New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? DH1 = 2668875124 (0.290)270 (0.700) 164/268 0.8 69.1% pseudogene (20/345 nt) pinE hypothetical protein
?DH1 = 2670672 131 (0.340)coding (306/789 nt) stfP integrase

Only 100 of 725 total aligned reads displayed.

TTCAGCGCATTACGTTGTAGATCTGTGTTCTGGTCATTTGTTGATACGCGTACATAGCCAATAAGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATGGAAATACAGT  >  DH1/2668726‑2669025
                                                                                                                                                     |                                                                                                                                                      
ttCAGCGCATTACGTTGTAGATCTGTGTTCTGGTCATTTGTTGATACGCGTACATAGCCAATAAGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGc                                                                                                                                                       >  1:1580882‑M1/1‑150 (MQ=255)
ggcatccggtgccagcctggagaaggggcggcacgaccagttacttaccgcacttcgcgcgctgctgttaagccgcaagaatccgtttggcgatatcaaatcggatggcactgtgcaaacggctctcgaaaaccttggtttgggagaagGa                                                                                                                                                       >  4:798067‑M1/150‑151 (MQ=255)
  cAGCGCATTACGTTGTAGATCTGTGTTCTGGTCATTTGTTGATACGCGTACATAGCCAATAAGCATGGTAAATCCCCCTGGTAAAAGCAGGAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGcgc                                                                                                                                                     <  5:135330‑M1/151‑4 (MQ=255)
   aGCGCATTACGTTGTAGATCTGTGTTCTGGTCATTTGTTGATACGCGTACATAGCCAATAAGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGctct                                                                                                                                                    <  5:1396768‑M1/151‑5 (MQ=255)
   aGCGCATTACGTTGTAGATCTGTGTTCTGGTCATTTGTTGATACGCGTACATAGCCAATAAGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGctct                                                                                                                                                    >  2:692971‑M1/1‑147 (MQ=255)
       cATTACGTTGTAGATCTGTGTTCTGGTCATTTGTTGATACGCGTACATAGCCAATAAGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATGCCATTTGCTTGTTATTTCTTCATGTTCATAAACGTTGGTTTGGGAGAAGGctctgcat                                                                                                                                                >  4:1172834‑M1/1‑143 (MQ=255)
          tACGTTGTAGATCTGTGTTCTGGTCATTTGTTGATACGCGTACATAGCCAATAAGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGctctgcattac                                                                                                                                             >  5:936049‑M1/1‑140 (MQ=255)
             gTTGTAGATCTGTGTTCTGGTCATTTGTTGATACGCGTACATAGCCAATAAGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGctctgcattacctg                                                                                                                                          <  5:1640474‑M1/151‑15 (MQ=255)
             gTTGTAGATCTGTGTTCTGGTCATTTGTTGATACGCGTACATAGCCAATAAGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATg                                                                                                                                          >  2:424238/1‑151 (MQ=255)
               tGTAGATCTGTGTTCTGGTCATTTGTTTATACGCGTACATAGCCAATAAGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATGCCATTTTCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGctctgcattacctgt                                                                                                                                         <  8:1045512‑M1/150‑16 (MQ=255)
                gTAGATCTGTGTTCTGGTGATTTGTTTATACGCTTAGATAGCCAATAAGCTTGTTAAATCCCGCTGGTAAAAGCAGGAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGctctgcattacctgtt                                                                                                                                        <  2:1654972‑M1/150‑17 (MQ=255)
                   gagaaggggcggcacgaccagttacttaccgcacttcgcgcgctgctgttaagccgcaagaatccgttaggcgatatcaaatcggatggcactgtgcaaacggctctcgaaaaccttgctttgggagaagGAGCAAAACTCAATgcagca                                                                                                                                     <  2:1529787‑M1/20‑1 (MQ=255)
                   gATCAGTGTTCTGGTCATTTGTTGATACGCGTACATAGCCAATAAGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATgcagca                                                                                                                                     >  6:311407/1‑150 (MQ=255)
                     tCTGTGTTCTGGTCATTTGTTGATACGCGTACATAGCCAATAAGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGctctgcattacctgttggtgtc                                                                                                                                  >  5:506164‑M1/1‑129 (MQ=255)
                        gtgtTCTGGTCATTTGTTGATACGCGTACATAGCCAATAAGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGctctgcattacctgttggtgt                                                                                                                                   <  5:75954‑M1/147‑22 (MQ=255)
                         tgtTCTGGTCATTTGTTGATACGCGTACATAGCCAATAAGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCt                                                                                                                               >  8:1578575/1‑150 (MQ=255)
                          gtTCTGGTCATTTGTTGATACGCGTACATAGCCAATAAGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggt                                                                                                                             >  3:31645‑M1/1‑124 (MQ=255)
                           gcggcacgaccagttacttaccgcacttcgcgcgctgctgttaagccgcaagaatccgtttggcgatatcaaatcggatggcactgtgcaaacggctctcgaaaaccttggtttgggagaagGAGCAAAACTCAATGCAGCAACGGCTACa                                                                                                                            >  4:302292‑M1/123‑151 (MQ=255)
                            tCTGGTCATTTGTTGATACGCGTACATAGCCAATAAGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttc                                                                                                                           >  6:559832‑M1/1‑122 (MQ=255)
                            cggcacgaccagttacttaccgcacttcgcgcgctgctgttaagccgcaagaatccgtttggcgatatcaaatcggatggcactgtgcaaacggctctcgaaaaccttggtttgggagaagGAGCAAAACTCAATGCAGCAACGGCTACAt                                                                                                                           <  8:484768‑M1/30‑1 (MQ=255)
                             ggcacgaccagttacttaccgcacttcgcgcgctgctgttaagccgcaagaatccgtttggcgatatcaaatcggatggcactgtgcaaacggctctcgaaaaccttggtttgggagaagGAGCAAAACTCAATGCAGCAACGGCTACAtt                                                                                                                          >  1:1250597‑M1/121‑151 (MQ=255)
                             cTGGTCATTTGTTGATACGCGTACATAGCCAATAAGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACAtt                                                                                                                          >  8:1318639/1‑151 (MQ=255)
                               cccgaccagttacttaccgcacttcgcgcgctgctgttaagccgcaagaatccgtttggcgatatcaaatcggatggcactgtgaaaacggctctcgaaacccatgggttgggagaagGAGCTAAACTCAATGCAGCACCGGCTACAtt                                                                                                                          <  2:1084726‑M1/31‑1 (MQ=255)
                                gTCATTTGTTGATACGCGTACATAGCCAATAAGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtg                                                                                                                       >  6:1049394‑M1/1‑118 (MQ=255)
                                 cgaccagttacttaccgcacttcgcgcgctgctgttaagccgcaagaatccggttggcgatatcaaatcggatggcactgtgcaaacggctctcgaacaccttggtttgggagaagGAGCAAAACTCAATGCAGCAACGGCTACATTAGGa                                                                                                                      >  4:108192‑M1/117‑151 (MQ=255)
                                   accagttacttaccgcacttcgcgcgctgctgttaagccgcaagaatccgtttggcgatatcaaatcggatggcactgtgcaaacggctctcgaaaaccttggtttgggagaagGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACg                                                                                                                    >  6:624898‑M1/115‑151 (MQ=255)
                                     ttgttgATACGCGTACATAGCCAATAAGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGctctgcattacatgttggtgtcccggttccgtggcctt                                                                                                                  >  5:879858‑M1/1‑113 (MQ=255)
                                       gttgATACGCGTACATAGCCAATAAGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttca                                                                                                                <  6:883377‑M1/151‑41 (MQ=255)
                                         tgATACGCGTACATAGCCAATAAGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGACACGCCTACATTAGCACGCACCgg                                                                                                              >  1:39228/1‑151 (MQ=255)
                                         tacttaccgcacttcgcgcgctgctgttaagccgcaagaatccgtttggcgatatcaaatcggatggcactgtgcaaacggctctcgaaaaccttggtttgggagaagGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCgg                                                                                                              <  1:475486‑M1/43‑1 (MQ=255)
                                          acttaccgcacttcgcgcgctgccgttaagccgcaagaatccgtttggcgatatcaaatcggatggcactgtgcaaacggctctcgaaaaccttggtttgggagaagGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGt                                                                                                             >  2:1598420‑M1/108‑151 (MQ=255)
                                           cttaccgcacttcgcgcgctgctgttaagccgcaagaatccgtttggcgatatcaaatcggatggcactgtgcaaacggctctcgaaaaccttggtttgggagaagGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGtt                                                                                                            <  5:1187402‑M1/45‑1 (MQ=255)
                                              accgcacttcgcgcgctgctgttaagccgcaagaatccgtttggcgatatcaaatcggatggcactgtgcaaacggctctcgaaaaccttggtttgggagaagGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTc                                                                                                          >  4:392946‑M1/104‑150 (MQ=255)
                                               ccgcacttcgcgcgctgctgttaagccgcaagaatccgtttggcgatatcaaatcggatggcactgtgcaaacggctctcgaaaaccttggtttgggagaagGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCAt                                                                                                        <  5:1125733‑M1/49‑1 (MQ=255)
                                                   aCATAGCCAATAAGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgcc                                                                                                     >  2:1011482‑M1/1‑99 (MQ=255)
                                                           cgctgctgttaagccgcaagaatccgtttggcgatatcaaatcggatggcactgtgcaaacggctctcgaaaaccttggtttgggagaagGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGt                                                                                            >  6:186912‑M1/91‑151 (MQ=255)
                                                            gctgctgttaagccgcaagaatccgtttggcgatatcaaatcggatggcactgtgcaaacggctctcgaaaaccttggtttgggagaagGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGtt                                                                                           >  2:1413051‑M1/90‑151 (MQ=255)
                                                            aTAAGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctgg                                                                                           <  8:1167701‑M1/151‑62 (MQ=255)
                                                              aaGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggct                                                                                         <  3:1423690‑M1/151‑64 (MQ=255)
                                                              aaGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggct                                                                                         <  1:221276‑M1/151‑64 (MQ=255)
                                                                  gttaagccgcaagaatccgtttggcgatatcaaatcggatggcactgtgcaaacggctctcgaaaaccttggtttgggagaagGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGa                                                                                       >  5:659932‑M1/84‑149 (MQ=255)
                                                                  gttaagccgcaagaatccgtttggcgatatcaaatcggatggcactgtgcaaacggctctcgaaaaccttggtttgggagaagGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGAtt                                                                                     >  1:298819‑M1/84‑151 (MQ=255)
                                                                   tgataaaTCCCCCTGGTAAAAGCAGGAATGATGCCATTTGCTTCTTATTTCTTCATTTTCATAAACGTTGGTTTCGGAGAAGGctctgcattacctgttggtgaacctgttccgtggccttcagccactccgccaacaggctggctgaaat                                                                                    >  8:1364771‑M1/4‑83 (MQ=255)
                                                                      tAAATCCCCCTGGTAAAAGCAGGAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATtggtg                                                                                 >  6:1197625/1‑151 (MQ=255)
                                                                      agccgcaagaatccgtttggcgatatcaaatcggatggcactgtgcaaacggctctcgaaaaccttggtttgggagaagGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATtggtg                                                                                 <  2:788287‑M1/72‑1 (MQ=255)
                                                                      agccgcaagaatccgtttggcgatatcaaatcggatggcactgtgcaaacggctctagaaaaccttggtttgggagaagGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATtggtg                                                                                 <  2:319242‑M1/72‑1 (MQ=255)
                                                                        aaTCCCCCTGGTAAAAGCAGGAATGATGGCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGCAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaat                                                                               <  2:1326467‑M1/151‑74 (MQ=255)
                                                                         cgcaagaatccgtttggcgatatcaaatcggatggcactgtgcaaacggctctcgaaaaccttggtttgggagaagGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTgctggt                                                                               <  4:1012078‑M1/74‑1 (MQ=255)
                                                                           cccccTGGTAAAAGCAGGAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatgg                                                                             <  1:596022‑M1/150‑76 (MQ=255)
                                                                           caagaatccgtttggcgatatcaaatcggatggcactgtgcaaacggctctcgaaaaccttggtttgggagaagGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTAtt                                                                            <  1:1162264‑M1/77‑1 (MQ=255)
                                                                            tcccTGGTAAATGCAGGAATGATGCGATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTAGATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTAtt                                                                            <  2:925950/149‑1 (MQ=255)
                                                                            ccccTGGTAAAAGCAGGAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtg                                                                           <  5:1698113‑M1/151‑78 (MQ=255)
                                                                             cccTGTTAAAAGCAGTAATGTTTCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGctctgcattacctgttggtggcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgc                                                                          <  4:579431‑M1/151‑79 (MQ=255)
                                                                             cccTGGTAAAAGCAGGAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttacgtggccttaagccactccgccaacaggctggctgaaatgcaatggtgc                                                                          >  3:578138‑M1/1‑73 (MQ=255)
                                                                             agaatccgtttggcgatatcaaatcggatggcactgtgcaaacggctctcgaaaaccttggtttgggagaagGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGa                                                                          >  3:229638‑M1/73‑151 (MQ=255)
                                                                             agaatccgtttggcgatatcaaatcggatggcactgtgcaaacggctctcgaaaaccttggtttgggagaagGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGa                                                                          >  7:1398417‑M1/73‑151 (MQ=255)
                                                                                  ccgtttggcgatatcaaatcggatggcactgtgcaaacggctctcgaaaaccttggtttgggagaagGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAAt                                                                     <  4:1309802‑M1/84‑1 (MQ=255)
                                                                                   tAAAAGCAGGAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatccaagggtcactcttt                                                                    >  7:1032763‑M1/1‑67 (MQ=255)
                                                                                      aaGCAGGAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttc                                                                 >  6:1457209‑M1/1‑64 (MQ=255)
                                                                                       tggcgatatcaaatcggatggcactgtgcaaacggctctcgaaaaccttggtttgggagaagGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGt                                                                 <  3:1311492‑M1/88‑1 (MQ=255)
                                                                                          aGGAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATc                                                             >  1:942345/1‑151 (MQ=255)
                                                                                            gAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctga                                                           <  6:1651023‑M1/151‑94 (MQ=255)
                                                                                             aaTGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaa                                                          <  4:1449156‑M1/151‑95 (MQ=255)
                                                                                                   gCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaata                                                     <  1:686692‑M1/150‑100 (MQ=255)
                                                                                                     cATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaataccc                                                  <  8:847509‑M1/151‑103 (MQ=255)
                                                                                                        ttGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGCAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGt                                                <  6:1312879/150‑1 (MQ=255)
                                                                                                        atggcactgtgcaaacggctctcgaaaaccttggtttgggagaagGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTg                                               >  1:1008592‑M1/46‑151 (MQ=255)
                                                                                                         tGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTgg                                              >  3:109244/1‑151 (MQ=255)
                                                                                                            ttGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactg                                           >  4:700202‑M1/1‑42 (MQ=255)
                                                                                                             tGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactgg                                          >  4:973076‑M1/1‑41 (MQ=255)
                                                                                                                tATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATAATTCAGTGGGGGTGGAATGCCg                                       >  3:1534011/1‑151 (MQ=255)
                                                                                                                  tttCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaa                                       >  8:317476‑M1/1‑36 (MQ=255)
                                                                                                                  tttCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaa                                       >  7:460509‑M1/1‑36 (MQ=255)
                                                                                                                  tttCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaa                                       >  7:1100451‑M1/1‑36 (MQ=255)
                                                                                                                      ttcATTTTCATAAACGTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggctt                                 >  7:769467‑M1/1‑32 (MQ=255)
                                                                                                                       tcATTTTCATAAACGTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggct                                  <  7:1309932‑M1/149‑119 (MQ=255)
                                                                                                                        ggctctcgaaaaccttggtttgggagaagGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCa                               >  7:659107‑M1/30‑151 (MQ=255)
                                                                                                                        cATTTTCATAAACGTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttat                               >  1:829554‑M1/1‑30 (MQ=255)
                                                                                                                        cATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGc                                >  1:1456066/1‑150 (MQ=255)
                                                                                                                         gctctcgaaaaccttggtttgggagaagGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCAt                              <  5:1551031‑M1/123‑1 (MQ=255)
                                                                                                                            ttCATAAACGTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccc                            >  5:382226‑M1/1‑26 (MQ=255)
                                                                                                                               aTAAACGTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccgaca                         >  3:723532‑M1/1‑23 (MQ=255)
                                                                                                                                aaaaccttggtttgggagaagGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACAGGTTATCATAGGTGGTATTGAGCAATCAGTAATAATTCAGAGGGGGTGGAATGCCGCAAAAGCATCAGCctc                       <  1:1100164‑M1/130‑1 (MQ=255)
                                                                                                                                 aaaCGTTCGTTTGGGAGAAGGctctgcattacctgttgctgtcccggttccgaggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgcttattctgctgaagaatacccggaactggcaaaggcttatccgacaaa                       >  3:1212023‑M1/1‑21 (MQ=255)
                                                                                                                                   accttggtttgggagaagGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTgg                    <  3:923470‑M1/133‑1 (MQ=255)
                                                                                                                                   aCGTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccgacaaataa                    <  4:207013‑M1/151‑133 (MQ=255)
                                                                                                                                       tggtgtgggagaagGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTgggggg                <  2:1197707‑M1/137‑1 (MQ=255)
                                                                                                                                        gggttgggagaagGAGCAAAACTCAATGCAGCAACGGCTACATTAGGCCGCACCGGTTTCATAGCTATCCCTGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCCTAAGCATCTGCCTCTggggggg               <  4:909648‑M1/138‑1 (MQ=255)
                                                                                                                                          tttGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccgacaaataaattgcct             >  2:584306‑M1/1‑12 (MQ=255)
                                                                                                                                           ttGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccgacaaataaattgcctg            >  6:451521‑M1/1‑11 (MQ=255)
                                                                                                                                            tGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccgacaaataaattgcctg            <  2:202044‑M1/150‑141 (MQ=255)
                                                                                                                                             gggAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccgacaaataaattgcctgat          <  4:1533334‑M1/151‑143 (MQ=255)
                                                                                                                                             gggAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccgacaaataaattgcctga           <  7:923893‑M1/150‑142 (MQ=255)
                                                                                                                                               gagaagGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATGGaaa        >  7:161004‑M1/7‑151 (MQ=255)
                                                                                                                                                agaagGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATGGAAAt       <  7:251393‑M1/146‑1 (MQ=255)
                                                                                                                                                agaAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctatttctgctgaagaatacccggaactggcaaaggcttatccgacaaataaattgcctgattt        >  8:1632972‑M1/1‑6 (MQ=255)
                                                                                                                                                  aacGAGCAACACTCAATGCAGCACCGCCTACATTAGGACGCACCGGCTTCATAGCTAAACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCACTGGGGGTGCAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATGGAAATAc     >  6:771337‑M1/4‑151 (MQ=255)
                                                                                                                                                   agGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTCGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGCGGATGGAAATAc     <  8:599017‑M1/148‑1 (MQ=255)
                                                                                                                                                   aGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccgacaaataaattgcctgatttacgt    <  5:1048176‑M1/151‑149 (MQ=255)
                                                                                                                                                     gctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccgacaaaaaaattgcctgatttacgggg  >  3:460846‑M1/1‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                      
TTCAGCGCATTACGTTGTAGATCTGTGTTCTGGTCATTTGTTGATACGCGTACATAGCCAATAAGCATGTTAAATCCCCCTGGTAAAAGCAGGAATGATGCCATTTGCTTGTTATTTCTTCATTTTCATAAACGTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGATGGAAATACAGT  >  DH1/2668726‑2669025

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.