Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | DH1 | 3,906,837 | 0 | C | G | 25.4% | 228.8 / 25.1 | 129 | intergenic (+8/‑27) | ECDH1_RS19315/ECDH1_RS19320 | tRNA‑Leu/tRNA‑Leu |
Reads supporting (aligned to +/- strand): ref base C (66/25); new base G (30/1); total (103/26) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 4.18e-03 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 132 total aligned reads displayed.
CCCCCCCCTCGCACCAAAAACCACGTTGATATTGCTCGCACTGGGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTTCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCAAACGAGGCGATATCAAAAAAAGTAAGATGACTGTGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAGT‑CCCCCCCCTCGCACCAATTATCTTTACTTCCTTTCTTGTTTCTTCCTTGATTT > DH1/3906699‑3906987 | ccacccccTCGCTCCAACAAAGACTTTGATATTTCTCTCTCTCGGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTTCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCAAACGAGGCGATATCaaaaaa < 8:1711426/148‑1 (MQ=18) cccccTCGCACCAAAAACCACGTTGATATTGCTCGCACTGGGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTTCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCAAAAGAGGCGATATCAAAAAAAGt > 2:1399605/1‑151 (MQ=255) cccccTCGCACCAAAAACCACGTTGATATTGCTAGCACTGGGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTTCTTACGGACGTGGGGGTTGAAGTCCCCCCCCTACAACCAAAAAAGGGGatgtactatatggt > 8:1178880/1‑139 (MQ=18) ccccTCGCACCAAAAACCACGTTGATATTGCTCGCACTGGGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTTCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCAAAAAAGTATAGATCAAAAAAAGtt > 1:149749/1‑150 (MQ=18) cccTCGCACCAAAAACCACGTTGATATTGCTCGCACTGGGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTTCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCAATCgcggcgctggccacgactgta > 5:1296290/1‑135 (MQ=18) ccTCGCACCAAAAACCACGTTGATATTGCTCGCACTGGGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTTCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCAAAAGAGGCTAGATCAAAAAAAGttat > 7:346347/1‑148 (MQ=255) ccTCGCACCAAAAACCACGTTGATATTGCTCGCACTGGGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTACTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGAACCAAAAGAGTGTAAATCAATTAAAGTat > 4:1524482/1‑149 (MQ=18) gCACCAAAACCCACGTTCATATTCCTCGCACCTCTAGAAGTAGCCGCATTTCTTAGTATCTCTAGCTTCAGGTGTTAGTGTTCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCAAACGAGGCGATATCAAAAAAAGTAAGATGa < 6:228246/151‑1 (MQ=18) cACCAAAAACCACGTTGATATTGCTCGCACTGGGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTTCTTACGGACGTGGGGGTTCAAGTACCCCCCCTCGCACCAAAAAACGCGCAATAAAAAAAAGTAAGAtta > 8:37544/1‑148 (MQ=18) ggtatcaacACGTTTTTATTGCTCAGTGTTGGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTTCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCAAACGAGGCGATATCAAAAAAAGTAAGATGACtg < 7:1696195/143‑1 (MQ=18) aacaaagaCGTTTTTATTGCTCGCACTCGGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTTCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCAAACGAGGCGATATCAAAAAAAGTAAGATGACtgtg < 7:1819185/144‑1 (MQ=255) aaaCCACGTTGATATTGGTGCCACTGGGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTGCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCAAACGAGGCGATATCAAAAAAAGTAAGATGACTGTGCg < 7:389542/151‑1 (MQ=255) ccACGTTGATATTGCTCGCACTGGGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTTCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCAAATAACTATAAATCAAAAAAAGTTAGATgcatgatattac > 2:1349964/1‑140 (MQ=17) cGTTGATATTGCTCGCACTGGGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTTCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCAAACGAGGCGATATCAAAAAAAGTAAGATGACTGTGCGAAGGTg < 1:1401185/151‑1 (MQ=255) gTTGATATTGCTCGCACTGGGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTTCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCAAACGAGGCTATATCAAAAAAAGTAAGATGAGTGTGGGAAGGTgg > 5:1527787/1‑151 (MQ=255) tttaagttctctCACTTGGCTAAGGGGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTTCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCAAACGAGGCGATATCAAAAAAAGTAAGATGACTGTGCGAAGGTGGc < 5:921435/142‑1 (MQ=21) ttagttctccgaCTCGGCGAAGGTGGCGGAATTGGTAGACGATCTAGCTTCATGTGTTAGTGTTCTTACGGACGTGGGGGTGCAAGTCCCCCCCCTCGCACCAAACGAGCCGATATCAAAAAAAGTAATCTGACTGTGCGAAGGTGGCgg < 8:454744/139‑1 (MQ=18) atatTGCTCGCACTGGGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTTCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCAAAAAAGGATATATCAAAAAATGTATGATGAAtgatttttgatgccgg > 6:1714060/1‑136 (MQ=17) tatatctcgccgtcggCGAAGGGGGAGGAATTGGTAGACGCGCTAGCTTCAGGTTTTAGTGTTCTTACGGACGTGGGGGTTCAAGGCCCCCCCCTCGCACCAAACGAGGCGATATCAAAAAAAGTAAGATGACTGTGCGAAGGTGGCGGa < 7:732645/136‑1 (MQ=21) aatttttgtttgtttgCGAAGGTTGCGGAATTGGTAGACGCGCTAGCTTGAGGTGTTAGTGTTCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCAAACGAGTCGATATCAAAAAAAGTAAGATGACTGTGCGAAGGTGGCGGa < 2:1845405/135‑1 (MQ=18) aatagctccccgtttgCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTTCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCAAACGAGGCGATATCAAAAAAAGTAAGATGACTGTGCGAAGGTGGCGGaa < 7:209495/136‑1 (MQ=255) ttttttttgtttgCGAAGGTGTCGGAATTGGTATACGCGCTAGCTTCTGGTTTTATTGTTCTTTCGGATGTGTTGTTTAAAGTCACTCGAATCGCACCAATCGTTTCGATATCATTAAAAGTATTATTTCTGTGCGAAGGTGGCGGAAtt < 8:642951/138‑1 (MQ=255) actctgtgtatgCGAAGGTTGCGGAATTGGTAGAGGTGCTAGCTTGAGGTGTTAGTTTAATTACTGACGTTGCGGTTCAAGTCCCTCCACTCGCACCAAATGATTCGATATCATTTAAAGTAATTTGAGTGTGCGAAGGTGGCGGAATTg < 4:900018/139‑1 (MQ=255) tCGCACTGGGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTTCTTACGGACGTGGGGGTTCAAGTCCCCCCCCGCGCCCCAAAAGAGGCGATATCCAAAAAACTGAGATGCCGGGGCGAACGGGGCgggcctgggg > 7:185941/1‑143 (MQ=17) cccACTGGGCGAAGGTGGCGGAATTGGTAGACGCGCAAGCTTCAGGTGTTAGTGGTCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCAAACGAGGCGATATCAAAAAAAGTAAGATGACTGTGCGAAGGTGGCGGAATTGGTa < 7:54755/148‑1 (MQ=255) cccACTCGGGGAAGGGGGCGGTCTTGGTCGACGCGCTTGCTTCAGGTGTTCGGGTCCGTACGGACGTCTCGGTGCAAGCCCCACCACTCGCACGACCCGCTACGATATCTTAATAAGTAATCTGACTCTGCGAAGGTGGCGGAATTGGTAg < 1:513972/149‑1 (MQ=9) cGCAGTGCGCGTATGTGTAGGAAGCGGTAGACGGCCTAGCGTCAGGGGGAAGTGGTCTTCCGGTCAGGGGGGTGCTCGTCCCCGCCCTCGCACTCCAAGCTACGATATCTTTAAAAGTAATCTGTCTTTGCGAAGGTGGCGGAATTGGTAg < 7:1537493/151‑1 (MQ=255) cGCACTGGGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTTCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCAAACGACGGTAGATCAATTATAGTTAGATGCCTGTGTGTTGCTGCCGGAATTGATa > 1:328468/1‑150 (MQ=14) gCACTGGGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTTCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCAAAAGATCCGATTAGAAAAACAGTAAGCTGAATTGGCGATCGTGCCGGAAGTTGTAgc > 7:653794/1‑150 (MQ=14) tctatgCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTTCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCAAACGAGGCGATATCAAAAAAAGTAAGATGACtg < 5:536415/120‑1 (MQ=255) cTGGGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTTCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCAAAAAACGGGAAATCAATAAAAGTAAGATACCTGATATATGCTGGCGGAATTGATataagg > 2:919448/1‑146 (MQ=14) ggCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTTCTTACGGACGTGGGGGTTCAAGTCCCCCCCCGCGCCCCAAAATTCGGGCTTTCAAAAAAAGTTTGTTGCCTGTGGTTTGGTGGCGGTAttcgattcatgg > 1:577476/1‑139 (MQ=2) gCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTTCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCAAAAGAGGGGATATCAATAAAAGTTAGATGCCTGTGCGATGGTGGCGGAATTGGTAGActgg > 3:208916/1‑145 (MQ=18) gAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTTCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCAAAAGAGTGTATATCAAAAAATGTTAGTTGACTGTTGTTAGGTGGCTGATTTgatttaatagatagc > 7:325441/1‑137 (MQ=14) gtgtctgAATTGGTAGACGAGGTTGTTTCTTGTTTATTTGTTCTTATTGACGTTTTGGTTAAATTCCCTAGCCTCGCACTAATCGTTTGGAAATCTTAAAAAGTAAGATGTCTTTGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCa < 4:635286/145‑1 (MQ=9) gAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTTCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCACACGCGGGGATCTCAAAAAAAGTATGATGACTGTGCGAAGGTGGCGGAATGGGTAGCCGCGCTAGCTTCATGAGtt > 3:589311/1‑151 (MQ=21) aaTTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTTCTTACGGACGTGGGGGTTCAAGT‑CCCCCCCACGCCCCAAAAGAGGCGATATAAAAAAAATTAAGATGACTTTCGTAAAGTGCCGGAATTCCTAAACGCTATAGATTCACGTGTTa > 5:486358/1‑150 (MQ=12) aTTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTTCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCCCCAAACAACGGGATATAAAAAAAAGTTTGATGAATGTTGGTTGGTGGCGGAATTGGAATACGCGGTAGCTTCATGTGTTat > 3:1881960/1‑150 (MQ=17) ggTAGACGCGCTAGCTTCAGGTGTTAGTGTTCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCAAAAGAGGGGATATCAAAAAAAGTTAGATGACTGTGGGTAGGTGGCGGAATTGGTAGACGAGGGAGCTTCAGGTGTTAgtgt > 5:549353/1‑151 (MQ=21) gtcgcgCTAGCTTCTGGTTTTAGTCTTCTTACGGAAGTGGGGGTTCAAGTGCCCCCCCTCGCACGAAACGAGTCTATATCAAAAAAATTAAGATGACTGTGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCtt < 7:61526/149‑1 (MQ=25) cgcgcgCTTCCGCTGTTAGTGTGCGTCCGGACGGGGGGGGGCCCGTCCCCCCCCGCGCACCAAACGATTCGATATCAAAAAAAGTAATAGGACTGTGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACgg < 1:475900/146‑1 (MQ=18) gcTAGCTTCAGGTGTTAGTGTTCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCAAAAGAGGGTATATCAATAAAAGTTAGATGAATGTTAGTTGGTCGCGGAATTAGTATAAGAAATATCATCAGGTGTAAgtgaaattaagcc > 6:892562/1‑141 (MQ=9) tAGCTTCAGGTGTTAGTGTTCTTACGGACGTGGGGGTTCAAGTCCCCCCCCGCGCACCAAAGGAGGGGATATCAAATAAAGTTAGTTGCCTGTTGGTTGGTGGCGGGATTTCTATAAGTGATAGCATCATGTGTTACTGTCATTAAGGCCg > 5:686743/1‑151 (MQ=12) gCTTCAGGTGTTAGTGTTCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCAAAATAGGGGATATCAAAAAAAGTAAGATGAGTGTGGTAAGGTGGCGGAATTCGAATACGTGCTATCATCATGAGTTAGTGTAAATAAGGACGTg > 1:816923/1‑151 (MQ=18) ttCAGGTGTTAGTGTTCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCAAAGTAGGGGAGATCAAATAAAGTTAGATGCCTGAGGGAAGGTGGCGGAATTGGTAGCATAGGTATCATCAGGTTTTAGGGTAATTAAGGCCGTggg > 8:273223/1‑151 (MQ=12) ttCAGGTGTTAGTGTTCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCAAAAGAGGGTAGATCAAAAAAAGTATGATGAATGTGGTTTGGTGGCGGAATTGTTTTAATGGGTATCTTCATGTTTTAGTGAAATTACGGAAGTggg > 1:1274390/1‑151 (MQ=12) ttCAGGTGTTAGTGTTCTTACGGACGTGGGGGTTCAAGTCCCCCCCCACGCACCAAAACACGCGAAATAAAAAAAAATAAAAATACAGATAGAAGATGGCGGAATTGGTTTAAAGAATATCAACAGGTTTTAGTGTAATTACGGACGTggg > 5:748769/1‑151 (MQ=9) cAGGTGTTAGTGTTCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCCCCAAAAGAGGGGATATCAAAAAAAGTTTGATGCCTGTGGGTTGGTGGCGGAATTGGTTGACGGGGTATCTTCAGGTTTTACTGTCCTTAAGGCCGgggggg > 7:807740/1‑151 (MQ=21) cAGGTGTTAGTGTTCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCAAACGAGGGGATATGAAATATAGTAAGTTGAATGGGCGCAGGTGCCGGCAGTCGTACACGCGCAAGCTTCAGGTGTTAGTGTCCTTACGGACGTggggt > 7:131234/1‑150 (MQ=21) aGGTGTTAGTGTTCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCAAAAGAGGCGATATCAAAAAAAGTTAGATGACTGTGGGTACGTGGCGGAATTCGTATACGCGCAACCCTCAGGGGTGACTGTACTAACGCCCGTggggct > 5:650458/1‑149 (MQ=18) gtgtTAGTGTTCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCAAACGAGGGGATATCAAAAAAAGTAAGATGACTGTGCGAAGGTGGCGGAATTGGTATCCGCGGGAGCTTCAGGTGTTAGTGTCCTTACGGCCGTGGGGGttg > 5:576607/1‑150 (MQ=37) ttAGTGTTCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCAACAAACGAAGAGAGTACAAAAAAAAAAAGATGAATTTGCGAAGGTTGATGAAATGGTAGACCCGATAAATTAAAAAGATATTGTGCTTGCGGACGTggggggtgggg > 2:1804493/1‑145 (MQ=12) tAGTGTTCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCAAAAGAGGGGAGATCAAAAAAAGTTAGATGAGTGTGGGTAGGTGGCGGAATTTGTATACGGGGGATCGTCAGGGTTTAGTGTACATAAGGCCGGGGGCGTTcgcct > 5:357245/1‑147 (MQ=16) actgtTCTTACGTCCGTGGGGGTTCAACTCCACCCCCTCGCACCAAACGACCCCATATCAAAAAAAGTCCGATGACTGTGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAGT‑c < 3:1602578/149‑1 (MQ=21) gtgtTCTTACGGACGTGGGGGTTCAAGTCCCCCCCCGCGCACCAAAAGAGGGTAGTTCAAAAAAAGTTAGATGCCTGTTGGTTGGTGGCGGATTTGGGTTAAGGGGGATCTTCAGGGGTTAGTGTCCATAAGGCcgggcggggggtaggcc > 5:491970/1‑142 (MQ=9) gtTCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCAAACGAGGGTAAATCAAATAATGTTAGATGACTGTGATATGGTGGCGGATTTTGAAGACGAGGTATCTTAATGTTTTACTCTCCTAACCGCAGTCGGGGTTCAAGc‑ccgc > 1:1323103/1‑149 (MQ=12) gtTCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCAAACCAGGTTAAATCCTAAAGAGTATGATGCATGTTTTATGGTGGCGGAATTCGATGAAGTGATATCTGCAGGTTGGAATGTCCATAAGGCCGTGGGGCTTCAAggcaac > 5:166644/1‑146 (MQ=9) gACGTGGGGGTTCAAGTCCCCCCCCTCGCACCAATGGACGCGATATCAAAAAATGTAAGATGAGTGTGGTAAGGTGGCGGAATTGGTATACGGGATAGCTTCAGGTGTTAGTGTACTATGGGACGGGGGGGTTGAAGtaacaaccaaagcc > 3:1444866/1‑138 (MQ=19) gACGTGGGGGTTCAAGTCCCCCCCCTCGCACCAAACGAGGCGATATCAAAAAAAGTAAGATGCCTGTGCGAAGGTGGCGGAATTGGTAGCCGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAGG‑CCCCACCCTCGcc > 1:1636514/1‑150 (MQ=255) gACGTGGGGGTTCAAGT‑CCCCCCCTCGCACCAAACGAGGCGATATCAAAAAAAGTAAGATGCCTGTGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTGAAGT‑CCCCCCCCACTCAc > 7:1259555/1‑151 (MQ=21) gTGGGGGTTCAAGTCCCCCCCCTCGCACCAAAGGAGGGGATATCATATAATGTAAGTTGACTGTGAGTAGGTGGCGGAATGGGTAGACGGGCGAGCTTCAGGTTTTAGTGTACTAACGCACGTGGGGCTTGTAGC‑cccctggctggccgc > 3:125763/1‑139 (MQ=16) ttCAAGTCCCCCCCCTCGCACCAAAGGAGGGGAGATCAAAAAATGTTTGATGCGTGTGCGTAGGTGGCGGAATTGGTAGACGGGCGAGCTTCAGGTGGTAGTGTCGTTGCGGCCGTGGGGCTTGAAGG‑CCCACCCCTCGCAGCAAGTAtgt > 8:1590051/1‑149 (MQ=16) tCAAGTCCCCCCCCTCGCACCAAACGAGGCGATATCAAAAAAAGTAAGATGACTGTGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTGAAGT‑GCCGCCCCAGGCCCCAATTATAtt > 7:1403677/1‑151 (MQ=25) tCCCCCCCCTCGCACCAAACGAGGCGATATCAAAAAAAGTAAGATGACTGTGGGAAGGTGGCGGAATTGGTATACGCGCTAGCTTCAGGTGTTAGTGTAGTTACGGACGTGGGGGTTGAAGT‑CACCCCCCAGGCCCCaacttttttttatt > 5:1338362/1‑139 (MQ=21) ccccccccTCGCACCAAAAGAGGCGATTTCAAAAAAAGTAAGATGACTGTGCGATGGTGGCGGAATTCGTAGACGCGCTAGCTTCAGGTGTTAGTCTCGTTACGGACGTGCGGGTTGAAGG‑CCCCGGCCAAGCCCCAAATTTGTTTACtac > 5:1671449/1‑149 (MQ=18) cccccccTCGCACCAAACGAGGCGATATCAAAAAAAGTAAGATGACTGTGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAGT‑CCCCCCCCTCGCACCAATTATCTTTACTTcc > 4:754672/1‑151 (MQ=255) ccccccTCGCACCAAACGAGGCGATATCAAAAAAAGTAAGATGACTGTGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAGT‑CCCCCCCCTCGCACCAATTATGTTTACTTCCt > 8:1325097/1‑151 (MQ=255) cccccTCGCACCAAACGAGGCGATATCAAAAAAAGTAAGATGACTGTGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAGT‑CCCCCCCCTCGCACCAATTATCTTTACTTCCtt > 3:1207357/1‑151 (MQ=255) ccccTCGCACCAAACGAGGCGATATCAAAAAAAGTAAGATGACTGTGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCCAGT‑CCCCCCCCTCGGCCGCATTATCTTTACGTCCttt > 7:984690/1‑151 (MQ=21) ccccTCGCACCAAACGAGGCGATATCAAAAAAAGTAAGATGACTGTGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGGTGAAGT‑CCCCCCCCTCGCACCAATTATCATTACTTCCtat > 1:1797528/1‑149 (MQ=255) cccTCGCACCAAACGAGGCGATATCAAAAAAAGTAAGATGACTGTGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAGT‑CCCCCCCCTCGCCCCAATTATGTTTACTTCCTTTc > 3:722674/1‑151 (MQ=255) cccTCGCACCAAACGAGGCGATATCAAAAAAAGTAAGATGACTGTGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAGT‑CCCCCCCCTCGCACCAATTATCTTTACTTCCgtt > 6:338944/1‑150 (MQ=255) cccTCGCACCAAACGAGGCGATATCAAAAAAAGTAAGATGACTGTGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAGT‑CCCCCCCCTCGCACCAATTATCTTTACTTCCTTTc > 1:7782/1‑151 (MQ=255) ccTCGCACCAAACGAGGCGATATCAAAAAAAGTAAGATGACTGTGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAGT‑CCCCCCCCTCGCCCCAATTATCTTTACTTCCTTTCt > 3:734332/1‑151 (MQ=255) ccTCGCACCAAACGAGGCGATATCAAAAAAAGTAAGATGACTGTGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAGT‑CCCCCCCCTCGCACCAATTATGTTTAGTTCCTTTCt > 6:361680/1‑151 (MQ=255) tCGCACCAAACGAGGCGATATCAAAAAAAGTAAGATGACTGTGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAGT‑CCCCCCCCTCGCCCCAAATAACTTTACTTGCTTTCttt > 7:1195884/1‑150 (MQ=255) tCGCACCAAACGAGGCGATATCAAAAAAAGTAAGATGACTGTGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAGT‑CCCCCCCCTCGCACCAATTATCTTTACTTCCTTTGttt > 1:1629121/1‑150 (MQ=255) cGCACCAAACGAGGCGATATCAAAAAAAGTAAGATGACTGTGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAGT‑CCCCCCCCTCGCCCCAATTATCTTTACTTCCTTTCTTGt > 6:826488/1‑151 (MQ=255) cGCACCAAACGAGGCGATATCAAAAAAAGTAAGATGACTGTGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAGT‑CCCCCCCCTCGCACCAATTATCTTTACTTCCTTTCTTGt > 1:1068197/1‑151 (MQ=255) gCACCAAACGAGGCGATATCAAAAAAAGTAAGATGACTGTGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAGT‑CCCCCCCCTCGCACCAATTATCTTTACTTCCTTTCTTGtt > 1:217684/1‑151 (MQ=255) gCACCAAAAGAGGCGATATCAAAAAAAGTAAGATGACTGTGCGAAGGTGGCGGAATTGGTATACGCGATAGCTTCAGGTGTTAGTGTACTTACTGACGTGGGGGTTAAAGT‑CCCCACAAACGCACCAAATATCGTAAATTACTTTATTGtt > 6:75531/1‑151 (MQ=18) cACCAAACGAGGCGATATCAAAAAAAGTAAGATGACTGTGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAGT‑GCCCCCCCGCGCACCAATTATCTTTACTTGCGTTGTTGttt > 3:599328/1‑151 (MQ=255) cACCAAACGAGGCGATATCAAAAAAAGTAAGATGACTGTGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAGT‑CCCCCCCCTCGCACCAATTATCTTTACTTCCTTTCTTGttt > 5:980661/1‑151 (MQ=255) aCCAAACGAGGCGATATCAAAAAAAGTAAGATGACTGTGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCCAGTGCCCCCCCCGCGCCCCAATTATCTTTACTTGCTTTCATGttt > 5:445792/1‑151 (MQ=21) ccAAACGAGGCGATATCAAAAAAAGTAAGATGACTGTGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAGT‑CCCCCCCCTCGCACCAATTATCTTTAATTCCTTTCTTGTttct > 3:304440/1‑151 (MQ=255) ccAAACGAGGCGATATCAAAAAAAGTAAGATGACTGTGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAACT‑GCCCCCCCTCGCACCAATTATCGTTACTTCCTTTCTTGTttct > 3:488270/1‑151 (MQ=255) aaaCGAGGCGATATCAAAAAAAGTAAGATGACTGTGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGATGTGGGGGTTCAAGT‑CCCCCCCCTCGCACCAATTATCTTTACTTCGTTTCTTGTttcttc > 8:552940/1‑151 (MQ=255) aaCGAGGCGATATCAAAAAAAGTAAGATGACTGTGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAGT‑CCCCCCCCTCGCACCAATTATCTTTACTTCCTTTCTTGTTTGTTcc > 3:248043/1‑151 (MQ=255) aaCGAGGCGATATCAAAAAAAGTAAGATGACTGTGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAGT‑CCCCCCCCTCGCACCAATTATCTTTACTTCCTTTCTTGTTTCTTcc > 3:1431691/1‑151 (MQ=255) aaCGAGGCGATATCAAAAAAAGTAAGATGACTGTGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAGT‑CCCCCCCCTAGCCCCAATTATCTTTAATTCCTTTGTTGTTTCTTcc > 8:195637/1‑151 (MQ=255) aaCGAGGCGATATCAAAAAAAGTAAGATGACTGTGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAGT‑CCCCCCCCGCGCCCCAATTATCTTTACTTCCTTTGTTGTTTGTTcc > 7:1793634/1‑151 (MQ=255) cGAGGCGATATCAAAAAAAGTAAGATGACTGTGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAGT‑CCCCCCCCTCGCCCCAATTATCTTTACTTCCTTTCTTGTTTCTTCCtt > 1:988256/1‑151 (MQ=255) cGAGGCGATATCAAAAAAAGTAAGATGACTGTGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAGT‑CCCCCCCCTCGCACCAATTATCTTTACTTCCTTTCTTGTTTCTTCCtt > 3:699201/1‑151 (MQ=255) gAGGCGATATCAAAAAAAGTAAGATGACTGTGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTGAAGG‑CCCCCCCCTCGCACCAATTTTCTTTACTTCATTTGTTGTTTCGTCGTTg > 4:1437450/1‑151 (MQ=21) gAGGCGATATCAAAAAAAGTAAGATGACTGTGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAGT‑CCCCCCCCTCGCCCCAATTATCTTTACTTCCTTTCTTGTTTCTTCCttt > 2:1316678/1‑150 (MQ=255) gAGGCGATATCAAAAAAAGTAAGATGACTGTGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTAAAGG‑CCCCCCCCTGGGACCAATTATATTTAAGTTCTTTGTTGTTTGTTCCttt > 5:1371145/1‑150 (MQ=18) aGGCGATATCAAAAAAAGTAAGATGACTGTGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTGCAGT‑CCCCCCCCGCGCCCCCAATTTTTTTTCTTGCTTTGTTGTTTGTTCCTTgt > 7:372334/1‑150 (MQ=18) aGGCGATATCAAAAAAAGTAAGATGACTGTGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAGT‑CCCCCCCCTCGCCCCAATTATGTTTACTTCCTTTCTTGTTTcttgcttgt > 2:543396/1‑150 (MQ=255) aGGCGATATCAAAAAAAGTAAGATGACTGTGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAGT‑CCCCCCCCTCGCACCAATTATCTTTACTTACTTTCTTGTTTCTTCCTTg > 4:1516934/1‑150 (MQ=255) cGATATCAAAAAAAGTAAGATGACTGTGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAGT‑CCCCCCCCTCGCACCAATTATCTTTACTTCCTTTCTTGTTTCTTCCTTGAttt > 8:1185559/1‑151 (MQ=255) | CCCCCCCCTCGCACCAAAAACCACGTTGATATTGCTCGCACTGGGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTTCTTACGGACGTGGGGGTTCAAGTCCCCCCCCTCGCACCAAACGAGGCGATATCAAAAAAAGTAAGATGACTGTGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTCCTTACGGACGTGGGGGTTCAAGT‑CCCCCCCCTCGCACCAATTATCTTTACTTCCTTTCTTGTTTCTTCCTTGATTT > DH1/3906699‑3906987 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |