Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | DH1 | 3,448,526 | 0 | A | C | 29.5% | 732.7 / 119.4 | 414 | intergenic (‑86/+70) | malZ/proY | alpha‑glycosidase/proline‑specific permease ProY |
Reads supporting (aligned to +/- strand): ref base A (222/67); new base C (0/121); total (223/191) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 0.00e+00 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 447 total aligned reads displayed.
AGCAGTTGATCTTTGCTTTGTTTAACAAATGGGGGCACCGGCAGGTGCCATGCATTTAACATCATAATTCCCCTGTGATGAAAATCTGATCACCTTGCCATAGCCTAATGCAGGATCACTCATCATCTGAAGGATATTTGGGGGAGGAGGACGGGGGCGGATAACTTTCGGAATAGCCGGATCAGGATTTCCTCCTGAACCGGCTTACAGAACGCAAGGATTACTGGTTTTCAGCCAGCTGACGATCGTGGCGGCGTTTAAACATCCAGCCAATCAACAGCACAACAATCCACGCGAAACC > DH1/3448376‑3448676 | aGTTGATCTTTGCTTTGTTTAACAAATGGGGGCACCGGCAGGTGCCATGCATTTAACATCATAATTCCCCTGTGATGAAAATCTGATCACCTTGCCATAGCCTAATGCAGGATCACTCATCATCTGAAGGATATTTGGTGGAGGAGGACgg > 8:573376/1‑151 (MQ=255) gTTGATCTTTGCTTTGTTTAACAAATGGGGGCACCGGCAGGTGCCATGCATTTAACATCATAATTCCCCTGTGATGAAAATCTGATCACCTTGCCATAGCCTAATGCAGGATCACTCATCATCTGAAGGATATTTGGGGGAGGAGGACggg < 1:588979/151‑1 (MQ=255) ttGATCTTTGCTTTGTTTAACAAATGGGGGCACCGGCAGGTGCCATGCATTTAACATCATAATTCCCCTGTGATGAAAATCTGATCACCTTGCCATAGCCTAATGCAGGATCACTCATCATCTGAAGGATATTTGGGGGAGGAGGACgggg > 5:1168588/1‑151 (MQ=255) tGATCTTTGCTTTGTTTAACAAATGGGGGCACCGGCAGGTTCCATGCATTTAACATCATAATTCCCCTGTGATGAAAATCTGATCACCTTGCCATAGCCTAATGCAGGATCACTCATCATCTGAAGGATATTTGGGGGAGGAGGACgggg < 8:1702432/150‑1 (MQ=255) tGATCTTTGCTTTGTTTAACAAATGGGGGCACCGGCAGGTGCCATGCATTTAACATCATAATTCCCCTGTGATGAAAATCTGATCACCTTGCCATAGCCTAATGCAGGATCACTCATCATCTGAAGGATATTTGGGGGAGGAGGACggggg > 5:438041/1‑151 (MQ=255) tGATCTTTGCTTTGTTTAACAAATGGGGGCACCGGCAGGTGCCATGCATTTAACATCATAATTCCCCTGTGATGAAAATCTGATCACCTTGCCATAGCCTAATGCAGGATCACTCATCATCTGAAGGATATTTGGGGGAGGAGCACgcggg > 3:783421/1‑151 (MQ=255) tCTTTGCTTTGTTTAACAAATGGGGGCACCGGCAGGTGCCATGCATTTAACATCATAATTCCCCTGTGATGAAAATCTGATCACCTTGCCATAGCCTAATGCAGGATCACTCATCATCTGAAGGATATTTGGGGGAGGAGGACGGGGGCgg > 4:1513012/1‑151 (MQ=255) ctttgctttgTTTAACAAATGGGGGCACCGGCAGGTGCCATGCATTTAACATCATAATTCCCCTGTGATGAAAATCTGATCACCTTGCCATAGCCTAATGCAGGATCACTCATCATCTGAAGGATATTTGGGGGAGGAGGACGGGGGCgg > 3:1381386/1‑150 (MQ=255) gctttgTTTAACAAATGGGGGCACCGGCAGGTGCCATGCATTTAACATCATAATTCCCCTGTGATGAAAATCTGATCACCTTGCCATAGCCTAATGCAGGATCACTCATCATCTGAAGGATATTTGGGGGAGGAGGACGGGGGCGGATAAc > 1:366648/1‑151 (MQ=255) ttttAACAAATGGGGGCTCCGGCAGGTGCCTTGAAATTAACATCATAATTCCCCTGTTATGAAAATCTCATCACCTTGCCATTGCCTAATGCAGGATCTCTCATCATCTGAAGTATATTTGGGGGCGGAGGACGGGGGCGGATAACTTTc < 4:1794233/149‑1 (MQ=255) tttaaaCAAATGGGGGCACCGGCAGGTGCCATTAATTTAAAATCATAATTCCCCTTTGATTAAAATCTGATCACCTTGCCATAGCCTAATGCAGGATCACTCATCATCTTAAGTATATTTGGGGGCGGCGGCCGGGGGCGGATAACTTTc < 6:1321358/146‑1 (MQ=255) tAACAAATGGGGGCACCGGCAGGTGCCATGCATTTAACATCATAATTCCCCTGTTATCAAAATCTGATCACCTTGCCATAGCCTAATGCAGGATCACTCATCATCTGAAGTATTTTTGGGGGAGGAGGACGGGGGCGGATAACTTTCGGa < 1:1849340/150‑1 (MQ=255) tAACAAATGGGGGCACCGGCAGGTGCCATGCATTTAACATCATAATTCCCCTGTGATGAAAATCTGATCACCTTGCCATAGCCTAATGCAGGATCACTCATCATCTGAAGGATATTTGGGGGAGGAGGACGGGGGCGGATAACTTTCGGa > 7:327313/1‑150 (MQ=255) aaCAAATGGGGGCACCGGCAGGTGCCATGCATTTAACATCATAATTCCCCTGTGATGAAAATCTGATCACCTTGCCATAGCCTAATGCAGGATCACTCATCATCTGAAGGATATTTGGGGGAGGAGGACGGGGGCGGATAACTTTCGGAAt > 4:281892/1‑151 (MQ=255) cAAATGGGGGCACCGGCAGGTGCCATGCATTTAACATCATAATTCCCCTGTGATGAAAATCTGATCACCTTGCCATAGCCTAATGCAGGATCACTCATCATCTGAAGGATATTTGGGGGAGGAGGACGGGGGCGGATAACTTTCGGAAt > 1:1310030/1‑149 (MQ=255) aaaTGGGGGCACCGGCAGGTGCCATGCATTTAACATCATAATTCCCCTGTGATGAAAATCTGATCACCTTGCCATAGCCTAATGCAGGATCACTCATCATCTGAAGGATATTTGGGGGAGGAGGACGGGGGCGGATAACTTTCGGAATAGc > 3:912218/1‑151 (MQ=255) aaTGGGGGCACCGGCAGGTGCCATGCATTTAACATCATAATTCCCCTGTGATGAAAATCTGATCACCTTGCCATAGCCTAATGCAGGATCACTCCTCATCTGAAGGATATTTGGGGGAGGAGGACGGGGGCGGATAACTTTCGGAATAGcc > 1:713408/1‑151 (MQ=255) aggggcgCACCGGCAGGTGCCATGAATAAAACATAATAAATCGCCTTTGATTAAAATCTTATCACCTTGCCATTGCCTAATCCACGATCACCCATCATCTCAAGCATATTTGGGGGCGGCGGACGGGGGCGGATAACTTTCGGAATAGCCg < 2:1887564/149‑1 (MQ=255) tGGGGGCACCGGCCGGTTCCATTCATTAAAAATAATAATTCCCCTGTCATGAAAATCTGATCACCTTGCCATACCCTAATGCAGGATCACTCATCATCTGAAGGTTATTGGGGGGCGGAGGCCGGGGGCGGATAACTTTCGGAATAGCCg < 7:829463/150‑1 (MQ=255) gggcgcccgggCAGGTGACATTCATTTAAAATAATAATTCCCCTGTTATCAAAATCTGATCACCTTGCAATAGCCTAATGCAGGATCACTCATCATCTGAAGTATATTTGGGGGCGGCGGCCGGGCGCGGATAACTTTCGGAATAGCCgg < 2:1714799/141‑1 (MQ=255) cccGGCAGGTGCCATTCATTTAAAATCATAATTCCCCTTTGATCAAAATCTGATCACCTTGCCATACACTAATGCAGCATCACTCATCATGTGAAGGATTTTTGGGGGCGGAGGACGGGGCCGGATAACTTTCGGAATAGCCGGATCAGGa < 5:1953483/150‑1 (MQ=255) ccGGCAGGTGCCATGCATTTAACATCATAATTCCCCTGTGATGAAAATCTGATCACCTTGCCATAGCCTAATGCAGGATCACTCATCATCTGAAGGATATTTGGGGGAGGAGGACGGGGGCGGATAACTTTCGGAATAGCCGGATCAGGAt > 1:637500/1‑151 (MQ=255) ggTGCCATGCATTTAACATCATAATTCCCCTGTGATGAAAATCTGATCACCTTGCCATAGCCTAATGCAGGATCACTCATCATCTGAAGGATATTTGGGGGAGGAGGACGGGGGCGGATAACTTTCGGAATAGCCGGATCAGGATTtcctc > 6:1618924/1‑151 (MQ=255) gCCATGCATTTAACATAATAATCCCCCTGTGATGAAAATCTGATCACCTTGCCATAGCCTAATGCAGGATCACTCATCATCTGAAGGATTTTTGGGGGCGGAGGAGGGGGGCGGATAACTTTCGGAATAGCCGGATCAGGATTTcctcct < 2:150745/150‑1 (MQ=255) atccaattAACATCCAAATCCCCCTGTGATGAAACCCTGCTCACCTTGCCCTCCCCTACTGCAGGATCACGCATCATCTGAAGGATATGGGGGGGAGGCGGCCGGGGGCGGATAACTTTCGGAATAGCCGGATCAGGATTTCCTCCTGAAc < 6:1180982/145‑1 (MQ=255) aTGCATTTAACATCATAATTCCCCTGTGATGAAAATCTGATCACCTTGCCATAGCCTAATGCAGGATCACTCATCATCTGAAGGATATTTGGGGGAGGAGGACGGGGGCGGATAACTTTCGGAATAGCCGGATCAGGATTTCCTCCTGAAc > 8:1268679/1‑151 (MQ=255) attaatcatcatACTTCCCCTTTGTTGAAACTCTGATCACCTCGCCATACCCTCCTCCCGCCCCCCTCCTCATCTGATGGATATGTGGCGGCGGCGGCCGGGCGCGGATAACTTTCGGAATAGCCGGATCAGGATTTCCTCCTGAACCGGc < 2:1330106/145‑1 (MQ=255) aTTTAACATCATAATTCCCCTGTGATGAAAATCTGATCACCTTGCCATAGCCTAATGCAGGATCACTCATCATCTGAAGGATATTTGGGGGAGGAGGACGGGGGCGGATAACTTTCGGAATAGCCGGATCAGGATTTCCTCCTGAACCGGc > 5:1808407/1‑151 (MQ=255) tttAACATCATAATTCCCCTGTGATGAAAATCTGATCACCTTGCCATAGCCTAATGCAGGATCACTCATCATCTGAAGGATATTTGGGGGAGGAGGACGGGGGCGGATAACTTTCGGAATAGCCGGATCAGGAGTTCCTCCTGAACCGGCt > 7:1702874/1‑151 (MQ=255) aaaaCATCATAATACCCCTGTCATCAAAATCCGACCACCTCCCCATCGCCTAATGCAGCATCACTCATCATCTGACGTATATTGGGGGGAGGCGGCCGGGGGCGGATAACTTTCGGAATAGCCGGATCAGGATTTCCTCCTGAACCGGCtt < 1:1590303/149‑1 (MQ=255) tAACATCATAATTCCCCTGTGATGAAAATCTGATCACCTTGCCATAGCCTAATGCAGGATCACTCATCATCTGAAGGATATTTGGGGGAGGAGGACGGGGGCGGATAACTTTCGGAATAGCCGGATCAGGATTTCCTCCTGAACCGGCtt > 1:851634/1‑150 (MQ=255) aaacaacAGAAGTCCCCTGGGACCAAACTCGCAGCACCTTCCCATCCCCTCAACCAGCCTCACTCATCAGCTGACGGATATTGGGGGGCGGCGGCCGGGGGCGGATAACTTTCGGAATAGCCGGATCAGGATTTCCTCCTGAACCGGCTTa < 7:450266/150‑1 (MQ=255) aaCATCATAATTCCCCTGTGATGAAAATCTGATCACCTTGCCATAGCCTAATGCAGGATCACTCATCATCTGAAGGATATTTGGGGGAGGAGGACGGGGGCGGATAACTTTCGGAATAGCCGGATCACGATTTCCTCCTGAACCGGCTTAc > 7:971015/1‑151 (MQ=255) atatagccccAGTGATGAAACTCAGATCTCCATGCCTTACCCTAATGCCCGCGCCCTCATCATCAGAGCGATATTGGGGGGGGGCGCCCGGGGGCGGATAACTTTCGGAATAGCCGGATCAGGATTTCCTCCTGAACCGGCTTACAGAACg < 5:1295112/145‑1 (MQ=255) atAATGCCCCTTTGAACAAAATCTGATCCCCTTGCCATCGCCTAATGCCCCATCACTCATCATCTGAAGGATTTTTGGGGGCGGCGGCCGGGGCCGGATAACTTTCGGAATAGCCGGATCAGGATTTCCTCCTGAACCGGCTTACAGAACg < 6:541834/151‑1 (MQ=255) tAATTCCCCTGTGATGAAAATCTGATCACCTTGCCATAGCCTAATGCAGGATCACTCATCATCTGAAGGATATTTGGGGGAGGAGGACGGGGGCGGATAACTTTCGGAATAGCCGGATCAGGATTTCCTCCTGAACCGGCTTACAGAACGc > 1:1430432/1‑151 (MQ=255) aaTTCCCCTGTGATGAAAATCTGATCACCTTGCCATAGCCTAATGCAGGATCACTCATCATCTGAAGGATATTTGGGGGAGGAGGACGGGGGCGGATAACTTTCGGAATAGCCGGATCAGCATTTCCTCCTGAACCGGCTTACAGAACGc > 2:672315/1‑150 (MQ=255) aTTCCCCTGTGATTAAAATCTTCTCACCTTGCCATATCCTAATGCAGTATCACTCATAATCTGTTGGATTTTGGGGGGCGGCGGACGGGGGCGGATAACTTTCGGAATAGCCGGATCAGGATTTCCTCCTGAACCGGCTTACAGAACGCaa < 2:1654115/151‑1 (MQ=255) aTTCCCCTGTGATCAAAATCTGATCACCTTGCCATCGCCTAATGCAGGATCACTCATCATCTCAAGTTTATTTGGGGGCGGAGGCCGGGGGCGGATAACTTTCGGAATAGCCGGATCAGGATTTCCTCCTGAACCGGCTTACAGAACGCaa < 4:1132107/151‑1 (MQ=255) aTTCCCCTCTCAAGAAACTCTCCTCACCCCGCCATCCCCTAATGCAGCATCACTCATCATCTGAAGGATATTTGGGGGCGGCGCCCGCGCGCGGATAACTTTCGGAATAGCCGGATCAGGATTTCCTCCTGAACCGGCTTACAGAACGCaa < 6:608277/151‑1 (MQ=255) ttCCCCTGTGATGAAAATCTGATCACCTTGCCATAGCCTAATGCAGGATCACTCATCATCTGAAGGATATTTGGGGGAGGAGGACGGGGGCGGATAACTTTCGGAATAGCCGGATCAGGATTTCCTCCTGAACCGGCTTACAGAACGCa > 1:1666165/1‑149 (MQ=255) tCCCCTGTCATTAAAATCTGATCACCTTGCCAAACCCTAATCCAGCATCCCTCATCATCTTAAGGATATGTGGGGGCGGCGGCCGGGGGCGGATAACTTTCGGAATAGCCGGATCAGGATTTCCTCCTGAACCGGCTTACAGAACGCAAg < 8:1469850/150‑1 (MQ=255) ccccTGTGATGAAAATCTGATCACCTTGCCATAGCCTAATGCAGGATCACTCATCATCTGAAGGATATTTGGGGGAGGAGGACGGGGGCGGATGACTTTCGGAATAGCCGGATCAGGATTTCCTCCTGAACCGGCTTACAGAACGCAAgg > 1:1064226/1‑150 (MQ=255) gtgATTAAAATCTCATCACCTTCCCAAAGCCTAATCCAGGATCACTCATCATCTGAAGGATATTGGGGGGAGGAGGACGGGGCCGGATAACTTTCGGAATAGCCGGATCAGGATTTCCTCCTGAACCGGCTTACAGAACGCAAGGATTa < 1:1543262/149‑1 (MQ=255) tataaaaatgttttaaCCTTGCGATAGCCTACTGCAGGATCACTCATCATCTGTAGTATTTTTGGGGGAGGAGGACGGGGGCGGATAACTTTCGGAATAGCCGGATCAGGATTTCCTCCTGAACCGGCTTACAGAACGCAAGGATTACTg < 1:246313/135‑1 (MQ=255) atgaAAATCTCCTCCCCTTGCCAGACCCTAATCCAGCATCACTCCTCATCGGACGGCTATGGGGGGGCGGCGCCCGCGGGCGGATAACTTTCGGAATAGCCGGATCAGGATTTCCTCCTGAACCGGCTTACAGAACGCAAGGATTACTGGt < 7:1369632/151‑1 (MQ=255) tgaAAATCTGATCACCTTGCCATAGCCTAATGCAGCATCACTCATCATCTGAAGGATATTTGGGGGAGGAGGACGGGGGCGGATAACTTTCGGAATAGCCGGATCAGGATTTCCTCCTGAACCGGCTTACAGAACGCAAGGATTACTGGtt > 6:1122327/1‑151 (MQ=255) aaaaaTCTGACCACCTTGCCATCGCCTAATGCAGCATCACTCATCATCTGAAGGATATTTGGGGGAGGAGGACGGGGGCGGATAACTTTCGGAATAGCCGGATCAGGATTTCCTCCTGAACCGGCTTACAGAACGCAAGGATTACTGGttt < 5:162953/150‑1 (MQ=255) aaaaTCTGATCCCCTTCCCATACCCTAATGCAGGATCACTCATCATCTGAAGGATATTTGGGGGAGGCGGCCGGGGGCGGATAACTTTCGGAATAGCCGGATCAGGATTTCCTCCTGAACCGGCTTACAGAACGCAAGGATTACTGGtttt < 6:853191/151‑1 (MQ=255) aaaaTCTGATCACCTTGCCATAGCCTAATGCAGCATCACTCATCATCTGAAGGTTTTTTGGGGGCGGAGGCCGGGGGCGGATAACTTTCGGAATAGCCGGATCAGGATTTCCTCCTGAACCGGCTTACAGAACGCAAGGATTACTGGtttt < 4:1345718/151‑1 (MQ=255) aaTCTGATCACCTTGCCATAGCCTAATGCAGGATCACTCATCATCTGAAGGATATTTGGGGGAGGAGGACGGGGGCGGATAACTTTCGGAATAGCCGGATCAGGATTTCCTCCTGAACCGGCTTACAGAACGCAAGGATTACTGGTTTTc > 5:566834/1‑150 (MQ=255) tCTGATCACCTTGCCATAGCCTAATGCAGGATCACTCATCATCTGAAGGATATTTGGGGGAGGAGGACGGGGGCGGATAACTTTCGGAATAGCCGGATCAGGATTTCCTCCTGAACCGGCTTACAGAACGCAAGGATTACTGGTTTTcagc > 2:436991/1‑151 (MQ=255) cTGATCACCTTGCCATAGCCTAATGCAGGATCACTCATCATCTGAAGGATATTTGGGGGAGGAGGACGGGGGCGGATAACTTTCGGAATAGCCGGATCAGGATTTCCTCCTGAACCGGCTTACAGAACGCAAGGATTACTGGTTTTcagcc > 6:1907840/1‑151 (MQ=255) tGATCACCTTGCCATAGCCTAATGCAGGATCACTCATCATCTGAAGGATATTTGGGGGAGGAGGACGGGGGCGGATAACTTTCGGAATAGCCGGATCAGGATTTCCTCCTGAACCGGCTTACAGAACGCAAGGATTACTGGTTTTcagcc > 6:1725738/1‑150 (MQ=255) tCACCTTGCCATAGCCTAATGCAGGATCACTCATCATCTGAAGGATATTTGGGGGAGGAGGACGGGGGCGGATAACTTTCGGAATAGCCGGATCAGGATTTCCTCCTGAACCGGCTTACAGAACGCAAGGATTACTGGTTTTCAGCCAGCt > 1:1012693/1‑151 (MQ=255) gccccTTGCCATCGCCTAATGCAGGATCACTCATCATCTGAAGGTTATTTGGGGGCGGCGGCCGGGGGCGGATAACTTTCGGAATAGCCGGATCAGGATTTCCTCCTGAACCGGCTTACAGAACGCAAGGATTACTGGTTTTCAGCCAGCt < 6:350529/148‑1 (MQ=255) cACCTTGCCATAGCCTAATGCAGGATCACTCATCATCTGAAGGATATTTGGGGGAGGAGGACGGGGGCGGATAACTTTCGGAATAGCCGGATCAGGATTTCCTCCTGAACCGGCTTACAGAACGCAAGGATTACTGGTTTTCAGCCAGCTg > 7:1161211/1‑151 (MQ=255) ccTTGCCATAGCCTAATGCAGGATCACTCATCATCTGAAGGATATTTGGGGGAGGAGGACGGGGGCGGATAACTTTCGGAATAGCCGGATCAGGATTTCCTCCTGAACCGGCTTACAGAACGCAAGGATTACTGGTTTTCAGCCAGCTGAc > 2:1078626/1‑151 (MQ=255) cTTGCCATAGCCTAATGCAGGATCACTCATCATCTGAAGGATATTTGGGGGAGGAGGACGGGGGCGGATAACTTTCGGAATAGCCGGATCAGGATTTCCTCCTGAACCGGCTTACAGAACGCAAGGATTACTGGTTTTCAGCCAGCTGACg > 8:76474/1‑151 (MQ=255) agacTAATGCAGGATCACTCATCATCTGAATGATTTTTGGGGGAGGAGGAGGGGGGCGGATAACTTTCGGAATAGCCGGATCAGGATTTCCTCCTGAACCGGCTTACAGAACGCAAGGATTACTGGTTTTCAGCCAGCTGACGATCGTgg < 8:454144/147‑1 (MQ=255) cTAATGCAGGATCACTCATCATCTGAAGGATATTTGGGGGAGGAGGACGGGGGCGGATAACTTTCGGAATAGCCGGATCAGGATTTCCTCCTGAACCGGCTTACAGAACGCAAGGATTACTGGTTTTCAGCCAGCTGACGATCGTggcggc > 2:529450/1‑151 (MQ=255) aacagcagcaTCACTCATCATCTGAAGTATATTTGGGGGCGGAGGACGGGGGCGGATAACTTTCGGAATAGCCGGATCAGGATTTCCTCCTGAACCGGCTTACAGAACGCAAGGATTACTGGTTTTCAGCCAGCTGACGATCGTGgcggcg < 7:561834/147‑1 (MQ=255) caggCAGGATCACTCATCATCTTCAGTATATTTGGGGGCGGCGGCCGGGGGCGGATAACTTTCGGAATAGCCGGATCAGGATTTCCTCCTGAACCGGCTTACAGAACGCAAGGATTACTGGTTTTCAGCCAGCTGACGATCGTggcggc < 2:594372/146‑1 (MQ=255) atccacgagcccccatcatCAGACGCATCTTGGGGCGCGGCGGCCGGGGGCGGATAACTTTCGGAATAGCCGGATCAGGATTTCCTCCTGAACCGGCTTACAGAACGCAAGGATTACTGGTTTTCAGCCAGCTGACGATCGTGGCGGCGtt < 7:1815206/138‑1 (MQ=255) gccAGGATCACTCATCATCTGAAGGATATTTGGGGGAGGAGGCCGGGGGCGGATAACTTTCGGAATAGCCGGATCAGGATTTCCTCCTGAACCGGCTTACAGAACGCAAGGATTACTGGTTTTCAGCCAGCTGACGATCGTGGCGGCGttt < 3:1425044/149‑1 (MQ=255) gccAGCATCACTCAGCCGCTGAAGGATATTTGGGGGAGCCGGCCGGGGGCGGATAACTTTCGGAATAGCCGGATCAGGATTTCCTCCTGAACCGGCTTACAGAACGCAAGGATTACTGGTTTTCAGCCAGCTGACGATCGTGGCGGCGttt < 3:335483/149‑1 (MQ=255) ggaGGACCACTCATCATCTGAACGATTTTTGGGGGCGCTGCCCGGGGGCGGATAACTTTCGGAATAGCCGGATCAGGATTTCCTCCTGAACCGGCTTACAGAACTCAAGGATTACTGGTTTTCAGCCAGCTGACGATCGTGGCGGCGTTTa < 8:855334/149‑1 (MQ=255) gCAGGATCACTCATCATCTGAAGGATATTTGGGGGAGGAGGACGGGGGCGGATAACTTTCGGAATAGCCGGATCAGGATTTCCTCCTGAACCGGCTTACAGAACGCAAGGATTACTGGTTTTCTGCCAGCTGACGATCGTGGCGGCGttt > 3:172469/1‑150 (MQ=255) cggATCACTCATCATCTCAAGGATTTTTGGGGGCCGCGGCCGGGGGCGGATAACTTTCGGAATAGCCGGATCAGGATTTCCTCCTGAACCGGCTTACAGAACGCAAGGATTACTGGTTTTCAGCCAGCTGACGATCGTGGCGGCGTTTaaa < 4:504155/150‑1 (MQ=255) cccaTCACTCATAATCTGACTGATATTTGGGGGAGCCGCCCGGGGGCGGATAACTTTCGGAATAGCCGGATCAGGATTTCCTCCTGAACCGGCTTACAGAACGCAAGGATTACTGGTTTTCAGCCAGCTGACGATCGTGGCGGCGTTTaaa < 5:788755/148‑1 (MQ=255) ggATCACTCATCATCTGTAGGATCGTTGCGGGCGGCGGCCGCGGGCGGATAACTTTCGGAATAGCCGGATCAGGATTTCCTCCTGAACCGGCTTACAGAACGCAAGGATTACTGGTTTTCAGCCAGCTGACGATCGTGGCGGCGTTTAAAc < 6:1539261/151‑1 (MQ=255) cgATCACTCATCATCTGAAGGATATTTGGGGGCCGCGGCCGGCCGCGGATAACTTTCGGAATAGCCGGATCAGGATTTCCTCCTGAACCGGCTTACAGAACGCAAGGATTACTGGTTTTCAGCCAGCTGACGATCGTGGCGGCGTTTAAAc < 5:884830/150‑1 (MQ=255) tCACTCATCATCTGAAGGATATTTGGGGGAGGAGGACGGGTTCGGATAACTTTCGGAATAGCCGGATCAGGATTTCCTCATGAACCGGCTTACAGAACGAAAGGATTACTGGTTTTCAGCCAGCTGACGATCGTGTAGGCGTTTAAACATc > 6:80378/1‑151 (MQ=255) aCTCATCATCTGAAGGATATTTGGGGGAGGAGGACGGGGGCGGATAACTTTCGGAATAGCCGGATCAGGATTTCCTCCTGAACCGGCTTACAGAACGCAAGGATTACTGGTTTTCAGCCAGCTGACGATCGTGGCGGCGTTTAAACATcc > 7:1605160/1‑150 (MQ=255) aCTCATCATCTGAAGGATATTTGGGGGAGGAGGACGGGGGCGGATAACTTTCGGAATAGCCGGATCAGGATTTCCTCCTGAACCGGCTTACAGAACGCAAGGATTACTGGTTTTCAGCCAGCTGACGATCGTGGCGGCGTTTAAACATcc > 7:123119/1‑150 (MQ=255) tcatcaTCTGAAGGATATTTGGGGGAGGAGGACGGGGGCGGATAACTTTCGGAATAGCCGGATCAGGATTTCCTCCTGAACCGGCTTACAGAACGCAAGGATTACTGGTTTTCAGCCAGCTGACGATCGTGGCGGCGTTTAAACATCCAGc > 4:1075906/1‑151 (MQ=255) aaatcataTGAAGGATATTTGGGGCAGCACCCCGGCCGCGGATAACTTTCGGAATAGCCGGATCAGGATTTCCTCCTGAACCGGCTTACAGAACGCAAGGATTACTGGTTTTCAGCCAGCTGACGATCGTGGCGGCGTTTAAACATCCAGc < 3:555559/149‑1 (MQ=255) catcatCTGCAGGATATTTGGGGGCGGCGGACGGGGGCGGATAACTTTCGGAATAGCCGGATCAGGATTTCCTCCTGAACCGGCTTACAGAACGCAAGGATTACTGGTTTTCAGCCAGCTGACGATCGTGGCGGCGTTTAAACATCCAg < 8:1410833/149‑1 (MQ=255) atcatcTGAAGGATATTTGGGGGAGGAGGACGGGGGCGGATAACTTTCGGAATAGCCGGATCAGGATTTCCTCCTGAACCGGCTTACAGAACGCAAGGATTACTGGTTTTCAGCCAGCTGACGATCGTGGCGGCGTTTAAACATCCAGcc > 3:673747/1‑150 (MQ=255) catcAGAAGGATATTGGGGGGCGGCCGCCGGGGGCGGATAACTTTCGGAATAGCCGGATCAGGATTTCCTCCTGAACCGGCTTACAGAACGCAAGGATTACTGGTTTTCAGCCAGCTGACGATCGTGGCGGCGTTTAAACATCCAGCCAAt < 1:121342/151‑1 (MQ=255) atcTGAAGGATATTTGGGGGAGGAGGACGGGGGCGGATAACTTTCGGAATAGCCGGATCAGGATTTCCTCCTGAACCGGCTTACAGAACGCAAGGATTACTGGTTTTCAGCCAGCTGACGATCGTGGCGGCGTTTAAACATCCAGCCAATc > 2:295094/1‑151 (MQ=255) tcTGAAGGATATTTGGGGGAGGAGGACGGGGGCGGATAACTTTCGGAATAGCCGGATCAGGATTTCCTCCTGAACCGGCTTACAGAACGCAAGGATTACTGGTTTTCAGCCAGCTGACGATCGTGGCGGCGTTTAAACATCCAGCCAATc > 1:49900/1‑150 (MQ=255) cTGAAGGATATTTGGGGGAGGAGGACGGGGGCGGATAACTTTCGGAATAGCCGGATCAGGATTTCCTCCTGAACCGGCTTACAGAACGCAAGGATTACTGGTTTTCAGCCAGCTGACGATCGTGGCGGCGTTTAAACATCCAGCCAATCa > 3:1146776/1‑150 (MQ=255) gatggATATTGGGGGGAGGCGGCCGGGGGCGGATAACTTTCGGAATAGCCGGATCAGGATTTCCTCCTGAACCGGCTTACAGAACGCAAGGATTACTGGTTTTCAGCCAGCTGACGATCGTGGCGGCGTTTAAACATCCAGCCAATCAACa < 6:1414258/148‑1 (MQ=255) gacggATTTTTGGGGGCGGCGGACGGGGGCGGATAACTTTCGGAATAGCCGGATCAGGATTTCCTCCTGAACCGGCTTACAGAACGCAAGGATTACTGGTTTTCAGCCAGCTGACGATCGTGGCGGCGTTTAAACATCCAGCCAATCa < 4:1679033/145‑1 (MQ=255) gAAGGATATTTGGGGGAGGAGGACGGGGGCGGATAACTTTCGGAATAGCCGGATCAGGATTTCCTCCTGAACCGGCTTACAGAACGCAAGGATTACTGGTTTTCAGCCAGCTGACGATCGTGGCGGCGTTTAAACATCCAGCCAATCAAc > 8:1864554/1‑150 (MQ=255) ggATATTTGGGGGAGGAGGCCGGGGGCGGATAACTTTCGGAATAGCCGGATCAGGATTTCCTCCTGAACCGGCTTACAGAACGCAAGGATTACTGGTTTTCAGCCAGCTGACGATCGTGGCGGCGTTTAAACATCCAGCCAATCAACAGca < 2:174442/151‑1 (MQ=255) gATATTTGGGGGAGGCGGCCGGGGGCGGATAACTTTCGGAATAGCCGGATCAGGATTTCCTCCTGAACCGGCTTACAGAACGCAAGGATTACTGGTTTTCAGCCAGCTGACGATCGTGGCGGCGTTTAAACATCCAGCCAATCAACAGcac < 5:1728630/151‑1 (MQ=255) gATATTTGGGGGAGGAGGACGGGGGCGGATAACTTTCGGAATAGCCGGATCAGGATTTCCTCCTGAACCGGCTTACAGAACGCAAGGATTACTGGTTTTCAGCCAGCTGACGATCGTGGCGGCGTTTAAACATCCAGCCAATCAACAGcac > 4:910064/1‑151 (MQ=255) tttGGGGGAGGAGGACGGGGGCGGATAACTTTCGGAATAGCCGGATCAGGATTTCCTCCTGAACCGGCTTACAGAACGCAAGGATTACTGGTTTTCAGCCAGCTGACGATCGTGGCGGCGTTTAAACATCCAGCCAATCAACAGCacaac > 4:381295/1‑150 (MQ=255) ttGGGGGAGGAGGACGGGGGCGGATAACTTTCGGAATAGCCGGATCAGGATTTCCTCCTGAACCGGCTTACAGAACGCAAGTATTACTGGTTTTCAGCCAGCTGAGGATAGTGGCGGCGTTTAACCTTCCAGACAATCAACAGAacaaca > 4:703335/1‑150 (MQ=255) ttGGGGGAGGAGGACGGGGGCGGATAACTTTCGGAATAGCCGGATCAGGATTTCCTCCTGAACCGGCTTACAGAACGCAAGGATTACTGGTTTTCAGCCAGCTGAGGATCGTGGCGGCGTTTAAACATCCAGCGAATCAACAGCacaaca > 2:939963/1‑150 (MQ=255) ggaggcCGGGGGCGGATAACTTTCGGAATAGCCGGATCAGGATTTCCTCCTGAACCGGCTTACAGAACGCAAGGATTACTGGTTTTCAGCCAGCTGACGATCGTGGCGGCGTTTAAACATCCAGCCAATCAACAGCACAACAATCCAcgcg < 1:173244/151‑1 (MQ=255) ggaggaCGGGGGCGGATAACTTTCGGAATAGCCGGATCAGGATTTCCTCCTGAACCGGCTTACAGAACGCAAGGATTACTGGTTTTCAGCCAGCTGACGATCGTGGCGGCGTTTAAACATCCAGCCAATCAACAGCACAACAATCCAcgcg < 2:116511/151‑1 (MQ=255) gaggcCGGGGGCGGATAACTTTCAGAATAGCCGGATCAGGATTTCCTCCTGAACCGGCTTACAGAACGCAAGGATTACTGGTTTTCAGCCAGCTGACGATCGTGGCGGCGTTTAAACATCCAGCCAATCAACAGCACAACAATCCACGCGa < 6:969321/151‑1 (MQ=255) ggaCGGGGGCGGATAACTTTCGGAATAGACGGATCAGGATTTCCTCCTGAACCGGCTTACAGAACGCAAGGATTACTGGTTTTCAGCCAGCTGACGATCGTGGCGGCGTTTAAACATCCAGCCAATCAACAGCACAACAATCCACGCGaa > 3:147469/1‑150 (MQ=255) gaCGGGGGCGGATAACTTTCGGAATAGCCGGATCAGGATTTCCTCCTGAACCGGCTTACAGAACGCAAGGATTACTGGTTTTCAGCCAGCTGACGATCGTGGCGGCGTTTAAACATCCAGCCAATCCACAGCACAACAATCCACGCGAAAc > 7:1516602/1‑151 (MQ=255) gaCGGGGGCGGATAACTTTCGGAATAGCCGGATCAGGATTTCCTCCTGAACCGGCTTACAGAACGCAAGGATTACTGGTTTTCAGCCAGCTGACGATCGTGGCGGCGTTTAAACATCCAGCCAATCAACAGCACAACAATCCACGCGAAAc > 8:296440/1‑151 (MQ=255) aCGGGGGCGGATAACTTTCGGAATAGCCGGATCAGGATTTCCTCCTGAACCGGCTTACAGAACGCAAGGATTACTGGTTTTCAGCCAGCTGACGATCGTGGCGGCGTTTAAACATCCAGCCAATCAACAGCACAACAATCCACGCGAAAcc > 3:1318851/1‑151 (MQ=255) aCGGGGGCGGATAACTTTCGGAATAGCCGGATCAGGATTTCCTCCTGAACCGGCTTACAGAACGCAAGGATTACTGGTTTTCAGCCAGCTGACGATCGTGGCGGCGTTTAAACATCCAGCCAATCAAAAGCACAACAATCCACGAGAAAcc > 3:1270072/1‑151 (MQ=255) | AGCAGTTGATCTTTGCTTTGTTTAACAAATGGGGGCACCGGCAGGTGCCATGCATTTAACATCATAATTCCCCTGTGATGAAAATCTGATCACCTTGCCATAGCCTAATGCAGGATCACTCATCATCTGAAGGATATTTGGGGGAGGAGGACGGGGGCGGATAACTTTCGGAATAGCCGGATCAGGATTTCCTCCTGAACCGGCTTACAGAACGCAAGGATTACTGGTTTTCAGCCAGCTGACGATCGTGGCGGCGTTTAAACATCCAGCCAATCAACAGCACAACAATCCACGCGAAACC > DH1/3448376‑3448676 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |