Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*DH1936,1690T.33.3% 337.9 / 172.8 138intergenic (‑13/+21)ECDH1_RS04615/ECDH1_RS04620tRNA‑Met/tRNA‑Met
Reads supporting (aligned to +/- strand):  ref base T (5/85);  new base . (4/41);  total (10/128)
Fisher's exact test for biased strand distribution p-value = 4.81e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.93e-01

Only 100 of 160 total aligned reads displayed.

GAATGGCGCTTTTTTATGGGAGACCAGAAACAAAAAAACA‑CCCGTT‑AGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGCTTTTACTTCATCAAA‑TTTGATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGCTTTACTTCATCAAATTTTAATTGGTTGCGGGGGCCGGATT  >  DH1/936019‑936318
                                                                                                                                                        |                                                                                                                                                      
gAATGGCGCTTTTTTATGGGAGACCAGAAACAATAACACA‑CCCTTT‑AGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGCt                                                                                                                                                        <  2:891630/151‑1 (MQ=255)
gAATGGCGCTTTTTTATGGGAGACCAGAAACAAAAAAACA‑CCCGTT‑AGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGCt                                                                                                                                                        <  5:1905666/151‑1 (MQ=255)
 caTGGCGCGTTTTTATGGGAGACCCCAAAAAACTAAACA‑CCCGTT‑ATCGTGTTCAATTATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGCt                                                                                                                                                        <  5:2295387/149‑1 (MQ=17)
 aaTGGCGCTTTTTTATGGGAGACCAGAAACAAAAAAACA‑CCCGTT‑AGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGCtt                                                                                                                                                       <  7:2083738/151‑1 (MQ=255)
 aaTGGCGCTTTTTTATGGGAGACCAGAAACAAAAAAACA‑CCCGTT‑AGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGCtt                                                                                                                                                       <  5:2193318/151‑1 (MQ=255)
  aTGGCGCTTTTTTATGGGAGACCAGAAACAAAAAAACA‑CCGGTT‑AGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGCttt                                                                                                                                                      <  1:845734/151‑1 (MQ=255)
    ggcccgtttttATGCCAGACCAGAAACCAATAAAGA‑ACGTAT‑ATGATGAACAATTATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGCttta                                                                                                                                                     <  6:2141051/144‑2 (MQ=11)
    ggCGCTTTTTTATGGGAGACCAGAAACAAAAAATCA‑CCGGTT‑AGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGCttta                                                                                                                                                     <  2:2007185/150‑2 (MQ=255)
    ggCGCTTTTTTATGGGAGACCAGAAACAAAAAAACA‑CCCGTT‑AGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGCtttt                                                                                                                                                     <  8:492745/150‑1 (MQ=255)
    ggCGCTTTTTTATGGGAGACCAGAAACAAAAAAACA‑CCCGTT‑AGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTCGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGCTTTTa                                                                                                                                                    <  2:2250581/151‑1 (MQ=255)
    ggCGCTTTTTTATGGGAGACCAGAAACAAAAAAACA‑CCCGTC‑AGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGCttta                                                                                                                                                     <  1:1527391/150‑2 (MQ=255)
      gtcTTTTTTATTGGAGACCAGTAACAAATAAACA‑CCCTTT‑AGGTTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGCtttactt                                                                                                                                                  <  4:1388531/149‑5 (MQ=17)
      cgcTTTTTTATGGGAGACCAGAAACAAAAAAACA‑CCCGTT‑AGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGCtttacgt                                                                                                                                                  >  6:1968713/1‑147 (MQ=255)
      cgcTTTTTTATGGGAGACCAGAAACAAAAAAACA‑CCCGTT‑AGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGCTTTTACt                                                                                                                                                  <  3:1606087/151‑1 (MQ=255)
      cgcTTTTTTATGGGAGACCAGAAACAAAAAAACA‑CCCGTT‑AGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGCTTTTACt                                                                                                                                                  <  2:1041554/151‑1 (MQ=255)
      cgcTTTTTTATGGGAGACCAGAAACAAAAAAACA‑CCAGTT‑AGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGCTTTTACt                                                                                                                                                  <  7:394230/151‑1 (MQ=255)
       gcTTTTTTATGGGAGACCAGAAACAAAAAAACA‑CCCGTT‑AGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGCTTTTACtt                                                                                                                                                 <  5:274877/151‑1 (MQ=255)
       gcTTTTTTATGGGAGACCAGAAACAAAAAAACA‑CCCGTT‑AGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGCTTTTACtt                                                                                                                                                 <  5:1064099/151‑1 (MQ=255)
       gcTTTTTTATGGGAGACCAGAAACAAAAAAACA‑CCCGTT‑AGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGCTTTTACtt                                                                                                                                                 <  6:361339/151‑1 (MQ=255)
          ttttttTGGGAGACCAGTAACAATAAAACA‑CCCTTT‑AGGTTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑TTTACTtc                                                                                                                                                <  6:47285/148‑1 (MQ=17)
          tttttATGGGAGACCAGAAACAAAAAATCA‑CCCGTT‑AGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑TTTACTtcat                                                                                                                                              <  5:2316781/150‑1 (MQ=255)
          tttttATGGGAGACCAGAAACAAAAAAACA‑CCCGTT‑AGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGCTTTTACTtca                                                                                                                                               <  6:1673379/150‑1 (MQ=255)
          tttttATGGGAGACCAGAAACAAAAAAACA‑CCCGTT‑AGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGCTTTTACTtc                                                                                                                                                <  2:1579641/149‑1 (MQ=255)
          tttttATGGGAGACCAGAAACAAAAAAACA‑CCCGTT‑AGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑TTTACTtca                                                                                                                                               <  1:2173638/149‑1 (MQ=255)
          tttttAAGGGAGACCAGATACAAAAACACA‑CCCTTT‑TGCGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑TTTACTtcat                                                                                                                                              <  3:303785/150‑1 (MQ=17)
           ttttATGGGAGACCAGTAAAAAAAAAACA‑CCCTTT‑TGGTTGTTAAATTATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑TTTACTtcatc                                                                                                                                             <  8:1074166/150‑1 (MQ=14)
           ttttATGGGAGACCAGAAACAAAAAAACA‑CCCTTT‑ATGTTGTTAAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑TTTACTtcatc                                                                                                                                             <  4:1048423/150‑1 (MQ=17)
           ttttATGGGAGACCAGAAACAAAAAAACA‑CCCGTT‑AGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGCTTTTACTtcat                                                                                                                                              <  3:1031438/150‑1 (MQ=255)
           ttttATGGGAGACCAGAAACAAAAAAACA‑CCCGTT‑AGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGCTTTTACTtcat                                                                                                                                              <  6:1476229/150‑1 (MQ=255)
           ttttATGGGAGACCAGAAACAAAAAAACA‑CCCGTT‑AGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGCTTTTACTtcat                                                                                                                                              <  6:129/150‑1 (MQ=255)
           ttttATGGGAGACCAGAAACAAAAAAACA‑CCCGTT‑AGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGCTTTTACTtcat                                                                                                                                              <  4:1393290/150‑1 (MQ=255)
           ttttATGGGAGACCAGAAACAAAAAAACA‑CCCGTT‑AGGGTGTTCAATAATTGGTTGCCTGGGCCGGAATTGAACCGACGACCTTCGGGATATGAGCCCGACGAGCTACCAGGCTGCACCACCCCGATACACCCTACTGCtttaattcaga                                                                                                                                              >  2:922451/1‑142 (MQ=18)
            tttATGGGAGACCAGAAACAAATAATCA‑CGCTTT‑AGGGTGTTCATTAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCTCGCGTCACCGTACTGC‑TTTACTtcatca                                                                                                                                            <  8:2133870/150‑1 (MQ=17)
             ttATGGGAGACCAGTAAAAAAAAATGA‑CGCGTT‑AGGGTGTTCATTAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑TTTACTTCATCaa                                                                                                                                           <  3:93890/150‑1 (MQ=17)
             ttATGGGAGACCAGATACAATTAATCA‑TCTTTT‑AGGTTGTTAAATAATTGGTTGCGGGGGACGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑TTTACTTCATCaa                                                                                                                                           <  6:2282365/150‑1 (MQ=14)
              ttagggAGACCACAACAAAAAAAACA‑CCGTTT‑ATGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCTGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑TTTACTTCATCaaa                                                                                                                                          <  3:381819/147‑1 (MQ=14)
              tATGGGAGACCTGTAACAAAAAATCA‑CGCTTT‑AGGTTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑TTTACTTCATCaaa                                                                                                                                          <  4:1864460/150‑1 (MQ=14)
              tATGGGACACCAGAAACAACAAAACA‑CCCGTA‑AGGCTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑TTTACTTCATCaaa                                                                                                                                          <  2:404633/150‑1 (MQ=17)
               aTGGGAGACCAGAAACAAAAAAACA‑CCCGTT‑AGTGTGTTCAATAATTGGTTGCGGTGGCCTGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGCTTTTACTTCATCaaa                                                                                                                                          <  8:7640/150‑1 (MQ=255)
               aTGGGAGACCAGAAACAAAAAAACA‑CCCGTT‑AGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGCTTTTACTTCATCAAA‑t                                                                                                                                        <  7:1476039/151‑1 (MQ=255)
               aTGGGAGACCAGAAACAAAAAAACA‑CCCGTT‑AGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGCTTTTACTTCATCAAA‑t                                                                                                                                        <  8:1261383/151‑1 (MQ=255)
               aTGGGAGACCAGAAACAAAAAAACA‑CCCGTT‑AGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑TTTACTTCATCAAA‑t                                                                                                                                        <  3:2098724/150‑1 (MQ=255)
                tGGGAGACCAGAAACAAAAAAACA‑CCCTTT‑ATGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑TTTACTTCATCAAA‑tt                                                                                                                                       <  6:110172/150‑1 (MQ=255)
                tGGGAGACCAGAAACAAAAAAACA‑CCCGTT‑AGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑TTTACTTGATCAAA‑ttt                                                                                                                                      >  6:1603178/1‑151 (MQ=255)
                 gggAGACCTGTTACAACAATACA‑GGCGTT‑TGGTTGTTCATTTATTGGTTGCGGGGGCCGGATTTGAACCGTCGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCAGCGTACTGC‑TTTACTTCATCAAA‑tttt                                                                                                                                     <  4:1729505/151‑2 (MQ=11)
                 gggAGACCAGAAGCAAAAAAACA‑CCCGTT‑AGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGCTTTTACTTCATCAAA‑tt                                                                                                                                       <  3:208445/150‑1 (MQ=255)
                 gggAGACCAGAACCAAAAACTGA‑CCCTTC‑TGGGTGTTCTATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATTAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑TTTACTTCATCANA‑tttt                                                                                                                                     <  5:150623/151‑2 (MQ=14)
                 gggAGACCAGAAACAAAAAAACA‑CCCGTT‑AGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGCTTTTACTTCATCAAA‑ttt                                                                                                                                      <  6:73484/151‑1 (MQ=255)
                 gggAGACCAGAAACAAAAAAACA‑CCCGTT‑AGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGCTTTTACTTCATCAAA‑ttt                                                                                                                                      <  3:34960/151‑1 (MQ=255)
                 gggAGACCAGAAACAAAAAAACA‑CCCGTT‑AGGGTGTTCAATAATTGGTTGCGGGGGCCGGACCTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGCTTTTACTTCATCAAA‑tt                                                                                                                                       <  3:52167/150‑1 (MQ=255)
                 gggAGACCACAAACAAAAAAACA‑CCCGTT‑AGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGCTTTTACTTCATCAAA‑tt                                                                                                                                       <  1:1454323/150‑1 (MQ=255)
                  ggAGACCAGAAACAAAAAAACA‑CCCGTT‑AGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGCTTTTACTTCATCAAA‑TTTg                                                                                                                                     <  5:282146/151‑1 (MQ=255)
                  ggAGACCAGAAACAAAAAAACA‑CCCGTT‑AGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGCTTTTACTTCATCAAA‑TTTg                                                                                                                                     <  3:902433/151‑1 (MQ=255)
                   gagaCCAGAAACAAAAAAACA‑CCCGTT‑AGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGCTTTTACTTCATCAAA‑TTTGa                                                                                                                                    <  8:1752501/151‑1 (MQ=255)
                   gagaCCAGAAACAAAAAAACA‑CCCGTT‑AGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGCTTTTACTTCATCAAA‑TTTGa                                                                                                                                    <  6:792239/151‑1 (MQ=255)
                   gagaCCAGAAACAAAAAAACA‑CCCGTT‑AGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCATCTCCGAAGAGCGTATTCTTCCGCAAA‑TTTgt                                                                                                                                    >  4:1134819/1‑150 (MQ=18)
                    agaCCCGAAACAAAAAAACA‑CCCGTT‑AGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑TTTACTTCATCAAA‑ttttaat                                                                                                                                  <  3:1487642/151‑5 (MQ=255)
                    agaCCAGAAACAAAAAAACA‑CCCGTT‑AGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGCTTTTACTTCATCAAA‑TTTGAt                                                                                                                                   <  4:1858709/151‑1 (MQ=255)
                    agaCCAGAAACAAAAAAACA‑CCCGTT‑AGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGCTTTTACTTCATCAAA‑TTTGAt                                                                                                                                   <  4:2132045/151‑1 (MQ=255)
                    acccccgAAACAACAACACA‑CCCGTT‑AGGGTGTTCAATCATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑TTTACTTCATCAAA‑ttttaat                                                                                                                                  <  6:1395452/145‑5 (MQ=14)
                      tccAGAAACTAATAAACT‑CGCGTT‑AGGGTGTTCAATTATTGGTTGCGGGGGGCGGTTTTGAAGCGAGGACCTTCGGGTTATGTGCCCGACGAGGTAGCAGGCTGGTCGAGCGCGCGTCACCGTACTGCTTTTACTTCATCAAA‑TTTGAtt                                                                                                                                  <  4:1137256/149‑1 (MQ=255)
                      aCCAGAAAAAAAAAAACA‑GCCTTT‑ATGTTGTTAAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑TTTACTTCATCAAA‑ttttaattg                                                                                                                                <  2:1391282/151‑7 (MQ=11)
                       ccAGAAACAAAAAAACA‑CCCGTT‑AGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGCTTTTACTTCATCAAA‑TTTGATTgg                                                                                                                                <  5:1867921/151‑1 (MQ=255)
                       ccAGAAACAAAAAAACA‑CCCGTT‑AGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGCTTTTACTTCATCAAA‑TTTGATTgg                                                                                                                                <  4:942321/151‑1 (MQ=255)
                       ccAGAAACAAAAAAACA‑CCCGTT‑AGGGTGTTCAATAATTGGTTGCGGGGGCCGGATATGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGCTTTTACTTCATCAAA‑TTTGATTgg                                                                                                                                <  5:657825/151‑1 (MQ=255)
                        cAGAAACAAAAAAACA‑CCCGTT‑AGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGCTTTTACTTCATCAAA‑TTTGATTGGt                                                                                                                               <  8:699148/151‑1 (MQ=255)
                         cgAAAAAAAAAAACA‑CCCGTT‑ATGGTGTTAAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑TTTACTTCATCAAATTTTAATTGGtt                                                                                                                              <  3:1072744/150‑1 (MQ=11)
                         aGAAACAAAAAAACA‑CCCGTT‑AGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGCTTTTACTTCATCAAA‑TTTGATTGGtt                                                                                                                              <  5:1314377/151‑1 (MQ=255)
                          tccgagctaacaca‑cCCGTG‑AGGGTGTTCAATCATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑TTTACTTCATCAAATTTTAATTGGtt                                                                                                                              <  7:412823/139‑1 (MQ=11)
                          gAAACAAAAAAACA‑CCCGTT‑AGGGTGTTCAATAATTGGTTGCGGTGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGCTTTTACTTCATCAAA‑TTTGATTGGTTg                                                                                                                             <  4:34054/151‑1 (MQ=255)
                          gAAACAAAAAAACA‑CCCGTT‑AGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGCTTTTACTTCATCAAA‑TTTGATTGGTTg                                                                                                                             <  5:1906070/151‑1 (MQ=255)
                          gAAACAAAAAAACA‑CCCGTT‑AGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGCTTTTACTTCATCAAA‑TTTGATTGGTTg                                                                                                                             <  8:1215000/151‑1 (MQ=255)
                          caaaCAAAAAAACA‑CCTTTT‑TGGTTGTTAAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑TTTACTTCATCAAATTTTAATTGGTTg                                                                                                                             <  8:1150965/150‑1 (MQ=11)
                           gcgtaaaaaaaCAGCCCCTTCAGGTTGTTAAATCATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑TTTACTTCATCAAATTTTAATTGGtt                                                                                                                              <  1:11735/147‑1 (MQ=11)
                           gacctaaaaaaCC‑CCCGTT‑AGGGTGTTCATTAATTGGTTGCGGGGGCCGTATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑TTTACTTCATCAAATTTTAATTGGTTGc                                                                                                                            <  4:2158849/146‑1 (MQ=11)
                           aaaCAAAAAAACA‑CCCGTT‑AGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTGGGGGTATGACCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGCGTTTACTTCATCAAA‑TTTGATTGGTTGc                                                                                                                            <  7:19269/151‑1 (MQ=255)
                           aaaCAAAAAAACA‑CCCGTT‑AGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGCTTTTACTTCATGAAA‑TTTGATTGGTTGc                                                                                                                            <  4:249914/151‑1 (MQ=255)
                           aaaCAAAAAAACA‑CCCGTT‑AGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGCTTTTACTTCATCAAA‑TTTGATTGGTTGc                                                                                                                            <  5:157414/151‑1 (MQ=255)
                           aaaCAAAAAAACA‑CCCGTT‑AGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGCTTTTACTTCATCAAA‑TTTGATTGGTTGc                                                                                                                            <  3:200497/151‑1 (MQ=255)
                           aaaCAAAAAAACA‑CCCGTT‑AGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGCTTTTACTTCATCAAA‑TTTGATTGGTTGc                                                                                                                            <  7:2101634/151‑1 (MQ=255)
                           aaaCAAAAAAACA‑CCCGTT‑AGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGCTTTTACTTCATCAAA‑TTTGATTGGTTGc                                                                                                                            <  1:1739307/151‑1 (MQ=255)
                           aaaCAAAAAAACA‑CCCGTT‑AGGGTGTTCAATAATTGGGTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGCTTTTACTTCATCAAA‑TTTGATTGGTTGc                                                                                                                            <  3:1182015/151‑1 (MQ=255)
                            tcacacaaaaCA‑CCCGTT‑TGGTTGTTAATTGATTGGTTGCGGGGGCCGGAGTTGAACCGACCACGTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑TTTACTTCATCAAATTTTAATTGGTTGc                                                                                                                            <  8:1535317/144‑1 (MQ=11)
                            aaCAAAAAAACA‑CCCGTT‑AGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑TTTACTTCATCAAA‑tttttattg                                                                                                                                >  1:1215095/1‑139 (MQ=255)
                             aCAAAAAAACA‑CCCGTT‑AGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGCTTTTACTTCATCAAA‑TTTGATTGGTTGCgg                                                                                                                          <  7:1875211/151‑1 (MQ=255)
                             aCAAAAAAACA‑CCCGTT‑AGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGCTTTTACTTCATCAAA‑TTTGATTGGTTGCgg                                                                                                                          <  5:118709/151‑1 (MQ=255)
                              cAAAAAAACC‑CCCGTT‑AGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGCTTTTACTTCATCAAA‑TTTGATTGGTTGCggg                                                                                                                         <  7:179899/151‑1 (MQ=255)
                              cAAAAAAACA‑CCCGTT‑AGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGCTTTTACTTCATCAAA‑TTTGATTGGTTGCggg                                                                                                                         <  7:1458648/151‑1 (MQ=255)
                              cAAAAAAACA‑CCCGTT‑AGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGCTTTTACTTCATCAAA‑TTTGATTGGTTGCggg                                                                                                                         <  6:514187/151‑1 (MQ=255)
                              cAAAAAAACA‑CCCGTT‑AGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGCTTTTACTTCATCAAA‑TTTGATTGGTTGCggg                                                                                                                         <  2:276037/151‑1 (MQ=255)
                               aaaaaaaCA‑CCGGTT‑AGGGTGTTCAATATTTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCAACGTACTGCTTTTACTTCATCAAA‑TTTGATTGGTTGCgggg                                                                                                                        <  1:2002860/151‑1 (MQ=255)
                                aaaaaaCA‑CCCGTT‑AGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGCTTTTCGTGCTGCAAT‑TTTTATTGGTTGCaggtg                                                                                                                       >  3:2159435/1‑149 (MQ=17)
                                 aaaaaCA‑CGCGTG‑AGGGTTTTCAATAATTGGTTGCGGGGGCCGGATTTGAACGGACGACCTTCGGGTTATCAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGCTTTTACTTCATGAAA‑TTTGATTGGTTGCGGGGGc                                                                                                                      <  6:263053/151‑1 (MQ=17)
                                  aaaaCA‑CCCGTT‑AGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGCTTTTACTTCATCAAA‑TTTGATTGGTTGCGGGGGcc                                                                                                                     <  7:122602/151‑1 (MQ=255)
                                   aaaCA‑CCCGTT‑AGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGCTTTTACTTCATCAAA‑TTTGATTGGTTGCGGGGGCCg                                                                                                                    <  3:1520728/151‑1 (MQ=255)
                                          cggTT‑AGGGTGTTCAAAAATTGGTGGCGGGGGCGGGATTGGACCGGACGACCTTCGGGTTATGAGCCCGCCGAGCTACCATGCTTCTCCACCCCGCCTCAACGTAATGCGTTTACTTCATCAAA‑TTTGATTGGTTGCGGGGGCCGGATTTg                                                                                                              <  7:995329/149‑1 (MQ=17)
                                                aGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑TTTACTTCATCAAA‑ttttaattg                                                                                                                                <  4:2133751/127‑7 (MQ=9)
                                                        cAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGCTTTTACTTCATCAAA‑TTTGATTGGt                                                                                                                               >  3:1783341/1‑121 (MQ=255)
                                                                                                                                                     tGCTTTTACTTCATCAAA‑TTTGATTGGTTGAGGGGGCCGGATTTGAACCGACGAAATTCGGGATATGAGCCAGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTAGTGCTTTACTTCATCAAATTTTAATTGGtt                >  5:382184/1‑139 (MQ=18)
                                                                                                                                                        ttttACTTCATCAAA‑TTTGATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTCCTCCACCCCGCGTCACCGTAATGCATAACTTCAACAAAATAAAATTGAttcaaggggaagtata  >  4:375756/1‑136 (MQ=14)
                                                                                                                                                        |                                                                                                                                                      
GAATGGCGCTTTTTTATGGGAGACCAGAAACAAAAAAACA‑CCCGTT‑AGGGTGTTCAATAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGCTTTTACTTCATCAAA‑TTTGATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGCTTTACTTCATCAAATTTTAATTGGTTGCGGGGGCCGGATT  >  DH1/936019‑936318

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑