Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | DH1 | 4,122,124 | 0 | C | A | 27.4% | 414.7 / 35.0 | 338 | intergenic (‑15/+22) | ECDH1_RS20430/ECDH1_RS20435 | tRNA‑Gly/tRNA‑Gly |
Reads supporting (aligned to +/- strand): ref base C (136/60); new base A (72/2); total (272/66) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 7.81e-08 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 343 total aligned reads displayed.
CTACCAACTGAGCTATTCCCGCTTGGGTGGTCTGTGCCTTACAGCACTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTG‑TGCTTTGCAGCACTTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTACTACTTAATTTTGCTTTCGTAATTTTCGCATTTCTGCGTCGTTACGGG > DH1/4121977‑4122272 | ccaCCAACTTCGCTATACCCGCTGGGTGGGTCTGTCCATTTAAGCACTTTCACATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTG‑TGCttt < 8:1973249/149‑1 (MQ=14) acAACTCAGCTTTTCGCTGGTGGTTGGTCTGTTGATTACATCTATTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTG‑TGCTTTgca < 6:1922535/150‑1 (MQ=14) aGCTATTCCCGCTTGGGTGGTCTGTGCCTTACAGCACTTTCAAATTTTGGACCGGGAAACGAGACTCGAACTCGCGACCCCCACCTTGGCAATGTCGTGCTCTACCAAATGAGCAATTACCGCTTGGGACGTCTG‑TTATTTGGAGGAAttt > 6:1571684/1‑151 (MQ=14) tATTCCCGCTTGGGTGGTCTGTGCCTTACAGCACTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCCACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTCGTCTC‑TGCTTTGCAGGACTTTTc > 2:1120444/1‑150 (MQ=255) aatcccggggggggggTCTGGGCATTAAATCCCTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTG‑TGCTTTGCAGCACTTTTc < 1:1072217/139‑1 (MQ=14) aTTCCCGCTTGGGTGGTCTGTGCCTTACAGCACTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTCGGTGGTCTG‑TTATGTGGAGCACTTTTCa > 3:1642493/1‑150 (MQ=14) cccGCTTGGGTGGTCTGTGCCTTACAGCACTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTG‑TGTTTTGGAGCACTTTTCAAAtt > 5:993809/1‑151 (MQ=255) cccGCTTGGGTGGTCTGTGCCTTACAGCACTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGCGTGGTATG‑TTATTTTAAGCACTTTTCAAAtt > 8:86593/1‑151 (MQ=17) cccGCTTGGGTGGTCTGTGCCTTACAGCACTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTGGGTGGTCTG‑TTTTTTGGAGGAATTTTCACAtt > 1:602746/1‑151 (MQ=14) cccGCGTGGGGGGTCTGTGACTTACAGCCCTTTCAAAATTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTG‑TGCTTTGCAGCACTTTTCAAAtt < 1:1496831/151‑1 (MQ=255) gCTTGGGTGGTCTGTGCCTTACAGCACTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTCGGAGGTCTG‑TGATTTGGAGCACTTTTCAAATTTTg > 7:1640622/1‑151 (MQ=255) gCTTGGGTGGTCTGTGCCTTACAGCACTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTGGGTGGTATG‑TGTTGTGCAGGAATTTTCAAAttttt > 1:1217748/1‑150 (MQ=17) gCTTGGGTGGTCTGTGCCTTACAGCACTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGACCTATTCCCGCGTAGGTGGTCTG‑TGTTGTTAAGAAATTTTCAAAttttt > 6:2229571/1‑150 (MQ=14) ttGGGTGGTCTGTGCCTTACAGCACTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTGCAGCGTGGGTGGTCTG‑TGCTGTGGATCCCTTTTCAAATTTTgg > 5:131713/1‑150 (MQ=17) ttGGGTGGTCTGTGCCTTACAGCACTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTGCGCTGGTCTG‑TGCTTTGCAGCACTTTTCAAATTTTgg > 7:540819/1‑150 (MQ=255) tGGGTGGTGTGTGTTTTTTAGGTCTTTCAAATTTGGGTGGGGGAAAGGAGACTGGAAGTCGCGACCCCGAGCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTG‑TGCTTTGCAGCACTTTTCAAATTTTGGa < 8:514089/150‑1 (MQ=14) tGGGTGGTCTGTGCCTTACAGCACTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTT‑TTGTGTTCAGGAATTTTCCAATTTTggcg > 5:1898566/1‑149 (MQ=17) gggtgggtCTGTCCCTTACATCACTTGCACATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTG‑TGCTTTGCAGCACTTTTCAAATTTTgg < 3:1365311/144‑1 (MQ=17) gggTGGTCTGTGCCTTACAGCACTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTG‑TTGTGTGGCGCAATTTTCAAATTTTggcgg > 4:1183437/1‑148 (MQ=17) gggTGGTCTGTGCCTTACAGCACTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTG‑TGGTGTGAAGCACTTTTCGAATTTTGgcgc > 4:779434/1‑151 (MQ=255) gggtgtggcacTTACAGCACTTTCAAAATTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTG‑TGCTTTGCAGCACTTTTCAAATTTTGGAGCggg < 7:247145/141‑1 (MQ=255) tCTGTGCCTTACAGCACTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTGGGTGGTCTG‑TTTGTTGCAGCACTTTTCTAATTTTGGAGCgggta > 3:96897/1‑148 (MQ=17) ttgttcattatatcACTTTCATATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTG‑TGCTTTGCAGCACTTTTCAAATTTTGGAGCGGGaaa < 8:1663871/137‑1 (MQ=14) gtgCCTTACAGCACTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTAGGTGGTAAG‑TTATTTGAAGCAATTTTCAAATTTTTGAGCGGGAAACg > 8:915831/1‑150 (MQ=17) gCCTTACAGCACTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTAAT‑TTATTATCAGAACATTTCAAATATTGAAGCCAGAAACg > 5:1746609/1‑148 (MQ=14) gCCTTACAGCACTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTCCGACTTCTG‑TTATATGAAGAACTTTTCAAATTTTGGAGAGGGAAACg > 2:595707/1‑148 (MQ=17) attacatcttgttaaaaTTTTGGATCCGCAACCGAGCCTGTAACTCCCTACCCCGACCTTTGCAAGGTAGTGCTCTAACAACTGAGCTATACCCGCTTGGGTGGTCTT‑TGCTTTTCATCACTTTTCAAATTTTGGAGCGGGAAACGAGACt < 7:1073305/137‑1 (MQ=9) ttACAGCACTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGCGACGTCTGTTGGATTAC‑GAACTTTTCTAATTTTTGAGCGGGAAACgatcgac > 5:1139807/1‑146 (MQ=14) tACAGCACTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTG‑TTATTTGGAGCACTTTTCAAATTTTGGAGCGGGAACGGAGACTcc > 3:1851561/1‑150 (MQ=255) aCAGCACTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTG‑TGCTTTTCCGCACTTTTCAAATTTTCGAGCAGGACACGACAcgcg > 5:267070/1‑150 (MQ=17) aGCACTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTGGTTGGTCTG‑TGCGTTTGAGGACTTTTCTAATTTTTGCGCGGGAACCgcgcggccaa > 3:847742/1‑141 (MQ=14) cACTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGAGTTATT‑TTGTTTTAAGCAATTTTCAAATTTAGGAGGCGTAAACGAGCCGCGaaaa > 6:44547/1‑148 (MQ=14) cACTTTCAAATTTTGGACCGGGAAACGAGACTCGAACTCGCGACCCCGAACTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTACCGCGTGCGAGGTATG‑TTATATGAAGGACTTTTCAAATTTATGAGAGGTAAACGAGAcaccataa > 8:1220871/1‑143 (MQ=14) aCTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTG‑TGGTTTGCAGCACTTTTCTAATTTTGGAGCGGGAAACGCGCCTCGAACTcc > 7:1306961/1‑150 (MQ=255) aCTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTATG‑TGATTTGCAGCAATTTTCAAATTTTGGAGGGGGAAACGAGCCTCGATCtac > 7:959210/1‑149 (MQ=14) cTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGCGTCGTCTG‑TTATATGGAGCACTTTTCAAATTTTTGAGCGGGAAACGAGACTCGAACTcgc > 8:613057/1‑151 (MQ=14) atataaaaTTTAGTTGCGCGAAACTCGCCTGGTACTCGCGAGCGCCACCTTGGCTATGTCGTTCTATAAAAACTTAGCTTTTCCCTCTTGGGTGGTGTG‑TTCCTTACAGTAC‑TTTAAAATTTTGGAGCGGGAAACGAGACTCGAACTcgcg < 5:810555/146‑1 (MQ=2) tttCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGTTCTG‑TTATGTTACGAAATTTTCAAATTTTTGAGAGGGAACCGGAACTCGAACtaacc > 2:2279656/1‑147 (MQ=11) ttCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTG‑TGCTTTGCAGGACTTTTCACATTTTGGAGCGGGAAACGAGCCTCGAACTcgcg > 1:393181/1‑150 (MQ=255) aaaTTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGTAGGTCAG‑TGATATGAAGCACTTTTCAAATTTTGGAGAGCTAAACGAGACACCAAATAGCGAcac > 2:437452/1‑149 (MQ=14) aaaTTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTGGGTGGTCTG‑TGATTTGGAGGAATTTTCAAATTTTTGAGCGGTAAACGACCCTCCAACTACCGAccc > 5:2178968/1‑151 (MQ=14) aTTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGCGTGGTCTG‑TGATTTGAAGAACTTTTCAAATTTTGGCGAGGTAACCGCGAGTCGATATCGCGACACCg > 6:1250836/1‑151 (MQ=14) ttGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTG‑TTGTGTGGAGGAATTTTCAAATTTTTGAGGGGGAAACGAGACTGGAACTAGCGACACCGAcg > 1:958149/1‑150 (MQ=14) tGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTGGTTGGTATT‑TGAGGTTGAGCAATTTTCAAATTTTTGAGCGGTAAAGGCGCGTCGAACTAGCGAcccctcggt > 1:522449/1‑146 (MQ=11) cgccccaaaGGAGCCTGGACCTCCCGCCCCCTACCTGCGCAAGGGCGAGCCCAACAAACCCAGCTATACCCGCTGGGGTGGGGGG‑TGCTTTTCAGCAGTGTTAAAATTTTGGAGCGGCAAACGAGACTCGAACTCGCGACCCCGACCTTgg < 7:19892/145‑1 (MQ=2) aGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTG‑TGCTTTGCAGGACTTTTCAAATTTTGGAGCGGGAAACGAGCCTCGAACTCGCGACCCCGACCTTgg > 7:658219/1‑151 (MQ=255) gCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTCGTACGTCTG‑TGATATGAAGAACTTTTCAAATTTAGGAGCGGGAAACGAAACTCCAAATAGCGACCCCGACCtacc > 6:700721/1‑147 (MQ=14) cGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTG‑TGCTTTGCAGCACTTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGc > 8:352716/1‑150 (MQ=38) cGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTCGTCTG‑TGGTTTGCAGGACTTTTCAAATTTTTGAGCGGGTAACGAGCCTCGAACTCGCGACACCGCCCtggcc > 1:1643640/1‑146 (MQ=14) aaCGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTG‑TGCTTTGCAGCACTTTTCAAATTTTGGAGCGGGAACCGAGACACGAACTCGCGACCCCGACCTTGGCAAGGTc > 3:1010816/1‑151 (MQ=255) aaCGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTG‑TGCTTTGCAGCACTTTTCAAATTTTGGAGCGGGAAACGAGAGTCGAACTAGCGACCACGACCTTGGCAAGGTc > 3:776926/1‑151 (MQ=255) gagaCTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTG‑TGCTTTGCAGCACTTTTCAAATTTTTGAGCGGGAAACGAGACTCGAACTCGCGACCCCTACGTTGGCAAGGTCGTg > 2:772406/1‑151 (MQ=255) gagaCTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTG‑TGCTTTGCAGCACTTTTCAAATTTTGGAGCGGGAAACGAGACTCGATGTCGCGACCCCGCCCTTGGCAAGGTCGTg > 3:508222/1‑151 (MQ=255) aCTCGATCTCGCGACCCCGACCTTGGTAAGGTCGTGCTCTACAAACTGAGCTATTCCGGCTTGGGTGGTTGT‑TGCTTTTCTTCACTTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGct < 4:375801/150‑1 (MQ=11) aCTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTG‑TGCTGTGCCGCACTTTTCAAATTTTGGAGCGGGAACCGCGCCTCGAACTCGCGACCCCGACCTGGGCATGCTCGTGcgc > 7:1173488/1‑149 (MQ=14) aCTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTG‑TGCGGTGCAGCAATTTTCAAATTTGGGCGGGGGAACCGCGACTCCAACACGCGACCCCGACGTGGGAATGCTCGGGctc > 5:569957/1‑151 (MQ=11) tCGAACTCGCGACCCCGACCTTCGCAAGGTCCTGCTCTACCAACTGAGCTATTCCCGCTTGGGAGGTATG‑TTCTGAGAAGCACTATTCAAATTTTTGAGCGGGAAACGACACACGAACTAGCGACCACGACCTAGGCAAGGTCGTCctct > 8:1894722/1‑150 (MQ=11) cGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTG‑TGCTTTGCAGCACTTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTAc > 5:1473123/1‑151 (MQ=38) gAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTGGGTGGTCAG‑TGCTATGCAGGACTTTTCAAATTTAGGAGAGGGAAACGAGACTCGATATCGCGACCACGAACTAGGCAAGGACGACCTCTAcc > 6:1438192/1‑151 (MQ=14) aaCTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGCGACGTAAT‑TTATATTAAGAAATTTTCAAATTTATGAACATCAAAAGAGACTCGAACTCGCGAACACGAACTTGGCAAGTTCGTGCTATAcc > 8:1718500/1‑150 (MQ=2) cTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTG‑TGGTTTGCAGGACTTTTCAAATTTTGGAGCGGGAAACGCGCCTCGAACTCGCGACACCGACCTTGGCAAGGTCGTGCGCTACGAAc > 1:1708401/1‑151 (MQ=14) cgcgCCCCGGTCTTTGTCAAGGTCTCGCGGTAACACGTGAGCTTATGCCGGGTGGGTCGTGTG‑TCCTTTGGAGCTCTTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAAc < 3:675996/149‑1 (MQ=2) gcgACCCCGACCTTGGCAAGGTCGTCCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTG‑TGATTTGGAGCAATTTTCTAATTTAGGAGGCGGAAACGCCACACGAACTCTCGACACCGACGTGCCCAAGGAACACCTCTACCAACTg > 1:859992/1‑150 (MQ=9) cgACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGTTCTG‑TTATTTGACGGAATTTTCAAATTTTTGAGAGGGTAACGCGACTCGAACTAGCGACCCAGACCTAGGGAAGGTCGTGCTCTACCAACTg > 2:935335/1‑149 (MQ=11) cgACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTGGGTGGTCTGTTGGGTTGC‑GGACTTTT‑AAATTTTGGGGGGGGTTACGGGAGGCGCAGTAGCCCCCCCGTCGTTGGCTAGGGCCGGCGCCACCAACGGAgt > 5:158705/1‑150 (MQ=0) gACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGTTATG‑TGATTTTAAGGACTTTTCAAATTTTTGAGCGGGAAACGAGACTCGAAATAGCGACCCCGACATAGGGAAGGTCGTGCTCTACCAACGGAGc > 4:17620/1‑151 (MQ=11) gACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTG‑TGGTTTGCAGCACTTTTCTAATTTTGGAGCGGGAAACGAGGCTCGAACTCGCGACACCGACCTTGGCAAGGTCGTGCTCTACCAACTGAgg > 7:1799334/1‑150 (MQ=255) gACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTG‑TGATTTGAAGAACTTTTCAAATTTTGGAGCGGGAAACGAGACTCGATCTAGCGACCACGACCTAGGCAAGGTCCTGCGCTACAAACTGAGc > 6:927849/1‑151 (MQ=14) cccGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGTTCGTCTG‑TGGTTTTCAGCAATTTTCAAATTTTGGAGCGGGAAACGAGCCTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTAt > 5:409256/1‑151 (MQ=11) cGACGTTGTCAAGGACGGGCTCTACCAACTCAGCTATTCCCCCTGGGGTGGGCTG‑TGCTTTCCTGCTCTTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTc < 3:1908903/151‑1 (MQ=11) aCCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTG‑TGATTTTAAGAAATTTTCAAATTTTGGAGAGGTAAACGAGACTCGAAATCGCGACCACTACATAGGAAAGCTAGAGCTCTAACAACTGAGATATTccc > 8:431951/1‑151 (MQ=11) ttGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGTTCTG‑TGGTTTGCAGCACTTTTCAAATTTTTGAGAGGTAAACGAGCGTCGAACTAGCGACAACGACATTGGCAAGCTCGTGCACTACAAACTGAGCTATTCCcgcc > 1:620617/1‑150 (MQ=14) ttGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTG‑TGCTTTGCAGGACTTTTCAAATTTTGGAGCGGGAAACGAGACTCGAAATCGCGACCAAGAACTTGGCAAGGTCGTGCTCTACCAACTGAGATATTccctct > 7:170957/1‑148 (MQ=14) aaGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTG‑TGCTTTGCAGGACTTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTCCTCTACCAACTGAGCTATTCCCGAGtact > 3:310110/1‑150 (MQ=255) gTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTG‑TGATTTGCAGAAATTTTCAAATTTTGGAGAGGGAAACGAGCCTCGATAACTCGACACCGACCTTCCCAAGGTCGACCTCAAAAAACTGATCTATACCAGCGTACTACtt > 3:1064610/1‑151 (MQ=9) gCTCTACCAACTGAGCTATTCCCGCTTGGTTGGTATG‑TGATTTGCAGCACTTTTCAAATTTTGGAGCGGGAAACGAGACTCGAAATCGCGACCCCGACCTTGGCAAGGTCGTGCTCAAACAACTGAGATATTCCCGCGTACTACTTAAttt > 6:546125/1‑151 (MQ=17) ctctACCAACTGAGCTATTCCCGCTTGGGTGGTCTG‑TGCTTTGCAGCACTTTTCAAATTTTGGCGCGGGAACCGAGCCTCGAACTCGCGACCCCGAGCTTGGGAAGGTCCTGCTCTACCAACTGAGCTATTCCCGCGTAGTACTTAAtttt > 2:1526456/1‑151 (MQ=17) cggttccAACTGAGATATTCCCTGTTGTTTGGTCTG‑TTCTTTTAATCAATTTTCAAATTTTGTAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTACTACTTAAttt < 8:132689/145‑1 (MQ=17) ctACCAACTGAGCTATTCCCGCTTGGGTGGTCTG‑TGCTTTGCAGCACTTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTACTACTTAATTTTGc > 1:218738/1‑151 (MQ=255) aCCAACTGAGCTATTCCCGCTTGGGTGGTATG‑TGCTTTGCAGAAATTTTCAAATTTTGGAGAGGGAAACGAGACTCGAACTCGCGACCCCGACATTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTACTACTTAATTTTGCtt > 8:770900/1‑151 (MQ=255) aaCTGAGCTATTCCCGCTTGGGTGGTCTG‑TGCTTTGCAGCACTTTTCAAATTTTGGAGCGGGAAACGCGACTCGAACTCGCGACCCCGACCTTGGGAAGGTCGTGCTCTACCAACTCAGCTATTCCCGCGGACTACTTAATTTTGCTTTCg > 4:2025273/1‑151 (MQ=255) aaCTGAGCTATTCCCGCTTGGGTGGTCTG‑TGCTTTGCAGCACTTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTACTACTTAATTTTGCTTTCg > 8:2060591/1‑151 (MQ=255) aaCTGAGCTATTCCCGCTTGGGTGGTCTG‑TGCTTTGCAGCACTTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTACTACTTAATTTTGCTTTCg > 7:2189057/1‑151 (MQ=255) tGAGCTATTCCCGCTTGGGTGGTCTG‑TGCTTTGCAGCACTTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTACTACTTAATTTTGCTTTCGTa > 3:1214345/1‑150 (MQ=255) tCCCGCTTGGGTGGTCTG‑TGCTTTGCAGCACTTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTACTACTTAATTTTGCTTTCGTAATTTTCGc > 4:1356613/1‑150 (MQ=255) cccGCTTGGGTGGTCTG‑TGCTTTGCAGCACTTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTT‑GCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTACTACTTAATTTTGCTTTCGTAATTTTCGCAtt > 4:56996/1‑151 (MQ=255) cTTGGGTGGTCTG‑TGCTTTGCAGCACTTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTACTACTTAATTTTGCTTTCGTAATTTTCGCATTTCt > 1:1588953/1‑151 (MQ=255) cTTGGGTGGTCTG‑TGCTTTGCAGCACTTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTACTACTTAATTTTGCTTTCGTAATTTTCGCATTTCt > 2:1786779/1‑151 (MQ=255) tGGGTGGTCTG‑TGCTTTGCAGCACTTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTACTACTTAATTTTGCTTTCGTAATTTTCGCATTTCTGc > 5:1560016/1‑151 (MQ=255) gggTGGTCTG‑TGCTTTGCAGCACTTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTACTACTTAATTTTGCTTTCGTAATTTTCGCATTTCTGcg > 5:1999745/1‑151 (MQ=255) ggtggtTTT‑TGGTTTTCATGAATTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTACTACTTAATTTTGCTTTCGTAATTTTCGCATTTCTGcgt < 4:1870586/151‑1 (MQ=18) gtggtCTG‑TGCTTTGCAGCACTTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTACTACTTAATTTTGCTTTCGTAATTTTCGCATTTCTGcgtc > 8:238866/1‑151 (MQ=255) ttgtCTT‑TGCTTTGAAGAAGTTTTTAATTTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTACTACTTAATTTTGCTTTCGTAATTTTCGCATTTCTGcgtc < 2:214424/148‑1 (MQ=21) ggtCTG‑TGCTTTGCAGGACTTTAGAAATTATGTCGCGGCATACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTACTACTTAATTTTGCTTTCGTAATTTTCGCATTTCTGcgtcg < 5:334815/150‑1 (MQ=21) ggtCTG‑TGCTTTGCAGCACTTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTACTACTTAATTTTGCTTTCGTAATTTTCGCATTTCTGcgtcgt > 3:2268745/1‑151 (MQ=255) gggCTTTCCAGCACTTTTCATATTTTGTCGCGGGAAACGAGCCGCTAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTACTACTTAATTTTGCTTTCGTAATTTTCGCATTTCTGCGTCGTTAc < 5:883393/147‑1 (MQ=25) tgCTTTGCAGCACTTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTACTACTTAATTTTGCTTTCGTAATTTTCGCATTTCTGCGTCGTTACggg > 6:417715/1‑151 (MQ=255) tgCTTTGCAGCACTTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTACTACTTAATTTTGCTTTCGTAATTTTCGCATTTCTGCGTCGTTACggg > 1:1836614/1‑151 (MQ=255) tgCTTTGCAGCACTTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTACTACTTAATTTTGCTTTCGTAATTTTCGCATTTCTGCGTCGTTACggg > 4:283344/1‑151 (MQ=255) gCTTTGCAGCACTTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTACTACTTAATTTTGCTTTCGTAATTTTCGCATTTCTGCGTCGTTACggg > 3:2133719/1‑150 (MQ=255) | CTACCAACTGAGCTATTCCCGCTTGGGTGGTCTGTGCCTTACAGCACTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCTTGGGTGGTCTG‑TGCTTTGCAGCACTTTTCAAATTTTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCGTACTACTTAATTTTGCTTTCGTAATTTTCGCATTTCTGCGTCGTTACGGG > DH1/4121977‑4122272 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |