| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | DH1 | = 2668875 | 124 (0.290) | 270 (0.700) | 164/268 | 0.8 | 69.1% | pseudogene (20/345 nt) | pinE | hypothetical protein |
| ? | DH1 | = 2670672 | 131 (0.340) | coding (306/789 nt) | stfP | integrase | |||||
Only 100 of 725 total aligned reads displayed.
TTCAGCGCATTACGTTGTAGATCTGTGTTCTGGTCATTTGTTGATACGCGTACATAGCCAATAAGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATGGAAATACAGT > DH1/2668726‑2669025 | ttCAGCGCATTACGTTGTAGATCTGTGTTCTGGTCATTTGTTGATACGCGTACATAGCCAATAAGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGc > 1:1580882‑M1/1‑150 (MQ=255)ggcatccggtgccagcctggagaaggggcggcacgaccagttacttaccgcacttcgcgcgctgctgttaagccgcaagaatccgtttggcgatatcaaatcggatggcactgtgcaaacggctctcgaaaaccttggtttgggagaagGa > 4:798067‑M1/150‑151 (MQ=255) cAGCGCATTACGTTGTAGATCTGTGTTCTGGTCATTTGTTGATACGCGTACATAGCCAATAAGCATGGTAAATCCCCCTGGTAAAAGCAGGAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGcgc < 5:135330‑M1/151‑4 (MQ=255) aGCGCATTACGTTGTAGATCTGTGTTCTGGTCATTTGTTGATACGCGTACATAGCCAATAAGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGctct < 5:1396768‑M1/151‑5 (MQ=255) aGCGCATTACGTTGTAGATCTGTGTTCTGGTCATTTGTTGATACGCGTACATAGCCAATAAGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGctct > 2:692971‑M1/1‑147 (MQ=255) cATTACGTTGTAGATCTGTGTTCTGGTCATTTGTTGATACGCGTACATAGCCAATAAGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATGCCATTTGCTTGTTATTTCTTCATGTTCATAAACGTTGGTTTGGGAGAAGGctctgcat > 4:1172834‑M1/1‑143 (MQ=255) tACGTTGTAGATCTGTGTTCTGGTCATTTGTTGATACGCGTACATAGCCAATAAGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGctctgcattac > 5:936049‑M1/1‑140 (MQ=255) gTTGTAGATCTGTGTTCTGGTCATTTGTTGATACGCGTACATAGCCAATAAGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGctctgcattacctg < 5:1640474‑M1/151‑15 (MQ=255) gTTGTAGATCTGTGTTCTGGTCATTTGTTGATACGCGTACATAGCCAATAAGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATg > 2:424238/1‑151 (MQ=255) tGTAGATCTGTGTTCTGGTCATTTGTTTATACGCGTACATAGCCAATAAGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATGCCATTTTCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGctctgcattacctgt < 8:1045512‑M1/150‑16 (MQ=255) gTAGATCTGTGTTCTGGTGATTTGTTTATACGCTTAGATAGCCAATAAGCTTGTTAAATCCCGCTGGTAAAAGCAGGAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGctctgcattacctgtt < 2:1654972‑M1/150‑17 (MQ=255) gagaaggggcggcacgaccagttacttaccgcacttcgcgcgctgctgttaagccgcaagaatccgttaggcgatatcaaatcggatggcactgtgcaaacggctctcgaaaaccttgctttgggagaagGAGCAAAACTCAATgcagca < 2:1529787‑M1/20‑1 (MQ=255) gATCAGTGTTCTGGTCATTTGTTGATACGCGTACATAGCCAATAAGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATgcagca > 6:311407/1‑150 (MQ=255) tCTGTGTTCTGGTCATTTGTTGATACGCGTACATAGCCAATAAGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGctctgcattacctgttggtgtc > 5:506164‑M1/1‑129 (MQ=255) gtgtTCTGGTCATTTGTTGATACGCGTACATAGCCAATAAGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGctctgcattacctgttggtgt < 5:75954‑M1/147‑22 (MQ=255) tgtTCTGGTCATTTGTTGATACGCGTACATAGCCAATAAGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCt > 8:1578575/1‑150 (MQ=255) gtTCTGGTCATTTGTTGATACGCGTACATAGCCAATAAGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggt > 3:31645‑M1/1‑124 (MQ=255) gcggcacgaccagttacttaccgcacttcgcgcgctgctgttaagccgcaagaatccgtttggcgatatcaaatcggatggcactgtgcaaacggctctcgaaaaccttggtttgggagaagGAGCAAAACTCAATGCAGCAACGGCTACa > 4:302292‑M1/123‑151 (MQ=255) tCTGGTCATTTGTTGATACGCGTACATAGCCAATAAGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttc > 6:559832‑M1/1‑122 (MQ=255) cggcacgaccagttacttaccgcacttcgcgcgctgctgttaagccgcaagaatccgtttggcgatatcaaatcggatggcactgtgcaaacggctctcgaaaaccttggtttgggagaagGAGCAAAACTCAATGCAGCAACGGCTACAt < 8:484768‑M1/30‑1 (MQ=255) ggcacgaccagttacttaccgcacttcgcgcgctgctgttaagccgcaagaatccgtttggcgatatcaaatcggatggcactgtgcaaacggctctcgaaaaccttggtttgggagaagGAGCAAAACTCAATGCAGCAACGGCTACAtt > 1:1250597‑M1/121‑151 (MQ=255) cTGGTCATTTGTTGATACGCGTACATAGCCAATAAGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACAtt > 8:1318639/1‑151 (MQ=255) cccgaccagttacttaccgcacttcgcgcgctgctgttaagccgcaagaatccgtttggcgatatcaaatcggatggcactgtgaaaacggctctcgaaacccatgggttgggagaagGAGCTAAACTCAATGCAGCACCGGCTACAtt < 2:1084726‑M1/31‑1 (MQ=255) gTCATTTGTTGATACGCGTACATAGCCAATAAGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtg > 6:1049394‑M1/1‑118 (MQ=255) cgaccagttacttaccgcacttcgcgcgctgctgttaagccgcaagaatccggttggcgatatcaaatcggatggcactgtgcaaacggctctcgaacaccttggtttgggagaagGAGCAAAACTCAATGCAGCAACGGCTACATTAGGa > 4:108192‑M1/117‑151 (MQ=255) accagttacttaccgcacttcgcgcgctgctgttaagccgcaagaatccgtttggcgatatcaaatcggatggcactgtgcaaacggctctcgaaaaccttggtttgggagaagGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACg > 6:624898‑M1/115‑151 (MQ=255) ttgttgATACGCGTACATAGCCAATAAGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGctctgcattacatgttggtgtcccggttccgtggcctt > 5:879858‑M1/1‑113 (MQ=255) gttgATACGCGTACATAGCCAATAAGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttca < 6:883377‑M1/151‑41 (MQ=255) tgATACGCGTACATAGCCAATAAGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGACACGCCTACATTAGCACGCACCgg > 1:39228/1‑151 (MQ=255) tacttaccgcacttcgcgcgctgctgttaagccgcaagaatccgtttggcgatatcaaatcggatggcactgtgcaaacggctctcgaaaaccttggtttgggagaagGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCgg < 1:475486‑M1/43‑1 (MQ=255) acttaccgcacttcgcgcgctgccgttaagccgcaagaatccgtttggcgatatcaaatcggatggcactgtgcaaacggctctcgaaaaccttggtttgggagaagGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGt > 2:1598420‑M1/108‑151 (MQ=255) cttaccgcacttcgcgcgctgctgttaagccgcaagaatccgtttggcgatatcaaatcggatggcactgtgcaaacggctctcgaaaaccttggtttgggagaagGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGtt < 5:1187402‑M1/45‑1 (MQ=255) accgcacttcgcgcgctgctgttaagccgcaagaatccgtttggcgatatcaaatcggatggcactgtgcaaacggctctcgaaaaccttggtttgggagaagGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTc > 4:392946‑M1/104‑150 (MQ=255) ccgcacttcgcgcgctgctgttaagccgcaagaatccgtttggcgatatcaaatcggatggcactgtgcaaacggctctcgaaaaccttggtttgggagaagGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCAt < 5:1125733‑M1/49‑1 (MQ=255) aCATAGCCAATAAGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgcc > 2:1011482‑M1/1‑99 (MQ=255) cgctgctgttaagccgcaagaatccgtttggcgatatcaaatcggatggcactgtgcaaacggctctcgaaaaccttggtttgggagaagGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGt > 6:186912‑M1/91‑151 (MQ=255) gctgctgttaagccgcaagaatccgtttggcgatatcaaatcggatggcactgtgcaaacggctctcgaaaaccttggtttgggagaagGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGtt > 2:1413051‑M1/90‑151 (MQ=255) aTAAGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctgg < 8:1167701‑M1/151‑62 (MQ=255) aaGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggct < 3:1423690‑M1/151‑64 (MQ=255) aaGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggct < 1:221276‑M1/151‑64 (MQ=255) gttaagccgcaagaatccgtttggcgatatcaaatcggatggcactgtgcaaacggctctcgaaaaccttggtttgggagaagGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGa > 5:659932‑M1/84‑149 (MQ=255) gttaagccgcaagaatccgtttggcgatatcaaatcggatggcactgtgcaaacggctctcgaaaaccttggtttgggagaagGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGAtt > 1:298819‑M1/84‑151 (MQ=255) tgataaaTCCCCCTGGTAAAAGCAGGAATGATGCCATTTGCTTCTTATTTCTTCATTTTCATAAACGTTGGTTTCGGAGAAGGctctgcattacctgttggtgaacctgttccgtggccttcagccactccgccaacaggctggctgaaat > 8:1364771‑M1/4‑83 (MQ=255) tAAATCCCCCTGGTAAAAGCAGGAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATtggtg > 6:1197625/1‑151 (MQ=255) agccgcaagaatccgtttggcgatatcaaatcggatggcactgtgcaaacggctctcgaaaaccttggtttgggagaagGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATtggtg < 2:788287‑M1/72‑1 (MQ=255) agccgcaagaatccgtttggcgatatcaaatcggatggcactgtgcaaacggctctagaaaaccttggtttgggagaagGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATtggtg < 2:319242‑M1/72‑1 (MQ=255) aaTCCCCCTGGTAAAAGCAGGAATGATGGCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGCAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaat < 2:1326467‑M1/151‑74 (MQ=255) cgcaagaatccgtttggcgatatcaaatcggatggcactgtgcaaacggctctcgaaaaccttggtttgggagaagGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTgctggt < 4:1012078‑M1/74‑1 (MQ=255) cccccTGGTAAAAGCAGGAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatgg < 1:596022‑M1/150‑76 (MQ=255) caagaatccgtttggcgatatcaaatcggatggcactgtgcaaacggctctcgaaaaccttggtttgggagaagGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTAtt < 1:1162264‑M1/77‑1 (MQ=255) tcccTGGTAAATGCAGGAATGATGCGATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTAGATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTAtt < 2:925950/149‑1 (MQ=255) ccccTGGTAAAAGCAGGAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtg < 5:1698113‑M1/151‑78 (MQ=255) cccTGTTAAAAGCAGTAATGTTTCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGctctgcattacctgttggtggcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgc < 4:579431‑M1/151‑79 (MQ=255) cccTGGTAAAAGCAGGAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttacgtggccttaagccactccgccaacaggctggctgaaatgcaatggtgc > 3:578138‑M1/1‑73 (MQ=255) agaatccgtttggcgatatcaaatcggatggcactgtgcaaacggctctcgaaaaccttggtttgggagaagGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGa > 3:229638‑M1/73‑151 (MQ=255) agaatccgtttggcgatatcaaatcggatggcactgtgcaaacggctctcgaaaaccttggtttgggagaagGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGa > 7:1398417‑M1/73‑151 (MQ=255) ccgtttggcgatatcaaatcggatggcactgtgcaaacggctctcgaaaaccttggtttgggagaagGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAAt < 4:1309802‑M1/84‑1 (MQ=255) tAAAAGCAGGAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatccaagggtcactcttt > 7:1032763‑M1/1‑67 (MQ=255) aaGCAGGAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttc > 6:1457209‑M1/1‑64 (MQ=255) tggcgatatcaaatcggatggcactgtgcaaacggctctcgaaaaccttggtttgggagaagGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGt < 3:1311492‑M1/88‑1 (MQ=255) aGGAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATc > 1:942345/1‑151 (MQ=255) gAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctga < 6:1651023‑M1/151‑94 (MQ=255) aaTGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaa < 4:1449156‑M1/151‑95 (MQ=255) gCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaata < 1:686692‑M1/150‑100 (MQ=255) cATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaataccc < 8:847509‑M1/151‑103 (MQ=255) ttGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGCAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGt < 6:1312879/150‑1 (MQ=255) atggcactgtgcaaacggctctcgaaaaccttggtttgggagaagGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTg > 1:1008592‑M1/46‑151 (MQ=255) tGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTgg > 3:109244/1‑151 (MQ=255) ttGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactg > 4:700202‑M1/1‑42 (MQ=255) tGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactgg > 4:973076‑M1/1‑41 (MQ=255) tATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATAATTCAGTGGGGGTGGAATGCCg > 3:1534011/1‑151 (MQ=255) tttCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaa > 8:317476‑M1/1‑36 (MQ=255) tttCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaa > 7:460509‑M1/1‑36 (MQ=255) tttCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaa > 7:1100451‑M1/1‑36 (MQ=255) ttcATTTTCATAAACGTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggctt > 7:769467‑M1/1‑32 (MQ=255) tcATTTTCATAAACGTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggct < 7:1309932‑M1/149‑119 (MQ=255) ggctctcgaaaaccttggtttgggagaagGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCa > 7:659107‑M1/30‑151 (MQ=255) cATTTTCATAAACGTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttat > 1:829554‑M1/1‑30 (MQ=255) cATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGc > 1:1456066/1‑150 (MQ=255) gctctcgaaaaccttggtttgggagaagGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCAt < 5:1551031‑M1/123‑1 (MQ=255) ttCATAAACGTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccc > 5:382226‑M1/1‑26 (MQ=255) aTAAACGTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccgaca > 3:723532‑M1/1‑23 (MQ=255) aaaaccttggtttgggagaagGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACAGGTTATCATAGGTGGTATTGAGCAATCAGTAATAATTCAGAGGGGGTGGAATGCCGCAAAAGCATCAGCctc < 1:1100164‑M1/130‑1 (MQ=255) aaaCGTTCGTTTGGGAGAAGGctctgcattacctgttgctgtcccggttccgaggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgcttattctgctgaagaatacccggaactggcaaaggcttatccgacaaa > 3:1212023‑M1/1‑21 (MQ=255) accttggtttgggagaagGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTgg < 3:923470‑M1/133‑1 (MQ=255) aCGTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccgacaaataa < 4:207013‑M1/151‑133 (MQ=255) tggtgtgggagaagGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTgggggg < 2:1197707‑M1/137‑1 (MQ=255) gggttgggagaagGAGCAAAACTCAATGCAGCAACGGCTACATTAGGCCGCACCGGTTTCATAGCTATCCCTGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCCTAAGCATCTGCCTCTggggggg < 4:909648‑M1/138‑1 (MQ=255) tttGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccgacaaataaattgcct > 2:584306‑M1/1‑12 (MQ=255) ttGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccgacaaataaattgcctg > 6:451521‑M1/1‑11 (MQ=255) tGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccgacaaataaattgcctg < 2:202044‑M1/150‑141 (MQ=255) gggAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccgacaaataaattgcctgat < 4:1533334‑M1/151‑143 (MQ=255) gggAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccgacaaataaattgcctga < 7:923893‑M1/150‑142 (MQ=255) gagaagGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATGGaaa > 7:161004‑M1/7‑151 (MQ=255) agaagGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATGGAAAt < 7:251393‑M1/146‑1 (MQ=255) agaAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctatttctgctgaagaatacccggaactggcaaaggcttatccgacaaataaattgcctgattt > 8:1632972‑M1/1‑6 (MQ=255) aacGAGCAACACTCAATGCAGCACCGCCTACATTAGGACGCACCGGCTTCATAGCTAAACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCACTGGGGGTGCAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATGGAAATAc > 6:771337‑M1/4‑151 (MQ=255) agGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTCGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGCGGATGGAAATAc < 8:599017‑M1/148‑1 (MQ=255) aGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccgacaaataaattgcctgatttacgt < 5:1048176‑M1/151‑149 (MQ=255) gctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccgacaaaaaaattgcctgatttacgggg > 3:460846‑M1/1‑1 (MQ=255) | TTCAGCGCATTACGTTGTAGATCTGTGTTCTGGTCATTTGTTGATACGCGTACATAGCCAATAAGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATGGAAATACAGT > DH1/2668726‑2669025 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |