| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | DH1 | 1,065,614 | 0 | A | G | 28.5% | 450.6 / 212.1 | 303 | intergenic (+49/‑14) | ECDH1_RS05245/ECDH1_RS05250 | tRNA‑Arg/tRNA‑Arg |
| Reads supporting (aligned to +/- strand): ref base A (126/60); new base G (62/12); total (191/112) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 9.09e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.31e-01 | |||||||||||
Only 100 of 335 total aligned reads displayed.
CTGCAGTAAAGTAAGTTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGG‑TCGGAGGTTCGAATCCTCCCGGATGCACCATCTCTTACTTGATATGGCTTTAGTAGCGGTAT‑‑C‑‑AATATCAGCAGTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTCAGCAATGAAGGTATCGAAGAGGTAGCGGAATTAACCGCAGGCA > DH1/1065465‑1065764 | agtaaagtaaGTTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGG‑TCGGAGGTTCGAATCCTCCCGGATGCACCATCTAATACTATATATTGAGCAAGGAG‑GGTATC‑C‑‑AATATCAACAGTAaaatacat > 7:145976/1‑151 (MQ=11) taagtTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGG‑TCGGAGGTTCGAATCCTCCCGGATGCACCATCTGGTACTAGATATGGAGTTAGTAGCGGTTG‑‑C‑‑AATATCAGGAGTAAATTAAATTTcgcg > 8:57150/1‑150 (MQ=17) gccgccGGAGCTCAGCTGGAGAGTGTACTCGGCTCCGATCCGGTGGG‑TCGGAGGTTCGAATCCTCCCGGATGCACCATCTCTTACTTGATATGGCTTTAGTAGCGGTAT‑‑C‑‑AATATCAGCAGTAAAATAAATTTCCCGATGCATCCGTAGCt < 3:1884035/147‑1 (MQ=18) aTCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGG‑TCGGAGGTTCGAATCCTCCCGGATGCACCATATAGTACTAGATATTGCGGAAGTATGGGTTG‑‑C‑‑AATATCTACAGGAAAATAACTTTCCCGATggggccgtatatc > 1:339597/1‑138 (MQ=9) gacAGCTGGATATACTACTCGGCGACG‑AGCGCGCGGCTCGGCGCGTCTAATCCTCCCGGATGCACCATCTCTTACTTGATATGGCTTTAGTAGCGGTAT‑‑C‑‑AATATCAGCAGTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATa < 1:2216816/149‑1 (MQ=14) cAGCTGGATAGAGTACTCGGCTACGAACCGTTCGG‑TCGGAGGTTGGAATCCTCCCGGATGCACCATCTCTTAATTGATATGGCTTTAGTAGCGGTAT‑‑C‑‑AATATCAGCAGTAGAATAAGTTTtcccg < 2:1302442/126‑3 (MQ=17) cAGCTGGATAGAGTACTCGGCTACGAACCGAGCGC‑TCGGAGGTTTTTTTTTTAATGTTTGGTCGATCTCTTAGTTGATATGTGTTTATTAGAGTTAT‑‑T‑‑AATATCAGGAGTATATTAATTTTTCATTTGCATCCGTAGCTCAGCTGGATa < 4:483765/149‑1 (MQ=9) tAGAGTACTCGGCTACGAACCGAGCGG‑TCGGAGGTTCGAATCCTCCCGGATGCACCATCTCTTACTTGATATGGCTTTAGTAGCGGTAT‑‑C‑‑AATATCAGCAGTAcaata > 1:2045435/1‑108 (MQ=255) aCTCGGCTACGAACCGAGCGG‑TCGGAGGTTCGAATCCTCCCGGATGCACCATCTCTTACTTGATATGGCTTTAGTAGCGGTAT‑‑C‑‑AATATCAGCAGTAAAATAAGttt > 6:799577/1‑107 (MQ=255) cTCGGCTACGAACCGAGCGG‑TCGGAGGTTCGAATCCTCCCGGATGCACCAAGAAATAAATAAAATCGAGTTAGTAAAGGTAT‑‑A‑‑ATTATCAGCAGTAAAATAAATTTCACGAAGCATCAGTAAAAAAGATGGATAGAGTACTCGGCTACGac > 8:1781686/1‑150 (MQ=12) tCGGCTACGAACCGAGCGG‑TCGGAGGTTCGAATCCTCCCGGATGCACCATCTGGTACTTGATATGGCGGTAGTAGGGGTTG‑‑G‑‑AATATCGGGCGTAAAATAACTTTGCCGATGAATACGGAGCTAATCGGGATAGAGTACTCGGCTACgccg > 7:565556/1‑148 (MQ=16) cTACGAACCGAGCGG‑TCGGAGGTTCGAATCCTCCCGGATGCACCATCTCTTACTTGATATGGCTTTAGTAGCGGTAT‑‑C‑‑AATATCAGCAGTAgaataa > 1:2291171/1‑97 (MQ=255) cGAACGCAGCGC‑TCGGAGGTTCTAATCCTCCCGGATGCACCATCTCTTACTTGATATGGCTTTAGTAGCGGTAT‑‑C‑‑AATATCAGCAGTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCgg < 3:1140360/151‑1 (MQ=255) atcgcgccgctCGGAGAGTCTAATCCTCCCTTATTCACCATCTCTTACTTTATATGTCTTTACTAGCGCTAT‑‑C‑‑AATATCAGCAGTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTc < 3:1192647/141‑1 (MQ=14) cgtgCGG‑TCGGAGTGTCGAATCCTCCCTGATGCACCATCTCTTACTTGATATGGCTTTAGTAGCGGTAT‑‑C‑‑AATATCAGCAGTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGa < 8:123971/148‑1 (MQ=255) gg‑TCGGAGGTTCGAATCCTCCCGGATGCACCATCTCTTACTTGATATGGCTTTAGTAGCGGTAT‑‑C‑‑AATATCAGCAGTAAAATAACTTTGCCGCTGCATGCGTAGCGGCGCTGGATAGAGTACTCGGCTACGCAACGAGGGGTCggcccacc > 5:1407776/1‑145 (MQ=17) tCGGAGGTTCGAATCCTCCCGGATGCACCATCTGGTACTTGATATTGCTGTAGTAGCGGTAT‑‑C‑‑AATATCAGCAGTAAAATAAATTTCCCGATGCTTAGGTAGCTCTTCTGGATAGAGTGCTCGGCTACGATACGCGCGGTCGGAGGTTCg > 5:1997056/1‑150 (MQ=17) gAGGTTCGAATCCTCCCGGATGCACCATATGTTACTTGATATGGAGGTAGTAGCGTTAG‑‑C‑‑AATATCAGCAGGAAAATAAATTTCCCGATGCATCAGTAGCACAGGGTTATAGAGAAGACGGATACGCACGGAGCGGTCGTCGGTTCCAAtc > 2:749256/1‑151 (MQ=9) cgaacgcgcccGGTAGCACGATCTATTTATTTATCTCGCTTTACTAGCTTTAT‑‑A‑‑AATATCTGCAGTAAAATAATTTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTccc < 1:1644064/142‑1 (MQ=11) taaTCCTCCCGGATGCACCATCTCTTACTTGATATGGCTTTAGTAGCGGTAT‑‑C‑‑AATATCAGCAGTaaaa < 7:1723663/68‑1 (MQ=38) gAATCCTCACGGATGCTCGATCTATTTCTTGATCTGTGTTTAGGCGCTGTAT‑‑C‑‑AATATCAGCAGTAAAATAACTTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCgg < 7:43538/151‑1 (MQ=14) aaTCCTCCCGGATGCACCATCTCTTACTTGATATGGCTTTAGTAGCGGTAT‑‑C‑‑AATATCAGCAGTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTccc < 7:2116497/148‑1 (MQ=40) aaTCCTCCCCGATGCACCATCTCTTACTTGACATGGCTTTAGTAGCGCTCT‑‑A‑‑AATATCAGCAGTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCg < 7:1797117/149‑1 (MQ=255) tcctccCGGATGCACCATCTCTAGATAGATATAGCTTAATTAACGGTAA‑‑C‑‑AATATCATCACGATAATAAATATCCCTATTCGGCCGATCATGAAAAAAAAAGAGTACTCGGCTCCGCGCCGCGCGGTCGGAGGTTGGAGTCCTCCCGGATg > 2:2019431/1‑151 (MQ=2) cctccCGGCTTCACCATCTCTTAGTTGATAGGGGTTTTCTCGCGTTAT‑‑C‑‑AATATCAGCAGTAAACTAAATTTCCCTATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGc < 7:342747/151‑1 (MQ=11) ccGGATGCACCATCTCTTACTTGATATGGCTTTAGTAGCGGTAT‑‑C‑‑AATATCAGCAGTAaaataaat > 8:2091767/1‑66 (MQ=255) atggcacATCTCTTATTTTATCGGGCTTTAGTAGCGATAT‑‑C‑‑AATATCAGCAGTAAAATAAGTTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATAtt < 5:698067/145‑1 (MQ=11) gCACCATCTCTTACTTGATATGGCTTTAGTAGCGGTAT‑‑C‑‑AATATCAGCAGTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATtct > 8:1947509/1‑151 (MQ=39) cACCTTCTCTTATTTTATATGGCTTTAGTAGCGTTTT‑‑A‑‑ATTTTCTGCTTTAAATTATATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCatat < 2:2233905/147‑1 (MQ=11) cATCTCTTACTTGATATGGCTTTAGTAGCGGTAT‑‑C‑‑AGTATCAGCAGTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGc > 5:1586215/1‑97 (MQ=255) aTCTCTTACTTGATATGGCTTTAGTAGCGGTAT‑‑C‑‑AATATCAGCAGTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGa > 1:440431/1‑150 (MQ=40) tctcTTACTTGATATGGCTTTAGTAGCGGTAT‑‑C‑‑AATATCAGCAGTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGaa > 4:1750536/1‑150 (MQ=255) ctctTACTTGATATGGCTTTAGTAGCGGTAT‑‑C‑‑AATATCAGCAGTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAAt > 1:779484/1‑151 (MQ=255) tctTACTTGATATGGCTTTAGTAGCGGTAT‑‑C‑‑AATATCAGCAGTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATc > 6:991907/1‑151 (MQ=255) tctTACTTGATATGGCTTTAGTAGCGGTAT‑‑C‑‑AATATCAGCAGTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATc > 7:1258093/1‑151 (MQ=255) tctTACTTGATATGGCTTTAGTAGCGGTAT‑‑C‑‑AATATCAGCAGTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATc > 7:131211/1‑151 (MQ=255) ctTACTTGATATGGCTTTAGTAGCGGTAT‑‑C‑‑AATATCAGCAGTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCt > 6:2122894/1‑151 (MQ=255) tACTTGATATGGCTTTAGTAGCGGTAT‑‑C‑‑AATATCAGCAGTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTc > 3:740804/1‑151 (MQ=255) ttGATATGGCTTTAGTAGCGGTAT‑‑C‑‑AATATCAGCAGTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTACGAAAACTTCAGc > 2:131867/1‑151 (MQ=255) ttGATACGGCTTTAGTAGCGGTAT‑‑CAAAAAATCTGCAGTAAAGTAAGTTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCTATATCttgc > 3:1788915/1‑149 (MQ=14) tGATATGGCTTTAGTAGCGGTAT‑‑C‑‑AATATCAGCAGTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTCAGc > 6:419894/1‑150 (MQ=255) tGATAGGGCTTTAGTAGCGGTAT‑‑A‑‑AATATCAGCAGTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTCAGc < 5:557215/150‑1 (MQ=255) gATATGGCTTTAGTAGCGGTAT‑‑C‑‑AATATCAGCAGTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCAACAAATTTTCCGTAAAGATCAGCa > 4:134283/1‑150 (MQ=11) atatGGCTTTAGTAGCGGTAT‑‑C‑‑AATATCAGCAGTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTCAGCAAt > 1:1792073/1‑151 (MQ=255) gCTTTAGTAGCGGTAT‑‑CAAAAAATCTGCAGTAAAGTAAGTTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATACTCCCGGATGCACCATATTGTCCTAAATATTCAGCAATGa > 4:846465/1‑150 (MQ=11) cTTTAGTAGCGGTATTAA‑‑AAAATCTGCAGTAAAGTAAGTTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAGAtatgaagagaccacg > 1:2266241/1‑137 (MQ=14) cTTTAGTAGCGGTAT‑‑CAAAAAATCTGCAGTAAAGTAAGTTTCCCGATGCATCCTTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCTAATCCTCCCGGATGCACCATATTCTACGAAATATGCAGAAATTaa > 8:1465596/1‑150 (MQ=14) cTTTAGTAGCGGTAT‑‑C‑‑AATATCAGCAGTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTCAGCAATGAAGGt > 4:198349/1‑151 (MQ=255) tttAGTAGCGGTAT‑‑CAAAAAATCTGCAGTAAAGTAAGTTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGACATATTCAGCTATGACgg > 5:1773232/1‑151 (MQ=11) tttAGTAGCGGTAT‑‑CAAAAAATCTGCAGTAAAGTAAGTTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATATTCATAAATTAAgg > 4:937797/1‑151 (MQ=11) tttAGTAGCGGTAT‑‑C‑‑AATATCAGCAGTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTCAGCAATGAAGGt > 8:525933/1‑150 (MQ=255) ttAGTAGCGGTAT‑‑CAAAAAATCTGCAGTAAAGTAAGTTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTACGAAATATTCCGAAATGaccct > 6:1289744/1‑147 (MQ=11) tagtagCGGTAT‑‑C‑‑AATATCAGCAGTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTCAGCAATGAAGGTATc > 4:345093/1‑151 (MQ=255) gtagCGGTAT‑‑C‑‑AATATCAGCAGTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTCAGCAATGAAGGTATCg > 8:415951/1‑150 (MQ=255) cgctctat‑‑a‑‑AATATCACCAGTAAAATAAATTTCCTGATGCATCCGTAGCTCATCTGGATATACTAATCGGCTACTATGCGTTGGCGCTTTGGGTGGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTCAGCAATGAAGGTATCGa < 8:1663821/144‑1 (MQ=9) agctttat‑‑a‑‑AATATCAGCAGTAAATTAATTTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTCAGCAATGAAGGTATCGAag < 4:101279/146‑1 (MQ=255) agCTGTAT‑‑C‑‑AATATCAGCAGTAAACTAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTCAGCAATGAAGGTATCGAag < 7:128223/151‑1 (MQ=255) agCGGTAT‑‑C‑‑AATATCAGCAGTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTCAGCAATGAAGGTATCGa > 6:1812312/1‑149 (MQ=255) agCGGTAT‑‑C‑‑AATATCAGCAGTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTCAGCAATGAAGGTATCGa > 3:253324/1‑149 (MQ=255) agCGGTAT‑‑C‑‑AATATCAGCAGTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTCAGCAATGAAGGTATCGa > 5:1067575/1‑149 (MQ=255) attttcgctattactatCTGCAGTAAAGTAATTTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTCAGCAATGAAGGTATCg < 6:1070033/137‑1 (MQ=11) gatat‑‑a‑‑AAAATCTGCAGTAAATTAAGTTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTCAGCAATGAAGGTATCGAAGAgg < 6:1653573/149‑1 (MQ=14) tAT‑‑C‑‑AATATCAGCAGTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTCAGCAATGAAGGTATCGAAGAGGt > 4:1593150/1‑150 (MQ=255) aT‑‑C‑‑AATATCAGCAGTAAACTAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTCAGCAATGAAGGTATCGAAGAGGTAg < 7:1656101/151‑1 (MQ=255) aT‑‑C‑‑AATATCAGCAGTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTCAGCAATGAACGTATCGAAGAGGt > 2:36982/1‑149 (MQ=255) tatcaaaaaatCTGCAGTAAAGTAAGTTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTATACTAAATATTCATCAATGAACGTATAGAATAgg > 4:1171654/10‑151 (MQ=11) t‑‑C‑‑AATATCAGCAGTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTCAGCAATGAAGGTATCCAAGAGGTAGc > 3:1579102/1‑151 (MQ=255) gtcttcatatcttgcagTAAATTAATTTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTCAGCAATGAAGGTATCGAAGAgg < 2:984755/138‑1 (MQ=14) gtatctaaatatgcatTAAACTAATTTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTCAGCAATGAAGGTATCGAAGAGGt < 8:1352066/139‑1 (MQ=11) gcttcatatcttgcagTAAAGTAAGTTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTCAGCAATGAAGGTATCGAAGAGGt < 1:1297706/139‑1 (MQ=14) caaaaaatCTGCAGTAAAGTAAGTTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTGTCCGACATCTTGAGGTAGTATGGGTTCGAAGAGGt > 3:1384279/7‑149 (MQ=11) caaaaaatCTGCAGTAAAGTAAGTTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTGTACGTTATCTTGAGCAATGAGGGGTTCGAatagct > 5:34459/7‑147 (MQ=11) c‑‑AATATCAGCAGTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTCAGCAATGAAGGTATCGAAGAGGTAGCg > 1:586269/1‑151 (MQ=255) c‑‑AATATCAGCAGTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTCAGCAATGAAGGTATCGAAGAGGTAGCg > 5:307961/1‑151 (MQ=255) cagatctccgcatTAAAATACATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGTAACCTTCAGCAATGAAGGTATCGAAGAGATAg < 7:2184396/141‑1 (MQ=11) aaTATCAGCAGTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTCAGCAATGAAGGTATCGAAGAGGTAGCgg > 3:414424/1‑151 (MQ=255) aaTATCAGCAGTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCG‑ATCCTCCCGGATGCACCATATTCTCCGAAATATTCAGAAATGAAGGTATCGAAGAGGTAGCgg > 2:541069/1‑150 (MQ=255) atatCAGCAGTAAAATACATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGa < 3:475122/98‑1 (MQ=255) tatCAGCAGTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTAc > 2:123840/1‑63 (MQ=255) aatCTGCAGTAAAGTAAGTTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCTTCATATTCCGCTATGATCGTATCGAATATGTacagga > 1:1364913/2‑145 (MQ=1) aatCTGCAGTAAAGTAAGTTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTCAGCAATGAAGGGATGGAAGAGGTacagga > 1:1098478/2‑145 (MQ=14) atCAGCAGTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAAtcc > 1:1443484/1‑89 (MQ=40) atCAGCAGTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTCAGCAATGAAGGTATCGATGAGGTAGCGGatt > 4:275318/1‑149 (MQ=255) tctgcagTAAAGTAAGTTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTGTACGAGATATTGAGGTATGAACGTATGGAATATGTCCCGGAAtt > 1:1862282/4‑151 (MQ=1) cagcagTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAAACTTCAGCAATGAAGGTATCGAAGAGATAg > 8:2183040/1‑143 (MQ=255) tgcagTAAAGTAAGTTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTACGAAATATTCAGGAATGATGGTATGGAAGAggagatctcaaga > 1:985402/2‑139 (MQ=14) gcagTAAACTAAGTTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTCAGCAATGAAGGTATCGAAGAGGTAGCGGAATTaa < 3:2163632/150‑1 (MQ=255) gcagTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTCAGCAATGAAGGTATCGAAGAGGTAGCGGAATTAAc < 6:307575/151‑1 (MQ=255) aacttaaataaatATCCGTATGTCTCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTCAGCAATGAAGGTATCGAAGAGGTAGCGGAATTAAcc < 6:651978/146‑1 (MQ=14) agTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCAcc < 2:1708684/96‑1 (MQ=35) agTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCAcc > 1:1709492/1‑96 (MQ=35) gTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTCAGCAATGAAGGTATCGAAGAGGTAGCGGAATTAACCGc > 1:693686/1‑151 (MQ=255) tAAAGTAAGTTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTGTCCGAGATCTGCAGGTATGAAGGGTTGGAAGAGGTAGCGGAATTTACCgtt > 5:1369055/1‑149 (MQ=14) aaagTAATTTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTCAGCAATGAAGGTATCGAAGAGGTAGCGGAATTAACCGCAg < 4:45886/151‑1 (MQ=255) aaaaTAACTTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTCAGCAATGAAGGTATCGAAGAGGTAGCGGAATTAACCGCa < 3:896613/150‑1 (MQ=255) aaaaTAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAAt > 8:1056306/1‑78 (MQ=38) aaataaatTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTAc > 1:1951708/1‑52 (MQ=40) aaataaatTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTAc < 2:1951062/52‑1 (MQ=40) ataaatTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAAt < 5:2262084/75‑1 (MQ=35) ataaatTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTCAGCAATGAAGGTATCGAAGAGGTAGCGGAATTAACCGCAGGcn < 7:1933962/151‑2 (MQ=255) | CTGCAGTAAAGTAAGTTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGG‑TCGGAGGTTCGAATCCTCCCGGATGCACCATCTCTTACTTGATATGGCTTTAGTAGCGGTAT‑‑C‑‑AATATCAGCAGTAAAATAAATTTCCCGATGCATCCGTAGCTCAGCTGGATAGAGTACTCGGCTACGAACCGAGCGGTCGGAGGTTCGAATCCTCCCGGATGCACCATATTCTCCGAAATCTTCAGCAATGAAGGTATCGAAGAGGTAGCGGAATTAACCGCAGGCA > DH1/1065465‑1065764 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |