Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*DH12,169,5770TG28.6% 361.9 / 83.5 344R661R (CGA→CGC) rsxCelectron transporter RsxC
Reads supporting (aligned to +/- strand):  ref base T (49/188);  new base G (9/86);  total (70/274)
Fisher's exact test for biased strand distribution p-value = 1.61e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 348 total aligned reads displayed.

GTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAAT‑AGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTCTTCT  >  DH1/2169429‑2169724
                                                                                                                                                    |                                                                                                                                                    
     tctGGTACCGGATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACTGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCggg                                                                                                                                                  <  5:1131200/148‑1 (MQ=255)
     tctGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCa                                                                                                                                                <  7:746525/150‑1 (MQ=255)
        ggTACCGCATTAGCCTGTTGCTGTTCGAGCTTTCGTGCTTTTGCGCGTGCAATAGCCGCTTCTACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAAt                                                                                                                                              <  8:746110/149‑1 (MQ=255)
        ggTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAAT‑a                                                                                                                                            <  1:1594169/150‑1 (MQ=255)
         gTACCGCAGTAGCCTGGTGCTGTTCCAGCTTGCGTGCGTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAAT‑AGc                                                                                                                                          <  7:1450390/151‑1 (MQ=255)
          tACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCCCTTCGACGGCCGCTTTGCGCGGATCTACCTGTTCTTCTGCCTCCGGATTAGCAGTATTCTGATCGCGTTTGCGCGCTTAGGATCGGGCAAT‑ACCg                                                                                                                                         >  3:1129700/1‑151 (MQ=17)
           aCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAAT‑AGCg                                                                                                                                         <  8:487205/150‑1 (MQ=255)
             cGCATTAGCCTGGTGCTGTTCCAGCTTGCGTGCGTGGGCGCGTGCAATAGCCGCTGCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAAT‑AGCGGCt                                                                                                                                      <  1:199351/151‑1 (MQ=255)
               ccttACCCTGGTGCTGTGCGAGCTTGTGTGCTTGTGCGCGTGCAATAGCCGCTTCTACTGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGGTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAAT‑AGCGGCTTc                                                                                                                                    <  6:4605/149‑1 (MQ=18)
                aTTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCCGATGCTCTTACCCTTAGCCAGCTATGGCTCCGGCAAT‑AGCGGCTTCg                                                                                                                                   >  7:816712/1‑151 (MQ=17)
                  tatccTGGTGCTGTTCCAGCTTGCGTGCTTTGGCGCGGGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAAT‑AGCGGCTTCGa                                                                                                                                  <  4:179765/147‑1 (MQ=255)
                   aggcTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGGATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAAT‑AGCGGCTTCGAcg                                                                                                                                <  6:1038746/148‑1 (MQ=255)
                   aGCCTGTTGCTGTTCGAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAAT‑AGCGGCTTCGAcg                                                                                                                                <  3:109823/151‑1 (MQ=255)
                   aGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAAT‑AGCGGCTTCGAc                                                                                                                                 <  4:2262241/150‑1 (MQ=255)
                       tGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGAAGCGCGGATTACGCTCATCTAGCTGAACATATTGTTCGGCATTAGACAGATCCTGTGGCCCCTTGAGAGATTAAGAACGGGCAAT‑AGCGGCTTCGAcggggg                                                                                                                            >  2:1243925/1‑151 (MQ=2)
                        gTTGCTGTTCCCGCTTGCGTGCGTTGGCGCGGGCAATAGCCGCGTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAAT‑AGCGGCTTCGAcggcg                                                                                                                             <  6:2135768/149‑1 (MQ=255)
                        gTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAAT‑AGCGGCTTCGAcggcgg                                                                                                                            <  3:563006/150‑1 (MQ=255)
                        gTTGCTGTTCCAGCTTGAGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAAT‑AGCGGCTTCGAcggcgg                                                                                                                            <  7:268439/150‑1 (MQ=255)
                        ctttcTGTTCCAGATTGCCTGCCTTGCCGCGTGCAATAGCCGCGTCTACTGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAAT‑AGCGGCTTCGAcggcg                                                                                                                             <  2:534305/145‑1 (MQ=17)
                          tGCTGTTCGAGCTTGCGTGCTTTTGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCTGATCAACGTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAAT‑AGCGGCTTCGACGGCGGCt                                                                                                                          <  2:1587926/150‑1 (MQ=255)
                           gcgggtcctccTTGCGGGCGTGCGCGCGTGCAATAGCCGCGTCTACTGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAAT‑AGCGGCTTCGACGGCGGCttt                                                                                                                        <  3:1571785/141‑1 (MQ=17)
                           gCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGATCCGCATTAGCCTGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAAT‑AGCGGCTTCGACGGCGGCttt                                                                                                                        >  7:902935/1‑151 (MQ=255)
                           gCTGTGCCAGCTTGAGTGCGTGCGCGCGGGCAATAGCCGCTTCGACTGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAAT‑AGCGGCTTCGACGGCGGCtt                                                                                                                         <  1:1206389/150‑1 (MQ=17)
                           gCTGGTCCAGGGTGCGGGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTGTGCGCGGATCAACCTGTTCTTCTGGCTCCGGATTAGCCGGTTGCTGTTCCCGGTTGCGGGCTTTGGCGCGGGCAAT‑AGCGGCTTCGACGGCGGCtt                                                                                                                         <  1:705395/150‑1 (MQ=17)
                              gtgccAGCTTGCGTGCTTTCGCGCGTGCAATAGCCGCTTCCACTGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAAT‑AGCGGCTTCGACGGCGGCTTTg                                                                                                                       <  4:1083631/146‑1 (MQ=255)
                                  cAGCTTGCGGGCTTTCGCGCGGGCAATAGCCGCGTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAAT‑AGCGGCTTCGACGGCGGCTTTGCGCGGa                                                                                                                 <  7:1764649/151‑1 (MQ=255)
                                   cgCTTGCGGGCGTTCGCGCGGGCAATAGCCGCGTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCGCGGGCAAT‑AGCGGCTTCGACGGCGGCTTTGCGCGGAt                                                                                                                <  5:611977/150‑1 (MQ=14)
                                    gCTTGCTGGCGTGGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAAT‑AGCGGCTTCGACGGCGGCTTTGCGCGGATc                                                                                                               <  1:834083/151‑1 (MQ=255)
                                     cccgcgcgcgtgcgcgcGGGCAATAGCCGCTTCGACTGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAAT‑AGCGGCTTCGACGGCGGCTTTGCGCGGATCg                                                                                                              <  1:1007983/138‑1 (MQ=17)
                                       tGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAAT‑AGCGGCTTCGACGGCGGCTTTGCGCGGATCGa                                                                                                             <  5:509999/150‑1 (MQ=255)
                                         gtggcctgcgcgcGTGCAATAGCCGCGTCTACGGCCGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCTGCTTGCGTGCTTTGGCTCGGGCAAT‑AGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCt                                                                                                          <  2:1454851/142‑1 (MQ=11)
                                          gTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCTGTTGATGTTCCAGATTGCGAGCTTTGGCACGGACAAA‑AGATGCTACTACTGCTGCTTTACGCTGAtatacc                                                                                                           >  8:1254661/1‑144 (MQ=17)
                                           ggcctttgcgcGGGCAATCGCCGCTGCTACTGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTCGCTCGGGCAAT‑AGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCtgt                                                                                                        <  8:1948814/144‑1 (MQ=17)
                                           ggcctttgcgcGGGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCGCGGGCAAT‑AGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCtgt                                                                                                        <  6:975351/144‑1 (MQ=255)
                                               ttGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAAT‑AGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCtgttgt                                                                                                     <  2:395239/150‑1 (MQ=255)
                                               ttGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCAGATTGCGAGCTTTGGCTCGGGCAAT‑AGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTgttgtt                                                                                                    >  8:1292821/1‑151 (MQ=255)
                                               ttGGCGCGTGCAATAGCCGCTTAGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGGTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAAT‑AGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCtgttg                                                                                                      <  7:1404738/149‑1 (MQ=255)
                                               tgggCGCGGGCAATAGCCGCTGCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGGTGCTGTTCCCGGTTGCGCGCTTTGGCTCGGGCAAT‑AGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCtgttg                                                                                                      <  5:412473/147‑1 (MQ=255)
                                                tGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGATTGCGAGCTTTGGCTCGGGCAAT‑AGCGGCTTCGCCGGCGGCTGTGGGCGGATCGCCCGGGTGTTc                                                                                                   >  1:742595/1‑151 (MQ=21)
                                                 ggCGCGGGCAATAGCCGCGTCGACGGCAGCTTTGCGCGGAGCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAAT‑AGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCt                                                                                                  <  8:54210/151‑1 (MQ=255)
                                                   cgcgTGCAATAGCCGCGTCGACTGCAGCTTTGAGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCTGTTGCTGTTCCCGTTTGCGCGCTTTGGCGCGGGCAAT‑AGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTgg                                                                                                <  2:228143/151‑1 (MQ=255)
                                                    gcgTGCAATAGCCGCTTCGACGGCGGCTTTGCGCGGATCACCCTGTTCTTCTGGATACGCGTTAGCCGGTTGCTGTTCCCGTTTGCGGGCTTTGGCACGGGCAAT‑AGCGGCTTCGACGGCGGCGTTGGGCGGAGCGcccgggtgggctggg                                                                                               >  5:2140909/1‑139 (MQ=14)
                                                      gTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAAT‑AGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTc                                                                                             <  3:360272/151‑1 (MQ=255)
                                                       ggCAATAGCCGCTTCTACTGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCGTCATTAGCGTGCTGATGTTCCCGTTTGCGATCTTTCGCTCGGGCAAT‑AGCGGCTTCGACTGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCg                                                                                            <  1:1445544/150‑1 (MQ=14)
                                                         caagacccccctccaCGGCAGCGTTGCGCGGATCAACCTGTTCTTCTCGCACCGCATTAGCCTGTTGCTTTTCCCGGTTTCGAGCTTTGGCGCGTGCAAT‑AGCGTCGTCGACTGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGc                                                                                          <  3:135140/137‑1 (MQ=14)
                                                            tatgcggttCGACGTCTGCTTTGCGCGGATGAACCTGTTATTCTGGTTCCGCATTAGCCGGTTGCTGTTCCGGTTTGCGGGCTTTGGCTCGGGCAAT‑AGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCAt                                                                                        <  1:1671364/143‑1 (MQ=14)
                                                             agcctcggccactgCAGCTTTGCGAGGATCAACCTGTTCTTCTTGCTCCTCATTAGCCTGTTGCTTTTCCCGTTTTAGGGCTTTTGCGCGTGCAAT‑AGCGGCGTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTa                                                                                      <  4:120548/138‑1 (MQ=14)
                                                             aGCCGCTTCGACTGCAGCTTTGCGCGGATCAACCTGTTCTTCTTGCTCCGCATTAGCCTGTTGCTGTTCGCGTTTGCTGGCTTTGGCTCGGGCAAT‑AGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCAtt                                                                                       <  2:1082385/150‑1 (MQ=17)
                                                             aGCCGCTGCTACGGCAGCTTTGCGCGGATCATCCTGTTCTTCTGGCTCGGCATTATCCTGGTGCTGTTCCCGTTTGCGCGCTTTTGCGCGGGCAAT‑AGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTa                                                                                      <  4:2146057/151‑1 (MQ=14)
                                                              gCCGCTTCCACTGCAGCTTTGCGCGGAGCAACCTGTTCTTCTGGCTCCGCATTAGCCTGTTGCTGTTCGCGTTTGCGGGCTTTGGCGCGGGCAAT‑AGCGGCTTCTACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTa                                                                                      <  2:1971227/150‑1 (MQ=14)
                                                                ggCTTCGAGGGCAGCTTTGCGCGGATCTACCTGTTCTTCTGGCTCCGTATTAGCCGGTTGCTGTTCCAGTTTGCGGGCTTTGGCTCGGGCAAT‑AGCGGCTTCGACGGCTGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGcc                                                                                   <  8:816227/150‑1 (MQ=14)
                                                                cGCTGCTACGGCAGCTTTGCGCGGATCAACCTGCTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGGGCTTTGGCTCGGGCAAT‑AGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGcc                                                                                   <  7:403518/151‑1 (MQ=255)
                                                                  gttCTACGGGAGCTTTCGTAGGAGCAACGTGTTCTTCTGGCTCCGCATTAGCCTGTTGCTGTTCGCGTTTGCGGGCTTTGGCGCGGGCAAT‑AGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTg                                                                                 <  6:290040/150‑1 (MQ=14)
                                                                  cTTCGACGGCAGCTTTGCGCGGATCAACCTGTAGATCTGAATACCCAATAGCAGGTAGATATTCCCGTATCCGCGCTATGTCTCGGGCAAA‑AGCGGCTAATAAAACGAAATTGCGCGGATCGACCTGGTGTTCGGGCGCgggaggggccgg                                                                                 >  8:1107795/1‑141 (MQ=255)
                                                                   ggcGACTGCAGCTTTGCGGTGAGCCACCTGTTCTTCTGGCTCCGCATTAGCCTGTTGCTGTTCCCGTTTGCGGGCTTTGGCGCGGGCAAT‑AGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGt                                                                                <  1:2149067/149‑1 (MQ=14)
                                                                    gctactgCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCTGTTGCTGGTCCCGTTTGCGCGCTTTGGCGCGGGCAAT‑AGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGtt                                                                               <  8:2116352/145‑1 (MQ=255)
                                                                    gcgcccgCAGCTGTGCGCGGATCAACCTGTTGTTCTGGATCCGCATTAGCCGGTTGCTGATCCCGATTGCGGTCTTTGGCTCGGTCATT‑AGCGGCTTCGAGGTCCGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTg                                                                                 <  5:141575/143‑1 (MQ=14)
                                                                     cGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAAT‑AGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTg                                                                              <  7:1286472/151‑1 (MQ=255)
                                                                      gACTGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCTGGTGTTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAAT‑AGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGc                                                                             <  3:1499678/151‑1 (MQ=255)
                                                                       actgccgCTTTGGGCGTATCTACGTGTTCTTCTTGCTCCGTATTAGCCTGTTGCTGTTCGCGTTTGCGGGCTTTTGCGCGGGCAAT‑AGCGGCTTCTACTGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCt                                                                            <  6:1638049/145‑1 (MQ=14)
                                                                       aCGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGGTTGCGAGCTTTGGCACGGGCAAT‑AGAGACATCGACTCAGGAGTGGCGCGGATAGAACTGTTGTTCTGGCTCGGCATTAGCCTGATga                                                                             >  5:1922272/1‑149 (MQ=18)
                                                                           cAGCTTTGCGCGGAGCCACCTGTTCTTCTGGCTCCGCATTAGCCTGTTGCTGTTCCCGTTTGCGCGCTTTTGCGCGGGCAAT‑AGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTc                                                                        <  3:1698063/151‑1 (MQ=255)
                                                                            cgCTTTGCGCGGAGCAACCTGGTCTTCTGGCTCCGCATTATCCTGTTGCTGTTCCCGTTTGCTGGCTTTCGCGCGGGCAAT‑AGCGGCTTCTACTGCCGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTcc                                                                       <  6:1343250/150‑1 (MQ=14)
                                                                                ttGCTCGGATGAACCTGTTCTTCTCGACCCGCATTAGCCGGTTTCTGTTCCAGGTTGCTCTTGTTTTCTCGGGCAAT‑AGCCGCTTCTACTGCCGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGc                                                                    <  2:2186693/150‑1 (MQ=14)
                                                                                  ccgctgattcaCCTGTTATTCGTGCTCCGCTATAGCCTGTTGCTGGTCCGGTTTGCGGGCTTTTGCGCGGGCAAT‑AGCGGCTTCGACTGCCGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCtt                                                                  <  4:1534352/140‑1 (MQ=11)
                                                                                     cgtaTCACCCTGTGCTTCGAGCTCGTCTTTACCCTGCTGCTGTGCCCGTTTGTGCGCCTTTGCGCGGGCAAT‑AGCGGCTGCTACTGCCGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGt                                                              <  6:686045/148‑1 (MQ=9)
                                                                                         gctaCCTGGTCTTCTGGCGGCGCATCATCCGCTGTCTGTGCGCGTTTGCTGGCCTGCGCGCGGGCAAT‑AGCCGCGTCTACTGCGGCTTTGCGCGGATCTACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCtt                                                          <  5:168098/148‑1 (MQ=2)
                                                                                              cTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGGTTGCGCGCTTTGGCACGGGCAAT‑AGCGGCTTc                                                                                                                                    >  4:1924290/1‑72 (MQ=255)
                                                                                               cgctctgcgggCCCCGCATTAGCCGGTTGCTTTTCCCGTTCGCGCGCTTTGGCTCGGGCTAC‑TGCGGCTTCTCCGGAGGGTTTCCGCGGCGCGACCTGATGTTCTGGGTCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCAc                                                    <  5:829742/142‑1 (MQ=14)
                                                                                                 ttcttcTGGCTCCGCAGTCCCCGGTAGCTCTTCCATTTTCCGCTCTTTGTCGAGGTCTCT‑AGCGGCTTCTACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACg                                                   <  6:1921351/150‑1 (MQ=14)
                                                                                                  tcttctGGTTTTTCATTAGCCTGTTGCTTTTCCCGTTTGCTAGATTTGGGTCGTGAAAT‑ATTCGCTTCTAGTGGCGCTTTGGTTGTATCTACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACgg                                                  <  4:334414/150‑1 (MQ=9)
                                                                                                  tcttctGGCTCCGCATTAGCCGGTTGCTGTTCCAGGTTGCGCGGATTGGAACCGCCAAG‑ATCTGATAGGCAGTCGCGAATTCGGGGATCGTAGTGGTGTTCTGGCTGGGCATTAGACTGTTGCTGTTCCAGGTTGCgggggtgggcagggg                                                 >  7:156984/1‑137 (MQ=255)
                                                                                                   tttatgcctcgttaTTAGCCTGTTGCTGTTCGGGTTTTTTGGCTTGCGCGCGGGCAAT‑AGCGGCGTCTACGGCGGCTTTGCGCGGATCTACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACggg                                                 <  6:1149214/137‑1 (MQ=14)
                                                                                                    ttagggctcggtttgaGCCTGTTGCTGGGCCGGTTTGGTGGCGGTGGCGCGGGCAAT‑AGCGGCGTCTACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGc                                                <  4:809466/135‑1 (MQ=11)
                                                                                                     tctGGCTCCGCAAGAGCCTGGTGCTGTGCCCGTTTTCTCGCGTTCGCTCGGGCAAT‑AGCGGCGTCCACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGc                                                <  7:2058729/149‑1 (MQ=14)
                                                                                                      ctGGCTCCGCATTAGCCGGTTGCTGTTCCAGATTGCGCACATAGGAACAGCCAAT‑AGATGCTAAAACGTCGGATTTGCGCTGATCGACAAGTTGTTCTCGGTAGGAATTAAAAAATTGCTGTTCCAGCTTGCGGGGTTGGGCAgggggtcg                                             >  8:2210296/1‑147 (MQ=255)
                                                                                                        ggCTCGGCATTAGCCTGTTGCTGTTCGGGTTTGCGCGCTTTGGCGCGGGCAAT‑AGCGGCTTCGACTGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATa                                            <  8:845420/150‑1 (MQ=14)
                                                                                                              ccATTAGACTTTTTCTGTTCCCTAGTGAGTGCTTTGGTTCTGGAATT‑TGTTGCTTTGTCTGCGGCTTTGCGCGGATCTACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCtt                                     <  4:494296/150‑1 (MQ=9)
                                                                                                               cagtAGCCTGTTGCTGTTCCAGCGTGCGGGCGGTGGCGCCGGCAAT‑AGCTGCTGCGACGTCTGCTTTGCGCGGATCTACCTTTTGTTCTGGCACGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCTTc                                    <  1:2294156/148‑1 (MQ=11)
                                                                                                               cATTAGCCGGTGGCTGCTGCCGATTGAGGGATTGGGGTCTGGCCTTCCGCGG‑TGCGACGTCCGCTTTGCGCGGATCAACCTGTTGTTCTGGCTCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCtt                                     <  7:2148136/150‑1 (MQ=2)
                                                                                                                atcacccGGCTGCTGGGCGCGTTTGCGCGCGTGGGCGCGGGCAAT‑AGCGGCTTCCACTGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCTTCg                                   <  3:287811/146‑1 (MQ=14)
                                                                                                                  tagatggTTGCTGTGCCGGTTTTATGGCTTTTGCTCGGGCAAT‑AGCGGCGTCTACTGCGGCTTTGCGCGGATCTACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCTTCGa                                  <  2:767236/145‑1 (MQ=14)
                                                                                                                   acccgctagCTCTTCCCGAGTGCGGGCGATGCCTCGGCCAAT‑CGCCTCTGCCACGGCCGCTTTGCGCGGATCCACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCTTCGAcg                                <  7:1891134/143‑1 (MQ=14)
                                                                                                                   aGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGCCAAT‑AGCGCCTTCGACGGCGGCTTTGCGCGGATCCACCTGTTGTTCTGGGTCGGCATTAGCCTGTTGCAGTTCTAGCTTGCGTCCTTGTGAACGCGCCTTAGGGGCTTGGAcg                                >  3:791214/1‑151 (MQ=14)
                                                                                                                         gtGCTGTTCGCGTTTGCGGGCGTGCGCGCGGGCAAT‑AGCGGCTTCGACTGCGGCTTTGCGCGGATCCACCTGTTCTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCTTCGACGGCGGCt                          <  1:457684/150‑1 (MQ=14)
                                                                                                                            cTGTTCCCGCTTGCGCGCTTTGGCTCGGGCAAT‑AGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTgg                                                                                                <  3:518121/78‑1 (MQ=18)
                                                                                                                              gTTCCCGTTTGCGCGCTTTGGCTCGGGCAAT‑AGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGGTCGGCATTAGACTGTTGCTGTTCCAGCTTGCGGGCGTTGGGACGCGCACTCGGGGGTTCGCCgggggcgtgggg                     >  5:1216421/1‑145 (MQ=14)
                                                                                                                               ttCCCGTTTGCGCGCTTTGGCTCGGGCAAT‑AGCTGCTTCGACGGCGGGTTTGCGAGGATCGCCATGGGGTGCTGGGTCAGAGGTACCCTGTTGCGGGTAGAGCTTGAGTGCTTTGGCGCGGGCCGTAGGGGGGTGGACTGCAGTTTTgcgg                    >  3:1808838/1‑150 (MQ=255)
                                                                                                                                 cccGTTTGCGCGCTTTGGCTCGGGCAAT‑AGCTGCTTCGACGGCGGGTTTGCGGGGATCGGCAACTTGTGCTGGGTGCGCATTAGCCTCTTGCTGATCACGCGTGCGGCCTTGGGCTCGGGGTATAGCTGGTGCGCCGGCAGATTTACGCgg                  >  7:953992/1‑151 (MQ=255)
                                                                                                                                  ccGTTTGCGCGCTTTGGCTCGGGCAAT‑AGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCCCGGGCAATAGCGGCTTCGACGGCCGGTTTGCGAggc                 >  3:724742/1‑150 (MQ=255)
                                                                                                                                   ggTTTTCGCGCATTAGCGCGGGCAAT‑AGCGGCGTCTACGGCCGCTTTGCGCGGATCTACCTGTTGTTCTGGCTCGGCATTAGCCTGGTGCTGTTCCCGCTTGCGTGCTTTGGCACGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGAt                <  1:558078/150‑1 (MQ=14)
                                                                                                                                    ccgcgcgtccgttctcTCGGGCAAT‑AGCGGCTTCTACGGCTTCTTTTCGCGGATCGACCTGTTGTTCTGGTTCCGCATTAGCCTTTTGCTTTTCCAGCTTGCTTGCTTTGTCTCGGGCTATAGCTGCTTCAACGGCAGTTTTACGTGGATc               <  8:1559296/136‑1 (MQ=14)
                                                                                                                                     gttgatcgcCTTCGCGCGGGCAAT‑AGCGGCGGCAACTGCGGCTTTGCGCGGATCTACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCg              <  3:2012898/145‑1 (MQ=14)
                                                                                                                                      ttGCGCGCTTTGGCTCGGGCAAT‑AGCGGCTTCGACGGCGGGTTTGCGGGGGTAGACCAGTGGTGGTGGCTCCACATTAGACTGATTCTGTTCAATCTGGCGTGCTTTTGGAAGGGAAATAGCGGCTTCGCCGGCGGGTTTggggggggcgg             >  3:2141837/1‑141 (MQ=9)
                                                                                                                                      ttGCGCGCTTTGGCTCGGGCAAT‑AGCGGCTTCGACGGCGGCTTTgc                                                                                                                      <  2:1837374/46‑1 (MQ=35)
                                                                                                                                       tgtgggcgtttgCTCGTTCAAT‑AGCCGCGTCAACTGCGGCTTTGCGCGGATCTACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGTTTGCGTGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGa             <  8:2062815/139‑1 (MQ=11)
                                                                                                                                          tggcTTTTGCTCGGGCAAT‑AGCCGCGGCCACTGCCGCTTTGCGCGGATCTACCTGTTCTTCTGGTTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCt          <  8:1685698/148‑1 (MQ=11)
                                                                                                                                             ccttGGCTCGGGCAAT‑AGGGGCGTCTACTGCGGCGTTGCGCGGATCTTCCTGGTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCGAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGttc      <  2:703399/149‑1 (MQ=14)
                                                                                                                                             agtttgCTCGGGGAAT‑AGCCGCTTATACTGCCTGTTTTAGCGGATCTACCTGTTCTTCTGGCTCGGCATTTGCCTGTTGCTGTTCCTGTTTGCGTGCTTTTGCTCGTGCAATAGCGGCTTCTACGGCGGCTTTGCGCGGATCGACCTGtt       <  4:1702191/145‑1 (MQ=2)
                                                                                                                                               ttGGCTCGGGCAAT‑AGCGGCTTCGACGGCGGCTTTGCGCGGATCGCCCTGTTGTTCTGGGTCGGCATTAGACTGTTGCAGTTCAAGCTTGCGGGCTTTGGCTCGGGCAATAGCTGCTTCCACGGCCGGTTTAAGAGGATCGCCCTggggtg    >  7:1971578/1‑146 (MQ=11)
                                                                                                                                                    |                                                                                                                                                    
GTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAAT‑AGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTCTTCT  >  DH1/2169429‑2169724

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑