| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | DH1 | 1,065,614 | 0 | A | G | 23.8% | 389.2 / 143.2 | 250 | intergenic (+49/‑14) | ECDH1_RS05245/ECDH1_RS05250 | tRNA‑Arg/tRNA‑Arg |
| Reads supporting (aligned to +/- strand): ref base A (114/46); new base G (46/4); total (167/83) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.10e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.68e-03 | |||||||||||
Only 100 of 276 total aligned reads displayed.
TGCAGTAAAGTAAGTTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGG‑TCGGAGGTTCGAATCCTCCCGGATGCACCATCTCTTACTTGATATGGCTTTAGTAGCGGTATC‑‑AATATCAGCAGTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTCAGCAATGAAGGTATCGAAGAGGTAGCGGAATTAACCGCAGGCA > DH1/1065466‑1065764 | aagtTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGG‑TCGGAGGTTCGAATCCTCCCGGATGCACCATCTCTTACTTGATATGGCGTTAGTAGGGGTAGC‑‑AATAGCAGCAGTAGATTAAGTTTGCCggg > 5:596896/1‑149 (MQ=18) tatCCCTATGCATCCGTAGCTCATCTTGATAGAGTACTCGGCTACGAAGGGTTCGG‑TCGTAGGGTCGAATCCTCCCGGATGCACCATCTCTTACTTGATATGGCTTTAGTAGCGGTATC‑‑AATATCAGCAGTAAAATAAATTTCCCGATGc < 8:1080059/148‑1 (MQ=21) cagttgtatctttAGATCTGCTGGATAGAGTACTCGGCTACGATGCGAGCGG‑TCGGAGGTTCGAATCCTCCCGGATGCACCATCTCTTACTTGATATGGCTTTAGTAGCGGTATC‑‑AATATCAGCAGTAAAATAAATTTCCCGATGCATCCg < 4:1580811/139‑1 (MQ=21) aTGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGG‑TCGGAGGTTCGAATCCTCCCGGATGCACCATCTCTTACTTGATATGGCTTTAGAAAGGGTAAG‑‑AAGATCTTGAGTAAAAAAAATGTcgcgctcggtcggta > 6:531546/1‑139 (MQ=17) gCATCGGGAGCTGAGCTGGATAGTCTACTCGGCTACGACCGCTTCGG‑TCGGAGCTTCTAATCCTCCCGGATGCACCATCTCTTACTTGATATGGCTTTAGTAGCTGTATC‑‑AATATCAGCAGTAAAATAAATTTCCCGATGCATCCGTAGCt < 7:730657/151‑1 (MQ=18) tAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGG‑TCGGAGGTTCGAATCCTCCCGGATGCACCATCTCTTACTTGATATGGCTTTAGTAGCGGTATC‑‑AATATCAGCAGTAgaata > 3:1772718/1‑121 (MQ=255) gCTCAGCTGGATAGAGTACTCGGCTACTTTTTTATAGG‑TTGGTGGTTCGAATGATAGCTGATGCTCCATATCATATTTTATATTTCTATACTATCTTTATC‑‑AATATCAGCAGTAAATTAATTTTCCCGATGCATCCGTAGCTCAGCTGGAt < 8:1180044/151‑1 (MQ=9) atatAGTACTCTCCTACGATCTGATCCG‑TTGGAGCGTCTAATTCTCCCGGTTGCAACATCTCTTACTTGATATGGCTTTATTAGCGGTATC‑‑AATATCAGCAGTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCg < 8:734726/151‑1 (MQ=14) tttactACTCGGCGACG‑ACCGCGCGGCTCGGCGCGTCTAATCCTCCCGGATGCACCATCTCTTACTTGATATGGCTTTAGTAGCGGTATA‑‑AATATCAGCAGTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCg < 1:614969/145‑1 (MQ=14) cTCGGCTACGAACCGAGCGG‑TCGGAGGTTCGAATCCTCCCGGATGCACCATCTGTTACTAGATATGGCTGTAGTAGCGGTAGG‑‑AAGATCAGCAGTAAAATAAATTTCCCGATGCAGACGTAGCTCAGCTTGATCGAGTACACGGCTACgc > 7:195664/1‑149 (MQ=18) cTCGGCTACGAACCGAGCGG‑TCGGAGGTTCGAATCCTCCCGGATGCACCATATAGTACTTGATATTGATGTAGGAGCGGTTTG‑‑AATATCTGCGGTATGATGAGGTGCCCGATGAATGCGACTCTCAGAGGGATAGAGTGGTCGGCTACGac > 7:617312/1‑150 (MQ=9) ggCTACGAACCGAGCGG‑TCGGAGGTTCGAATCCTCCCGGATGCACCATATGGTACGTTATATGGATATAGGAGCGGTAGC‑‑AATATCATCAGTAAAAAAAAGTTCCCGATGCATAAGAATCACATCGGGATAGAGGTCTCCGCTACgcgcgc > 6:730185/1‑146 (MQ=12) gacgagggcgaggg‑TCGGCGAGTCTAATCCTCGCTTATTCACCATCTCTTACTTGATATGGCTTTAGTAGGGGTATC‑‑AATATCAGCAGTAAACTAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGc < 3:1090376/139‑1 (MQ=14) accggggcgc‑TCGGAGCGTCTAATGCTCCCTGATGCACCATCTCTTACTTGATATGTCTTTAGTAGCGGTATA‑‑AATATCAGCAGTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTc < 3:484388/145‑1 (MQ=14) cGAGCGG‑TCGGAGGTTCGAATCCTCCCGGATGCACCATCTCTTACTTGATATGAAGGTATTAGCGTAATC‑‑AATATCAACAGTAAAATACCATTCCCAATTCATCCGTAGCGCAGGTGCATAGAAAAAACGGCTAGGCACCGAGCGGTCgg > 8:1683796/1‑150 (MQ=12) aGCGG‑TCGGAGGTTCGAATCCTCCCGGATGCACCATATTTTACTTGATATTGCGCTATGAGGGGTTGC‑‑AATATCTGCAGTAAAATAACTTTCCCGATGCGTAGGTAGAGCAGCTGGTTAGAGAGCTAGGGTACGAGACGAGCGGTCGGAgg > 1:1905167/1‑151 (MQ=12) gCGG‑TCGGAGGTTCGAATCCTCCCGGATGCACCATCTTTTCCTAGATATGCATGTAGTAAGGGTAAG‑‑AAGATCTCCAGTAATATAAATATCGCGCTTCATAAGTAGCTCTGCGGGATACAGTAGTCGGCTACGAGCCCAGCGCTGCGAGGt > 5:1531796/1‑151 (MQ=12) ggctcggcgcgtctaaTCCTCGCGGATGCACCATCTTTTAGTTGATATGGCTTTAGTAGCTGTATA‑‑AATATCAGCAGTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGtt < 8:1500856/137‑1 (MQ=11) gg‑TCGGAGCGTCTAATCCTCCCGTATTCAACATCTCTTACTTTATATGGCTTTAGTAGCTGTATC‑‑AATATCAGCAGTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTc < 1:901779/151‑1 (MQ=14) cGGAGGTTCGAATCCTCCCGGATGCACCATCTGGTACGTGATATGGCTTTAGTAGCGGTATG‑‑AATATCAGCAGTAAAATAAATTTCCCGATGCCTCCGTTGCGGAGCGGGATAGAGTCCTCGGCTACGACCCGAGCGGTCGGAGGTTCGat > 3:794784/1‑150 (MQ=17) gcgtctaaTCCTCCCGGATGCACCATCTCTTACTTGATATGGCTTTAGTAGCGGTATC‑‑AATATCAGCAGTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAAtcct < 3:738338/145‑1 (MQ=255) gTTCGAATCCTCCCGGATGCACCATATGGTACTTGATATGCATGTATTAGCGGTTGG‑‑AATATCAGCAGTAAAATAAATTTCCCGATTACAACGTAGCACAGCTGGAGAGAGTTCTAGGCAACGAAACCAGCGGTCGGAGGGTCGATtccgc > 7:1225337/1‑149 (MQ=255) ttCGAATCCTCCCGGATGCACCATCTCTTACTTGATATGGCTTTAGTAGCGGTATC‑‑AATATCAGCAGTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAAtcctcc > 5:1401904/1‑151 (MQ=255) ttCGAATCCTCCCGGATGCACCATATCTTACTTGATATGGCGTAATTAGCGGTTTC‑‑AATATCAGCATTAAAATAAATTTCCCGATGAATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGCTAGGAGCTTCGAAtcctcc > 5:1468621/1‑151 (MQ=14) cGAATCCTCCCGGATGCACCATCTATTACTGGATATCGCGTAATTAAAGCTAAC‑‑AATATCATCAGTAAAATAAATTTCCCGATGAATCAGTAGCTCAGCAGGATAGAGAACTCGGCTACGCTCCGAGCCGTCGGAGGTTACAAtccgcagg > 4:359265/1‑146 (MQ=9) aaTCCTCCCGGATGCACCATCTCTTACTTGATATGGCTTTAGTAGCGGTATC‑‑AATATCAGCAGTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCg < 5:292612/149‑1 (MQ=40) tccCGGATGCACCATCTATTACTTGATATGGCTTTAGTAGCGGTATC‑‑AATATCAGCAGTAAAATAAATTTACCGATGCATCCGTAGCTCAGCTGGATAAAGTACTCGGCAAACAAACGAGCCGTCGGAGGTTCGAATCCGACCGGATGCAc > 2:576901/1‑151 (MQ=14) aTGCACCATCTCTTACTTGATATGGCTTTATGAGCGGTAGC‑‑AAGATCAGAACTAAAATAAATTTCACGAAGCAACAGTACCGGAGGGGGATAGAGTAATCGGCTACGACCCGCGCGGTCGGAGGGTCGAATGCTCCCggcggggcgatatg > 3:30712/1‑139 (MQ=9) ttctatatctgatACTTGATCTCTCTTTATTATCTCTTTC‑‑AAAATCAGTATTAAATTAAATTTCCCGATTCATATGTAGCTTAGCTTTATTGAGTAATCGGCTAGTATCCGTTGGGTCTTTGGTTCTAATCCTCCCGGATGCACCATAtt < 4:951816/138‑1 (MQ=9) cACCATCTCTTACTTGATATGGCTTTAGTAGCGGTATC‑‑AATATCAGCAGTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATtctc > 3:1460301/1‑151 (MQ=39) aCCATCTCTTACTTGATATGGCTTTAGTAGCGGTATC‑‑AATATCAGCAGTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTcc > 3:1843471/1‑151 (MQ=39) aTCTCTTACTTGATATGGCTTTAGTAGCGGTATC‑‑AATATCAGCAGTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGa > 1:1559226/1‑150 (MQ=40) ctTACTTGATATGGCTTTAGTAGCGGTATC‑‑AATATCAGCAGTAAAATAAATTTACCGATGCATACCTAGCTCAGCTGGATAGAGTACTAGGCTACGAACCGAGCCGTCGGAGGTTCGAATCCTCCCCGATGCACCataatatacgtaaaa > 4:610014/1‑138 (MQ=14) ttGATATGGCTTTAGTAGCGGTATC‑‑AATATCAGCAGTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTCAGc > 6:1091111/1‑151 (MQ=255) ttGATATGGCTTTAGTAGCGGTATC‑‑AATATCAGCAGTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATATTc > 8:648363/1‑148 (MQ=255) ttGATACGGCTTTAGTAGCGGTATCAAAAAATCTGCAGTAAAGTAAGTTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCtgcc > 7:1599229/1‑148 (MQ=11) gATATGGCTTTAGTAGCGGTATC‑‑AATATCAGCAGTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTCAGCa > 3:1428237/1‑150 (MQ=255) tacggCTTTAGTAGCGGTATCAAAAAATCTGCAGTAAAGTAAGTTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTACTAAATCTTCataa > 7:172097/4‑147 (MQ=14) tacggCTTTAGTAGCGGTATCAAAAAATCTGCAGTAAAGTAAGTTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATACTACTAAATATTCatga > 8:843415/4‑147 (MQ=14) gtttttgttgggttata‑‑AATATCAGCAGTAAATTAATTTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTCAGCAATGAAgg < 6:918512/138‑1 (MQ=11) gCTTTAGTAGCGGTATCAAAAAATCTGCAGTAAAGTAAGTTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTACTAAATATTCAGCAATGa > 5:1650884/1‑150 (MQ=11) cTTTAGTAGCGGTATCAAAAAATCTGCAGTAAAGTAAGTTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATACTACGAAATATTCatctattaac > 4:1664595/1‑142 (MQ=14) tttATTAGCGGTATC‑‑AATATCATCATTAAATTATATTTCACTATTCATCCGTAGCTCTGTTTTATTCAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTCAGCAATGAAGGt < 4:1552855/150‑1 (MQ=14) tttAGTAGCGGTATCAAAAAATCTGCAGTAAAGTAAGTTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACAGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTATACGAAATATTCAGAAAttagcg > 8:1532995/1‑146 (MQ=14) tttAGTAGCGGTATC‑‑AATATCAGCAGTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTCAGCAATGAAGGt > 2:421481/1‑150 (MQ=255) ttAGTAGCGGTATCAAAAAATCTGCAGTAAAGTAAGTTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCTAAATAttgctgtattatggt > 3:1728838/1‑138 (MQ=14) tagtagCGGTATCAAAAAATCTGCAGTAAAGTAAGTTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCTGAGGTTCGAATCCTCCCGGATGCACCATATTCTACTAAATCTTAAGAAATGAAgct > 8:288810/1‑148 (MQ=11) agtagCGGTATC‑‑AATATCAGCAGTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTCAGCAATGAAGGTATCg > 4:48574/1‑151 (MQ=255) gtaggtttata‑‑AATATCAGCAGTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTCAGCAATGAAGGTATCg < 7:641417/143‑1 (MQ=255) gtagCGGTATCAAAAAATCTGCAGTAAAGTAAGTTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTACTAAATATTCAGAAATTAACGTAt > 6:991548/1‑150 (MQ=11) atcggtatata‑‑AATATCAGCAGTAAACTAACTTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTCAGCAATGAAGGTATCg < 7:844239/143‑1 (MQ=14) tttaggtttaaaaaTATCTGCAGTAAAATAATTTTCCCGATGCATCCGTATCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTCAGCAATGAAGGTATc < 2:82923/138‑1 (MQ=11) taggtctata‑‑AATATCTGCAGTAAATTAATTTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTCAGCAATGAAGGTATCGa < 4:1383379/144‑1 (MQ=11) tagCGGTATCAAAAAATCTGCAGTAAAGTAAGTTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATACTCCTACATATTCAGCAATGAAGGTAtac > 2:986839/1‑149 (MQ=11) tatgtataaaaaaatCTGCAGTAAAGTAAGTTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTCAGCAATGAAGGTATCGa < 8:1752823/137‑1 (MQ=11) gcgctctaaaaaaatCTGCAGTAACATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTCAGCAATGAAGGTATCGaa < 1:95699/138‑1 (MQ=14) gtttata‑‑AAAATCTGCAGTAAATTAATTTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTCAGCAATGAAGGTATCGAagag < 6:371080/148‑1 (MQ=11) cGGTATC‑‑AATATCAGCAGTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTCAGCAATGAAGGTATCGAag > 1:1053372/1‑149 (MQ=255) ggtatcaaaaaatCTGCAGTAAAGTAAGTTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTGTACTAAATATTCATCAATTAAGGTATCGa > 7:791891/12‑148 (MQ=11) ggtataaaaaaatCTGCAGTAAATTAATTTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTCAGCAATGAAGGTATCGAaga < 8:791034/140‑1 (MQ=11) gTATC‑‑AATATCAGCTTTAAAATAAATTTCCCGATGCATCAGTATCTCAGCTGTATAGAGTATTTGGCTACGAAACGATCTTTCGTTGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTCAGCAATGAAGGTATCGAAGAGGt < 6:1466837/151‑1 (MQ=14) tatcaaaaaatCTGCAGTAAAGTAAGTTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTACGAAATATTCAGAAATGAAGGTATAGatcgt > 6:1820352/10‑146 (MQ=11) tATC‑‑AATATCAGCAGTAAAATAACTTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTCAGCAATGAAGGTATCGAAGAGGt < 5:1318658/150‑1 (MQ=255) tATC‑‑AATATCAGCAGTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTCAGCAATGAAGGTATCGAAGAGGt > 8:198449/1‑150 (MQ=255) cgc‑‑AATCTCCGCAGTAAACTAAAATGCCCGATCCATCCGTAGCTCACCTGGATATACGACTCGGCTACGATCGGTTGGGTCGTCGGGTGGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTCAGCAATGAAGGTATCGAAGAGGTa < 7:74807/148‑1 (MQ=9) atcaaaaaatCTGCAGTAAAGTAAGTTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTCAGCAAGGAGGGTATCCAAGAGGt > 1:1171554/9‑151 (MQ=14) aTC‑‑AATATCAGCAGTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATAtt < 2:1717509/113‑1 (MQ=40) c‑‑AATATCAGCAGTAAAATAAATTTCCCGATCCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGACGTCGGAGGTTCGAATCCTCCCGGATGCACCATATACTCCGAAATCTTCATGAATGAAGGTTTCAAAGAggaaccg > 8:397904/1‑146 (MQ=14) ataaaTATCAGCAGTAAATTAACTTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTCAGCAATGAAGGTATCGAAGAGGTAg < 2:1296547/148‑1 (MQ=255) agatatatCTGCAGTAAATTAATTTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTCAGCAATGAAGGTATCGAAGAGGTa < 2:28494/146‑1 (MQ=255) caatatattcataaaaaTAATTTTCCAGTTTTATCCTTACCTAAGCTGTTTAGATCTCTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTCAGCAATGAAGGTATCGAAGAGGTa < 8:616705/135‑1 (MQ=14) aaaaatCTGCAGTAAAGTAAGTTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATATTCCTGAATGAAGGTATCCAATAggaac > 8:245720/5‑146 (MQ=11) atatCAGCAGTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTc < 7:1533372/85‑1 (MQ=255) tatCAGCAGTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGa < 2:1279962/79‑1 (MQ=255) tatCAGCAGTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGa > 1:1281166/1‑79 (MQ=255) tatCAGCAGTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTCAGCAATGAAGGTATCGAAGAGGTAGCGGa > 5:1852817/1‑150 (MQ=255) aatCTGCAGTAAAGTAAGTTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTCAGCAATGAAGGTATCGAAGAGGTAGCGGaa < 4:1798905/150‑1 (MQ=255) aatCTGCAGTAAAGTAAGTTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATACTCCGACATCTTCAGCTATTAAGGTATACAagatcaccagga > 5:1005356/2‑141 (MQ=11) aatCTGCAGTAAAGTAAGTTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATAATCCGAAATCTTCATAAATGAAGGTTTCGaatatgatgagta > 2:706151/2‑139 (MQ=11) atCTGCAGTAAAGTAAGTTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTACGACATATTCAGGAATGAAGGGTTCGAAGATGTAGCGGAAt > 1:728760/1‑151 (MQ=14) tCAGCAGTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTCAGCAATGAAGGTATCGAAGAGGTAGCGGAAtt > 1:360694/1‑151 (MQ=255) tCAGCAGTAAAATAAATTTCCCGATGCATCCGTAGCACAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATACTCCGAAATCTTCAGAAATTAAGGTATCGAAGAGGTAGCGGAAtt > 3:200190/1‑151 (MQ=255) ctgcagTAAAGTAAGTTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATACTACTAAATATTCAGGAATTACGGTTTACAAGAGCTGGAGGaaat > 1:1036439/3‑148 (MQ=11) cagcagTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTCAGCAATGAAGGTATCGAAGAGGTAGCGGAAtt > 7:348417/1‑150 (MQ=255) cagcagTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTCAGCAATGAAGGTATCGAAGAGGTAGCGGAAtt > 2:1109574/1‑150 (MQ=255) agcagTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTTGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTCAGCAATGAAGGTATCGAAGAGGTAGCGGAATTa > 2:197862/1‑150 (MQ=255) agcagTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTc > 3:994743/1‑80 (MQ=39) gcagTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTCAGCAATGAAGGTATCGAAGAGGTAGCGGAATTAAc > 6:259682/1‑151 (MQ=255) cagTAAAATAACTTTCCCGATGCATCCGTAGGTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCGGGATGCACCATATTCTCCGAAATCTTCAGCAATGAAGGTATCGAAGAGGTAGCGGAATTAAcc < 7:1318852/151‑1 (MQ=255) cagTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTCAGCAATGAAGGTATCGAAGAGGTAGCGGAATTAAcc > 3:1220520/1‑151 (MQ=255) cagTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTCGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATAATCTCCGAAATCTTCAGCAATGAAGGTATCGAAGAGGTAGCGGAATTAAcc > 1:476709/1‑151 (MQ=255) agtaaagtaaGTTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTGTACGAAATCTTCAGGTATGAAGGTATCGAAGAggaacagtaaataac > 6:629288/1‑136 (MQ=14) agTAAAATAATTTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTCAGCAATGAAGGTATCGAAGAGGTAGCGGAATTAACCg < 1:165370/151‑1 (MQ=255) gTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTAc > 6:127170/1‑47 (MQ=255) gTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAAcc < 2:953506/60‑1 (MQ=40) tAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTCAGCAATGAAGGTATCGAAGAGGTAGCGGAATTAACCGc > 6:1027387/1‑150 (MQ=255) tAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAAGCTTCAGCAATGAAGGTATCGAAGAGATAGCGGTATTAAcc > 1:1753583/1‑148 (MQ=16) aaaaTAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTCAGCAATGAAGGTATCGAAGAGGTAGCGGAATTAACCGCa < 5:39992/150‑1 (MQ=255) aaataaatTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTCAGCAATGAAGGTATCGAAGAGGTAGCGGAATTAACCGCAgg > 5:1689883/1‑151 (MQ=255) ataattTTCGCTATGAATCCGGAGCTCAGCTGGATAGAGTAGGCGTCTAGCATGCCCTCGGGCGGTGTTGCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTCAGCAATGAAGGTATCGAAGAGGTAGCGGAATTAACCGCAGGCa < 1:818666/151‑1 (MQ=14) | TGCAGTAAAGTAAGTTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGG‑TCGGAGGTTCGAATCCTCCCGGATGCACCATCTCTTACTTGATATGGCTTTAGTAGCGGTATC‑‑AATATCAGCAGTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTCAGCAATGAAGGTATCGAAGAGGTAGCGGAATTAACCGCAGGCA > DH1/1065466‑1065764 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |