| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | DH1 | 1,065,605 | 0 | A | T | 24.3% | 400.9 / 130.7 | 247 | intergenic (+40/‑23) | ECDH1_RS05245/ECDH1_RS05250 | tRNA‑Arg/tRNA‑Arg |
| Reads supporting (aligned to +/- strand): ref base A (117/67); new base T (47/12); total (166/81) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.52e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.62e-01 | |||||||||||
Only 100 of 264 total aligned reads displayed.
ATCAAAAAATCTGCAGTAAAGTAAGTTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATCTCTTACTTGATATGGCTTTAGTAGCGGTATC‑‑AATATCAGCAGTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTCAGCAATGAAGGTATCGAAGAGGTAGCGGAATTA > DH1/1065455‑1065754 | atgaaatcctCTGCAGTCCCGTAATTTGCCCCTGGCATCGGGAGCTCAGCTGGCGAGACGAATCGGCGAGGATGCGTTGGGTCGTAGGTTGTAATCCTCCCGGATGCACCATCTCTTACTTGATATGGCTTTAGTAGCGGTATC‑‑AATATca < 5:801856/142‑1 (MQ=2) cAAAAAATCTGCAGTAAAGTAAGTTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATCTCTTAATTGATATGCCTTTAGTAGCGGTATC‑‑AATATca > 5:5523/1‑149 (MQ=255) aaaaTCTGCAGTAAAGTAAGTTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATCTCTTACTTGATATGGCTTTAGTAGCGGTATC‑‑AATATCAGCAGt > 5:1992069/1‑151 (MQ=255) tGCAGTAAAGTAAGTTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATCTCTTACTTGATATGGCTTTAGTAGCGGTAGC‑‑AATATCAGGAGTaaatt > 8:465713/1‑148 (MQ=255) taacgtaaTTTCCCCCCTGCATCCGGAGCTCAGCTGGCCATACTAATCGGCTACCAACCGGTGGGTCCCAGCTTCTAATCCTCCCGGATGCACCATCTCTTAATTGATATGGCTTTAGTAGCGGTATC‑‑AATATCAGCAGTAGAATAAGtt < 3:1999512/150‑1 (MQ=2) ccGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATATTACTATATATTCCTGAAGTAGCGGTAGG‑‑AATATCAGCAGTAAAATAAATGTCCCGAtaccta > 7:1104861/1‑144 (MQ=17) ttGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGGTCGAATCCTCCCGGATGCACCATCTCTTACTTGATATGGCTTTAGTAGCGGTATC‑‑AATATCAGCAGTAAAATAAATTTCCCGATGCATCCGTa < 7:346408/149‑1 (MQ=255) aTCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATCTTTTACGAGATATTGATGTATTAGGGGTAGC‑‑AATATGTGCAGTAAAATAAATTTCCCGATGCAtatgaagagc > 7:508749/1‑141 (MQ=17) ccGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTGTCCTAAATATGCATGAATTAACGGATAC‑‑AATATCAACAGTAATATAAATATCCCgctacctaagaagc > 4:648035/1‑133 (MQ=2) aagctggtttttgTACTCGGCGACGAGCGGTCCGGTCGGCGTGTCTAATCCTCCCGGATGCACCATCTCTTACTTGATATGGCTTTATTAGCGGTATC‑‑AATATCAGCAGTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATaga < 8:831904/139‑1 (MQ=14) catacacgacgcgccTACGACCCGAGCGGGCGGAGCTTCCAATCCTCCCGGATTCAACATCTCTTACTTGTTATCGCTTTTGTCGCGGGAGT‑‑AATCTGACGACTTAAATTCTTATCACGATGCATCCGTAGCTCAGCTGGATAGAGTACTc < 7:385819/137‑1 (MQ=9) tAGATTACTCGGTTACGATCGCTTCGGTCTGAGCTTCTAATCCTCCCTGATGCACCATCTCTTACTTTATATGGCTTTAGTAGCGTTATC‑‑AATATCAGCAGTAAATTAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACt < 4:1696121/148‑1 (MQ=14) aacgacgcgacTACGAAACGAGCGGTGTGAGGTGAGAAGACTCGTGGTCTCACCATCTCTTACTTGATCGGGCTTTACTAGCGCTATA‑‑AATATCAGCAGTAAAATAACTTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCt < 1:1223178/141‑1 (MQ=9) tctACTCGGCGACGAGCGCTGCGGTCGTCGGGTCTAATCCTCCCTGATGCACCATCTCTTACTTGATATGGCTTTAGTAGCGGTATC‑‑AATATCAGCAGTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCt < 1:259731/148‑1 (MQ=14) aCTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATCTCTTACTTGATATGGCTTTAGTAGCGGTATC‑‑AATATCAGCAGTAAAATAAATTTCCCGATGCATCAGTAGCACATCTGTATAGAGTACTCGGCTACg > 7:749799/1‑150 (MQ=255) aCTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATGGTACTTGATATGGCTTTAGTAGCGGTATC‑‑AATATCAGCAGTAAAATAAATTTCCCGCTGCAGCCGTAGCGCAGCGGGATTGAGTACTCGGCTTCg > 1:1025177/1‑150 (MQ=21) aCTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATATTACTTGATATTGCTTTATTAGCGGTTTC‑‑AATATCTGGAGTAAATTAAATTTCGCGATACATAAGTAGAACATCTTTTTAGAGTACTCGTCTACg > 8:383575/1‑150 (MQ=18) cGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATCTGGTACTTGATATGGCTGTATGAGCGGTTGG‑‑AATATCAGCAGTAATATAAATTTCCCGATGCCTCCGTAGCACAGCTCGAGAGACTACTCGGCTACGAAc > 7:1570997/1‑150 (MQ=25) gcgacgagcgcgcgggTCGGCGCGTCTAATCCTCCGTGTTTCACCATCTCTTACTTTATATGGCTTTATTAGCTGTATC‑‑AATATCAGCAGTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGa < 6:884503/137‑1 (MQ=14) aCGATCGGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATCTCTTACTTGATATGGCTTTAGTAGCGGTATC‑‑AATATCAGCAGTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCg < 7:70457/151‑1 (MQ=255) cgatcgctccgctCGGCGGGTCTAATCCTCCCGGATTCACCATCTCTTACTTGATATGGCTTTAGTAGCGGTATC‑‑AATATCAGCAGTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCgg < 5:1782397/139‑1 (MQ=14) cgctcggcgcgtctaaTGCTCCCTGATGCACCATCTATTACTTTATATGGCTTTACTAGCTGTATC‑‑AATATCAGCAGTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGtt < 3:1885864/137‑1 (MQ=14) cGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATGGTACTAGATATTGCGATATTAACGGTAAC‑‑AATATCAACAGTAAAATAAATTTCCCGATCCATAAGTAGCTAAGCTGGAGATATTACTCAGGTAAGGAGGGAGCTGTCGTAGGtt > 8:1554066/1‑151 (MQ=16) gctcggcgcgtctaaTCCTCCCGGATTCACCATCTATTACTTTATATGGCTTTAGTAGCTCTATA‑‑AATATCAGCAGTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTc < 1:141452/138‑1 (MQ=14) gTCGTAGGTTCTAATCCTCCCGGATGCACCATCTCTTAATTGATATGGCTTTAGTAGCGGTATC‑‑AATATCAGCAGTAgaataagt < 5:383257/85‑3 (MQ=11) gTCGGAGGTTCGAATCCTCCCGGATGCACCATATATTACTTGATATGCCTGTAGTAACGGATGC‑‑AAGATCTAGAGTAAAATAAATTTCCCGCTGCGTCCGTAGCTCAGCTGGATAGAGAACTCGGCTTCGAGCGGAGCGGTCGGAGGTTct > 2:663455/1‑150 (MQ=17) tCGGAGGTTCGAATCCTCCCGGATGCACCATCTCTTACTTGATATTGCTTTAGTAGCGGTATC‑‑AATATCAGCAGTAAAATAAATTTCCCGATGCATCGGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCTAGCGGTCGGAGGTTCg > 4:2026876/1‑150 (MQ=255) tCGGAGGTTCGAATCCTCCCGGATGCACCATCTCTTACTTGATATGGCTTTAGTAGCGGTATC‑‑AATATcagcag > 7:1651726/1‑74 (MQ=255) cGGAGGTTCGAATCCTCCCGGATGCACCATATTTTACTTGATATTGATTTATTAGCGGTTTG‑‑AATATCTGCAGTAAATTAAATTTCCCGATTCGTAGGTATCTCTTCTGTATACGGTAGTATGCTAAGAACCGTGAGGTCGTAGGTTCGat > 3:782239/1‑150 (MQ=255) cgagtctaagcctccCGTCCGCACCATCTCTTACTTTATATCGTTTTACGAGCGCTATA‑‑AATATCAGCAGTAAACTAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAAtcc < 5:1650793/141‑1 (MQ=14) cGAAGCCTCCCGGATGCACCATCTCTTACTTGATATGTGTTTAGTAGCCGTATC‑‑AATAGCAGCACTAAAATAAATATCCCTCTGCCTCCGTAAGTCAGCTGCAGAGAGTAGGCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTccc < 5:631790/150‑1 (MQ=14) gAATCCTCCCGGATGCACCATCTCTTACTTGATATGGCTTTAGTAGCGGTATC‑‑AATATCAGCAGTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCgg > 7:1800970/1‑151 (MQ=40) gAATCCTCCCGGACGCACCATCTCTTACTTTATAGGGCTTTAGTAGCGCTATC‑‑AATATCAGCAGTAAAATAACTTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCgg < 3:323899/151‑1 (MQ=255) aaTCCTCCCGGATGCACCATCTCTTACTTGATATGGCTTTAGTAGCGGTATC‑‑AATATCAGCAGTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCgg > 7:253732/1‑150 (MQ=40) aaTCCTCCCGGATGCACCATCTCTTACTTGATATGGCTTTAGTAACCGTATA‑‑ACAAGCCCCGGGTAAATTAAATTCACCCTTCATTCTTAGCTAAGCTGGCTAGAGTAATATGATACGAACCGCGCTGGCGGCGGTTGGagtgggcccggc > 7:1931981/1‑140 (MQ=2) aaTCCTCCCGGATGCACCATCTATTACTTGATATGGCTTTAGTAGCGGTATC‑‑AATATGAGCAGTAAAATAAATTTCCCGATGCATCCGTAGCACAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCATCCCgg > 2:1472401/1‑150 (MQ=255) ccGGATGCACCATCTCTTACTTGATATGGCTTTAGTAGCGGTATC‑‑AATATCAGCAGTAtaataag > 6:1627722/1‑64 (MQ=12) ccGGATGCACCATCTCTTACTTGATATGGCTTTAGTAGAGGTATC‑‑AATATAAGCAGTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACAGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCAcc > 7:85846/1‑150 (MQ=255) ccGGAATCACCATCTCTGACGTGAGAGGGGTTTACTAGCGTTATC‑‑AATATCCCCAGTAACCTAAAAATCCCCATGCAGCCGTAGCTCAGCTGGCTAGACTACTCGGCGACGAACCGAGCGGTCCGAGGTTCGAATCCTCCCGGATGCACCa < 1:354603/151‑1 (MQ=9) gCACCATCTCTTACTTGATATGGCTTTAGTAGCGGTATC‑‑AATATCAGCAGTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATtct > 4:837612/1‑151 (MQ=39) ccccgaTCTCTTACGTGATCTGGTTTTACTAGCTGTATA‑‑AATATCTGCAGTAAACTAATTTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATtct < 7:942000/146‑1 (MQ=11) cACCATCTCTTACTTGATATGGCTTTAGTAGCGGTATC‑‑AATATCAGCAGTa < 3:1700646/51‑1 (MQ=35) cACCATCTCTTACTTGATATGGCTTTAGTAGCGGTATC‑‑AATATCAGCAGTAAAATAAATTTCACGATGCATGAGTAGCTCAGCTGGATAGAGTACTAGACTACGAACCGAGCGGTCGGAGGGTCGACTCCTCCCGGATGCACCATATtctc > 4:1614541/1‑151 (MQ=14) cACCATCTCTTACTTGATATGGCTTTAGTAGCGGTATC‑‑AATATCAGCAGTAAAAAAAATTACACCAACCATCAGTACAACAGGTGCATATAGTAATCGGCTACGAACCGATCGGTCGGATCAAAGAATCCTCCCGGATGCGCCATATtgtc > 7:1831018/1‑151 (MQ=9) ccATCTCTTACTTGATATGGCTTTAGTAGCGGTATC‑‑AATATCAGCAGTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCg > 6:406136/1‑151 (MQ=39) tctTACTTGATATGGCTTTAGTAGCGGTATC‑‑AATATCAGCATGGGAATAGAAGACCGGATGCATCCGTACCGCACGAGTATAGACTAATCGCCTAGGCTCCGAGAACTAAGAGGTTCGAGTCCTGCGGGCTGCGCCatcgtctgggacctg > 3:1408250/1‑138 (MQ=2) ctTAGTTGTTATGTGTTTATTACCGTTTTT‑‑AATATCACGAGTATATTAATATCTCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGaaa < 8:1628392/148‑1 (MQ=11) ctTACTTGATATGGCTTTAGTAGCGGTATC‑‑AATATCAGCAGTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTACGaaaac > 6:1061167/1‑148 (MQ=255) aCTTGCTATCGCTGTACTAGCTCTATC‑‑AATATCACCAGTATAATAAAATACGAGCTGCTTCCGATCTTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTCa < 4:954599/151‑1 (MQ=14) aCTTGATATGGCTTTAGTAGCGGTATC‑‑AATATCAGCAGTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTc > 6:564023/1‑150 (MQ=255) cTTGATATGGCTTTAGTAGCGGTATC‑‑AATATCAGCAGTAAAATAAATTTCCCGATGCATCTGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTc > 3:1216483/1‑149 (MQ=255) cTTGATATGGCTTTAGTAGCGGTATC‑‑AATATCAGCAGTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTAGGCTACGAACCGAGCGGTCGGAGGTTCGAATACTCCCGGATGCACCATATTATCCgtagaaagga > 5:1383739/1‑141 (MQ=11) ttGATACGGCTTTAGTAGCGGTATCAAAAAATCTGCAGTAAAGTAAGTTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTGTCCGAGATAttgc > 2:1697222/1‑149 (MQ=14) tGATATGGCTTTAGTAGCGGTATC‑‑AATATCAGCAGTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTCAGc > 1:455340/1‑150 (MQ=255) cTTTAGTAGCGGTATC‑‑AATATCAGCAGTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTCAGCAATGAAGGt > 5:1483379/1‑151 (MQ=255) tttAGTAGCGGTATCAAAAAATCTGCAGTAAAGTAAGTTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATATTCAGCAATGAAgg > 3:433605/1‑151 (MQ=11) tttAGTAGCGGTATCAAAAAATCTGCAGTAAAGTAAGTTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATAATCCTAAATATTCAGAAATTAAgg > 8:250883/1‑151 (MQ=14) tttAGTAGCGGTATC‑‑AATATCAGCAGTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGTAAACTACaacggaacagcg > 8:1372111/1‑139 (MQ=11) tttAGTAGCGGTATC‑‑AATATCAGCAGTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTCAGCAATGAAGGt > 7:1397338/1‑150 (MQ=255) tttAGTAGCGGTATC‑‑AATATCAGCAGTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCAGAAATCTTCAGAAATGAAGGt > 4:1943159/1‑150 (MQ=255) tagtagCGGTATCAAAAAATCTGCAGTAAAGTAAGTTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTCATAAATGaacgat > 2:1547633/1‑147 (MQ=11) tagtagCGGTATCAAAAAATATGCAGTAAAGTAAGTTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTATCCGAAATATTCATCAATTAAggat > 4:23811/1‑149 (MQ=11) tagtagCGGTATC‑‑AATATCAGCAGTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTCAGCAATGAAGGTATc > 3:1488726/1‑151 (MQ=255) tagtagCGGTATC‑‑AATATCAGCAGTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTCAGCAATGAAGGTATc > 3:1120240/1‑151 (MQ=255) agtagCGTTATC‑‑AATATAAGCATTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGTAACCTTCAGCAATGAAGGTa < 2:1964246/148‑1 (MQ=255) agtagCGGTATCAAAAAATCTGCAGTAAAGTAAGTTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTACCGGATGCACCATATTCTACGTTATATTCAGATATTAAgggtt > 5:987917/1‑148 (MQ=14) agtagCGGTATC‑‑AATATCAGCAGTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTCAGCAATGAAGGTAt > 6:471767/1‑149 (MQ=255) gtagCGGTATCAAAAAATCTGCAGTAAAGTAAGTTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATATTCATCAATGAACGTATc > 2:1259928/1‑151 (MQ=1) tagaggtataaaaaaatCTGCAGTAAAGTAAGTTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTCAGCAATGAAGGTATc < 4:433541/135‑1 (MQ=11) tagCGGTATCAAAAAATCTGCAGTAAAGTAAGTTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGACATCTGGAGCAATGAAgggtt > 3:178396/1‑146 (MQ=11) tagCGGTATC‑‑AATATCAGCAGTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTCAGCAATGAAGGTATCGa > 1:1332838/1‑150 (MQ=255) cggtttata‑‑AATATCTGCAGTAAAGTAAGTTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTCAGCAATGAAGGTATCGAag < 7:1544401/146‑1 (MQ=11) agCGGTATCAAAAAATCTGCAGTAAAGTAAGTTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTACGAAATATTcctaaattatcgtat > 2:1108249/1‑134 (MQ=14) agCGGTATCAAAAAATCTGCAGTAAAGTAAGTTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATAATCCGAAATATTCAGAAATGAACGTAACg > 4:1322662/1‑150 (MQ=11) agCGGTATCAAAAAATCTGCAGTAAAGTAAGTTTCCCGATGAATCCGTAGCTCAGCTTGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCTGATGCACCATATTATACTAAATATTCATATATGATGGTAttc > 6:1768614/1‑148 (MQ=14) agCGGTATC‑‑AATATCAGCAGTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTCAGCTATGAAGGTATCGa > 2:969537/1‑149 (MQ=255) agCGGTATA‑‑AATATAAGAATTAAAATATATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCgg < 8:1846110/70‑1 (MQ=17) gCGGTATC‑‑AATATCAGCAGTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTCAGCAATGAAGGTATCGa > 7:1914236/1‑148 (MQ=255) gCGGTATC‑‑AATATCAGCAGTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTCAGCAATGAAGGTATCGa > 5:274995/1‑148 (MQ=255) gCGGTATC‑‑AATATCAGCAGTAAAATAAAATTGCCGATGCGTCCGTAGATCAGCTAGATAGAGTACTCGGCTACGCAACTAGCGGTCGGAGGTTAGAATAATAACTGATGCACCATATTCTCCGAGATCTTGAGCTATGAAGGTAGGGAagg > 8:1468425/1‑150 (MQ=9) cggtatcaaaaaatCTGCAGTAAAGTAAGTTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATAATCCTAAATATTCATGAATGAACGTATGGaat > 8:168579/13‑150 (MQ=11) ggtttaataaTATCTGCAGTAAATTAATTTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTCAGCAATGAAGGTATCGAag < 8:662239/142‑1 (MQ=11) gTATC‑‑AATATCAGCAGTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTCAGCAATGAAGGTATCGAAGAGGt > 8:1136975/1‑151 (MQ=255) tatcaaaaaatCTGCAGTAAACTAACTTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATc < 5:1713512/117‑1 (MQ=11) atcaaaaaatCTGCAGTAAAGTAAGTTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATCTTCTCCGACATATTGCGCTAGCAACGTAAAGAAGAGGt > 3:1150636/9‑151 (MQ=14) tC‑‑AATATCAGCAGTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTg > 1:1935244/1‑49 (MQ=255) ac‑‑AAAATCAGCACTAAAGTAATTTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTAGTCGGCTACTAAGCTCGCGGGCGGTGGTGCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTCAGCAATGAAGGTATCGAAGAGGTAGc < 1:1999146/150‑1 (MQ=14) caaaaaatCTGCAGTAAAGTAAGTTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTACGATATCTTCAGGTATGATGGTATAGAAGATGTac > 3:27167/7‑150 (MQ=11) aaaaaTATCTGCAGTAAATTAATTTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCTGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTCAGCAATGAAGGTATCGAAGAGGTa < 2:37659/147‑1 (MQ=255) taaaTATCAGCAGTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTg < 2:1934979/47‑1 (MQ=255) atataatCTGCAGTAAAGTAAGTTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTCAGCAATGAAGGTATCGAAGAGGTAg < 1:1150489/145‑1 (MQ=255) aaTATCAGCAGTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATATAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTCAGCAATGAAGGTATCGAAGAGGTAGCgg > 1:1613033/1‑151 (MQ=255) aaTATCAGCAGTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTCAGCAATGAAGGTATCGAAGAGGTAGCgg > 5:1117743/1‑151 (MQ=255) aaatCTGCAGTAAAGTAAGTTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTCAGCAATGa < 6:299804/128‑1 (MQ=255) aaatCTGCAGTAAAGTAAGTTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATAATACTAAATATTCATAAAGGAAGGGTTGGAAGAGGtggagg > 8:1981576/3‑145 (MQ=11) aatCTGCAGTAAAGTAAGTTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTACGAAATCTTCATCAATGAACGTATAGAATATGTacagat > 2:1149594/2‑145 (MQ=11) atCAGCACTAAACTACAGTTCCCGCGCCATCCGTAGCTCTGCGGGCTCGAGTCCTCGGCGACGAACCGAGCTGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTCAGCAATGAAGGTATCGAAGAGGTAGCGGAAt < 1:663578/151‑1 (MQ=14) cagcagTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTCAGCAATGAAGGTATCGAAGAGGTAGCGGAAtt > 1:149807/1‑150 (MQ=255) agcagTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCgg > 4:688964/1‑70 (MQ=40) agcagTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTCAGCAATGAAGGTATCGAAGAGGTAGCGGAATTa > 4:1001784/1‑150 (MQ=255) | ATCAAAAAATCTGCAGTAAAGTAAGTTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATCTCTTACTTGATATGGCTTTAGTAGCGGTATC‑‑AATATCAGCAGTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTCAGCAATGAAGGTATCGAAGAGGTAGCGGAATTA > DH1/1065455‑1065754 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |