Predicted mutation
evidence seq id position mutation annotation gene description
JC JC DH1 225,117 Δ4 bp :: repeat_region (+) +9 bp :: Δ1 bp coding (273‑281/528 nt) gadE ← transcriptional regulator GadE

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? DH1 225117 =12 (0.020)673 (1.150) 259/300 0.0 98.1% coding (281/528 nt) gadE transcriptional regulator GadE
?DH1 = 300335 NA (NA)noncoding (772/773 nt) repeat_region repeat region
* ? DH1 = 22512512 (0.020)708 (1.200) 264/300 0.0 98.2% coding (273/528 nt) gadE transcriptional regulator GadE
?DH1 299568 = NA (NA)noncoding (5/773 nt) repeat_region repeat region

Only 100 of 1384 total aligned reads displayed.

TGCGAAATATTGAGCGTCGACGTGATATTGCTTTCATTTTTATTTTTCAGAATCAGTTGCATAATTTTGAACTGATTATGTGAAAAACATAATTGTGAATTCTTATGGGGCAAGTGTTTACCATAAGTAATCTCAAGAAGATTTTTGATACTTTCTTTGCGGCTAACAAAATAAATAGGCGCTTTAGCTTTTAGTTTACTGATGTGATAAGGTGCCAAAACAATAATTCTCTCGGCATCTAATTTCTCCAGAAATTTAATCGCTTCTTCATCAAGGATATGATTGTGATAGGTATCAATG  >  DH1/224967‑225266
                                                                                                                                                      |                                                                                                                                                     
tgCGAAATATTGAGCGTCGACGTGATATTGCTTTCATTTTTATTTTTCAGAATCAGTTGCATAATTTTGAACTGATTATGTGAAAAACATAATTGTGAATTCTTATGGGGCAAGTGTTTACCATAAGTAATCTCAAGAAGATTTTTGATAc                                                                                                                                                       >  8:1246220/1‑151 (MQ=255)
 agagatagcgctgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccct                                                                                                                                                      <  7:1092023‑M1/2‑1 (MQ=255)
 agagatagcgctgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccct                                                                                                                                                      <  5:1959005‑M1/2‑1 (MQ=255)
 agagatagcgctgatggccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccct                                                                                                                                                      >  2:2237468‑M1/150‑151 (MQ=255)
  gagatagcgctgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccctt                                                                                                                                                     <  1:1004976‑M1/3‑1 (MQ=255)
  gagatagcgctgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccctt                                                                                                                                                     <  6:1068341‑M1/3‑1 (MQ=255)
  cGAAATATTGAGCGTCGACGTGATATTGCTTTCATTTTTATTTTTGAGAATCAGTTGCATAATTTTGAACTGATTATGTGAAAAACATAATTGTGAATTCTTATGGGGCAAGTGTTTACCATAAGTAATCTCAAGAAGATTTTTGATActt                                                                                                                                                     >  8:1064051/1‑151 (MQ=255)
   gAAATATTGAGCGTCGACGTGATATTGCTTTCATTTTTATTTTTCAGAATCAGTTGCATAATTTTGAACTGATTATGTGAAAAACATAATTGTGAATTCTTATGGGGCAAGTGTTTACCATAAGTAATCTCAAGAAGATTTTTGATActtt                                                                                                                                                    <  5:2244186/151‑1 (MQ=255)
     atagcgctgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccctttct                                                                                                                                                  >  7:1489583‑M1/146‑151 (MQ=255)
     aaTATTGAGCGTCGACGTGATATTGCTTTCATTTTTATTTTTCAGAATCAGTTGCATAATTTTGAACTGATTATGTGAAAAACATAATTGTGAATTCTTATGGGGCAAGTGTTTACCATAAGTAATCTCAAGAAGATTTTTGATActttct                                                                                                                                                  >  2:546806/1‑151 (MQ=255)
       agcggtgatggccggcggtgcttttgccgttacgcaccaccccggcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccctttcttt                                                                                                                                                >  7:2051853‑M1/144‑151 (MQ=255)
        gcgctgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTTTCTTTg                                                                                                                                               >  7:904087‑M1/143‑151 (MQ=255)
         cgctgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTTTCTTTGc                                                                                                                                              >  6:1402993‑M1/142‑151 (MQ=255)
          tGAGCGTCGACGTGATATTGCTTTCATTTTTATTTTTCAGAATCAGTTGCATAATTTTGAACTGATTATGTGAAAAACATAATTGTGAATTCTTATGGGGCAAGTGTTTACCATAAGTAATCTCAAGAAGATTTTTGATACTTTCTTTGg                                                                                                                                              <  8:528347‑M1/150‑2 (MQ=255)
             gatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTTTCTTTGCGGc                                                                                                                                           >  5:2115793‑M1/138‑150 (MQ=255)
             gatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTTTCTTTGCGGCt                                                                                                                                          >  1:1230290‑M1/138‑151 (MQ=255)
              atgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacataagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTTTCTTTGCGGCTa                                                                                                                                         >  4:159196‑M1/137‑151 (MQ=255)
              atgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaagaccatcatacactaaatcagtaagttggcagcatcaccCTTTCTTTGCGGCt                                                                                                                                          <  5:1601212‑M1/14‑1 (MQ=255)
               gTCGACGTGATATTGCTTTCATTTTTATTTTTCAGAATCAGTTGCATAATTTTGAACTGATTATGTGAAAAACATAATTGTGAATTCTTATGGGGCAAGTGTTTACCATAAGTAATCTCAAGAAGATTTTTGATACTTTCTTTGggtaatg                                                                                                                                        <  3:900952‑M1/151‑8 (MQ=255)
               gTCGACGTGATATTGCTTTCATTTTTATTTTTCAGAATCAGTTGCATAATTTTGAACTGATTATGTGAAAAACATAATTGTGAATTCTTATGGGGCAAGTGTTTACCATAAGTAATCTCAAGAAGATTTTTGATACTTTCTTTGggtaatg                                                                                                                                        >  3:1756210‑M1/1‑144 (MQ=255)
               gTCGACGTGATATTGCTTTCATTTTTATTTTTCACAATCAGTTGCATAATTTTGAACTGATTATGTGAAAAACATAATTGTGAATTCTTATGGGGCAAGTGTTTACCATAAGTAATCTCAAGAAGATTTTTGATACTTTCTTTGggtaatg                                                                                                                                        <  1:2074147‑M1/151‑8 (MQ=255)
                gtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTTTCTTTGCGGCTAAc                                                                                                                                       >  6:603977‑M1/135‑151 (MQ=255)
                   cggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTTTCTTTGCGGCTAACaaa                                                                                                                                    >  5:1432491‑M1/132‑151 (MQ=255)
                     gcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTTTCTTTGCGGCTAACAaaat                                                                                                                                  >  8:816845‑M1/130‑151 (MQ=255)
                     gTGATATTGCTTTCATTTTTATTTTTCAGAATCAGTTGCATAATTTTGAACTGATTATGTGAAAAACATAATTGTGAATTCTTATGGGGCAAGTGTTTACCATAAGTAATCTCAAGAAGATTTTTGATACTTTCTTTGggtaatgactcca                                                                                                                                  <  4:2098627‑M1/151‑14 (MQ=255)
                       gATATTGCTTTCATTTTTATTTTTCAGAATCAGTTGCATAATTTTGAACTGATTATGTGAAAAACATAATTGTGAATTCTTATGGCGCAAGTGTTTACCATAAGTAATCTAAAGAAGATTTTTGATACATTCTTTGggtaatgactccaac                                                                                                                                >  6:2092828‑M1/1‑136 (MQ=255)
                           gttttgccgttacgcaccaccccgtcagtagctgaacaggaggtacagctgatagaaacagaagccagtggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTTTCTTTGCGGCTAACAAAATAAATAg                                                                                                                            >  4:331235‑M1/124‑151 (MQ=255)
                            ttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTTTCTTTGCGGCTAACAAAATAAATAgg                                                                                                                           <  1:851302‑M1/29‑1 (MQ=255)
                             tttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaccaccatcatacactaaatcagtaaggtggcagcatcaccCTTTCTTTGCGGCTAACAAAATAAATAGgc                                                                                                                          <  4:1928198‑M1/30‑1 (MQ=255)
                             tttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTTTCTTTGCGGCTAACAAAATAAATAGgc                                                                                                                          <  2:1686791‑M1/30‑1 (MQ=255)
                             tttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTTTCTTTGCGGCTAACAAAATAAATAGgc                                                                                                                          <  7:292079‑M1/30‑1 (MQ=255)
                               tgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTTTCTTTGCGGCTAACAAAATAAATAGgcg                                                                                                                         >  2:1175751‑M1/120‑150 (MQ=255)
                                ttCATTTTTATTTTTCAGAATCAGTTGCATAATTTTGAACTGATTATGTGAAAAACATAATTGTGAATTCTTATGGGGCAAGTGTTTACCATAAGTAATCTCAAGAAGATTTTTGATACTTTCTTTGggtaatgactccaacttattga                                                                                                                         <  5:1191101‑M1/149‑23 (MQ=255)
                                 tCATTTTTATTTTTCAGAATCAGTTGCATAATTTTGAACTGATTATGTGAAAAACATAATTGTGAATTCTTATGGGGCAAGTGTTTACCATAAGTAATCTCAAGAAGATTTTTGATACTTTCTTTGggtaatgactccaacttattgata                                                                                                                       <  6:1587399‑M1/150‑25 (MQ=255)
                                  cgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTTTCTTTGCGGCTAACAAAATAAATAGGCGCttt                                                                                                                     <  1:1400059‑M1/35‑1 (MQ=255)
                                     ttttatttttCAGAATCAGTTGCATAATTTTGAACTGATTATGTGAAAAACATAATTGTGAATTCTTATGGGGCAAGTGTTTACCATAAGTAATCTCAAGAAGATTTTTGATACTTTCTTTGggtaatgactccaacttattgatagtgtt                                                                                                                  >  4:2275377‑M1/1‑122 (MQ=255)
                                     ttttatttttCAGAATCAGTTGCATAATTTTGAACTGATTATGTGAAAAACATAATTGTGAATTCTTATGGGGCAAGTGTTTACCATAAGTAATCTCAAGAAGATTTTTGATACTTTCTTTGggtaatgactccaacttattgatagtgtt                                                                                                                  >  8:669929‑M1/1‑122 (MQ=255)
                                      tttatttttCAGAATCAGTTGCATAATTTTGAACTGATTATGTGAAAAACATAATTGTGAATTCTTATGGGGCAAGTGTTTACCATAAGTAATCTCAAGAAGATTTTTGATACTTTCTTTGggtaatgactccaacttattgatagtgttt                                                                                                                 >  2:990354‑M1/1‑121 (MQ=255)
                                         atttttCAGAATCAGTTGCATAATTTTGAACTGATTATGTGAAAAACATAATTGTGAATTCTTATGGGGCAAGTGTTTACCATAAGTAATCTCAAGAAGATTTTTGATACTTTCTTTGggtaatgactccaacttattgatagtgttttat                                                                                                              <  8:379786‑M1/151‑34 (MQ=255)
                                         atttttCAGAATCAGTTGCATAATTTTGAACTGATTATGTGAAAAACATAATTGTGAATTCTTATGGGGCAAGTGTTTACCATAAGTAATCTCAAGAAGATTTTTGATACTTTCTTTGggtaatgactccaacttattgatagtgtttta                                                                                                               <  7:2241298‑M1/150‑33 (MQ=255)
                                           ttttCAGAATCAGTTGCATAATTTTGAACTGATTATGTGAAAAACATAATTGTGAATTCTTATGGGGCAAGTGTTTACCATAAGTAATCTCAAGAAGATTTTTGATACTTTCTTTGggtaatgactccaacttattgatagtgttttatgt                                                                                                            >  3:1905737‑M1/1‑116 (MQ=255)
                                           ttttCAGAATCAGTTGCATAATTTTGAACTGATTATGTGAAAAACATAATTGTGAATTCTTATGGGGCAAGTGTTTACCATAAGTAATCTCAAGAAGATTTTTGATACTTTCTTTGggtaatgactccaacttattgatagtgttttatg                                                                                                             <  7:1585708‑M1/150‑35 (MQ=255)
                                            caccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTTTCTTTGCGGCTAACAAAATAAATAGGCGCTTTAGCTTTTAGt                                                                                                           <  4:880231‑M1/45‑1 (MQ=255)
                                            caccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTTTCTTTGCGGCTAACAAAATAAATAGGCGCTTTAGCTTTTAGt                                                                                                           >  8:1366070‑M1/107‑151 (MQ=255)
                                               cAGAATCAGTTGCATAATTTTGAACTGATTATGTGAAAAACATAATTGTGAATTCTTATGGGGCAAGTGTTTACCATAAGTAATCTCAAGAAGATTTTTGATACTTTCTTTGggtaatgactccaacttattgatagtgttttatgttcag                                                                                                        <  4:1434995‑M1/151‑40 (MQ=255)
                                               cAGAATCAGTTGCATAATTTTGAACTGATTATGTGAAAAACATAATTGTGAATTCTTATGGGGCAAGTGTTTACCATAAGTAATCTCAAGAAGATTTTTGATACTTTCTTTGggtaatgactccaacttattgatagtgttttatgttca                                                                                                         <  1:60710‑M1/150‑39 (MQ=255)
                                                   aTCAGTTGCATAATTTTGAACTGATTATGTGAAAAACATAATTGTGAATTCTTATGGGGCAAGTGTTTACCATAAGTAATCTCAAGAAGATTTTTGATACTTTCTTTGggtaatgactccaacttattgatagtgttttatgttcagata                                                                                                     >  7:1377711‑M1/1‑108 (MQ=255)
                                                     cAGTTGCATAATTTTGAACTGATTATGTGAAAAACATAATTGTGAATTCTTATGGGGCAAGTGTTTACCATAAGTAATCTCAAGAAGATTTTTGATACTTTCTTTGggtaatgactccaacttattgatagtgttttatgttcagataat                                                                                                   <  6:1935097‑M1/150‑45 (MQ=255)
                                                      gtagctgaacaggagggacagcttatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTTTCTTTGCGGCTAACAAAATAAATAGGCGCTTTAGCTTTTAGTTTACTGAtgt                                                                                                 >  1:2215418‑M1/97‑151 (MQ=255)
                                                       tagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTTTCTTTGCGGCTAACAAAATAAATAGGCGCTTTAGCTTTTAGTTTACTGAtgtg                                                                                                <  3:334194‑M1/56‑1 (MQ=255)
                                                         tGCATAATTTTGAACTGATTATGTGAAAAACATAATTGTGAATTCTTATGGGGCAAGTGTTTACCATAAGTAATCTCAAGAAGATTTTTGATACTTTCTTTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccg                                                                                              >  5:324967‑M1/1‑102 (MQ=255)
                                                           cATAATTTTGAACTGATTATGTGAAAAACATAATTGTGAATTCTTATTGGGCAAGTGTTTACCATAAGTAATCTCAAGAAGATTTTTGATACTTTCTTTGggtaatgactccaacttattgatagggtttgatgttcagataatccccgac                                                                                            >  3:819465‑M1/1‑100 (MQ=255)
                                                            aTAATTTTGAACTGATTATGTGAAAAACATAATTGTGAATTCTTATGGGGCAAGTGTTTACCATAAGTAATCTCAAGAAGATTTTTGATACTTTCTTTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatg                                                                                           >  7:1945548‑M1/1‑99 (MQ=255)
                                                                 tttGAACTGATTATGTGAAAAACATAATTGTGAATTCTTATGGGGCAAGTGTTTACCATAAGTAATCTCAAGAAGATTTTTGATACTTTCTTTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactt                                                                                       <  1:1729034‑M1/150‑57 (MQ=255)
                                                                  ttGAACTGATTATGTGAAAAACATAATTGTGAATTCTTATGGGGCAAGTGTTTACCATAAGTAATCTCAAGAAGATTTTTGATACTTTCTTTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttg                                                                                     >  8:1544290‑M1/1‑93 (MQ=255)
                                                                  ttGAACTGATTATGTGAAAAACATAATTGTGAATTCTTATGGGGCAAGTGTTTACCATAAGTAATCTCAAGAAGATTTTTGATACTTTCTTTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgacttt                                                                                      <  3:1480501‑M1/150‑58 (MQ=255)
                                                                   tGAACTGATTATGTGAAAAACATAATTGTGAATTCTTATGGGGCAAGTGTTTACCATAAGTAATCTCAAGAAGATTTTTGATACTTTCTTTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgt                                                                                    >  1:371818‑M1/1‑92 (MQ=255)
                                                                    gggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTTTCTTTGCGGCTAACAAAATAAATAGGCGCTTTAGCTTTTAGTTTACTGATGTGATAAGGTGCCaa                                                                                    <  5:472394‑M1/68‑1 (MQ=255)
                                                                     ggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTTTCTTTGCGGCTAACAAAATAAATAGGCGCTTTAGCTTTTAGTTTACTGATGTGATAAGGTGCCaaaa                                                                                  >  5:1067484‑M1/82‑151 (MQ=255)
                                                                      gacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTTTCTTTGCGGCTAACAAAATAAATAGGCGCTTTAGCTTTTAGTTTACTGATGTGATAAGGTGCCAAAAc                                                                                 <  3:1185699‑M1/71‑1 (MQ=255)
                                                                      gacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTTTCTTTGCGGCTAACAAAATAAATAGGCGCTTTAGCTTTTAGTTTACTGATGTGATAAGGTGCCAAAAc                                                                                 >  8:2143380‑M1/81‑151 (MQ=255)
                                                                      aCTGATTATGTGAAAAACATAATTGTGAATTCTTATGGGGCAAGTGTTTACCATAAGTAATCTCAAGAAGATTTTTGATACTTTCTTTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcat                                                                                 >  1:1863771‑M1/1‑89 (MQ=255)
                                                                         gATTATGTGAAAAACATAATTGTGAATTCTTATGGGGCAAGTGTTTACCATAAGTAATCTCAAGAAGATTTTTGATACTTTCTTTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatg                                                                                <  2:1014371‑M1/149‑64 (MQ=255)
                                                                          gctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTTTCTTTGCGGCTAACAAAATAAATAGGCGCTTTAGCTTTTAGTTTACTGATGTGATAAGGTGCCAAAACaata                                                                             >  3:683572‑M1/77‑151 (MQ=255)
                                                                            tATGTGAAAAACATAATTGTGAATTCTTATGGGGCAAGTGTTTACCATAAGTAATCTCAAGAAGATTTTTGATACTTTCTTTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgagtttgtcatgcagct                                                                           >  3:2059916‑M1/1‑83 (MQ=255)
                                                                            tATGTGAAAAACATAATTGTGAATTCTTATGGGGCAAGTGTTTACCATAAGTAATCTCAAGAAGATTTTTGATACTTTCTTTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagct                                                                           >  2:1837638‑M1/1‑83 (MQ=255)
                                                                                  aaacagaagccactggagcacctcaaaagcaccatcatacactaaatcagtaagttggcagcatcaccCTTTCTTTGCGGCTAACAAAATAAATAGGCGCTTTAGCTTTTAGTTTACTGATGTGATAAGGTGCCAAAACAATAATtctctc                                                                     <  8:1936591‑M1/83‑1 (MQ=255)
                                                                                  aaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTTTCTTTGCGGCTAACAAAATAAATAGGCGCTTTAGCTTTTAGTTTACTGATGTGATAAGGTGCCAAAACAATAATtctctc                                                                     >  3:476253‑M1/69‑151 (MQ=255)
                                                                                    aaaCATAATTGTGAATTCTTATGGGGCAAGTGTTTACCATAAGTAATCTCAAGAAGATTTTTGATACTTTCTTTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgat                                                                   >  4:524095‑M1/1‑75 (MQ=255)
                                                                                      agaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTTTCTTTGCGGCTAACAAAATAAATAGGCGCTTTAGCTTTTAGTTTACTGATGTGATAAGGTGCCAAAACAATAATTCTCTCGGc                                                                  <  5:1797236‑M1/86‑1 (MQ=255)
                                                                                       cATAATTGTGAATTCTTATGGGGCAAGTGTTTACCATAAGTAATCTCAAGAAGATTTTTGATACTTTCTTTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgatttt                                                                >  4:1303911‑M1/1‑72 (MQ=255)
                                                                                                  agcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTTTCTTTGCGGCTAACAAAATAAATAGGCGCTTTAGCTTTTAGTTTACTGATGTGATAAGGTGCCAAAACAATAATTCTCTCGGCATCTAATTTCTcc                                                     >  4:1082548‑M1/53‑151 (MQ=255)
                                                                                                    cacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTTTCTTTGCGGCTAACAAAATAAATAGGCGCTTTAGCTTTTAGTTTACTGATGTGATAAGGTGCCAAAACAATAATTCTCTCGGCATCTAATTTCTcc                                                     <  3:222845‑M1/99‑1 (MQ=255)
                                                                                                       tATGGGGCAAGTGTTTACCATAAGTAATCTCAAGAAGATTTTTGATACTTTCTTTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgact                                                >  8:2279155‑M1/1‑56 (MQ=255)
                                                                                                           aaaacaccatcatacactaaatcagtaagttggcagcatcaccCTTTCTTTGCGGCTAACAAAATAAATAGGCGCTTTAGCTTTTAGTTTACTGATGTGATAAGGTGCCAAAACAATAATTCTCTCGGCATCTAATTTCTCAAGAAAttt                                             <  7:1724766‑M1/107‑1 (MQ=255)
                                                                                                            ggCAAGTGTTTACCATAAGTAATCTCAAGAAGATTTTTGATACTTTCTTTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgt                                           >  5:815230‑M1/1‑51 (MQ=255)
                                                                                                            aaccaccatcatacactaaatcagtaagttggcagcatcaccCTTTCTTTGCGGCTAACAAAATAAATAGGCGCTTTAGCTTTTAGTTTACTGATGTGATAAGGTGCCAAAACAATAATTCTCTCGGCATCTAATTTCTCCAGAAATTTaa                                           >  6:1767438‑M1/43‑151 (MQ=255)
                                                                                                              cAAGTGTTTACCATAAGTAATCTCAAGAAGATTTTTGATACTTTCTTTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcc                                         >  7:1214445‑M1/1‑49 (MQ=255)
                                                                                                                accatcatacactaaatcagtaagttggcagcatcaccCTTTCTTTGCGGCTAACAAAATAAATAGGCGCTTTAGCTTTTAGTTTACTGATGTGATAAGGTGCCAAAACAATAATTCTCTCGGCATCTAATTTCTCCAGAAATTTAATCg                                        <  2:2058946‑M1/112‑1 (MQ=255)
                                                                                                                 ccatcatacactaaatcagtaagttggcagcatcaccCTTTCTTTGCGGCTAACAAAATAAATAGGCGCTTTAGCTTTTAGTTTACTGATGTGATAAGGTGCCAAAACAATAATTCTCTCGGCATCTAATTTCTCCAGAAATTTAATCGct                                      >  6:375130‑M1/38‑151 (MQ=255)
                                                                                                                    tttACCATAAGTAATCTCAAGAAGATTTTTGATACTTTCTTTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccg                                   >  8:1749230‑M1/1‑43 (MQ=255)
                                                                                                                    tttACCATAAGTAATCTCAAGAAGATTTTTGATACTTTCTTTGcgtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctacaccgattttgagaacgacagcgacttccgtcccagccg                                   >  7:476393‑M1/1‑43 (MQ=255)
                                                                                                                       tacactaaatcagtaagttggcagcatcaccCTTTCTTTGCGGCTAACAAAATAAATAGGCGCTTTAGCTTTTAGTTTACTGATGTGATAAGGTGCCAAAACAATAATTCTCTCGGCATCTAATTTCTCCAGAAATTTAATCGCttcttc                                 <  5:1297556‑M1/119‑1 (MQ=255)
                                                                                                                       aCCATAAGTAATCTCAAGAAGATTTTTGATACTTTCTTTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgc                                >  2:795128‑M1/1‑40 (MQ=255)
                                                                                                                       aCCATAAGTAATCTCAAGAAGATTTTTGATACTTTCTTTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtg                                 <  4:702667‑M1/150‑111 (MQ=255)
                                                                                                                         cactaaatcagtaagttggcagcatcaccCTTTCTTTGCGGCTAACAAAATAAATAGGCGCTTTAGCTTTTAGTTTACTGATGTGATAAGGTGCCAAAACAATAATTCTCTCGGCATCTAATTTCTCCAGAAATTTAATCGCTTCTtcatc                              <  6:79604‑M1/122‑1 (MQ=255)
                                                                                                                          actaaatcagtaagttggcagcatcaccCTTTCTTTGCGGCTAACAAAATAAATAGGCGCTTTAGCTTTTAGTTTACTGATGTGATAAGGTGCCAAAACAATAATTCTCTCGGCATCTAATTTCTCCAGAAATTTAATCGCTTCTtcatca                             >  7:75020‑M1/29‑151 (MQ=255)
                                                                                                                          actaaatcagtaagttggcagcatcaccCTTTCTTTGCGGCTAACAAAATAAATAGGCGCTTTAGCTTTTAGTTTACTGATGTGATAAGGTGCCAAAACAATAATTCTCTCGGCATCTAATTTCTCCAGAAATTTAATCGCTTCTtcatc                              <  6:226355‑M1/122‑1 (MQ=255)
                                                                                                                            taaatcagtaagttggcagcatcaccCTTTCTTTGCGGCTAACAAAATAAATAGGCGCTTTAGCTTTTAGTTTACTGATGTGATAAGGTGCCAAAACAATAATTCTCTCGGCATCTAATTTCTCCAGAAATTTAATCGCTTcttcataa                             <  1:1591371‑M1/123‑3 (MQ=255)
                                                                                                                            aaGTAATCTCAAGAAGATTTTTGATACTTTCTTTGggtaatgactccaacttattgattgtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggt                           <  3:1634967‑M1/151‑117 (MQ=255)
                                                                                                                             aaatcagtaagttggcagcatcaccCTTTCTTTGCGGCTAACAAAATAAATAGGCGCTTTAGCTTTTAGTTTACTGATGTGATAAGGTGCCAAAACAATAATTCTCTCGGCATCTAATTTCTCCAGAAATTTAATCGCTTCTTCATCaa                            >  6:124429‑M1/26‑149 (MQ=255)
                                                                                                                              aatcagtaagttggcagcatcaccCTTTCTTTGCGGCTAACAAAATAAATAGGCGCTTTAGCTTTTAGTTTACTGATGTGATAAGGTGCCAAAACAATAATTCTCTCGGCATCTAATTTCTCCAGAAATTTAATCGCTTCTTCATCAAgg                          <  8:16428‑M1/126‑1 (MQ=255)
                                                                                                                              aaacagtaagttggcagcatcaccCTTTCTTTGCGGCTAACAAAATAAATAGGCGCTTTAGCTTTTAGTTTACTGATGTGATAAGGTGGCAAAACAATAATTCTCTCGGCATCTAATTTCTCCAGAAATTTAATAGATTCTTCATCAAgg                          <  2:3260‑M1/126‑1 (MQ=255)
                                                                                                                                     aagttggcagcatcaccCTTTCTTTGCGGCTAACAAAATAAATAGGCGCTTTAGCTTTTAGTTTACTGATGTGATAAGGTGCCAAAACAATAATTCTCTCGGCATCTAATTTCTCCAGAAATTTAATCGCTTCTTCATCAAGGATATGAtt                  <  2:148208‑M1/134‑1 (MQ=255)
                                                                                                                                            cagcatcaccCTTTCTTTGCGGCTAACAAAATAAATAGGCGCTTTAGCTTTTAGTTTACTGATGTGATAAGGTGCCAAAACAAGAATTCTCTCGGCATCTAATTTCTCCAGAAATTTAATCGCTTCTTCATCAAGGATATGATTGTGAt             <  2:1321401‑M1/139‑1 (MQ=255)
                                                                                                                                             agcatcaccCTTTCTTTGCGGCTAACAAAATAAATAGGCGCTTTAGCTTTTAGTTTACTGATGTGATAAGGTGCCAAAGCAATAATTCTCTCGGCATCTAATTTCTCCAGAAATTTAATCGCTTCTTCATCAAGGATATGATTGTGATAgg          <  7:624948‑M1/142‑1 (MQ=255)
                                                                                                                                                   aTACTTTCTTTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgaagactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgc    >  4:1734885‑M1/1‑12 (MQ=255)
                                                                                                                                                    ccCTTTCTTTGCGGCTAACAAAATAAATAGGCGCTTTAGCTTTTAGTTTACTGATGTGATAAGGTGCCAAAACAATAATTCTCTCGGCATCTAATTTCTCCAGAAATTTAATCGCTTCTTCATCAAGGATATGATTGTGATAGGTATCAAt   >  7:1797946‑M1/3‑151 (MQ=255)
                                                                                                                                                     aCTTTCTTTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccg  <  3:1313734‑M1/151‑142 (MQ=255)
                                                                                                                                                     aCTTTCTTTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgcc   <  5:648577‑M1/150‑141 (MQ=255)
                                                                                                                                                      |                                                                                                                                                     
TGCGAAATATTGAGCGTCGACGTGATATTGCTTTCATTTTTATTTTTCAGAATCAGTTGCATAATTTTGAACTGATTATGTGAAAAACATAATTGTGAATTCTTATGGGGCAAGTGTTTACCATAAGTAATCTCAAGAAGATTTTTGATACTTTCTTTGCGGCTAACAAAATAAATAGGCGCTTTAGCTTTTAGTTTACTGATGTGATAAGGTGCCAAAACAATAATTCTCTCGGCATCTAATTTCTCCAGAAATTTAATCGCTTCTTCATCAAGGATATGATTGTGATAGGTATCAATG  >  DH1/224967‑225266

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.