gACAAAATGCAGCGTCATCCCCTCAATAAACGCATCAAGCGCGCGGGCGGTTCCGGGTTCAAACCATTGTTCGAGCGTTTGCTGACTGCGCTGCATCCAGTTTTGCATTACCGTTTTTAATAGCGGTTTTCGGCTAGggaaggtgcgaaca                                                                                                                                      <  1:497384‑M1/151‑15 (MQ=255)
                  gccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAGCCAGCGCGTAGAGCt                                                                                                                                     <  6:826538‑M1/19‑1 (MQ=255)
                      taaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaacttccccgcttattcgcaccttccCTAGCCAGCGCGTAGAGCTGGt                                                                                                                                  >  3:1451081‑M1/129‑150 (MQ=255)
                            gcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAGCCAGCGCGTAGAGCTGGTACATc                                                                                                                             <  1:1568048‑M1/27‑1 (MQ=255)
                                cATCCCCTCAATAAACGCATCAAGCGCGCGGGCGGTTCCGGGTTCAAACCATTGTTCGAGCGTTTGCTGACTGCGCTGCATCCAGTTTTGCATTACCGTTTTTAATAGCGGTTTTCGGCTAGggaaggtgcgaacaagtccctgatatgag                                                                                                                       <  4:876378‑M1/151‑30 (MQ=255)
                                   ccccTCAATAAACGCATCAAGCGCGCGGGCGGTTCCGGGTTCAAACCATTGTTCGAGCGTTTGCTGACTGCGCTGCATCCAGTTTTGCATTACCGTTTTTAATAGCGGTTTTCGGCTAGggaaggtgcgaacaagtccctgatatgagatc                                                                                                                    <  1:972018‑M1/151‑33 (MQ=255)
                                   ccccTCAATAAACGCATCAAGCGCGCGGGCGGTTCCGGGTTCAAACCATTGTTCGAGCGTTTGCTGACTGCGCTGCATCCAGTTTTGCATTACCGTTTTTAATAGCGGTTTTCGGCTAGggaaggtgcgaacaagtccctgatatgagatc                                                                                                                    <  5:1286194‑M1/151‑33 (MQ=255)
                                        cAATAAACGCATCAAGCGCGCGGGCGGTTCCGGGTTCAAACCATTGTTCGAGCGTTTGCTGACTGCGCTGCATCCAGTTTTGCATTACCGTTTTTAATAGCGGTTTTCGGCTAGggaaggtgcgaacaagtccctgatatgagatcatgtt                                                                                                               <  1:1674160‑M1/151‑38 (MQ=255)
                                        cAATAAACGCATCAAGCGCGCGGGCGGTTCCGGGTTCAAACCATTGTTCGAGCGTTTGCTGACTGCGCTGCATCCAGTTTTGCATTACCGTTTTTAATAGCGGTTTTCGGCTAGCCAGCGCGTAGAGCTGGTACATCAGCTCCATGTTATc                                                                                                               >  4:228787/1‑151 (MQ=255)
                                          taaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAGCCAGCGCGTAGAGCTGGTACATCAGCTCCATGTTATCCg                                                                                                             <  6:1605346‑M1/43‑1 (MQ=255)
                                           aaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAGCCAGCGCGTAGAGCTGGTACATCAGCTCCATGTTATCCgg                                                                                                            <  4:1979096‑M1/44‑1 (MQ=255)
                                             ataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAGCCAGCGCGTAGAGCTGGTACATCAGCTCCATGTTATCCGGCg                                                                                                          >  5:1712315‑M1/106‑151 (MQ=255)
                                                 gctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAGCCAGCGCGTAGAGCTGGTACATCAGCTCCATGTTATCCGGCGTTGc                                                                                                      <  3:1564687‑M1/50‑1 (MQ=255)
                                                   tgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAGCCAGCGCGTAGAGCTGGTACATCAGCTCCATGTTATCCGGCGTTGCa                                                                                                     <  5:33910‑M1/51‑1 (MQ=255)
                                                        caaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAGCCAGCGCGTAGAGCTGGTACATCAGCTCCATGTTATCCGGCGTTGCAACCtg                                                                                                >  5:763985‑M1/95‑150 (MQ=255)
                                                         aaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAGCCAGCGCGTAGAGCTGGTACATCAGCTCCATGTTATCCGGCGTTGCAACCtgtg                                                                                              <  7:1131542‑M1/58‑1 (MQ=255)
                                                          aggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAGCCAGCGCGTAGAGCTGGTACATCAGCTCCATGTTATCCGGCGTTGCAACCTGTGa                                                                                             >  1:786158‑M1/93‑151 (MQ=255)
                                                           ggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAGCCAGCGCGTAGAGCTGGTACATCAGCTCCATGTTATCCGGCGTTGCAACCggtg                                                                                              <  2:436687‑M1/58‑1 (MQ=255)
                                                            gcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAGCCAGCGCGTAGAGCTGGTACATCAGCTCCATGTTATCCGGCGTTGCAACCTGTGAGc                                                                                           >  8:1495345‑M1/91‑151 (MQ=255)
                                                            cgggcggTTCCGGGTTCAAACCATTGTTCGAGCGTTTGCTGACTGCGCTGCATCCAGTTTTGCATTACCGTTTTTAATAGCGGTTTTCGGCTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaa                                                                                           <  1:1825275‑M1/151‑58 (MQ=255)
                                                              ggcggTTCCGGGTTCAAACCATTGTTCGAGCGTTTGCTGACTGCGCTGCATCCAGTTTTGCATTACCGTTTTTAATAGCGGTTTTCGGCTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaaca                                                                                         <  1:122281‑M1/151‑60 (MQ=255)
                                                                 tacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAGCCAGCGCGTAGAGCTGGTACATCAGCTCCATGTTATCCGGCGTTGCAACCTGTGAGCTGTa                                                                                       >  7:1251266‑M1/86‑150 (MQ=255)
                                                                      cGGGTTCAAACCATTGTTCGAGCGTTTGCTGACTGCGCTGCATCCAGTTTTGCATTACCGTTTTTAATAGCGGTTTTCGGCTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcat                                                                                 <  4:783682‑M1/151‑68 (MQ=255)
                                                                          ttCAAACCATTGTTCGAGCGTTTGCTGACTGCGCTGCATCCAGTTTTGCATTACCGTTTTTAATAGCGGTTTTCGGCTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatg                                                                             >  3:1863609‑M1/1‑80 (MQ=255)
                                                                          aaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAGCCAGCGCGTAGAGCTGGTACATCAGCTCCATGTTATCCGGCGTTGCAACCTGTGAGCTGTAGATCATATCg                                                                             <  7:909452‑M1/75‑1 (MQ=255)
                                                                          aaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAGCCAGCGCGTAGAGCTGGTACATCAGCTCCATGTTATCCGGCGTTGCAACCTGTGAGCTGTAGATCATATCg                                                                             >  7:1716862‑M1/77‑151 (MQ=255)
                                                                           aaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAGCCAGCGCGTAGAGCTGGTACATCAGCTCCATGTTATCCGGCGTTGCAACCTGTGAGCTGTAGATCATATCgg                                                                            <  8:707113‑M1/76‑1 (MQ=255)
                                                                             aatcggctcacagatgacgaaatgaaatgactgaggcagccgagaagaatttccccgcttattcgcaccttccCTAGCCAGCGCGTAGAGCTTGTACATCAGCTCCATGTTATCCGGCGTTGCAACCTGTGAGCTGTAGATCATATCGGTg                                                                          >  6:977505‑M1/74‑151 (MQ=255)
                                                                             aatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAGCCAGCGCGTAGAGCTGGTACATCAGCTCCATGTTATCCGGCGTTGCAACCTGTGAGCTGTAGATCATATCGGTg                                                                          <  7:1367243‑M1/78‑1 (MQ=255)
                                                                                cggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAGCCAGCGCGTAGAGCTGGTACATCAGCTCCATGTTATCCGGCGTTGCAACCTGTGAGCTGTAGATCATATCGGTGAt                                                                        <  6:1251106‑M1/80‑1 (MQ=255)
                                                                                ccATTGTTCGAGCGTTTGCTGACTGCGCTGCATCCAGTTTTGCATTACCGTTTTTAATAGCGGTTTTCGGCTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtca                                                                        >  6:286163‑M1/1‑74 (MQ=255)
                                                                                        cGAGCGTTTGCTGACTGCGCTGCATCCAGTTTTGCATTACCGTTTTTAATAGCGGTTTTCGGCTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaactta                                                                <  8:263177‑M1/150‑85 (MQ=255)
                                                                                         catgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAGCCAGCGCGTAGAGCTGGTACATCAGCTCCATGTTATCCGGCGTTGCAACCTGTGAGCTGTAGATCATATCGGTGATAGCCTGGCAt                                                              >  4:1418016‑M1/62‑151 (MQ=255)
                                                                                          atgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAGCCAGCGCGTAGAGCTGGTACATCAGCTCCATGTTATCCGGCGTTGCAACCTGTGAGCTGTAGATCATATCGGTGATAACCTGGCATg                                                             >  7:149221‑M1/61‑151 (MQ=255)
                                                                                          aGCGTTTGCTGACTGCGCTGCATCCAGTTTTGCATTACCGTTTTTAATAGCGGTTTTCGGCTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcttcatgagtcatcaacttacgt                                                             >  2:1411319‑M1/1‑64 (MQ=255)
                                                                                          aGCGTTTGCTGACTGCGCTGCATCCAGTTTTGCATTACCGTTTTTAATAGCGGTTTTCGGCTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttacct                                                             <  1:879797‑M1/151‑88 (MQ=255)
                                                                                             gTTTGCTGACTGCGCTGCATCCAGTTTTGCATTACCGTTTTTAATAGCGGTTTTCGGCTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcg                                                          >  1:320083‑M1/1‑61 (MQ=255)
                                                                                             gTTTGCTGACTGCGCTGCATCCAGTTTTGCATTACCGTTTTTAATAGCGGTTTTCGGCTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcg                                                          <  3:604785‑M1/151‑91 (MQ=255)
                                                                                                aaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAGCCAGCGCGTAGAGCTGGTACATCAGCTCCATGTTATCCGGCGTTGCAACCTGTGAGCTGTAGATCATATCGGTGATAGCCTGGCATGCGCCCg                                                       <  8:609925‑M1/97‑1 (MQ=255)
                                                                                                 aatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAGCCAGCGCGTAGAGCTGGTACATCAGCTCCATGTTATCCGGCGTTGCAACCTGTGAGCTGTAGATCATATCGGTGATAGCCTGGCATGCGCCCgg                                                      >  7:626888‑M1/54‑151 (MQ=255)
                                                                                                    gaaatgactgagtcagcggagaagaatttccccgcttattcgcaccttccCTAGCCAGCGCGTAGAGCTGGTACATCAGCTCCATGTTATCCGGCGTTGCAACCTGTGAGCTGTAGATCATATCGGTGATAGCCTGGCATGCGCCCGGAg                                                    >  5:414951‑M1/51‑150 (MQ=255)
                                                                                                     aaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAGCCAGCGCGTAGAGCTGGTACATCAGCTCCATGTTATCCGGCGTTGCAACCTGTGAGCTGTAGATCATATCGGTGATAGCCTGGCATGCGCCCGGAGCa                                                  >  6:1756038‑M1/50‑151 (MQ=255)
                                                                                                      aatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAGCCAGCGCGTAGAGCTGGTACATCAGCTCCATGTTATCCGGCGTTGCAACCTGTGAGCTGTAGATCATATCGGTCATACCCTGCCATGCGCCCGGAGCAt                                                 <  1:1003284‑M1/103‑1 (MQ=255)
                                                                                                         gactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAGCCAGCGCGTAGAGCTGGTACATCAGCTCCATGTTATCCGGCGTTGCAACCTGTGAGCTGTAGATCATATCGGTGATAGCCTGGCATGCGCCCGGAGCATCAc                                              >  8:375776‑M1/46‑151 (MQ=255)
                                                                                                          gcTGCATCCAGTTTTGCATTACCGTTTTTAATAGCGGTTTTCGGCTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaatt                                             <  1:1441220‑M1/151‑104 (MQ=255)
                                                                                                          gcTGCATCCAGTTTTGCATTACCGTTTTTAATAGCGGTTTTCGGCTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacctaccttcgccgacagtgaatt                                             <  7:1789458‑M1/151‑104 (MQ=255)
                                                                                                              cATCCAGTTTTGCATTAGCGTTTTTAATAGCGGTTTTCGGCTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcataaacttaccttcgccgacagtgaattcagc                                         >  5:19458‑M1/1‑44 (MQ=255)
                                                                                                               aTCCAGTTTTGCATTACCGTTTTTAATAGCGGTTTTCGGCTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgacgacagtgaattcagc                                         >  3:1709181‑M1/1‑43 (MQ=255)
                                                                                                                 cagccgagaagaatttccccgcttattcgcaccttccCTAGCCAGCGCGTAGAGCTGGTACATCAGCTCCATGTTATCCGGCGTTGCAACCTGTGAGCTGTAGATCATATCGGTGATAGCCTGGCATGCGCCCGGAGCATCACTAACATc                                       >  5:594766‑M1/38‑150 (MQ=255)
                                                                                                                 cagccgagaagaatttccccgcttattcgcaccttccCTAGCCAGCGCGTAGAGCTGGTACATCAGCTCCATGTTATCCGGCGTTGCAACCTGTGAGCTGTAGATCATATCGGTGATAGCCTGGCATGCGCCCGGAGCATCACTAACATCg                                      >  4:1488543‑M1/38‑151 (MQ=255)
                                                                                                                          agaatttccccgcttattcgcaccttccCTAGCCAGCGCGTAGAGCTGGTACATCAGCTCCATGTTATCCGGCGTTGCAACCTGTGAGCTGTAGATCATATCGGTGATAGCCTGGCATGCGCCCGGAGCATCACTAACATCGCTAAAAAAt                             <  1:605246‑M1/123‑1 (MQ=255)
                                                                                                                               ttcctcgcttattcgcaccttccCTAGCCAGCGCGTAGAGCTGGTACATCAGCTCCATGTTATCCGGCGTTGCAACCTGTGAGCTGTAGATCATATCGGTGATAGCCTGGCATGCGCCCGGAGCATCACTAACATCGCTAAAAAATGCCt                         >  4:627332‑M1/24‑150 (MQ=255)
                                                                                                                               ttccccgcttattcgcaccttccCTAGCCAGCGCGTAGAGCTGGTACATCAGCTCCATGTTATCCGGCGTTGCAACCTGTGAGCTGTAGATCATATCGGTGATAGCCTGGCATGCGCCCGGAGCATCACTAACATCGCTAAAAAATGCCt                         >  6:1428440‑M1/24‑150 (MQ=255)
                                                                                                                               ttccccgcttattcgcaccttccCTAGCCAGCGCGTAGAGCTGGTACATCAGCTCCATGTTATCCGGCGTTGCAACCTGTGAGCTGTAGATCATATCGGTGATAGCCTGGCATGCGCCCGGAGCATCACTAACATCGCTAAAAAATGCCt                         >  3:1135386‑M1/24‑150 (MQ=255)
                                                                                                                               ttccccgcttattcgcaccttccCTAGCCAGCGCGTAGAGCTGGTACATCAGCTCCATGTTATCCGGCGTTGCAACCTGTGAGCTGTAGATCATATCGGTGATAGCCTGGCATGCGCCCGGAGCATCACTAACATCGCTAAAAAATGCCTg                        <  3:137359‑M1/128‑1 (MQ=255)
                                                                                                                                tccccgcttattcgcaccttccCTAGCCAGCGCGTAGAGCTGGTACATCAGCTCCATGTTATCCGGCGTTGCAACCTGTGAGCTGTAGATCATATCGGTGATAGCCTGGCATGCGCCCGGAGCATCACTAACATCGCTAAAAAATGCCTg                        >  7:76273‑M1/23‑150 (MQ=255)
                                                                                                                                 ccccgcttattcgcaccttccCTAGCCAGCGCGTAGAGCTGGTACATCAGCTCCATGTTATCCGGCGTTGCAACCTGTGAGCTGTAGATCATATCGGTGATAGCCTGGCATGCGCCCGGAGCATCACTAACATCGCTAAAAAATGCCTGat                      >  3:406010‑M1/22‑151 (MQ=255)
                                                                                                                                    tttAATAGCGGTTTTCGGCTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccaga                    >  5:970376‑M1/1‑22 (MQ=255)
                                                                                                                                     ttAATAGCGGTTTTCGGCTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaa                   >  8:532614‑M1/1‑21 (MQ=255)
                                                                                                                                       aaTAGCGGTTTTCGGCTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaag                <  2:754802‑M1/151‑133 (MQ=255)
                                                                                                                                        tattcgcaccttccCTAGCCAGCGCGTAGAGCTGGTACATCAGCTCCATGTTATCCGGCGTTGCAACCTGTGAGCTGTAGATCATATCGGTGATAGCCTGGCATGCGCCCGGAGCATCACTAACATCGCTAAAAAATGCCTGATATTGcc                >  6:1134384‑M1/15‑150 (MQ=255)
                                                                                                                                           gCGGTTTTCGGCTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagat            <  7:456226‑M1/151‑137 (MQ=255)
                                                                                                                                           gCGGTTTTCGGCTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagat            <  7:1948028‑M1/151‑137 (MQ=255)
                                                                                                                                             ggTTTTCGGCTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattt          <  6:482689‑M1/151‑139 (MQ=255)
                                                                                                                                             ggTTTTCGGCTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattt          <  3:1995802‑M1/151‑139 (MQ=255)
                                                                                                                                              gTTTTCGTCTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagatttt         <  1:206651‑M1/151‑140 (MQ=255)
                                                                                                                                              gTTTTCGGCTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttacattcgccgacagagaattcagcagtaagcgccgtcagaccagaaaagagatttt         >  3:1041093‑M1/1‑12 (MQ=255)
                                                                                                                                               cccttccCTAGCCAGCGCGTAGAGCTGGTACATCAGCTCCATGTTATCCGGCGTTGCACCCTGTGAGCTGTAGATCATATCGGTGATAGCCTGGCATGCGCCCGGAGCATCACTAACATCGCTAAAAAATGCCTGATATTGCCGGGACATg        <  5:1505387‑M1/144‑1 (MQ=255)
                                                                                                                                               accttccCTAGCCAGCGCGTAGAGCTGGTACATCAGCTCCATGTTATCCGGCGTTGCAACCTGTGAGCTGTAGATCATATCGGTGATAGCCTGGCATGCGCCCGGAGCATCACTAACATCGCTAAAAAATGCCTGATATTGCCGGGACATg        >  4:1749188‑M1/8‑151 (MQ=255)
                                                                                                                                                  tCGGCTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttctt      <  8:1226893‑M1/150‑143 (MQ=255)
                                                                                                                                                  tCGGCTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttctt      <  4:1151919‑M1/150‑143 (MQ=255)
                                                                                                                                                   tccCTAGCCAGCGCGTAGAGCTGGTACATCAGCTCCATGTTATCCGGCGTTGCAACCTGTGAGCTGTAGATCATATCGGTGATAGCCTGGCATGCGCCCGGAGCATCACTAACATCGCTAAAAAATGCCTGATATTGCCGGGACATGAtct    <  8:1921706‑M1/148‑1 (MQ=255)
                                                                                                                                                   cGGCTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttg     <  8:1721006‑M1/150‑144 (MQ=255)
                                                                                                                                                    ccCTAGCCAGCGCGTAGAGCTGGTACATCAGCTCCATGTTATCCGGCGTTGCAACCTGTGAGCTGTAGATCATATCGGTGATAGCCTGGCATGCGCCCGGAGCATCACTAACATCGCTAAAAAATGCCTGATATTGCCGGGACATGAtct    >  5:218931‑M1/3‑150 (MQ=255)
                                                                                                                                                     cCTAGCCAGCGCGTAGAGCTGGTACATCAGCTCCATGTTATCCGGCGTTGCAACCTGTGAGCTGTAGATCATATCGGTGATAGCCTGGCATGCGCCCGGAGCATCACTAACATCGCTAAAAAATGCCTGATATTGCCGGGACATGATCTCa  >  8:1081140‑M1/2‑151 (MQ=255)
                                                                                                                                                      |                                                                                                                                                     
AGCGGCTTACGGTCGGTGACAAAATGCAGCGTCATCCCCTCAATAAACGCATCAAGCGCGCGGGCGGTTCCGGGTTCAAACCATTGTTCGAGCGTTTGCTGACTGCGCTGCATCCAGTTTTGCATTACCGTTTTTAATAGCGGTTTTCGGCTAGCCAGCGCGTAGAGCTGGTACATCAGCTCCATGTTATCCGGCGTTGCAACCTGTGAGCTGTAGATCATATCGGTGATAGCCTGGCATGCGCCCGGAGCATCACTAACATCGCTAAAAAATGCCTGATATTGCCGGGACATGATCTCA  >  DH1/2993206‑2993505

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.