| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | DH1 | 102,618 | 0 | G | C | 23.2% | 889.8 / 56.4 | 328 | intergenic (‑70/+128) | trmL/lldD | tRNA (cytosine(34)‑2'‑O)‑methyltransferase TrmL/alpha‑hydroxy‑acid oxidizing enzyme |
| Reads supporting (aligned to +/- strand): ref base G (44/208); new base C (76/0); total (120/208) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.98e-43 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 342 total aligned reads displayed.
GAAAGCCGGTATTAGCGCAAAGACGGATGATGTTGCCAGTATTTGGCGGAATTTCTGGTTCGTAAAGTACGATGTTTAGCATACTGCCCCCTTAGTGCGGGGGCAGGATAGCAGAAAATTGGTGAGCAGTGCGGCCTTTT‑CCCCTCACCCCGGCCCTC‑TCCCCGGAGGGG‑CGAGGGAGAAAAAAAGAGTGCGGTGTCGTTTCAGAGTGAGGGAGTACATACAGCGCCGAACGGTCCCCTCTCCCTGAGGGAGAGGGTTAGGGTGAGGGGGCGCAAACGACTATGCCGCATTCCCTTTCGCCA > DH1/102467‑102768 | aaaGCCGGTATTACCGCAAAGACGGATGATGTTGCCAGTATTTGGCTGAATTTCTGGTTCGTAAAGTACGATGTTTAGCATACTGCCCCCTTAGTGCGGGGGCAGGATAGCAGAAAATTGGTGAGCAGTGCGGCCTTTT‑CCCCTCACCCCg < 2:73260/151‑1 (MQ=255) ggTATTAGAGCAAAGACGGATGATGTTGCCAGTATTTGGCGGAATTTCTGGTTCGTAATGTACGATGTTTAGCATACTGCCCCCTTAGTGCGGTGGCAGGATAGCAGAAAATTGGTGAGCAGTGCGGCCTTTT‑CCCGTCACCCCGGCCctc < 2:1916003/151‑1 (MQ=255) gTATTAGCCCAAAGACGGATGATGTTGCCAGTATTTGGCGGAATTTCTGGTTCGTAAAGTACGATGTTTAGCATACTGCCCCCTTAGTGCGGGGGCAGGATAGCAGAAAATTGGTGAGCAGTGCGGCCTTTT‑CCCCTCACCCCGGCCctc‑t < 6:1063181/151‑1 (MQ=255) aTTAGCGCAAAGACGGATGATGTTGCCAGTATTTGGCGGAATTTCTGGTTCGTAAAGTACGATGTTTAGCATACTGCCCCCTTAGTGCGGGGGCAGGATAGCAGAAAATTGGTGAGCAGTGCGGCCTTTT‑CCCCTCACCCCGGCCCtc‑tc < 8:1435833/150‑1 (MQ=255) aTTAGCGCAAAGACGGATGATGTTGCCAGTATTTGGCGGAATTTCTGGTTCGTAAAGTACGATGTTTAGCATACTGCCCCCTTAGTGCGGGGGCAGGATAGCAGAAAATTGGTGAGCAGTGCGGCCTTTT‑CCCCTCACCCCGGCCCTC‑Tcc < 7:970397/151‑1 (MQ=255) aGCGCAAAGACGGATGATGTTGCCAGTATTTGGCGTAATTTCTGGTTCGTAAAGTACGATGTTTAGCATACTGCCGCCTTAGTGCGGGGGCAGGATAGCAGAAAATTGGTGAGCAGTGCGGCCTTTT‑CCCCTCACCCCGGCCCTC‑TCCCCg < 6:629287/151‑1 (MQ=255) aGCGCAAAGACGGATGATGTTGCCAGTATTTGGCGGAATTTCTGGTTCGTAAAGTACGATGTTTAGCATACTGCCCCCTTAGTGCGGGGGCAGGATAGCAGAAAATTGGTGAGCAGTGCGGCCTTTT‑CCCCTCACCCCGGCCCTC‑Tcccc < 7:1724796/150‑1 (MQ=255) cAAAGACGGATGATGTTGCCAGTATTTGGCGGAATTTCTGGTTCGTAAAGTACGATGTTTAGCATACTGCCCCCTTAGTGCGGGGGCAGGATAGCAGAAAATTGGTGAGCAGTGCGGCCCTTT‑CCCCTCACCCCGGCCCTC‑TCCCCGGAgg < 8:1627830/151‑1 (MQ=255) cAAAGACGGATGATGTTGCCAGTA‑‑TGGCGGAATTTCTGGTTCGTAAAGTACGATGTTTAGCATACTGCCCCCTTAGTGCGGGGGCAGGATAGCAGAAAATTGGTGAGCAGTGCGGCCTTTT‑CCCCTCACCCCGGCCCTC‑TCCCCGGAgggg < 8:1929136/151‑1 (MQ=255) aaaGACGGATGATGTTGCCAGTATTTGGCGGAATTTCTGGTTCGTAAAGTACGATGTTTAGCATACTGCCCCCTTAGTGCGGGGGCAGGATAGCAGAAAATTGGTGAGCAGTGCGGCCTTGT‑ACCCACAccccccccccc‑ccccccgcccg > 4:9379/1‑145 (MQ=255) aCGGATGATGTTGCCAGTATTTGGCGGAATTTCTGGTTCGTAAAGTACGATGTTTAGCATACTGCCCCCTTAGTGCGGGGGCAGGATAGCAGAAAATTGGTGAGCAGTGCGGCCTTTT‑GCCCACCCCCCCGCCCCC‑CCCCCCCAggggggc > 3:973954/1‑148 (MQ=255) cGGATGATGTTGCCAGTATTTGGCGGAATTTCTGGTTCGTAAAGTACGATGTTTAGCATACTGCCCCCTTAGTGCGGGGGCAGGATAGCAGAAAATTGGTGAGCAGTGCGGCCTTTT‑CCCCTCACCCCGGCCCTC‑TCCCCGGAGGGG‑CGAg < 7:312585/151‑1 (MQ=255) ggATGTTGTTGCCTGTATTTGGCGGTATTTCTGTTTCGTAAAGTACGATTTTTAGCATTCTGCCGCCTTAGTGCGGGGGCAGGATATCAGAAAATTGGTGAGCTGTGCTGCCTTTT‑CCCCTCACCCCGGCCCTC‑TCCCCGGAGGGG‑CGAgg < 2:1182215/151‑1 (MQ=255) gatgatGTTGCCAGTATTTGGCGGAATTTCTGGTTCGTAAAGTACGATGTTTAGCATACTGCCCCCTTAGTGCGGGGGCAGGATAGCAGAAAATTGGTGAGCAGTGCGGCCTTTT‑GCCCGCCCCCCCGCCCCC‑ACCCCCGCGGGG‑GGCggg > 5:247942/1‑151 (MQ=255) gatgatGTTGCCAGTATTTGGCGGAATTTCTGGTTCGTAAAGTACGATGTTTAGCATACTGCCCCCTTAGTGCGGGGGCAGGATAGCAGAAAATTGGTGAGCAGTGCGGCCTTTT‑CCCCTCACCCCGGCCCTC‑TCCCCGGAGGGG‑CGAggg < 1:1304800/151‑1 (MQ=255) gatgatGTTGCCAGTATTTGGCGGAATTTCTGGTTCGTAAAGTACGATGTTTAGCATACTGCCCCCTTAGTGCGGGGGCAGGATAGCAGAAAATTGGTGAGCAGTGCGGCCTTTT‑CCCCTCACCCCGGCCCTC‑TCCCCGGAGGGG‑CGAggg < 3:1502334/151‑1 (MQ=255) atgatgTTGCCAGTATTTGGCGGAATTTCTGGTTCGTAAAGTACGATGTTTAGCATACTGCCCCCTTAGTGCGGGGGCAGGATAGCAGAAAATTGGTGAGCAGTGCGGCCTTTT‑CCCCTCACCCCGGCCCTC‑TCCCCGGAGGGG‑CGAGGga < 5:491562/151‑1 (MQ=255) tgatgTTGCCAGTATTTGGCGGAATTTCTGGTTCGTAAAGTACGATGTTTAGCATACTGCCCCCTTAGTGCGGGGGCAGGATAGCAGAAAATTGGTGAGCAGTGCGGCCTTGT‑GCCCGCACCCCCCCCCCC‑TCCCCCGCGGGG‑GGCggggg > 3:1215781/1‑149 (MQ=255) gatgTTGCCAGTATTTGGCGGAATTTCTGGTTCGTAAAGTACGATGTTTAGCATACTGCCCCCTTAGTGCGGGGGCAGGATAGCAGAAAATTGGTGAGCAGTGCGGCCTTTT‑GCCCGCCCCCCCGCCCGC‑ACCCCCGCGGGG‑GGCgggggc > 5:1943603/1‑148 (MQ=255) gatgTTGCCAGTATTTGGCGGAATTTCTGGTTCGTAAAGTACGATGTTTAGCATACTGCCCCCTTAGTGCGGGGGCAGGATAGCAGAAAATTGGTGAGCAGTGCGGCCTTTT‑CCCCTCACCCCGGCCCTC‑TCCCCGGAGGGG‑CGAGGgaga < 5:623033/151‑1 (MQ=255) gatgTTGCCAGTATTTGGCGGAATTTCTGGTTCGTAAAGTACGATGTTTAGCATACTGCCCCCTTAGTGCGGGGGCAGGATAGCAGAAAATTGGTGAGCAGTGCGGCCTTTT‑CCCCTCACCCCGGCCCTC‑TCCCCGGAGGGG‑CGAGGgag < 2:331481/150‑1 (MQ=255) atgTTGCCAGTATTTGGCGGAATTTCTGGTTCGTAAAGTACGATGTTTAGCATACTGCCCCCTTAGTGCGGGGGCAGGATAGCAGAAAATTGGTGAGCAGTGCGGCCTTGT‑GCCCGCCCCCCCCCCCGC‑CCCCCCGCgggg‑ggggggggc > 1:1796870/1‑147 (MQ=255) atgTTGCCAGTATTTGGCGGAATTTCTGGTTCGTAAAGTACGATGTTTAGCATACTGCCCCCTTAGTGCGGGGGCAGGATAGCAGAAAATTGGTGAGCAGTGCGGCCTTGT‑CCCCGCCCCCCGGCCCGC‑GCCCCCGGGGGG‑CGggggggg > 6:974484/1‑147 (MQ=255) gTTGCCAGTATTTGGCGGAATTTCTGGTTCGTAAAGTACGATGTTTAGCATACTGCCCCCTTAGTGCGGGGGCAGGATAGCAGAAAATTGGTGAGCAGTGCGGCCTTTT‑CCCCTCACCCCGGCCCTC‑TCCCCGGAGGGG‑CGAGGGAGaaa < 5:881912/150‑1 (MQ=255) ttgagaGTTTTTGGCGGAATTTCTGGTTCGTATAGTACGATGTTTAGCATACTGCCCCGTTAGTGCGGGGGCAGGATAGCAGAAAATTGGTGAGCAGTGCGGCCTTTT‑CCCCTCACCCCGGCCCTC‑TCCCCGGAGGGG‑CGAGGGAGaaaa < 2:89052/145‑1 (MQ=255) tGCCAGTATTTGGCGGAATTTCTGGTTCGTAAAGTACGATGTTTAGCATACTGCCCCCTTAGTGCGGGGGCAGGATAGCAGAAAATTGGTGAGCAGTGCGGCCTTGT‑GCCCACACCCCCCCCCCC‑ACCCCCCCGGGG‑CGGGGGGGaaaaa > 6:1483219/1‑150 (MQ=255) aGTATTTGGCGGAATTTCTGGTTCGTAAAGTACGATGTTTAGCATACTGCCCCCTTAGTGCGGGGGCAGGATAGCAGAAAATTGGTGAGCAGTGCGGCCTTTT‑GCCCTCCCCCCCGCCCCC‑GCCCCCGCGGGG‑GGCGGGAGcaaaaaaaat > 5:1117687/1‑148 (MQ=255) gTATTTGGCGGAATTTCTGGTTCGTAAAGTACGATGTTTAGCATACTGCCCCCTTAGTGCGGGGGCAGGATAGCAGAAAATTGGTGAGCAGTGCGGCCTTTT‑CCCCTCACCCCGGCCCTC‑TCCCCGGAGGGG‑CGAGGGAGAAAAAAAGAGt < 4:451840/151‑1 (MQ=255) aTTTGGCGGAATTTCTGGTTCGTAAAGTACGATGTTTAGCATACTGCCCCCTTAGTGCGGGGGCAGGATAGCAGAAAATTGGTGAGCAGTGCGGCCTTTT‑CCCCTCACCCCGGCCCTC‑TCCCCGGAGGGG‑CGAGGGAGAAAAAAAGAGTg < 7:1823486/150‑1 (MQ=255) aTTTGGCGGAATTTCTGGTTCGTAAAGTACGATGTTTAGCATACTGCCCCCTTAGTGCGGGGGCAGGATAGCAGAAAATTGGTGAGCAGTGCGGCCTTTT‑CCCCTCACCCCGGCCCTC‑TCCCCGGAGGGG‑CGAGGGAGAAAAAAAGAGTGc < 7:548758/151‑1 (MQ=255) aTTTGGCGGAATTTCTGGTGCGTAAAGTACGATGTTTAGCATACTGCCCCCTTAGTGCGGGGGCAGGATAGCAGAAAATTGGTGAGCAGTGCGGCCTTTT‑CCCCTCACCCCGGCCCTC‑TCCCCGGAGGGG‑CGAGGGAGAAAAAAAGAGTg < 1:1037560/150‑1 (MQ=255) ttGGCGGAATTTCTGGTTCGTAAAGTACGATGTTTAGCATACTGCCCCCTTAGTGCGGGGGCAGGATAGCAGAAAATTGGTGAGCAGTGCGGCCTTTT‑CCCCTCACCCCGGCCCTC‑TCCCCGGAGGGG‑CGAGGGAGAAAAAAAGAGTGCg < 7:820176/150‑1 (MQ=255) tGGCGGAATTTCTGGTTCGTAAAGTACGATGTTTAGCATACTGCCCCCTTAGTGCGGGGGCAGGATAGCAGAAAATTGGTGAGCAGTGCGGCCTTTTGCCCGGCACCCCCG‑CCAC‑ACCCCGGAGGGG‑CGAGGGGGaaaaaaaaatttgcgg > 6:779319/1‑142 (MQ=255) tGGCGGAATTTCTGGTTCGTAAAGTACGATGTTTAGCATACTGCCCCCTTAGTGCGGGGGCAGGATAGCAGAAAATTGGTGAGCAGTGCGGCCTTTT‑CCCCTCACCCCGGCCCTC‑TCCCCGGAGGGG‑CGAGGGAGAAAAAAAGAGTGCgg < 4:1376384/150‑1 (MQ=255) ggCGGAATTTCTGGTTCGTAAAGTACGATGTTTAGCATACTGCCCCCTTAGTGCGGGGGCAGGATAGCAGAAAATTGGTGAGCAGTGCGGCCTTTT‑CCCCTCACCCCGGCCCTC‑TCCCCGGAGGGG‑CGAGGGAGAAAAAAAGAGTGCGgtg < 6:859697/151‑1 (MQ=255) cGGAATTTCTGGTTCGTAAAGTACGATGTTTAGCATACTGCCCCCTTAGTGCGGGGGCAGGATAGCAGAAAATTGGTGAGCAGTGCGGCCTTTT‑CCCCTCACCCCGGCCCTC‑TCCCCGGAGGGG‑CGAGGGAGAAAAAAAGAGTGCGGTGTc < 8:427607/151‑1 (MQ=255) ggAATTTCTGGTTCGTAAAGTACGATGTTTAGCATACTGCCCCCTTAGTGCGGGGGCAGGATAGCAGAAAATTGGTGAGCAGTGCGGCCTTTT‑GCCCGCACCCCCCCCCCCACCCCCCGCGGGGCCGGGGGAaaaaaaaactggggggggg > 1:1524588/1‑140 (MQ=255) gAATTTCTGGTTCGTAAAGTACGATGTTTAGCATACTGCCCCCTTAGTGCGGGGGCAGGATAGCAGAAAATTGGTGAGCAGTGCGGCCTTTT‑CCCCTCACCCCGGCCCTC‑TCCCCGGAGGGG‑CGAGGGAGAAAAAAAGAGTGCGGTGTCGt < 8:56502/151‑1 (MQ=255) aaTTTCTGGTTCGTAAAGTACGATGTTTAGCATACTGCCCCCTTAGTGCGGGGGCAGGATAGCAGAAAATTGGTGAGCAGTGCGGCCTTTT‑GCCCGCCACCCCCCCCAC‑GCCCCCCCGGGG‑GGGGGGAGAAAAAAAAAATGCggggggggt > 4:1603017/1‑144 (MQ=255) aaTTTCTGGTTCGTAAAGTACGATGTTTAGCATACTGCCCCCTTAGTGCGGGGGCAGGATAGCAGAAAATTGGTGAGCAGTGCGGCCTTGT‑GCCCGCACCCCCGCCCGC‑ACCCCGGCGGGG‑GGGGGGGGGAAAAAAAAGTggggggggggt > 2:1107735/1‑144 (MQ=255) aTTTCTGGTTCGTAAAGTACGATGTTTAGCATACTGCCCCCTTAGTGCGGGGGCAGGATAGCAGAAAATTGGTGAGCAGTGCGGCCTTTT‑CCCCTCACCCCGGCCCTC‑TCCCCGGAGGGG‑CGAGGGAGAAAAAAAGAGTGCGGTGTCGttt < 1:880200/151‑1 (MQ=255) aTTTCTGGTTCGTAAAGTACGATGTTTAGCATACTGCCCCCTTAGTGCGGGGGCAGGATAGCAGAAAATTGGTGAGCAGTGCGGCCTTTT‑CCCCTCACCCCGGCCCTC‑TCCCCGGAGGGG‑CGAGGGAGAAAAAAAGAGTGCGGTGTCGttt < 8:1055500/151‑1 (MQ=255) tttCTGTTTGGTAAAGTACGATGTTTAGCATACTGCCCCCTTAGTGCGGGGGCAGGATAGCAGAAAATTGGTGAGCAGTGCGGCCTTTT‑CCCCTCACCCCGGCCCTC‑TGCCCGGAGGGG‑CGAGGGAGAAAAAAAGAGTGCGGTGTCGttt < 6:362104/150‑1 (MQ=255) ttCTGGTTCGTAAAGTACGATGTTTAGCATACTGCCCCCTTAGTGCGGGGGCAGGATAGCAGAAAATTGGTGAGCAGTGCGGCCTTTT‑CCCCTCACCCCGGCCCTC‑TCCCCGGAGGGG‑CGAGGGAGAAAAAAAGAGTGCGGTGTCGTTTc < 6:1149511/150‑1 (MQ=255) tCTGGTTCGTAAAGTACGATGTTTAGCATACTGCCCCCTTAGTGCGGGGGCAGGATAGCAGAAAATTGGTGAGCAGTGCGGCCTTTT‑CCCCTCACCCCGGCCCTC‑TCCCCGGAGGGG‑CGAGGGAGAAAAAAAGAGTGCGGTGTCGTTTCa < 3:1806025/150‑1 (MQ=255) tCTGGTTCGTAAAGTACGATGTTTAGCATACTGCCCCCTTAGTGCGGGGGCAGGATAGCAGAAAATTGGTGAGCAGTGCGGCCTTTT‑CCCCTCACCCCGGCCCTC‑TCCCCGGAGGGG‑CGAGGGAGAAAAAAAGAGTGCGGTGTCGTTTCa < 1:1409389/150‑1 (MQ=255) cTGGTTCGTAAAGTACGATGTTTAGCATACTGCCCCCTTAGTGCGGGGGCAGGATAGCAGAAAATTGGTGAGCAGTGCGGCCTTGT‑GCCCACACCCCCCCCCGC‑ACCCCCGAGGGG‑CGAGGGCGGAAAAAAAACTGGGgtgtgggttg > 6:159626/1‑142 (MQ=255) tGGTTCGTAAAGTACGATGTTTAGCATACTGCCCCCTTAGTGCGGGGGCAGGATAGCAGAAAATTGGTGAGCAGTGCGGCCTTGT‑CCCCCCCCCCCCCCCCAC‑ACCCCCCAGGCG‑CGCCGCGGCAAAAAAGAGTGCGgggtggggtgatac > 2:1668633/1‑141 (MQ=255) ggTTCGTAAAGTACGATGTTTAGCATACTGCCCCCTTAGTGCGGGGGCAGGATAGCAGAAAATTGGTGAGCAGTGCGGCCTTTT‑CCCCTCACCCCGGCCCTC‑TCCCCGGAGGGG‑CGAGGGAGAAAAAAAGAGTGCGGTGTCGTTTCaga < 5:752455/149‑1 (MQ=255) ggTTCGTAAAGTACGATGTTTAGCATACTGCCCCCTTAGTGCGGGGGCAGGATAGCAGAAAATTGGTGAGCAGTGCGGCCTTTT‑CCCCTCACCCCGGCCCTC‑TCCCCGGAGGGG‑CGAGGGAGAAAAAAAGAGTGCGGTGTCGTTTCag < 3:1079678/148‑1 (MQ=255) ggTTCGTAAAGTACGATGTTTAGCATACTGCCCCCTTAGTGCGGGGGCAGGATAGCAGAAAATTGGTGAGCAGTGCGGCCTTTT‑CCCCTCACCCCGGCCCTC‑TCCCCGGAGGGG‑CGAGGGAGAAAAAAAGAGTGCGGTGTCGTTTCAGAGt < 3:89295/151‑1 (MQ=255) ggTTCGTAAAGTACGATGTTTAGCATACTGCCCCCTTAGTGCGGGGGCAGGATAGCAGAAAATTGGTGAGCAGTGCGGCCTTTT‑CCCCTCACCCCGGCCCTC‑TCCCCGGAGGGG‑CGAGGGAGAAAAAAAGAGTGCGGTGTCGTTTCAGAGt < 8:1179021/151‑1 (MQ=255) tCGTAAAGTACGATGGTTAGCCTACTGCCGCCTTAGTGCGGGGGCAGGATAGCAGAAAATTGGTGAGCAGTGCGGCCTTTT‑CCCCTCACCCCGGCCCTC‑TCCCCGGAGGGG‑CGAGGGAGAAAAAAAGAGTGCGGTGGCGTTTCAGAGTGa < 3:511567/150‑1 (MQ=255) cGTAAAGTACGATGTTTAGCATACTGCCCCCTTAGTGCGGGGGCAGGATAGCAGAAAATTGGTGAGCAGTGCGGCCTTTT‑CCCCTCACCCCGGCCCTC‑TCCCCGGAGGGG‑CGAGGGAGAAAAAAAGAGTGCGGTGTCGTTTCAGAGTGAgg < 7:580484/151‑1 (MQ=255) gTAAAGTACGATGTTTAGCATACTGCCCCCTTAGTGCGGGGGCAGGATAGCAGAAAATTGGTGAGCAGTGCGGCCTTTT‑CCCCTCACCCCGGCCCTC‑TCCCCGGAGGGG‑CGAGGGAGAAAAAAAGAGTGCGGTGTCGTTTCAGAGTGAggg < 2:1021181/151‑1 (MQ=255) aaaGTACGATGTTTAGCATACTGCCCCCTTAGTGCGGGGGCAGGATAGCAGAAAATTGGTGAGCAGTGCGGCCTTTT‑CCCCTCACCCCGGCCCTC‑TCCCCGGAGGGG‑CGAGGGAGAAAAAAAGAGTGCGGTGTCGTTTCAGAGTGAGGGa < 2:1095883/150‑1 (MQ=255) aaaGTACGATGTTTAGCATACTGCCCCCTTAGTGCGGGGGCAGGATAGCAGAAAATTGGTGAGCAGTGCGGCCTTTT‑CCCCTCACCCCGGCCCTC‑TCCCCGGAGGGG‑CGAGGGAGAAAAAAAGAGTGCGGTGTCGTTTCAGAGTGAGGGa < 1:760580/150‑1 (MQ=255) aaGTACGATGTTTAGCATACTGCCCCCTTAGTGCGGGGGCAGGATAGCAGAAAATTGGTGAGCAGTGCGGCCTTTT‑CCCCTCACCCCGGCCCTC‑TCCCCGGAGGGG‑CGAGGGAGAAAAAAAGAGTGCGGTGTCGTTTCAGAGTGAGGGAGt < 7:1177524/151‑1 (MQ=255) aaGTACGATGTTTAGCATACTGCCCCCTTAGTGCGGGGGCAGGATAGCAGAAAATTGGTGAGCAGTGCGGCCTTTT‑CCCCTCACCCCGGCCCTC‑TCCCCGGAGGGG‑CGAGGGAGAAAAAAAGAGTGCGGTGTCGTTTCAGAGTGAGGGAGt < 7:1560027/151‑1 (MQ=255) aGTACGATGTTTAGCATACTGCCCCCTTAGTGCGGGGGCAGGATAGCAGAAAATTGGTGAGCAGTGCGGCCTTTT‑CCCCTCACCCCGGCCCTC‑TCCCCGGAGGGG‑CGAGGGAGAAAAAAAGAGTGCGGTGTCGTTTCAGAGTGAGGGAGta < 4:876014/151‑1 (MQ=255) aCGATGTTTAGCATACTGCCCCCTTAGTGCGGGGGCAGGATAGCAGAAAATTGGTGAGCAGTGCGGCCTTTT‑CCCCTCCCCCCGGCCCTC‑TCCCCGGAGGGG‑CGAAGGAGAAAAAAAGAGTGCGGTGTGGGTTCAGAGTGAGGGAGtacat > 5:1401274/1‑151 (MQ=255) aCGATGTTTAGCATACTGCCCCCTTAGTGCGGGGGCAGGATAGCAGAAAATTGGTGAGCAGTGCGGCCTTTT‑CCCCTCACCCCGGCCCTC‑TCCCCGGAGGGG‑CGAGGGAGAAAAAAAGAGTGCGGTGTCGTTTCAGAGTGAGGGAGtaca < 6:1203455/150‑1 (MQ=255) agttttAGCATACTGCCCCCTTCGTGCGGGGGCAGTATAGCAGAAAATTGGTGAGCAGTGCGGCCTTGT‑CCCCTCACCCCGGCCCTC‑TCCCCGTAGTGG‑CGAGGGAGAAAAAAAGAGTGCGGTGTCGTTTCAGAGTGAGGGAGtacatcca < 5:1140478/148‑1 (MQ=255) tttAGCATACTGCCCCCTTAGTGCGGGGGCAGGATAGCAGAAAATTGGTGAGCAGTGCGGCCTTTT‑CCCCGCACCCCCGCCCAC‑TCCCCGGAGGGG‑CGGGGGAGAAAAAAAGAGTGGGGTGTGGTTTCAGAGTGAGGGAGtgcataaaccg > 4:1072169/1‑146 (MQ=255) gCATACTGCCCCCTTAGTGCGGGGGCAGGATAGCAGAAAATTGGTGAGCAGTGCGGCCTTTT‑CCCCTCACCCCGGCCCTC‑TCCCCGGAGGGG‑CGAGGGAGAAAAAAAGAGTGCGGTGTCGTTTCAGAGTGAGGGAGTACATACAGCGCCGa < 5:1463601/151‑1 (MQ=255) aCTGCCCCCTTAGTGCGGGGGCAGGATAGCAGAAAATTGGTGAGCAGTGCGGCCTTTT‑CCCCTCACCCCGGCCCTC‑TCCCCGGAGGGG‑CGAGGGAGAAAAAAAGAGTGCGGTGTCGTTTCAGAGTGAGGGAGTACATACAGCGCCGAACg < 5:1785194/150‑1 (MQ=255) cTGCCCCCTTAGTGCGGGGGCAGGATAGCAGAAAATTGGTGAGCAGTGCGGCCTTGT‑GCCCACACCCCCGCCCAC‑ACCCCCGAGGGG‑CGCGGGGGAAAAAAAAAGTGCGGGGTGGGTTGAGAGTGTGGGAGTACATAAAGCGCCggcccgg > 8:1584940/1‑145 (MQ=255) gCCCCCTTAGTGCGGGGGCAGGATAGCAGAAAATTGGTGAGCAGTGCGGCCTTTT‑CCCCTCACCCCGGCCCTC‑TCCCCGGAGGGG‑CGAGGGAGAAAAAAAGAGTGCGGTGTCGTTTCAGAGTGAGGGAGTACATACAGCGCCGAACGGTc < 8:1149944/150‑1 (MQ=255) cccTTAGTGCGGGGGCAGGATAGCAGAAAATTGGTGAGCAGTGCGGCCTTTT‑CCCCTCACCCCGGCCCTC‑TCCCCGGAGGGG‑CGAGGGAGAAAAAAAGAGTGCGGTGTCGTTTCAGAGTGAGGGAGTACATACAGCGCCGAACGGTCCCct < 2:1776646/151‑1 (MQ=255) ccTTAGTGCGGGGGCAGGATAGCAGAAAATTGGTGAGCAGTGCGGCCTTTT‑CCCCTCACCCCGGCCCTC‑TCCCCGGAGGGG‑CGAGGGAGAAAAAAAGAGTGCGGTGTCGTTTCAGAGTGAGGGAGTACATACAGCGCCGAACGGTCCCctc < 4:1014594/151‑1 (MQ=255) gTGCGGGGGCAGGATAGCAGAAAATTGGTGAGCAGTGCGGCCTTTT‑CCCCTCACCCCGGCCCTC‑TCCCCGGAGGGG‑CGAGGGAGAAAAAAAGAGTGCGGTGTCGTTTCAGAGTGAGGGAGTACATACAGCGCCGAACGGTCCCCTCTCCCt < 6:1941514/151‑1 (MQ=255) gCGGGGGCAGGATAGCAGAAAATTGGTGAGCAGTGCGGCCTTTT‑CCCCTCACCCCGGCCCTC‑TCCCCGGAGGGG‑CGAGGGAGAAAAAAAGAGTGCGGTGTCGTTTCAGAGTGAGGGAGTACATACAGCGCCGAACGGTCCCCTCTCCCTg < 4:1225884/150‑1 (MQ=255) cGGGGGCAGGATAGCAGAAAATTGGTGAGCAGTGCGGCCTTTT‑CCCCTCACCCCGGCCCTC‑TCCCCGGAGGGG‑CGAGGGAGAAAAAAAGAGTGCGGTGTCGTTTCAGAGTGAGGGAGTACATACAGCGCCGAACGGTCCCCTCTCCCTGAg < 4:808132/151‑1 (MQ=255) gggggCAGGATAGCAGAAAATTGGTGAGCAGTGCGGCCTTTT‑CCCCTCACCCCGGCCCTC‑TCCCCGGAGGGG‑CGAGGGAGAAAAAAAGAGTGCGGTGTCGTTTCAGAGTGAGGGAGTACATACAGCGCCGAACGGTCCCCTCTCCCTGAgg < 1:1857519/151‑1 (MQ=255) gggggCAGGATAGCAGAAAATTGGTGAGCAGTGCGGCCTTTT‑CCCCTCACCCCGGCCCTC‑TCCCCGGAGGGG‑CGAGGGAGAAAAAAAGAGTGCGGTGTCGTTTCAGAGTGAGGGAGTACATACAGCGCCGAACGGTCCCCTCTCCCTGAgg < 6:1823760/151‑1 (MQ=255) ggggCAGGATAGCAGAAAATTGGTGAGCAGTGCGGCCTTTT‑CCCCTCACCCCGGCCCTC‑TCCCCGGAGGGG‑CGAGGGAGAAAAAAAGAGTGCGGTGTCGTTTCAGAGTGAGGGAGTACATACAGCGCCGAACGGTCCCCTCTCCCTGAggg < 4:1729252/151‑1 (MQ=255) gggCAGGATAGCAGAAAATTGGTGAGCAGTGCGGCCTTTT‑CCCCTCACCCCGGCCCTC‑TCCCCGGAGGGG‑CGAGGGAGAAAAAAAGAGTGCGGTGTCGTTTCAGAGTGAGGGAGTACATACAGCGCCGAACGGTCCCCTCTCCCTGAGGga < 3:745908/151‑1 (MQ=255) ggATAGCAGAAAATTGGTGAGCAGTGCGGCCTTTT‑CCCCTCACCCCGGCCCTC‑TCCCCGGAGGGG‑CGAGGGAGAAAAAAAGAGTGCGGTGTCGTTTCAGAGTGAGGGAGTACATACAGCGCCGAACGGTCCCCTCTCCCTGAGGGAGAggg < 8:1692656/151‑1 (MQ=255) ggATAGCAGAAAATTGGTGAGCAGTGCGGCCTTTT‑CCCCTCACCCCGGCCCTC‑TCCCCGGAGGGG‑CGAGGGAGAAAAAAAGAGTGCGGTGTCGTTTCAGAGTGAGGGAGTACATACAGCGCCGAACGGTCCCCTCTCCCTGAGGGAGAggg < 5:1618496/151‑1 (MQ=255) aTAGCAGAAAATTGGTGAGCAGTGCGGCCTTTT‑CCCCTCACCCCGGCCCTC‑TCCCCGGAGGGG‑CGATGGAGAAAAAATGAGTGCGGTGTCGTTTCAGAGTGAGGGAGTACATACAGCGCCGAACGGTCCCCTCTCCCTGAGGGAGAGGGtt < 8:1777275/151‑1 (MQ=255) aGAAAATTGGTGAGCAGTGCGGCCTTTT‑CCCCTCACCCCGGCCCTC‑TCCCCGGAGGGG‑CGAGGGAGAAAAAAAGAGTGCGGTGTCGTTTCAGAGTGAGGGAGTACATACAGCGCCGAACGGTCCCCTCTCCCTGAGGGAGAGGGTTAGGGt < 5:1711814/151‑1 (MQ=255) gAAAATTGGGGAGCAGTGCGGCCTTTT‑CCCCTCACCCCGGCCCTC‑TCCCCGGAGGGG‑CGAGGGAGAAAAAAAGAGTGCGGTGTCGTTTCAGAGTGAGGGAGTACATACAGCGCCGAACGGTCCCCTCTCCCTGAGGGAGAGGGTTAGGGTg < 1:370730/151‑1 (MQ=255) aaaTTGGTGAGCAGTGCGGCCTTTT‑CCCCTCACCCCGGCCCTC‑TCCCCGGAGGGG‑CGAGTGAGAAAAAAAGAGTGCGGTGTCGTTTCAGAGTGAGGGAGTACATACAGCGCCGAACGGTCCCCTCTCCCTGAGGGAGAGGGTTAGGGTg > 1:1699970/1‑149 (MQ=255) aaaTTGGTGAGCAGTGCGGCCTTTT‑CCCCTCACCCCGGCCCTC‑TCCCCGGAGGGG‑CGAGGGAGAAAAAAAGAGTGCGGTGTCGTTTCAGAGTGAGGGAGTACATACAGCGCCGAACGGTCCCCTCTCCCTGAGGGAGAGGGTTAGGGTGAg < 5:654030/151‑1 (MQ=255) aaTTGGTGAGCAGTGCGGCCTTTT‑CCCCTCACCCCGGCCCTC‑TCCCCGGAGGGG‑CGAGGGAGAAAAAAAGAGTGCGGTGTCGTTTCAGAGTGAGGGAGTACATACAGCGCCGAACGGTCCCCTCTCCCTGAGGGAGAGGGTTAGGGTGAgg < 2:1587591/151‑1 (MQ=255) tGGTGAGCAGTGCGGCCTTTT‑CCCCTCACCCCGGCCCTC‑TCCCCGGAGGGG‑CGAGGGAGAAAAAAAGAGTGCGGTGTCGTTTCAGAGTGAGGGAGTACATACAGCGCCGAACGGTCCCCTCTCCCTGAGGGAGAGGGTTAGGGTGAgggg < 7:1013469/150‑1 (MQ=255) ggggAGCAGTGCGGCCGTTT‑CCCCTCACCCCGGCCCGC‑TCCCCGGAGGGG‑CGAGGGAGAAAAAAAGAGTGCGGTGTCGTTTCAGAGTGAGGGAGTACATACAGCGCCGAACGGTCCCCTCTCCCTGAGGGAGAGGGTTAGGGTGAGGGGgc < 2:1390489/148‑1 (MQ=255) aGTGCGGCCTTTT‑CCCCTCACCCCGGCCCTC‑TCCCCGGAGGGG‑CGAGGGAGAAAAAAAGAGTGCGGTGTCGTTTCAGAGTGAGGGAGTACATACAGCGCCGAACGGTCCCCTCTCCCTGAGGGAGAGGGTTAGGGTGAGGGGGCGCAAACg < 4:197069/151‑1 (MQ=255) ggCCTTTT‑CCCCTCACCCCGGCCCGC‑TCCCCGGCGGGG‑GGAGGGAGAAAAAAAGAGGGGGGGGGGGGTTGAGCGGGGGGGGGTTCATACAGCCGCCCACGGTCCCCGCGCCCGGGGGGGGAGGGTGAGGGTGGGGGGgggcccacgccgat > 2:418700/1‑141 (MQ=255) tttt‑CCCCTCACCCCGGCCCTC‑TCCCCGGAGGGG‑CGAGGGAGAAAAAAAGAGTGCGGTGTCGTTTCAGAGTGAGGGAGTACATACAGCGCCGAACGGTCCCCTCTCCCTGAGGGCGAGGGTTAGGGTGAGGGGGCGCAAACGCCTATGCCg > 8:1357881/1‑151 (MQ=255) tttt‑CCCCTCACCCCGGCCCTC‑TCCCCGGAGGGG‑CGAGGGAGAAAAAAAGAGTGCGGTGTCGTTTCAGAGTGAGGGAGTACATACAGCGCCGAACGGTCCCCTCTCCCTGAGGGAGAGGGTTAGGGTGAGGGGGCGCAAACGACTATGCCg > 4:580129/1‑151 (MQ=255) t‑CCCCTCACCCCGGCCCTC‑TCCCCGGAGGGG‑CGAGGGAGAAAAAAAGAGTGCGGTGTCGTTTCAGAGTGAGGGAGTACATACAGCGCCGAACGGTCCCCTCTCCCTGAGGGAGAGGGTTAGGGTGAGGGGGCGCAAACGACTATGCCGCAt > 5:185353/1‑151 (MQ=255) ccccTCACCCCGGCCCTC‑TCCCCGGAGGGG‑CGAGGGAGAAAAAAAGAGTGCGGTGTCGTTTCAGAGTGAGGGAGTACATACAGCGCCGAACGGTCCCCTCTCCCTGAGGGAGAGGGTTAGGGTGAGGGGGCGCAAACGACTATGCCGCCtt > 3:918149/1‑151 (MQ=255) ccTCCCCCCGGCCGGC‑GCCCGGGGGGGG‑GGTGGTATAAAAAACGTGGGGGGTGGGGTTTCAGTGGGAGGGAGTACATACCGCGCCCACGGGGCCCGGCTCCCTGCGGGTGGGGGTTTGGGTGCGGGGGCGCAAACGACTATGCCGCATTcc < 3:334744/151‑1 (MQ=255) tCACCCCGGCCCTC‑TCCCCGGAGGGG‑CGAGGGAGAAAAAAAGAGTGCGGTGTCGTTTCAGAGTGAGGGAGTACATACAGCGCCGAACGGTCCCCTCTCCCTGCGGGAGCGGGTTAGGGTGAGGGGGCGCAAACGACTATGCCGCCTTCCCt > 3:1653011/1‑151 (MQ=255) ccGGCCCTC‑TCCCCGGAGGGG‑CGAGGGAGAAAAAAAGAGTGCGGTGTCGTTTCAGAGTGAGGGAGTACATACAGCGCCGAACGGTCCCCTCTCCCTGAGGGAGAGGGTTAGGGTGAGGGGGCGCAAACGACTATGCCGCATTCCCTTTCGc > 6:1698198/1‑151 (MQ=255) aggCCCTC‑TCCCCGGAGGGG‑CGAGGGAGAAAAAAAGAGTGCGGTGTCGTTTCAGACTGAGGGAGTACATACAGCGCCGAACGGTCCCCTCTCCCTGACGGAGAGGGTTAGGGTGAGGGGGCGCAAACGACTATGCCGCATTCCCTTTCGcc > 6:538227/2‑151 (MQ=255) ggCCCTC‑TCCCCGGAGGGG‑CGAGGGAGAAAAAAAGAGTGCGGTGTCGTTTCAGAGTGAGGGAGTACATACAGCGCCGAACGGTCCCCTCTCCCTGAGGGAGAGGGTTAGGGTGAGGGGGCGCAAACGACTATGCCGCATTCCCTTTCGcc > 1:1218089/1‑150 (MQ=255) ggCCCTC‑TCCCCGGAGGGG‑CGAGGGAGAAAAAAAGAGTGCGGTGTCGTTTCAGAGTGAGGGAGTACATACAGCGCCGAACGGTCCCCTCTCCCTGAGGGAGAGGGGTAGGGTGAGGGGGCGCAAGCGACTATGCCGCATTCCCTTTCGcc > 4:1119503/1‑150 (MQ=255) ggCCCTC‑CCCCGGGTGGGG‑CGTGGTATAAAAAACTCGGGGGGGGGCGTTTCAGATGGAGGGATAACATACAGGGCCTAAGGGCCCCCTCCCCCTGCGGGTGCGGGTTAGGGTGCGGGGGCGCAAACGACTATGCCGCATTCCCTTTCGCCa < 5:988783/151‑1 (MQ=255) | GAAAGCCGGTATTAGCGCAAAGACGGATGATGTTGCCAGTATTTGGCGGAATTTCTGGTTCGTAAAGTACGATGTTTAGCATACTGCCCCCTTAGTGCGGGGGCAGGATAGCAGAAAATTGGTGAGCAGTGCGGCCTTTT‑CCCCTCACCCCGGCCCTC‑TCCCCGGAGGGG‑CGAGGGAGAAAAAAAGAGTGCGGTGTCGTTTCAGAGTGAGGGAGTACATACAGCGCCGAACGGTCCCCTCTCCCTGAGGGAGAGGGTTAGGGTGAGGGGGCGCAAACGACTATGCCGCATTCCCTTTCGCCA > DH1/102467‑102768 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |