Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*DH12,169,5480GT28.6% 509.4 / 62.1 274P671Q (CCG→CAG) rsxCelectron transporter RsxC
Reads supporting (aligned to +/- strand):  ref base G (45/150);  new base T (9/69);  total (54/220)
Fisher's exact test for biased strand distribution p-value = 3.01e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 281 total aligned reads displayed.

GCGGCAACTGCCGCTTTGCGCGGATCAACCTGTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCTTCGACGGCG  >  DH1/2169398‑2169697
                                                                                                                                                      |                                                                                                                                                     
gcgGCAACTGCCGCTTTGCGCGGATCAACCTGTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCGGCTATAAGCGAATAGACAAGTTGTTCTAGATCCTCAATAGCCg                                                                                                                                                       >  2:1655538/1‑151 (MQ=14)
gcgGCAACTGCCGCTTTGCGCGGATCAACCTGTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCg                                                                                                                                                       <  8:1049414/151‑1 (MQ=255)
    cAACTGCCGCTTTGCGCGGATCAACCTGTTCTTCTGGAACCGCATTAGCCTGTTGCTGTTCCAGCTTGAGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCGGCAGTTGGCGGTTg                                                                                                                                                   >  2:756553/1‑151 (MQ=18)
    cAACTGCCGCTTTCCGCGGATCAACCTGTTCTTCTGGTACCGCATTAGCCTGTTGCTGTGCCCGCTTGCGTGCGTTGGCGCGGGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTg                                                                                                                                                   <  4:1159320/151‑1 (MQ=255)
        tGCCGCTTTGCGCGGATCAACCTGTTCTTCTGGAACCGAATAAGCAGGTTGCTGGTAAACCTTGCGTCCTATGTCTAGAGCAATAGCGGCTTCGACTGCTTAATTAAAATGATCGACCTGTTCTTCGCGCTCCGCAGTGGCCgggggcggg                                                                                                                                               >  4:1648397/1‑144 (MQ=2)
         gCCGCTTTGCGCGGATCAACCTGTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGtt                                                                                                                                              <  3:230529/151‑1 (MQ=255)
           cGCTTTGCGCGGATCAACCTGTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTcc                                                                                                                                            <  7:1040479/151‑1 (MQ=255)
            gCTTTGCGCGGATCAACCTGTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGATAGCCCAGCAGCGTAGAGGAGATAAACCTGTTCTTCTCGCTGCGAAATATCCGGTGGCTCTTca                                                                                                                                            >  4:849714/1‑149 (MQ=2)
            gCTTTGCGCGGATCAACCTGTTCTTCTGGTACCGCATTAGCCTGGTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTccc                                                                                                                                           <  3:1068640/151‑1 (MQ=255)
               tttcgcgTATCAACCTGGTCTTCTGGTACCGTATTAGCCTGTTGCTGGTCCAGCTTGCGTGCTTTCGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGt                                                                                                                                         <  6:1581174/147‑1 (MQ=37)
               ttGCGCGGATCAACCTGTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGTGCAATAACAGCTTCACCGCCCGCTTTGCGCCTATAGACCAGTTCATCTCTCTCCGCATTAGGCGGTTGCTGTTca                                                                                                                                            >  7:866562/1‑146 (MQ=14)
                  cgcgGATCAACCTGGTCTTCTGGGACCGCATGAGCCTGGTGCTGTGCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTgc                                                                                                                                     <  3:1499052/151‑1 (MQ=255)
                   gcgGAGCAACCTGTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCCGCTTGCGTGCTTTCGCGCGTGCAATAGCCGCTTCGACTGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTgcg                                                                                                                                    <  3:1617887/151‑1 (MQ=255)
                    cgGATGAACCTGTTCTTCTGGTACCGGATTAGCCTGGTGGTGTTCCAGCTTTCTTGCTTTGGCGCGTGCAATAGCCGCTTCTACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTgcgc                                                                                                                                   <  5:965763/151‑1 (MQ=37)
                    cgGATCAACCTGTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTgcgc                                                                                                                                   >  7:1379442/1‑151 (MQ=255)
                         cAACCTGTTCTTCTGGGACCGCATTAGCCTGGTGCTGGTCCACCTTGCGTGCGTTGGCGCGTGCAATAGCCGCTGCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCttt                                                                                                                              <  6:1464670/151‑1 (MQ=37)
                          aaCCTGTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATATCCTCTTCGCCGGCCGCTTTGCCCGGATCGACCTGTTCATCTGGCTCCGAAGTAGGCGGTTGCTGTTAAAGATTGAGCGCTTTg                                                                                                                             >  1:431692/1‑151 (MQ=14)
                          aaCCTGTTCTTCTGGGACCTGATTAGCCTGGTGCTGTTCCAGCTTGCGTGCGTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTg                                                                                                                             <  1:304868/151‑1 (MQ=255)
                             gtGTTCTTCTGGTACCGCATTAGCCTGGTGCTGTTCCCGCTTTCTTGCTTTGGCGCGGGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCGGGTTGCTGTTCCCGTTTGCGCGCTTTGGCt                                                                                                                          <  5:264975/150‑1 (MQ=37)
                               gTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTc                                                                                                                         <  5:881818/150‑1 (MQ=255)
                                      tGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTATAACCGAATCGACAAGTTGATCTAAATACTCATTAGCCGTTTGCTGATCACGGTTGAGCGCTTTggataaataaat                                                                                                                  >  8:52266/1‑140 (MQ=9)
                                       gggaCCGCATTAGCCTGGTGCTGTTCCAGCTTGCGTGCTTTCGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATa                                                                                                                 <  5:989846/147‑1 (MQ=255)
                                        gttcggCATTATCCTGTTGCTGTTCCTGTTTGCTTGCTTTGGCGCGTGCAATAGCCGCTGCTACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGc                                                                                                               <  6:451446/146‑1 (MQ=21)
                                        gTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGc                                                                                                               <  6:692823/151‑1 (MQ=255)
                                          aCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCCGCTTTGAGCGGATCACCGGGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGGGCTTTGGCTCGGGCAATAGCgg                                                                                                             >  3:599173/1‑151 (MQ=17)
                                            cGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCt                                                                                                           <  6:224003/151‑1 (MQ=255)
                                              gatttcccttgtGCTGTTCCATCTTTAGTGCTTTGGCTCGTGCATTAGCTGTTGCTACTGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTc                                                                                                         <  6:1745668/140‑1 (MQ=18)
                                              cATTAGCGTGTTGCTGTTCCTGCTTGCTTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCtg                                                                                                          <  6:909148/150‑2 (MQ=255)
                                              cATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCGTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTc                                                                                                         <  5:406360/151‑1 (MQ=255)
                                               actAGCCTGGTGCTGTGCCTGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCg                                                                                                        <  2:1078542/149‑1 (MQ=255)
                                                ttAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCGGCTTTGCGCGGATCAACCTCATATGCTGGCTCAGCATTAGCCGGTTGGTGTGCCCGTTTCACAGCTTTGGCTCGGGCtatataggatt                                                                                                          >  2:647110/1‑141 (MQ=17)
                                                  aGCCTGGTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGAc                                                                                                      <  7:74589/150‑1 (MQ=255)
                                                   gCCTGTTGCTGGGCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGAcgg                                                                                                    <  1:748652/151‑1 (MQ=255)
                                                    ccTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCGGCTTTGCGAGCAGCGAAGTGGTCAGGTGGCTCCGCAATTGACGGTACGAGATCCCGTTTGCGGGCTTAGGCTCGTGCAATAGCGGCTTCGCcggg                                                                                                   >  3:1685351/1‑150 (MQ=9)
                                                        gtGCTGTTCCAGCTTGCGGGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCt                                                                                               <  5:1688313/150‑1 (MQ=255)
                                                          gCTGTTCGCGCTTGCGTGCGTTGGCGCGGGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCttt                                                                                             <  1:785643/151‑1 (MQ=255)
                                                          gCTGTTCCAGGTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCTACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCttt                                                                                             <  4:1835824/151‑1 (MQ=255)
                                                           gcggtCCAGCTTGCGGGCGTGGGCGCGGGCAATAGCCGCTTCTACTGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTg                                                                                            <  2:1143734/147‑1 (MQ=17)
                                                             gtgccgggttGCGGGCTTTGGCGCGTGCAATAGCCGCTGCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTgc                                                                                           <  3:483238/142‑1 (MQ=255)
                                                             ggtCCAGCTTGGTTGCGTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTCCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTgc                                                                                           <  1:1038822/148‑1 (MQ=255)
                                                             gTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCGTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTg                                                                                            <  7:1455418/149‑1 (MQ=255)
                                                             gTTCCAGCTTGCGTGCGTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTgcg                                                                                          <  7:808008/151‑1 (MQ=255)
                                                              gtCCAGCGGGCGGGCGTTGGCGCGTGCAATAGCCGCGGCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTgcgc                                                                                         <  1:1433666/150‑1 (MQ=17)
                                                               tCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTgcgc                                                                                         <  1:1001714/150‑1 (MQ=255)
                                                                 cAGCTGGCGCGCGTTGGCTCGTTCAATAGCCGCTGCGCCGCGAGCATCGCGCTGATGGTGCGTGTCTTCCCGACGCGCCCTAGCCCGATGCTGTTCCAGCTTGCGCGCTTTGGCCCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGa                                                                                      <  1:1475890/151‑1 (MQ=2)
                                                                   gCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGGATTAGAAGCTTGCTGTTCGCGTTTGCGGGCTTTGGCACCGCCAATAGATGCTTGGACGGCGGGGTTGCGCGGATc                                                                                    >  1:1315900/1‑151 (MQ=21)
                                                                    gttttttGCTTTTGCGCGTGCATTAGCCGGTTCTACTGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATc                                                                                    <  8:1289833/144‑1 (MQ=17)
                                                                     ttGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGAGGATAACAGTGTACTTCTGGCTCAGACTTAGTCGGGAGCTGTTCCAGTTTGCGGTCTGTGGATCGTGCAAAATCGCCTTCGCcggcgggggtgagcggggccg                                                                                  >  4:939330/1‑136 (MQ=255)
                                                                       gCGTGCTTTGGCGCGGGCAATAGCCGCTGCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGAc                                                                                 <  7:670669/150‑1 (MQ=255)
                                                                        ggggCTTTGGCGCGGGCAATAGCCGCTGCCACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCt                                                                               <  3:280659/148‑1 (MQ=255)
                                                                        cGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCCACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCt                                                                               >  3:962445/1‑151 (MQ=255)
                                                                         tggccttcgcgcTTGCAATAGCCGCGTCTACGGCCGCTTTGCGCTGATCTACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCTGGCGTTTGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCt                                                                               <  6:1134949/142‑1 (MQ=14)
                                                                         gTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCtg                                                                              >  7:81991/1‑151 (MQ=255)
                                                                         gTGCTTTGGCGAGTGCAATAGCCGCTTCTACTGCAGCTTTGCGAGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCTGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCtg                                                                              <  2:557767/151‑1 (MQ=255)
                                                                           gcgttGGCGCGGGCAATAGCCGCGGCCACTGCCGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGGTGCTGGTCCCGTTTGCGGGCTTTGGCTCGGGCAATAGCGGCGTCGACGGCGGCTTTGCGCGGATCGACCtgtt                                                                            <  4:501036/148‑1 (MQ=14)
                                                                           gcctgcgcgcGTGCAATAGCCGCGTGCACTTCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCTGTTGCTGTTCGCGTTTGCGCGCTTTGGCGCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCtgtt                                                                            <  4:723574/145‑1 (MQ=14)
                                                                                ggccccgccAATCGCCGCGGCCACGGCGGCTTTGCGCTGATCGACCTGTTCTTCTTGCTCCGGATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTGTGCCCCTGAAATAGCGGCTTCCACGGCGGCTTTGCGCGGATCGACCTGTTGTTCt                                                                       <  5:1375980/143‑1 (MQ=11)
                                                                                ggCGCGTGCATTTGGCGCTTCTAGGGCCGCTTTGCGCGGATCAACCTGTTCTTCTGGGTCCGCATTAGCCGGTTGGTGTTCCAGCTTGCGGGCTTTGGCTCGGGCAATAGCGGCTTCGACTGCGGCTTTGCGCGGATCGACCTGTTGTTCt                                                                       <  2:1901735/151‑1 (MQ=11)
                                                                                cgcgcGTGCAATAGCCTCTTCTACTGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCTGTTGCTGTTCCAGCTAGCGGGCTTTTGCGCGGGCAATAGCGGCTTCGACTGCGGCTTTGCGCGGATCGACCTGTTGTTCt                                                                       <  8:1930112/150‑1 (MQ=11)
                                                                                 gcgcGTGCAATAGCCGCGTCCACTGCAGCGTTCCTCGGAGCCACCTGCTCTTCTGGGCCCGCATTAGCCTGGTGCTGTTCCCGTTTGCGCGCGTTCGCGCGGGCAATAGCCGCTTCTACGGCGGCTTTGCGCGGATCGACCTGTTGTTCt                                                                       <  7:1812459/150‑1 (MQ=14)
                                                                                  cgcgTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCGACCTGTTGTTCTGGATCGGGGTTGGCCGGTGGGGGGTCCGCCAGGCGCGGTGTGCCAGGGGGTATGGCGGCTTCGCCTGCGTATTTGCGCGGCTCggggtggtgtggtgg                                                                     >  1:513560/1‑137 (MQ=2)
                                                                                  cgcgGGCAATAGCCGCTTCCACTGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTCGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTgg                                                                     <  5:1758138/151‑1 (MQ=255)
                                                                                     gggCAATCGCCGCGGCCACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCTGTTGCTGTTCCCGTTTGCGCGCTTTGGCGCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTc                                                                  <  8:289563/149‑1 (MQ=14)
                                                                                     cccccccacccGCTCCCACCGCCGCTTTGCGCGGATCTACCTCTTGTTCTGGCTCCGCATTAGCCTTTTTCTGTTCCAGCTTGCGTTCTTTTCCACGTGCATTATCCGATTCCACTGCGGCTTTGCGCGGATCGACCTGTTCTTCTGGTTc                                                                  <  6:1048615/142‑1 (MQ=2)
                                                                                      ggCAATAGCCGCTGCTACTGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCTGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCg                                                                 <  3:1794621/150‑1 (MQ=255)
                                                                                       gCAATAGCCGCTTCGACTGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCgg                                                                <  7:1124743/151‑1 (MQ=255)
                                                                                       gCAATAGCCGCTGCTACTGCAGCTTTGCGAGGATCAACCTTTGCTTCTGGCTCCGCATTAGCCTGTTGCTGTTCCCGTTTGCGGGCTTTTGCGCGGGCAATAGCGGCTTCTACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCgg                                                                <  2:895515/151‑1 (MQ=14)
                                                                                          aTAGCCGCTGCCACTGCCTCTTTGCGGGGATCAAGCTGTTCTTCTGGCTCCGCATTATCCTGTTGCTGTTCCTGTTTGCTCGCTTTGGCGCGGGCAATAGCGGCTTCGACGGCCGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCAt                                                             <  4:1698249/151‑1 (MQ=14)
                                                                                            aGCCGCGGCCACTGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCTGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTa                                                           <  1:1168708/151‑1 (MQ=255)
                                                                                                     caCGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCGCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGc                                                  <  5:731250/150‑1 (MQ=255)
                                                                                                         gccgcggtGCGCGGAGCAACCTGGTCTTCTGGCTCCGCATTAGCCTGGTGCTGTTCCCGGTTGCGGGCTTTGGCGCGGGCAATAGCCGCTGCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGtt                                              <  1:32349/144‑1 (MQ=14)
                                                                                                            gcgttGCTCGGATCAAGCTGTTCTTCTGGTTCCGCATTAGGCGGTTGCTGTTCGCGTTTGCTGGCTTTGGCGCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCTACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCa                                           <  2:1566677/148‑1 (MQ=14)
                                                                                                            gCTTTGCGCTGATCAACCTGTTCTTCTGGCTCCTCTTTAGCCGGTTGCTGTTCCCGTTTTCGGGCTTTGGCGCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCa                                           <  3:254413/151‑1 (MQ=14)
                                                                                                            gCTTTGCGCTGAGCAACCTGTTATTCTGGCTCCGGATTAGCCTGTTGCTGGTCCCGTTTGCTCGCTTTCGCGCGGGCAATAGCGGCTTCTACTGCGGCTTTGCGCGGATCTACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCa                                           <  7:647427/151‑1 (MQ=14)
                                                                                                             cgttGCGAGGATCAACCTGTTGTTCTGCCTCCGCATGATCCTGGTGCTGTTCGGGTTTTCGCGCTTTTGCGCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCCACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAg                                          <  5:18747/149‑1 (MQ=14)
                                                                                                               ttGCGCGGATCAACCTGTGCTTCTGGCTCCTGATTAGCCTGGTGCTGTTCGCGTTTGCGGGCTTTTGCTCGGGCAATAGCGGCTTCTACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAg                                          <  5:280210/149‑1 (MQ=14)
                                                                                                               ttGAGCGGAGCCACCTGTGCTGCTCGCTCCGGATTAGCCTGTTGCTGGGCGCGTTTGCTGGCGTTGGCGCGGGCAATAGCGGCGTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGc                                         <  1:1369389/150‑1 (MQ=14)
                                                                                                                 ccggtgATCTACCTCGTCTTATGGCTCCGCATTACCCTTGTGCTGTTCGCGTTTTCGGGCCTGCGCGCGGGCAATAGCGGCTGCTACGGCGGCTTTGCGCGGATCTACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCtt                                       <  8:1149508/145‑1 (MQ=9)
                                                                                                                    ggtaTCAAAGTGTTCTTCGGCCTCCGCTTTAGCCGGGTGCTGGTCGGGTTTTCGCGCTTTGGCTCGGGCAATAGCGGCTGCTACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGt                                   <  1:156522/148‑1 (MQ=14)
                                                                                                                    cgGATCAACCTGTTCTTCTGGCTCGGCATTAGCCGGGTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCCGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGt                                   <  8:1720051/151‑1 (MQ=255)
                                                                                                                     tttgtaaCTTGTTCTTATTGCTCGTTTTTAGCCTTGTGCTGTTCGGGTTTTTTGGCTTTTGCTCGGGCAATAGCGGCTTCTACTGCGGCTTTGCGCGGATCTACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGt                                   <  4:148828/145‑1 (MQ=2)
                                                                                                                         cAACATGTTCTTCTGCTTTCTCTTTATCCTTTTGCTGTTCGCGTTTTCTGGCTTGTGCGCGGGCAATAGCGGCTTCTACTGCCGCTTTGCGCGGATCTAGCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCttt                              <  4:308350/151‑1 (MQ=2)
                                                                                                                              ggTTCTGCTGGCTCGTGATTAGCCTGCTGCTGTGCCCCTACGCGAGCTCTGCATCTGTCTCTAGCGGAGTCGAGTGCGGTTCGGATCTGATCTACCTGTTCTTCTGGCTCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCAc                         <  7:580778/150‑1 (MQ=2)
                                                                                                                               gTTCTTCTGGGACCGCATTAGCCTGGTGCTGTTCGCGTTTGCGCGCTTTGGCGCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACg                        <  1:1849620/151‑1 (MQ=14)
                                                                                                                                 ccctcccgcgccGCATTAGCCGGTTGCTGTTTTTTTTTTAGTTTTTTGGCTCGTGCTATAGCTTCTTAGTCGTAGTCTTTGTTTGGATAGACGTGTTGTTTTGGATCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACg                        <  4:413617/139‑1 (MQ=9)
                                                                                                                                    tctGGCTCCTCAATAGCCTGGTGCTGGTCCCGTTTGCTCGCGTTCGCTCGGGCAATAGCGGCTTCTACTGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCa                    <  3:1178889/150‑1 (MQ=14)
                                                                                                                                    tctGGCTCCGCAAGAGCCTGCTGCTGGTCCCGTTTGCTGGCGTGCGCGCGGGCAATAGCCGCTTCCACGGCGGCTTTGCGCGGATCGACCTGTTCTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACggg                      <  1:853052/148‑1 (MQ=14)
                                                                                                                                      ggcgtgcccaggaGCCGGGTGCGGATCCCGTTTGCGGGCCTGCGCGCGGGCAATAGCCGCGTCGACTGCCGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATa                 <  7:309605/139‑1 (MQ=14)
                                                                                                                                        gtccgcgaTTAGCCTGGTGCTGGTCGCGTTTTCTGGCGTTGGCGCGGGCAATAGCGGCTTCTACTGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGc               <  8:638358/144‑1 (MQ=14)
                                                                                                                                        gCTCCGCATGAGCCGGGTGCTGTTCCCGTTTGCGCGCGTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGc               <  7:1065007/151‑1 (MQ=255)
                                                                                                                                         cTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTc                                                                                                         >  2:1875164/1‑60 (MQ=255)
                                                                                                                                          tCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCACGGGCAATAGCGGCTTCGAcgg                                                                                                    >  5:1141584/1‑64 (MQ=255)
                                                                                                                                          gccGCATTAGCCGGCTGCGGAGCCCGCTGGCGGGCTGTGGCGCGGGGAAGAGCGGCGTGGCGGGCTGCTTTGCGCGGATCTACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCgg             <  3:850767/150‑1 (MQ=14)
                                                                                                                                           gccgaTTAGCCGGGTGCTCTTCCGCTGTGCTGGCCTGTGCGCGGGCAATAGCCGCTTCCACTGCCGCTTTGCGCGGATCCACCTGTTCTTCTGGCTCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCgg             <  1:1122326/146‑1 (MQ=2)
                                                                                                                                           ccGCATTATCCTGTTGCTGTTCCCGTTTGCGCGCTTTCGCTCGGGCAATAGCGGCTGCTACTGCGGCTTTGCGCGGATCTACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCg              <  6:583469/149‑1 (MQ=14)
                                                                                                                                           ccGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCg              <  8:81883/149‑1 (MQ=255)
                                                                                                                                             gCATTATCGGGTGGATCTGCCCGCTTGCGCGCTTTCTCTAGGGGAATCGAGGGGTGGCCGGGGGGCTTGCGCTGATCGACCTGTTGTTCTGGCTCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCtt          <  5:1238856/151‑1 (MQ=9)
                                                                                                                                                  aGCCTGTTTCTGTTCACGATTGGGTTCTGTGGCGCGGGCAATAGCGGCGGCTACTGCCGCTTTGCGCGGATCTACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCTTCGAcg     <  6:1399224/151‑1 (MQ=11)
                                                                                                                                                  aGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCTGCTTCGACGGCGGGTTTGCGGGGATCACCATGGTGTTCTGGGTCGGGAATATCGTGTTCGTGGTCGAGGTAGCGCCCGTGGGATGGGGAAATAGCGGCTTccccg     >  5:542113/1‑147 (MQ=255)
                                                                                                                                                   gCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCTACGGCGGCTTTACGAGGATCAACAAGTTGTTCTGGTTCCTCATTAGACAGTTACAGATCCATCTAGCGAGATATGGAACTGGCAATAgaagctaaaacgg    >  8:1013931/1‑139 (MQ=255)
                                                                                                                                                      |                                                                                                                                                     
GCGGCAACTGCCGCTTTGCGCGGATCAACCTGTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCTTCGACGGCG  >  DH1/2169398‑2169697

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑