| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | DH1 | 2,169,568 | 0 | C | G | 23.7% | 616.8 / 38.2 | 340 | A664A (GCG→GCC) | rsxC | electron transporter RsxC |
| Reads supporting (aligned to +/- strand): ref base C (42/190); new base G (5/67); total (68/272) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.43e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 351 total aligned reads displayed.
GGATCAACCTGTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGT > DH1/2169419‑2169718 | aTCAACCTGTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCAGATTGCGAGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACATGTACATCTCCCTCCGCATTACCCGGAAGCAGTTCGCGATTgcgcgc > 5:1813115/1‑150 (MQ=17) cAACCTGTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCGACCTGTTGATCTGTATCCGCAATAGCCGGTTGCTCTTCACGTTTGCGCGCttt > 8:1249086/1‑151 (MQ=14) acgtGTTCTTCTGGTACCGGATTAGCCTGTTGCTGGTCGTGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGGTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCttt < 3:1620272/146‑1 (MQ=37) acTGTTCTTCTGGTACCGCATTAGCCTGGTGCTGTTCCAGGTTGAGTGCTTTTGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGc < 8:323245/150‑1 (MQ=255) gTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCt < 5:1159468/149‑1 (MQ=255) tcttctGGTACCGCATTAGCCTGTTGCTGTGCCTGCTTGCGGGCGTTGGCGCGTGCAATAGCCGCGTCGACGGCAGCTTTGCGCGGATCAACCAGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCgg < 6:1160588/150‑1 (MQ=18) cttctGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGAGCGGATCAACCTGTTCTTCTGGATCCGAATTATCCGGTTGCTGTTACAGGTTGCGAGCTTTTGCTCtgg > 2:1553184/1‑150 (MQ=17) ttctGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCGGCTTCAACTCCGCAGATGCGCGGATAAACCTGTTCTTGTGTCTCCGCATTAGCAGGTTGATGTTCCCGTTTGCGTTATTTGGCTCGGGc > 2:2293442/1‑150 (MQ=17) tctGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCa < 7:746525/150‑1 (MQ=255) tctGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACATCAAATAACCGCTTCGACTACAGCAAGACTCTGATCAACATGTTATAATTCCTCCGCATAAGCATGATTATATTAAAGTTTGCGCGCTTTGGGTCgggg > 6:829131/1‑148 (MQ=9) tctGGGACCGCATTAGCCTGGTGCTGGTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGc < 7:1109397/149‑1 (MQ=255) ggTACCGCCGTAGCCGGTTGCTGTTCCAGCTTGCGGGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAg < 7:44067/151‑1 (MQ=255) ggTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTGCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCaa < 2:1873941/148‑1 (MQ=255) gttcggcttgaGCCTGTTGCTGTTCGAGTTTGCGTGCTTTTGCGCGTGCAATAGCCGCTTCGACTGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGc < 8:533117/141‑1 (MQ=25) aCCTCATTACCCTTGTGCTGGTCCTGCTTGCGGGCGTTGGCGCGTGCAATAGCCGCGTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCg < 1:1884161/150‑1 (MQ=21) ccGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCCACCTGTTCTTCTGGCTCCCCATTAGCCGGTGGCTGCTCCACTTAGCGCGCGAAGTCTCGGGCAATAGCGGc > 7:34249/1‑151 (MQ=14) ccGCATTAGCCTGGTGCTGTTCCCGCTTGCGTGCGTTCGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGc < 5:1949504/151‑1 (MQ=255) cGCATTAGCCTGTTGCTGGTGCAGCTTGCGTGCGTTCGCGCGTGCAATAGCCGCTTCTACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCt < 4:988948/151‑1 (MQ=255) caatAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTCGCGCGTGCAATAGCCGCTTCTACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTc < 4:1494999/148‑1 (MQ=255) tatccTGGTGCTGTTCCAGCTTGCGTGCTTTGGCGCGGGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGa < 4:179765/147‑1 (MQ=255) cTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGAcggcg > 6:509334/1‑151 (MQ=255) gTTGCTGTTCCCGCTTGCGTGCGTTGGCGCGGGCAATAGCCGCGTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGAcggcg < 6:2135768/149‑1 (MQ=255) gCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGATCCGCATTAGCCTGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCttt > 7:902935/1‑151 (MQ=255) gCTGTTCCAGCTTGCGGGCGTTGGCGCGTGCAATAGCCGCGTCTACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCttt < 2:2228870/151‑1 (MQ=255) gCTGTGCCAGCTTGAGTGCGTGCGCGCGGGCAATAGCCGCTTCGACTGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCtt < 1:1206389/150‑1 (MQ=17) tGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCGGCTGTGCGCGGATCTCCCGGGGCTTCAGGATCGCCATTAGCCTGTTGCTGTTGCAGGTTGCGAGCTTTGGCTCGGGGCGTCGCGGCTTCGAGggcggcggtgg > 3:1443551/1‑146 (MQ=2) gTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGCAGGCGCAGTTGGGGGGAGGCCACTCTGCTTATGGGTGCGCATTAGCCGGTTGCTGTTGCAGATTGCGCGCGTTGGCGCGGGGAATGGCGGGTTcggcggcggggggggg > 5:1371679/1‑144 (MQ=2) tCCCGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTgcgc < 3:1504250/150‑1 (MQ=255) tCCAGCTTGCGTGCTTTGGCGCGGGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTgcgc < 7:1619422/150‑1 (MQ=255) ccAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATGAACCTCTTCTTCTGGCTCCGCATTAGCCTCATGCTGTTCCAGCTTGCGAGCGTTGGGTCGGGCAATAGAGGCTTCGACGGCGGCTTTGCGCgg > 3:1848570/1‑151 (MQ=14) ccAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCgg > 8:1285578/1‑151 (MQ=255) cgcttgctggcctgcgcgcGGGCAATAGCCGCTGCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGGTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGAt < 7:1434480/136‑1 (MQ=14) aGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGAGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGAt > 7:133180/1‑151 (MQ=255) gcttgcttGCGTTCGCGCGTGCAATAGCCGCTGCTACTGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCGCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATc < 2:932719/151‑1 (MQ=17) gtttctggccttcgcgcGGGCAATAGCCGCGGCCACTGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCGCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCg < 2:1028275/138‑1 (MQ=14) cccgcgcgcgtgcgcgcGGGCAATAGCCGCTTCGACTGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCg < 1:1007983/138‑1 (MQ=17) agggcctgagcgcGTGCAATAGCCGCGGCCACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCTGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGAcc < 2:1214155/141‑1 (MQ=17) ggCTTTTGCGCGTGCAATAGCCGCGTCGACTGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCtgt < 8:596395/150‑1 (MQ=255) gcgtgtgcgcGTGCAATAGCCGCGTCTACTGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCTGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCtgtt < 1:825417/145‑1 (MQ=17) gCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACGAGTAATTCAGGCTGCGAATTAGACAGTTGCTTTTCCAGTTTGCGACGTTTTGCTCGCGCAATAAATTATTAGACGGCGGCTTTGCGCGGATCgggggggt > 4:261248/1‑144 (MQ=9) gttcgcgcGTGCAATAGCCTCTGCCACTGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCTGTTGCTGTTCCCGTTTGCGGGCTTTGGCGCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCtgttgt < 2:1705151/147‑1 (MQ=14) ttGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCtgttgt < 2:395239/150‑1 (MQ=255) tGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGGTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTgttgtt < 1:729354/150‑1 (MQ=255) ggccgcccgcccgcgCCGCTTCCCCGCCCGCTTGGCGCGGAGCCACCTGTTCTTCTGGCACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGGGCTTTGGCTCGTGCAATAGCCGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTc < 5:712410/137‑1 (MQ=11) ggcgTGCAATAGCCTCTTCGACTGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGATCTGCATTAGCCTGTTGCTGTTCGCGTTTGCTGGCTTTTGCTCGGGCAATAGCGGCTTCGACTGCGGCTTTGCGCGGATCGACCTGTTGTTCTgg < 8:1975933/150‑1 (MQ=14) cgggccaTAGCCGCTGCGACTGCCGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCTGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCt < 8:178394/145‑1 (MQ=14) gTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTc < 3:360272/151‑1 (MQ=255) ggCAATCGCCGCTGCAACTGCCGCTGTGCGCGGAGCCACCTGTTCTTCTGGCTCCGCATGAGCCTGGTGCTGTTCCCGTTTGCGGGCCTTGGCGCGGGCAATAGCGGCTTCGACTGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCg < 3:1227859/150‑1 (MQ=14) ggCAATAGCCGCTTCTACTGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCGTCATTAGCGTGCTGATGTTCCCGTTTGCGATCTTTCGCTCGGGCAATAGCGGCTTCGACTGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCg < 1:1445544/150‑1 (MQ=14) ggCAATAGCCGCGGCTACTGCAGCTTTGCGCGGATCAACCTGTTCATCTGGCTCCGCATTAGCCTGTTGCTGTTCCCGTTTGCGGGCTTTGGCGCGGGCAATAGCGGCTTCGACGGCCGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCg < 8:2158466/150‑1 (MQ=14) gCAATAGCCTCTTCAACGGCAGCTTTGCGCTGAGCAACCTGTTCTTCTGGCTCCTCATTAGCCGGCTGCTGTTCCCGTTTGCGCGCTTTGGCGCGGGCAATAGCGGCTTCTACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCgg < 7:1857846/151‑1 (MQ=17) aTAGCCGCGGCAACTGCAGCTTTGCGCGTAGCCACCTCTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTGCGCGTTTGCGCGCTTTGGCGCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCAt < 1:1524442/151‑1 (MQ=17) tatgcggttCGACGTCTGCTTTGCGCGGATGAACCTGTTATTCTGGTTCCGCATTAGCCGGTTGCTGTTCCGGTTTGCGGGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCAt < 1:1671364/143‑1 (MQ=14) atccGATTCGTCGGCTGCTTTGCGCTGATCATCTTGTTCTTCTGGTTCCGCATTAGCCGGTTGCTGTTCCAGCTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCTGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTa < 4:1039360/149‑1 (MQ=11) agcctcggccactgCAGCTTTGCGAGGATCAACCTGTTCTTCTTGCTCCTCATTAGCCTGTTGCTTTTCCCGTTTTAGGGCTTTTGCGCGTGCAATAGCGGCGTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTa < 4:120548/138‑1 (MQ=14) aGCCGCTGCTACGGCAGCTTTGCGCGGATCATCCTGTTCTTCTGGCTCGGCATTATCCTGGTGCTGTTCCCGTTTGCGCGCTTTTGCGCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTa < 4:2146057/151‑1 (MQ=14) ccgcgtcctctgCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCTGTTGCTGGTCCCGTTTGCGGGCTTTGGCGCGGGCAATAGCGGCTTCGACGGCCGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGc < 4:1702808/140‑1 (MQ=14) gcgtccaCGGCAGCTGTGCGCGGAGCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCt < 5:912791/145‑1 (MQ=255) gCTTCTACTGCCGCTTTGCGCTGATCATCCTGTTCTTCTGGCTCCTCATTAGCCTTTTGCTGTTCGCGTTTGCGGGCTTTGGCTCGGGCAATAGCGGCTTCTACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCt < 4:480032/151‑1 (MQ=14) cTTCGACGGCAGCTTTGCGCGGATCAACCTGTAGATCTGAATACCCAATAGCAGGTAGATATTCCCGTATCCGCGCTATGTCTCGGGCAAAAGCGGCTAATAAAACGAAATTGCGCGGATCGACCTGGTGTTCGGGCGCgggaggggccgg > 8:1107795/1‑141 (MQ=255) ggcGACTGCAGCTTTGCGGTGAGCCACCTGTTCTTCTGGCTCCGCATTAGCCTGTTGCTGTTCCCGTTTGCGGGCTTTGGCGCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGt < 1:2149067/149‑1 (MQ=14) tCGACGGCAGCTTTGCGCGGATCCACCTGTTCTTCTGGGTCCGCATTAGCCTGATCGTGTTACAGCTTGCGACAGTTGTCGCGGGCAAAAGCGGCTTCGACGGCGGCGTTGCGCGGATCGACCAGTTGTTCTGGGTCGGCCTTGGGCTGtg > 7:809050/1‑150 (MQ=255) gctactgCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCTGTTGCTGGTCCCGTTTGCGCGCTTTGGCGCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGtt < 8:2116352/145‑1 (MQ=255) gcgcccgCAGCTGTGCGCGGATCAACCTGTTGTTCTGGATCCGCATTAGCCGGTTGCTGATCCCGATTGCGGTCTTTGGCTCGGTCATTAGCGGCTTCGAGGTCCGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTg < 5:141575/143‑1 (MQ=14) gACGGCAGCTTTGCGCGTATCAACCTGTTCTTCTGGCTCCGCATTAGCCTTGTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGc < 3:676644/151‑1 (MQ=255) actgccgCTTTGGGCGTATCTACGTGTTCTTCTTGCTCCGTATTAGCCTGTTGCTGTTCGCGTTTGCGGGCTTTTGCGCGGGCAATAGCGGCTTCTACTGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCt < 6:1638049/145‑1 (MQ=14) cGGCAGCTTTGCGCGGAGCAACCTGTTCTTCTGGCTCCGCATTAGCCGGGTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTg < 3:1103696/151‑1 (MQ=255) cAGCTTTGCGCGGAGCCACCTGTTCTTCTGGCTCCGCATTAGCCTGTTGCTGTTCCCGTTTGCGCGCTTTTGCGCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTc < 3:1698063/151‑1 (MQ=255) aGCTCTGCCCCGATCAACCTGTTCTTCTGGCTCCTCATTATCCTGTTGCTGTTCCAGCTTGCGCTCTTTGGCTCGTGCAATAGCTGCTTCGAAGGCGGCTTTGCGCTGATCTACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTcc < 8:803245/151‑1 (MQ=11) tgcgctttgcAACCTGTTCTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCCGTTTGCTGGCTTTGGCGCGGGCAATAGCGGCGTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCt < 2:605446/141‑1 (MQ=14) tgagcgGATCTATCTGTTCTCCTGGCTCTTCATTAGTCTTGTGCTGTTCGGGTTTGTTGGCGTTAGCGCGGGCAATAGCCGCTTCTACTGCGGCTTTGCGCGGATCTACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCt < 6:424610/147‑1 (MQ=2) ccgctcccccgcttcctcTGGCCCCGCATTATTTTTTTTATGTTCCCGCTTGCGAGCTTTTGCTCGCGATTTATCGTCTTGGTTTGCGTCTTTGAGGGGATTGAGATGTTCTTCTGGCTCCGCATTAGCCTGTTGCTGTTCCAGCTTGCgc < 8:156787/139‑2 (MQ=0) agcacgcTGGTCTTCGGGCGGCGCATTAGCCTTCTGCTGGGCGGGTTTTCGGGCGTTGGCTCGGGCAATAGCGGCTTCTACTGCCGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCt < 3:2259297/145‑1 (MQ=14) cTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGGTTGCGCGCTTTGGCACGGGCAATAGCGGCTTc > 4:1924290/1‑72 (MQ=255) ggtgttctGCCTCCTCTTTACCCTGGTGCTGTGCGCGTTTGCTGGCGTTCGCTCGGGCAATAGCCGCTTCTACGGCCGCTTTGCGCGGATCTACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCa < 1:544572/145‑1 (MQ=14) ttcttcTGGCTCCGCAGTCCCCGGTAGCTCTTCCATTTTCCGCTCTTTGTCGAGGTCTCTAGCGGCTTCTACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACg < 6:1921351/150‑1 (MQ=14) ttagggctcggtttgaGCCTGTTGCTGGGCCGGTTTGGTGGCGGTGGCGCGGGCAATAGCGGCGTCTACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGc < 4:809466/135‑1 (MQ=11) tctGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATACGGTCTTAGCCGGCCCCGTATCGCGGCGCGTCCGGTAGTGGTGGCTCGGCATTAGGCTTTTGCTGGTAAAGATTGCGTGCGTTGgggcgggcgg > 7:1499337/1‑149 (MQ=255) ggcctcgggaatAGCCTGCTGCTGGTCCCCTTTGCTGGCGTTGGCGCGGGCAATAGCCGCTGCCACGGCCGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATa < 1:646670/140‑1 (MQ=14) ggCTCGGCATTAGCCTGTTGCTGTTCGGGTTTGCGCGCTTTGGCGCGGGCAATAGCGGCTTCGACTGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATa < 8:845420/150‑1 (MQ=14) gccGCATTTGCCGGCTTCTGCTCCGGTGTGCGGTCGTTGGCGCGGGCAATAGCGGCTTCGACGGCTGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCgg < 2:742380/150‑1 (MQ=14) cgcccttcggcGGTTGCTGGTCGGGTTTGCTGGCTTTTGCGCGGGCAATAGCGGCTGCTACTGCGGCTTTGCGCGGATCTACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCg < 6:1388946/139‑1 (MQ=14) ccGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCGCGGGc > 1:405306/1‑46 (MQ=255) cGCAGTAGCCGGGGGCGGTTCCCGTTTTCTTCCTTTGGCTCGGGCAATAGCCGCTTCGACTGCGTCTTTGCTCGTATCTAGGTTTCTTTCTGGCTCTGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCt < 5:350182/151‑1 (MQ=9) gCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGTCTTATCAGGCGGCTTAGCCCGTCGAGACCGGAAGTGCTGGCTCGGAATTAGGCTGTTGCTGTTAAATATTGCGGGCTTTGGCGCGGGcggtaggggggg > 7:1958040/1‑140 (MQ=255) atcacccGGCTGCTGGGCGCGTTTGCGCGCGTGGGCGCGGGCAATAGCGGCTTCCACTGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCTTCg < 3:287811/146‑1 (MQ=14) aGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGCCAATAGCGCCTTCGACGGCGGCTTTGCGCGGATCCACCTGTTGTTCTGGGTCGGCATTAGCCTGTTGCAGTTCTAGCTTGCGTCCTTGTGAACGCGCCTTAGGGGCTTGGAcg > 3:791214/1‑151 (MQ=14) gcctgctGCTGGTCGGGTTTGTTCGCGTTAGCGCGGGCAATAGCGGCTTCTACTGCGGCTTTGCGCGGATCTACCTGTTCTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCTTCGAcgg < 7:2283058/145‑1 (MQ=11) ccctggtGCTGTTCGGGTTTGCGCGCGTGGGCGCGGGCAATAGCGGCGTCGACGGCCGCTTTGCGCGGATCGACCTGTTCTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCTTCGAcgg < 1:2280216/145‑1 (MQ=11) tcttgagaggTTCCCGATGGAGAGCTTTTGCTGGGTCTATAGTGTTTGCGTCGTCGTCTTTGTTCGGATCTACCTGTTCTTCTGGCTCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCGCGGGCGATAGCTGCTTCAAcgg < 6:1049270/141‑1 (MQ=2) ccGGGTGCTGGTCCCGGTTGCGCGCTTTCGCTCGGGCAATAGCCGCGTCGACGGCCGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCTTCGAcggc < 5:514894/151‑1 (MQ=14) catgTTGCTGGTCCCGTTTGCTCGCGTTGGCGCGGGCAATAGCGGCTGCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCTTCGAcggc < 3:605128/148‑1 (MQ=14) cTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGTTCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTGGGGAGCGGGCAAGTGTGGCGTCGAGTGCGGCTTTg > 5:454236/1‑151 (MQ=11) cTGTTCCCGCTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTgg < 3:518121/78‑1 (MQ=18) gcgggTTTGAGGGCGTTCGCGCGGGCAATAGCCGCTTCTACGGCCGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTgcgc < 2:2048762/146‑1 (MQ=14) cgagTTTGCTGGCGTTCGCGCGTGCAATAGCCGCTGCTACTGCCGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGCTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCgg < 7:2095777/148‑1 (MQ=17) cccGTTTGCGCGCTTTGGCTCGGGCAATAGCTGCTTCGACGGCGGGTTTGCGGGGATCGGCAACTTGTGCTGGGTGCGCATTAGCCTCTTGCTGATCACGCGTGCGGCCTTGGGCTCGGGGTATAGCTGGTGCGCCGGCAGATTTACGCgg > 7:953992/1‑151 (MQ=255) gttgatcgcCTTCGCGCGGGCAATAGCGGCGGCAACTGCGGCTTTGCGCGGATCTACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCg < 3:2012898/145‑1 (MQ=14) ttGCTCGCCTTAGCTCGGGCAATAGCCGCGTCTACTGCTGCTTTGCGCGGATCTACCTGTTGTTCTGGCTCGTCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTTGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCg < 2:1288724/150‑1 (MQ=14) tGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGATCCTATGCGCGGAGCTCCCAGGTCGTCTGGCTAAGAAGTAGCGTGTTGCTGTTCCAGCTTGAGAGCTATTGCACGGGCGAGAGCGGCTTCGACGGCGGGGTTGCGCggcgggcg > 5:1864534/1‑145 (MQ=2) | GGATCAACCTGTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGT > DH1/2169419‑2169718 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |