Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*DH12,169,5480GT29.0% 434.9 / 87.7 262P671Q (CCG→CAG) rsxCelectron transporter RsxC
Reads supporting (aligned to +/- strand):  ref base G (46/138);  new base T (25/50);  total (73/189)
Fisher's exact test for biased strand distribution p-value = 2.19e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 271 total aligned reads displayed.

GCGGCAACTGCCGCTTTGCGCGGATCAACCTGTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCTTCGACGGC  >  DH1/2169398‑2169696
                                                                                                                                                      |                                                                                                                                                    
 cgGCAACTGCCGCTTTGCGCGGATCAACCTGTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCgg                                                                                                                                                     <  1:1251675/151‑1 (MQ=255)
 cgGCAACTGCCGATTTGCGCGGAGCAACCTGTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCgg                                                                                                                                                     <  2:868535/151‑1 (MQ=255)
  ggCAACTGCCGCTTTGCGCGGATCAACCTGTTCTTCTGGTACCGCATTAGCCTGGTGCTGTTCCAGCTTGCGTGCGTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGAGCAACCTGTTCTTCTGGCTCCGCATTAGCCGGt                                                                                                                                                    <  4:1656227/151‑1 (MQ=255)
   gCAACTGCCGCTTTGCGCGGATCAACCTGTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGtt                                                                                                                                                   <  5:148903/151‑1 (MQ=255)
      aCTGCCGCTGTGCGCGGATCAACCTGTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCt                                                                                                                                                <  5:731351/151‑1 (MQ=255)
         gCCGCTTTGCGCGGATCAACCTGTTGTTCTGGTACCGCATTAGCCTGTTGCTGTTCGAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGt                                                                                                                                              <  2:1053388/150‑1 (MQ=255)
           ggCTTTGCGCGGATCAACCTGTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTcc                                                                                                                                           <  1:1335332/150‑1 (MQ=255)
           cGCTTTGCGCGGATGAACCTGGTCTTCGGGGACCGCAATAGCCTGTTGCTGGGCCCGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTcc                                                                                                                                           <  3:936807/151‑1 (MQ=37)
              tttGCGCGGATCAACCTGTTCTTCTGGTTCCGCATTAGCCTGTTGCTGTTCCAGATTGCGTGCTTTGGCTCGTGCAATAGACGCTTCGACGGCCGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATGGGCCGGGGGCTGGTcgggt                                                                                                                                        >  7:1431324/1‑147 (MQ=11)
               gtGCGCGGATCAACCTGTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGt                                                                                                                                        <  7:1122238/149‑1 (MQ=255)
                tGCGCGGAGCCACCTGGTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCTGCTTGCGTGCTTTCGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGtt                                                                                                                                       <  6:11762/150‑1 (MQ=255)
                 gcgcGGATCAACCTGTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGttt                                                                                                                                      <  1:584336/150‑1 (MQ=255)
                   gcgGATCAACCTGTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCGACCTGTTCTTCTGGCTCGGCAGTGGCCGGGTggggtggcccgtgccg                                                                                                                                   >  3:634330/1‑136 (MQ=17)
                   gcgGATCAACCTGTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCAAGATTGAGGGCTTTGGAGCGTGCAATAGCGGGTTAGACCGCAGCTTTGCGCGGATCTACCGGTTGTTCTGGCTACGCATTAGCCGGTTGCTGTTCCGGTTGgcg                                                                                                                                   >  8:1193926/1‑151 (MQ=14)
                    cgGAGCAAACTGGTCTTCTGGTACCGCATTAGCCTTGTGCTGGTCCAGCTTGCTGGCTTTCGCGCGTGCAATAGCCGCTTCTACTGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTgcgc                                                                                                                                  <  3:1470900/151‑1 (MQ=25)
                      gATCAACCTGTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTAGCGCGGATCTCCCTGTTCGTCAGGCTCCGCATTAGCCTGTTGCTGTTCCAGATTgagagc                                                                                                                                >  7:1648580/1‑146 (MQ=14)
                      gATCAACCTGTTCTTCTGGGACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTgcgcgc                                                                                                                                <  5:178802/151‑1 (MQ=255)
                       aTCAACCTGTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCGGCTTCAACGGAAGCGGTGCGGGGATCGAAATGTTGTTCTGGCTCGGCATTAGCAGGTTGCTGTTCCAGttttctaga                                                                                                                                >  4:643207/1‑144 (MQ=14)
                        tCAACCTGTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCCATTCGACCGCAGCGTTCAGCACAACAACCAGGTCATCTGGGTCCGCATTACCCGGTAGCGGTTcaattatccgcgctt                                                                                                                              >  7:368946/1‑137 (MQ=12)
                         cAACCTGTTCTTCTGGTACCGCATTAGCCTGGTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCtt                                                                                                                              <  8:2622/150‑1 (MQ=255)
                           aCCTGGTCTTCGGGTACCGCATTAGCCTGTTGCTGTTCCCGCTTGCGTGCGTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTgg                                                                                                                           <  4:787683/151‑1 (MQ=255)
                              tGTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCCTGCAATAGCCGCGTCTACGGCCGCTTTGCGCGGATCGACCTGTTCTTCTGGCTCCGAATTAGCCGGTTGCTGTTCCGGGTTgggggggtgggggc                                                                                                                        >  7:773516/1‑138 (MQ=14)
                               gTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCg                                                                                                                       <  1:1351413/151‑1 (MQ=255)
                                 gattcgGGTTCCGGTTTAGCCTGTTGCTGTGCCAGCTTGCGTGCTTTTGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCTGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCgg                                                                                                                      <  3:1265268/148‑1 (MQ=255)
                                   ttttGGTAGAGCATTAGCCTGTTGCTTGTCCAGCTGTCGTGCTTTGTCGCGTTCTATAGTCGGTTCTACTGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGc                                                                                                                    <  6:1569723/147‑1 (MQ=21)
                                       gggtcctcATTATCCTGTTGCTGTTCGAGCTTTCGTGCGTTGGCGCGTGCAATAGCCGCTTCTACTGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAAt                                                                                                                 <  5:113772/142‑1 (MQ=21)
                                       ggTACGGCATTAGCCTGTTGCTGGTCGAGGTTGCGTGCTTTGGCGCGGGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATa                                                                                                                <  8:1071650/150‑1 (MQ=255)
                                       ggTACCGCATTAGCCTGTTGCTGTTCGAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAg                                                                                                               <  7:564543/151‑1 (MQ=255)
                                       ggTACCGCATTACCCTGTTGCTGTGCCTCCTTGCGTGCTTTCGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATa                                                                                                                <  6:910381/150‑1 (MQ=255)
                                        gtagatcATTAGCCTGCTGCTGTTCGTGCTTGCTTGCGTTTGCGCGTGCAATAGCCGCTTCTACTGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGc                                                                                                              <  8:1581808/145‑1 (MQ=21)
                                        gTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCGGCTTTGCGCGGATCACCGTGTTCTTCTGGCTCGGCATTATCCTGTTGCTGTTCCAGTTTGCGGGCTTTGGCGCGGGCAagagg                                                                                                              >  5:799778/1‑150 (MQ=14)
                                          aCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCGGCTTTGCGCGGCTCACCATGTTCTTCTGGCTAGGCATTAGCCTGTTGCTGTTCCAGATTGCGGGCTTTGGCTCGGGCAAGAGCgg                                                                                                            >  5:219106/1‑151 (MQ=14)
                                          aCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCGTTGGCGCGTGCAATAGCCGCGTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCg                                                                                                             <  6:1287426/150‑1 (MQ=255)
                                            cGCATTAGCCTGGTGCTGTTCGTGCTTGCGGGCTTTTGCGCGTGCAATAGCCGCGTCTACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCt                                                                                                          <  4:940782/151‑1 (MQ=25)
                                             gCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTACGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCtt                                                                                                         <  7:798531/151‑1 (MQ=255)
                                                ttAGCCTGTTGCTGTTCGAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACTGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCg                                                                                                       <  7:619176/150‑1 (MQ=255)
                                                ttAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCTAGCTGGTGATGTGGCTCGGCATAAGCGGGTTGCTGGTCCCGATTGCTCGCTTTGGCTCGGGGAATAGAGGATTCg                                                                                                       >  2:1145684/1‑150 (MQ=17)
                                                    ccTGTTGCTGTTCGAGCTTGCGTGCGTTCGCGCGGGCAATAGCCGCTGCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGAcggc                                                                                                  <  1:971574/151‑1 (MQ=255)
                                                       ggtGCTGTTCCAGCTTGCGGGCGTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGAcggcg                                                                                                 <  7:709324/147‑1 (MQ=255)
                                                       ggtGCTGTGCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACggcggc                                                                                               <  1:481562/149‑1 (MQ=255)
                                                       gTTGCTGGTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACggcggc                                                                                               <  1:378188/151‑1 (MQ=255)
                                                          gCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCttt                                                                                            <  3:1629398/151‑1 (MQ=255)
                                                          gCTGGTCCTGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACTGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCtt                                                                                             <  4:50216/150‑1 (MQ=255)
                                                           cTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCACCCTATTCTTCTGGCTACGCATTAGCCGGTTGCTGTTCACGTTTGCGCGCTTTGGCTCGGGCAATAGAGGCTTCGACGGCGGCTTTg                                                                                           >  4:358269/1‑151 (MQ=255)
                                                             gatCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTgcg                                                                                         <  7:89529/149‑1 (MQ=255)
                                                               gccgcgttGCGTGCCTGCGCGCGGGCAATAGCCGCGTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGcgcg                                                                                       <  3:1416542/145‑1 (MQ=17)
                                                                cgcgCTTGAGTGCTTTTGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCgg                                                                                      <  8:1299574/148‑1 (MQ=255)
                                                                cctgcttttttGCTTGCGCGCGTTCAATAGCCGATTCTACTGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCTGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCTGCTTCGACGGCGGCTTTGCGCgg                                                                                      <  2:325297/141‑1 (MQ=14)
                                                                ccAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGAGCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCgg                                                                                      <  3:358443/151‑1 (MQ=255)
                                                                 cAGCTTGCGGGCGTTGGCGCGTGCAATAGCCGCTGCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGCTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGa                                                                                     <  1:251051/151‑1 (MQ=255)
                                                                   ggttttttGCTTTCGCGCGTGCAATAGCCGCTTCTACTGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGGGCTTTGGCGCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATc                                                                                   <  2:1574978/144‑1 (MQ=17)
                                                                   gcttgttggCTTTTGCGCGTGCAATAGCCGCTTCTACTGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCTGTTGCTGTTCCCGTTTGCGGGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATc                                                                                   <  2:58757/143‑1 (MQ=17)
                                                                     ttGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCGGAATTGCGCGCATCGACATGTTATTCTGTCTCAGCATTAGCCTCTTGCTGTTACCGATTGCGAGCTTTGGAAAGGGCAATAGCGGCTTCGAcggcgggggggcgcggggcgg                                                                                 >  2:624965/1‑136 (MQ=2)
                                                                      tGCGTGCTTTGGCGCGGGCAATAGCCGCTGCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGa                                                                                 <  5:506888/150‑1 (MQ=255)
                                                                          tGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTGTTCTGGATCCGAAATAGCATGATCCTGTTCCAGATTGCGAGCTTTGTCTCGGGCAAAAGAGGCTTCGACCGCGGATTTGATCGGATAGACCtgt                                                                            >  8:644200/1‑151 (MQ=18)
                                                                           gCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTGTTCTGGATCCGCATTAGCCTGTTGATGTTGCCGGTTGCGAGCTTTGGCGCGGGCTATAGCGGGTTCCACGGCAGTTTTTCGGGGCTCGGCCtggg                                                                           >  3:1031701/1‑149 (MQ=255)
                                                                            cgttGGCGCGGGCAATAGCCGCGTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCtgttg                                                                          <  1:758099/149‑1 (MQ=255)
                                                                            cctgcgcgcGGGCAATAGCCGCTTCGACTGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAACCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCtgttg                                                                          <  5:1571183/146‑1 (MQ=255)
                                                                             gtttgcgcGTGCAATAGCCGCTTCCACTGCCGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCTGTTGCTGTTCCCGTTTGCGCGCTTTGGCGCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCtgttgt                                                                         <  6:1033486/147‑1 (MQ=14)
                                                                             gttcgcgcGTGCAATAGCCGCTTCGACGGCCGCGTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCTGTTGCTGTTCCCGTTTGCGCGCTTTGGCGCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCtgttgt                                                                         <  5:1080790/147‑1 (MQ=255)
                                                                             ctgagcgcGGGCAATAGCCGCGGCAACTGCCGCTTTGCGCGGATCAACCTGTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCGGCTTCGGAGGGGGAGATCCGCGGATCgggcactagt                                                                         >  6:627880/5‑142 (MQ=18)
                                                                               ttgcgcGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTgttgtt                                                                        <  4:531407/148‑1 (MQ=255)
                                                                               gcgcgcGGGCAATAGCCGCGTCTACTGCAGCGTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCTCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTgttgtt                                                                        <  3:384443/148‑1 (MQ=17)
                                                                                agcgcGGGCAATAGCCGCGGCAACTGCCGCTTTGCGCGGATCAACCTGTTCTTCTGGTACCGCATTAGACTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCCAGGCTAGACCGgatgttat                                                                      >  6:1207712/2‑149 (MQ=21)
                                                                                 gcgcGGGCAATAGCCTCGGCTACTGCCGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCTGTTGCTGTTCCCGTTTGCGCGCTTTGGCGCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTg                                                                     <  8:569824/151‑1 (MQ=11)
                                                                                      cgcaccacccccctCGACCGCACCTTTGCGCGGATCAACCTGTTCTTCTGCATCCGCATTAGCCGGTTGCTGTTCCCGGTTGCGAGCTTTGGCTCGGGCAATAGCCGCTTCGACGGATGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCg                                                                <  8:1429683/138‑1 (MQ=14)
                                                                                        cAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCTGTTGCTGTTCCAGTTTGCGCGCTTTGGCGCGGGCGATAGCGGCTTCGACGGCCGCTTTACGTGGATCGGCCTCTTGTGCTGGGTccg                                                               >  3:698612/1‑148 (MQ=11)
                                                                                         aaTAGCCGCTTCGTCAGGAGCTCTGCGCGGATCAACGTGGTCTTCTGGCTCCGCATTAGCCTGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCTACTGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCa                                                             <  3:1126451/151‑1 (MQ=17)
                                                                                         aaTAGCCGCGGCAACTGCCGCTTTGCGCGGATCAACCTGTTGTTCTGGGTCGGCATTTCGGTGTTGCTCTGGGCGGTTCGGGGCTGTCGGGCGGGGAATAGGGGGGTCGTCGTCTGCTTTGAGAGGATCCAGCTGTTGTTCTggggcgggg                                                             >  3:404855/1‑144 (MQ=2)
                                                                                           tAGCCGCTTCGACGGCAGCTTTGCGCGGATCCACCTGTTCTTCTGGCTCCGAATACGCCGGTTGGTGTGGCCGTTTGCGGGCTTTGGGTCGGTCTATAGGGTGTTCGACGGAGGATTTGCGCGGATCGCGCTGTTGTTCTAGATCggtagg                                                           >  5:837911/1‑147 (MQ=255)
                                                                                             ggcGCTGCGACTGCAGCTGTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCTGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAg                                                         <  1:1618893/149‑1 (MQ=255)
                                                                                             gCCGCTTCGACGGCAGCTTTGCGCGGATCGACCTGTTGTTATGGCTACGGATTAGACTGTTGCTGTTCACGATTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACTGAGGCTTTGCGCGGATCGACCTGTTGTTCTGGGTCgggctt                                                           >  8:336350/1‑145 (MQ=11)
                                                                                               cgcggctactgCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGGGCTTTGGCGCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGcc                                                       <  4:1431792/141‑1 (MQ=255)
                                                                                               cgcctagcagtcAGTTTCGCTCGGAGCATCCTTTCCTTCTGGTTCCGCATTAGCCTGTTGCTGTTCCAGTTTGCGTGCTTTGGCGCGTGCAATAGCGGCTTCGACGGCTGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGcc                                                       <  4:291695/140‑1 (MQ=11)
                                                                                                gcggcGACGGCAGCTTTGCGCTGAGCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCGCGTTTGCGCGCTTTGGCGCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCt                                                      <  4:1328660/147‑1 (MQ=255)
                                                                                                   tcgtcgGGAGCTTTCGGCGGATCAACCTGTGATTCTGGCTCCGCATTAGCCTGTTGCTGTTCCAGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTg                                                     <  5:1247206/149‑1 (MQ=14)
                                                                                                   tccaCGGCCGCTTGGCGCGGATCAACCTGTTCTTCTGTCTCCCCATTAGCCGGGTGCTGTTCCCGTTTGCGGGCTTTGGCGCGGGCAATAGCGGCTTCGACGGCCGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTg                                                     <  1:624432/146‑1 (MQ=14)
                                                                                                       cgccccgcctGCGCGGAGCACCCTGTTCTTCTTTTAAGGAATTCGCCTGTTGCGTTTGCTCCTTGGGCGATTTGTCTCTTTCAATAGAGGCGGCGATTGCGTTTTTGCGCGGATCTACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTg                                               <  4:1181885/142‑1 (MQ=255)
                                                                                                         gctgCTTTGCGCTGATCAACCTGTTCTTCTGGCTCCGCTTTAGCCGGTTGCTGTTCCCGTTTGCTCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGtt                                             <  5:1373840/148‑1 (MQ=255)
                                                                                                         gCAGCTTTGGGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCTGGTGCTGTTCCCGTTTGCGCGCTTTGGCGCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTg                                               <  3:519118/149‑1 (MQ=255)
                                                                                                            cctgcgcgcGGATCAACCTGTTCTTGTCGATCCGCATTAGCCTGAGGCGGTTCCCGCATGCGAGCTTAGGCGAGTGGACTAGGCTCCCCCACTGCCGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCa                                          <  1:102765/146‑1 (MQ=2)
                                                                                                                cgcgcGGCCCAACCTGTTCTTCTGGCTCCGCATTTTCCTTTTGCTGTTCCCGATTGCGGTCTTTTGCTCGGGCAATAGCCGCTTCGACGTCCTCTTTGCGCTGATGTACCTGTTCTTCTGGCTCCGCATTAGCCTGTTGCTGTTCCAGCtt                                      <  8:772708/150‑1 (MQ=2)
                                                                                                                 ccgctgagccaCCTCTTCTTCTGGCTCCTCATTAGCCTGGTGCTGTTCCCGTTTGCTGGCTTTCGCGCGGGCAATAGCCGCTTCTACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCtt                                      <  8:6102/140‑1 (MQ=14)
                                                                                                                     ggagccaCCTGGTCTTAGGGCTCGGCTTTACCCGGTTGCTGTGCCGGTTTGGGCGCCTGTGCGCGGGCAATAGCGGCTGCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTg                                 <  2:1312066/145‑1 (MQ=14)
                                                                                                                        gccaCCTGCTCTTCTGGCTCCGCAATACCCGGCTGCTGTGCCCGTTTGCTCGCGTTCGCTCGGGCAATAGCCGCTGCCACGGCGGCTTTGCGCGGATCTACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCtt                              <  8:425250/148‑1 (MQ=17)
                                                                                                                          aaCCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCCACGGCAGGTTTGCGTGGATCGGCCACTTGTTCTGGGTCGTCATTATCCTGTAGGTGTTCCAGAttcccagatttg                            >  5:468550/1‑141 (MQ=255)
                                                                                                                           aCCTGGTCTTCTGCCTCGGCATGAGCCTGGTGCTGGTCCCGTTTGCTGGCGTGCGCGCGGGCAATAGCCGCTTCTACTGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTgg                           <  7:1306155/151‑1 (MQ=14)
                                                                                                                                   ccctGCCTCCGCATTAGCCGGTTGCTGTTCTTTTTTGCGCGCTTTCGCTCGGGGAATATCCGCTTCGACGCCTGCTTTGCGCTCATCGACCTGTTTTTGTGGTTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCa                   <  6:218732/149‑1 (MQ=14)
                                                                                                                                   cccccgCTCCGCATTCGCCGGTTGCTGTTCCACTTTGCGGGCTTCGCCGCCGTCAATAGCGGCTTACACGCCGCCTTTCCGCGCAGCCCCCTGTCCTTCCGGCACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCa                   <  6:798770/146‑1 (MQ=2)
                                                                                                                                     ctGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGGTTCGACGGCGGCTTTGAGCGGATCGCGCTGTTGTTCTGGGTAGGCATTAGCCTGTTGCTGTTCCAGATTTAGAGCTTTGGCGGGGGCGAt                 >  8:341747/1‑151 (MQ=14)
                                                                                                                                       ggCTCCGCAAGAGCCTGCTGCTGTTCCCGTTTGCGCGCGTTCGCGCGGGCAATAGCCGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATa                <  1:1166229/150‑1 (MQ=14)
                                                                                                                                        gCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCACGGGCAATAGCGGCTTCGAc                                                                                                     <  6:863071/64‑1 (MQ=255)
                                                                                                                                           ccGCAAGAGCCTGGTGCTGTGCGGGTTTTCGCGCTTTGGCTCGGGCAATAGCCGCTGCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCgg            <  3:1095477/150‑1 (MQ=14)
                                                                                                                                            cgccggaGCCGGGTGCTGTTCCTGTTGACGCTCTTGCGCTCGTCCAATAGCGGCTGAGCCGCCTGCTTTGCGCTGCTCTCCGGGTCCGTCGTGCTCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCt          <  1:1470138/145‑1 (MQ=2)
                                                                                                                                             tgtttAGCCTGGTGCTGTTCGCGTTTGTGGGCTTTGGCTGGGGGAATAGCGGCGTCGTCGGCTGCTTTGCGCGGATCTACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGGTTGCGTGCTTTGGGAGGGGCATTAGCGGCt          <  4:1091881/147‑1 (MQ=14)
                                                                                                                                             gCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGTCAGTAGAGGCTGCGCAAGCGGCATAGAGAGGATCGACGTGTTGTTCTGGGTCGGCAGTAGAATGTTTATATTCAAGCTTGCGGGGGTTGGCGGGGGcggtggcgggtg         >  2:1426273/1‑140 (MQ=255)
                                                                                                                                              cactAGACGGATGCGGTTCCCGGTCCCGGGCCTTCGCGCGGGCAATAGCCGCTGCGACTGCCGCTTTGCGCGGATCTACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCTTc        <  5:628754/148‑1 (MQ=14)
                                                                                                                                               atgaGCCGCTTGCTGTTCCCGTGTGGGGCCTTAGGAGCGGGCACTAGCGCCCTCGACTGCCGCTTTGCGCGGATCCACCTGTTCTTCTGGCTCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCTTCg       <  7:479332/148‑1 (MQ=11)
                                                                                                                                               aTTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCCACCTGTTGTTCTGGATCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCTTCg       >  3:271632/1‑151 (MQ=255)
                                                                                                                                                  aGCCTGTTGCTGGTCCCGTTTGCGGGCTTTTGCTCGGGCAATAGCGGCTGCTACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCTTCGAc     <  8:1479330/150‑1 (MQ=14)
                                                                                                                                                      |                                                                                                                                                    
GCGGCAACTGCCGCTTTGCGCGGATCAACCTGTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCTTCGACGGC  >  DH1/2169398‑2169696

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑