Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*DH12,169,5680CG24.9% 403.1 / 36.5 241A664A (GCG→GCC) rsxCelectron transporter RsxC
Reads supporting (aligned to +/- strand):  ref base C (31/135);  new base G (11/44);  total (58/183)
Fisher's exact test for biased strand distribution p-value = 8.44e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 245 total aligned reads displayed.

CGGATCAACCTGTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCG  >  DH1/2169418‑2169712
                                                                                                                                                      |                                                                                                                                                
cgGAGCAAACTGGTCTTCTGGTACCGCATTAGCCTTGTGCTGGTCCAGCTTGCTGGCTTTCGCGCGTGCAATAGCCGCTTCTACTGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTgcgc                                                                                                                                                  <  3:1470900/151‑1 (MQ=25)
    tCAACCTGTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCACATTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGGATTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCGGGTTGCTGTTCCAGTTTgcgcgcgt                                                                                                                                              >  5:767027/1‑149 (MQ=17)
    gcAACCTGTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCtt                                                                                                                                              <  7:822273/150‑1 (MQ=255)
       aCCTGTTCTTCTTGTAGCTCATTAGCCTGTTGCTGTTCGAGCTTGCGTGCTTTTGCGCGTGCAATAGCCGCTTCTACTGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTgg                                                                                                                                           <  2:215984/151‑1 (MQ=25)
          tGTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCATCCGGTGCTTGTGGATGAGCATTAGCCGGTTGATGGTCCGGTTTGCGCGCTTTGGCTc                                                                                                                                        >  2:1334594/1‑151 (MQ=17)
           gTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGAGCTCGGATTAGCCCCCCTCTCCCAGGGCTTCTGCGTAAGCATTAGCCTGTTGCTGTTCCAGCTTGAGAGAATTGGCTCg                                                                                                                                       >  5:1117520/1‑151 (MQ=2)
           gTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCg                                                                                                                                       <  1:1351413/151‑1 (MQ=255)
           gTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGAGCTTTGGCGCGGGCAATAGCGGCTTCAACGGCAGGTTTGCGGGGATCACCATCGTGTGCTGCGTCCTCATTTTCCTGTTGATGTTCCTGTTTGCGGGGTTTggagcg                                                                                                                                       >  2:692208/1‑147 (MQ=2)
             gattcgGGTTCCGGTTTAGCCTGTTGCTGTGCCAGCTTGCGTGCTTTTGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCTGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCgg                                                                                                                                      <  3:1265268/148‑1 (MQ=255)
               ttttGGTAGAGCATTAGCCTGTTGCTTGTCCAGCTGTCGTGCTTTGTCGCGTTCTATAGTCGGTTCTACTGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGc                                                                                                                                    <  6:1569723/147‑1 (MQ=21)
                tctGGTACCGCATTAGCCTGTTGCTGTTCGAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGc                                                                                                                                    <  8:674444/149‑1 (MQ=255)
                tctGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGAGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCggg                                                                                                                                     <  8:620831/148‑1 (MQ=255)
                   gggtcctcATTATCCTGTTGCTGTTCGAGCTTTCGTGCGTTGGCGCGTGCAATAGCCGCTTCTACTGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAAt                                                                                                                                 <  5:113772/142‑1 (MQ=21)
                   ggTACCGCATTACCCTGTTGCTGTGCCTCCTTGCGTGCTTTCGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATa                                                                                                                                <  6:910381/150‑1 (MQ=255)
                    gttccGGATTAGCCTGTTGCTGTTCGAGCTTGCTTGCTTTGGCGCGTGCAATAGCCGCTTCTACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGc                                                                                                                              <  4:745887/148‑1 (MQ=255)
                    gTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCGGCTTTGCGCGGATCACCGTGTTCTTCTGGCTCGGCATTATCCTGTTGCTGTTCCAGTTTGCGGGCTTTGGCGCGGGCAagagg                                                                                                                              >  5:799778/1‑150 (MQ=14)
                    gTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGGATGCGAGCTTTGCATGGGGCAATAGc                                                                                                                              >  3:291881/1‑151 (MQ=17)
                      ccggccttcgcgtgtgGCGGTTCCAGCTCGCGTGCGTTGGCGCGTGCAATAGCCGCTTCGACTGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCgg                                                                                                                            <  1:1188885/139‑1 (MQ=21)
                      aCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCGGCTTTGCGCGGCTCACCATGTTCTTCTGGCTAGGCATTAGCCTGTTGCTGTTCCAGATTGCGGGCTTTGGCTCGGGCAAGAGCgg                                                                                                                            >  5:219106/1‑151 (MQ=14)
                        cGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCt                                                                                                                          <  7:356303/151‑1 (MQ=255)
                        cGCATTAGCCTGGTGCTGTTCGTGCTTGCGGGCTTTTGCGCGTGCAATAGCCGCGTCTACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCt                                                                                                                          <  4:940782/151‑1 (MQ=25)
                         gCATTAGCCTGTTGCTGTTCCCGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCtt                                                                                                                         <  6:1235521/151‑1 (MQ=255)
                         gCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCCGCTTTGCGCGGATCGACCTAGTGTTCTGGCTCCGAATTCGCCTGTGGATGGTCCTGAATGAGTGCTTTGTCGCGGGGTATAggggat                                                                                                                          >  5:1061403/1‑148 (MQ=2)
                         gCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCGACATATAGTAATCGCTGCGGATTAGCATATTGGTGTTGCCGCTTGCGAGCTGTCGCTCGTGCAAGAGACGCtt                                                                                                                         >  8:388758/1‑151 (MQ=9)
                          cATGAGCCTGTTGCTGGTCGAGCTTGCGTGCTTTGGCGCGGGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTc                                                                                                                        <  3:926950/151‑1 (MQ=255)
                             tAGCGTGTTGCTGTTCGTGTTTGTGTGCTTTTGCGCGTGCAATAGCCGCTTCTACTGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGa                                                                                                                      <  6:841222/150‑1 (MQ=21)
                             tAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCACCCTGTTCTTCTGGCTCCGGATTTTCCTGTTGCTGTTCCAGATTGCGGCCTTTGGCGCGGGGAATCGCTGCGTctcc                                                                                                                     >  2:514975/1‑148 (MQ=14)
                              aGCCTGTTGCTGTTCCTGCTTGCGTGCTTTTGCGCGGGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGAc                                                                                                                     <  4:1178824/150‑1 (MQ=255)
                              aGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGAcg                                                                                                                    <  7:581294/151‑1 (MQ=255)
                                ccTGTTGCTGTTCGAGCTTGCGTGCGTTCGCGCGGGCAATAGCCGCTGCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGAcggc                                                                                                                  <  1:971574/151‑1 (MQ=255)
                                ccTGGTGCTGTTCGAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCGTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGAcggc                                                                                                                  <  1:743507/151‑1 (MQ=255)
                                  tGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGATCCGCATTAACATCTTGATATTCACGTTTACGGGATTTGTCTCGTGCAATATCGTCTTCTAcgtcgg                                                                                                                >  8:341350/1‑151 (MQ=14)
                                   ggtGCTGTGCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACggcggc                                                                                                               <  1:481562/149‑1 (MQ=255)
                                      gCTGTTCCAGCTTGCGTGCGTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCttt                                                                                                            <  7:144804/151‑1 (MQ=255)
                                       cTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCACCCTATTCTTCTGGCTACGCATTAGCCGGTTGCTGTTCACGTTTGCGCGCTTTGGCTCGGGCAATAGAGGCTTCGACGGCGGCTTTg                                                                                                           >  4:358269/1‑151 (MQ=255)
                                          gtcctcgttttttGCTTTTGCGCGTGCAATAGCCGCTGCTACTGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCTGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTgcgc                                                                                                        <  2:982502/139‑1 (MQ=17)
                                           gccgcgttGCGTGCCTGCGCGCGGGCAATAGCCGCGTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGcgcg                                                                                                       <  3:1416542/145‑1 (MQ=17)
                                            ccAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGAGCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCgg                                                                                                      <  3:358443/151‑1 (MQ=255)
                                             ccgCTCGCGCGCTCTGCCGCGCTCAATAGCGGCTTCGACGGCCGCTTTTCGCGGATCGAGCTGTTCTTCTGGGTCCGCATTAGCCGGTTGCTGTTCCAGGTTGCGCGCTTTGGCACGGTCAATAGCGGCTTCGACGGCGGCTTTGCGCGGa                                                                                                     <  3:1092965/149‑1 (MQ=11)
                                              cgCTTGCGTGCGTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGAt                                                                                                    <  3:999523/150‑1 (MQ=255)
                                               ggttttttGCTTTCGCGCGTGCAATAGCCGCTTCTACTGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGGGCTTTGGCGCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATc                                                                                                   <  2:1574978/144‑1 (MQ=17)
                                               gcttgttggCTTTTGCGCGTGCAATAGCCGCTTCTACTGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCTGTTGCTGTTCCCGTTTGCGGGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATc                                                                                                   <  2:58757/143‑1 (MQ=17)
                                               gCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCACCCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGGTTGCGAGCTTTGGCTCGGGCAATAGCGGCTTGGCCGGCGGCGGTGCGCggcgc                                                                                                   >  7:732096/1‑148 (MQ=255)
                                                gtttggggcctgcgcgcGGGCAATAGCCGCTGCGACGGCCGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCTGTTGCTGGTCCAGGTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCg                                                                                                  <  5:859291/138‑1 (MQ=11)
                                                 ttGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGGTTTGCGAGGATCAGCATCTTGTTCTGGGTCAGCAGTAGACAGGTGCTGTTACCGATTGCGGGCGTTGGCGCGGGAAATAGCGGGTTCGAcggcggtgtttagaggatcac                                                                                                 >  2:1272545/1‑136 (MQ=255)
                                                  tGCGTGCTTTGGCGCGGGCAATAGCCGCTGCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGa                                                                                                 <  5:506888/150‑1 (MQ=255)
                                                     gTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCtg                                                                                             <  6:545933/151‑1 (MQ=255)
                                                       gcgttGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCTGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCtgtt                                                                                           <  3:393860/148‑1 (MQ=255)
                                                        cctgcgcgcGGGCAATAGCCGCTTCGACTGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAACCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCtgttg                                                                                          <  5:1571183/146‑1 (MQ=255)
                                                         gtttgcgcGTGCAATAGCCGCTTCCACTGCCGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCTGTTGCTGTTCCCGTTTGCGCGCTTTGGCGCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCtgttgt                                                                                         <  6:1033486/147‑1 (MQ=14)
                                                         gttGGCGCGGGCAATAGCCGCGGCCACGGCAGCTTTGCGCGGAGCCACCTGTTCTTCTGGCTCCGCATTAGCCTGGTGCTGTTCCCGTTTGCGCGCTTTGGCGCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCtgttgt                                                                                         <  8:437851/150‑1 (MQ=14)
                                                            ggCGCGTGCAATAGCCGCGTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCt                                                                                      <  6:978850/151‑1 (MQ=255)
                                                                  cgcaccacccccctCGACCGCACCTTTGCGCGGATCAACCTGTTCTTCTGCATCCGCATTAGCCGGTTGCTGTTCCCGGTTGCGAGCTTTGGCTCGGGCAATAGCCGCTTCGACGGATGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCg                                                                                <  8:1429683/138‑1 (MQ=14)
                                                                     aaTCGCCGCTGCTACTTCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCTGTTGCTGTTCCCGTTTGCGGGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCa                                                                             <  6:692833/151‑1 (MQ=14)
                                                                     aaTAGCCGCTTCGTCAGGAGCTCTGCGCGGATCAACGTGGTCTTCTGGCTCCGCATTAGCCTGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCTACTGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCa                                                                             <  3:1126451/151‑1 (MQ=17)
                                                                     aaTAGCCGCGGCAACTGCCGCTTTGCGCGGATCAACCTGTTGTTCTGGGTCGGCATTTCGGTGTTGCTCTGGGCGGTTCGGGGCTGTCGGGCGGGGAATAGGGGGGTCGTCGTCTGCTTTGAGAGGATCCAGCTGTTGTTCTggggcgggg                                                                             >  3:404855/1‑144 (MQ=2)
                                                                         gccgcggctactgCAGCTGTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCTGTTGCTGTTCCCGTTTGCGGGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAg                                                                         <  6:1411521/139‑1 (MQ=14)
                                                                         gCCGCTTCTACTGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTa                                                                          <  7:896338/150‑1 (MQ=255)
                                                                         gCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCTCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTa                                                                          <  5:1530831/150‑1 (MQ=255)
                                                                          ccGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCCACGGCGGCTTTGCGCGGATCGCCGTGTTGTTCTCGGTCGGCATTAGc                                                                        >  3:273215/1‑151 (MQ=255)
                                                                           cgcctagcagtcAGTTTCGCTCGGAGCATCCTTTCCTTCTGGTTCCGCATTAGCCTGTTGCTGTTCCAGTTTGCGTGCTTTGGCGCGTGCAATAGCGGCTTCGACGGCTGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGcc                                                                       <  4:291695/140‑1 (MQ=11)
                                                                           cGCTTCGACGGCAGCTTTGCGCGGATCCACCTGTTCTTCTGGATCCGCATTAGCCTGTTGCTGGTCCAGATAGCCCGCTATCGCACGGGCAATAGCGGCTTCGCCGGCGGCTTTGAGCGGATCGCCCTGTTGTGCTGGGTCGGcggtcggc                                                                       >  7:625545/1‑144 (MQ=255)
                                                                            gcggcGACGGCAGCTTTGCGCTGAGCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCGCGTTTGCGCGCTTTGGCGCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCt                                                                      <  4:1328660/147‑1 (MQ=255)
                                                                                  actgCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCTGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTg                                                                  <  1:297205/146‑1 (MQ=255)
                                                                                  aCGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCt                                                                <  5:195381/151‑1 (MQ=255)
                                                                                   cgtcAGCTTTTCGCGGATGATCTTGTTCTTCTGGCTCCTCATTATCCTGTTGCTGTTCCCGTTTTCTGGCTTTTGCGCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTg                                                               <  6:1199154/148‑1 (MQ=14)
                                                                                   cGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGGTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGCCGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGGTCGGCATTAGGCTggggggg                                                               >  7:54725/1‑145 (MQ=14)
                                                                                     gctgCTTTGCGCTGATCAACCTGTTCTTCTGGCTCCGCTTTAGCCGGTTGCTGTTCCCGTTTGCTCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGtt                                                             <  5:1373840/148‑1 (MQ=255)
                                                                                     gccgCTGTGCGCGGAGCAACCTGTTCTTCTGGCTCCGCATTAGCCTGTTGCTGTTCGCGTTTGCTGGCGTTCGCTCGGGCAATAGCGGCTTCGACGGCCGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGtt                                                             <  5:1259345/148‑1 (MQ=14)
                                                                                     gCAGCTTTGGGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCTGGTGCTGTTCCCGTTTGCGCGCTTTGGCGCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTg                                                               <  3:519118/149‑1 (MQ=255)
                                                                                        cctgcgcgcGGATCAACCTGTTCTTGTCGATCCGCATTAGCCTGAGGCGGTTCCCGCATGCGAGCTTAGGCGAGTGGACTAGGCTCCCCCACTGCCGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCa                                                          <  1:102765/146‑1 (MQ=2)
                                                                                          ggtGCGCGGAGCCACCTGTTCTTCTGGCTCGGCATGAGCCTGGTGCTGGTCCCGTTTGCGCGCTTTCGCGCGGGCAATAGCGGCGGCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGc                                                        <  1:1661106/149‑1 (MQ=14)
                                                                                           gtGCGCGGATCAACCTGTTCTTCTGTCTCGGCATTAGCCGGTTGCTGTTCCCGTTTCCGCGATTTGTGTGGTGCAATTTGGGCTTCGCCTGTCGCTTTGCGCGGATCTACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAg                                                         <  3:211564/148‑1 (MQ=17)
                                                                                            cgcgcGGCCCAACCTGTTCTTCTGGCTCCGCATTTTCCTTTTGCTGTTCCCGATTGCGGTCTTTTGCTCGGGCAATAGCCGCTTCGACGTCCTCTTTGCGCTGATGTACCTGTTCTTCTGGCTCCGCATTAGCCTGTTGCTGTTCCAGCtt                                                      <  8:772708/150‑1 (MQ=2)
                                                                                             gcgcTGATATACCTGTTTTTCTTGCTCGTCTTTATCCTGCTGCTGTTCGGGTTTGTTCGCTTTTGCGCGGGCAATAGCGGCTGCTACTGCGGCTTTGCGCGGATCTACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCtt                                                      <  4:1511931/150‑1 (MQ=2)
                                                                                              cgcgGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCAGATTGCGCGCTTTGGCTCGGGCAATAGCTGCTTCGACGGCACATTTACGAGGATCCACAACTGTTTCTGACTCGTAAGTATCCTGATGATCTTCCAGAttcc                                                    >  8:588744/1‑149 (MQ=9)
                                                                                               gcgGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCg                                                   <  7:371853/151‑1 (MQ=255)
                                                                                                  gATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACAGGTAGGACTCGCGACGGGTTAGGCTGTTGGTGGTGCGGCTTGCGTGc                                                >  4:531038/1‑151 (MQ=14)
                                                                                                      atgcTGTTCTTGTGGCTCGGCATTTGCCTGTTGCTGTTCGCGTTTGCGGGCTTGGGCGCGGGCAATAGCGGCTTCTACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTg                                            <  4:542212/148‑1 (MQ=14)
                                                                                                      aaCCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCCACGGCAGGTTTGCGTGGATCGGCCACTTGTTCTGGGTCGTCATTATCCTGTAGGTGTTCCAGAttcccagatttg                                            >  5:468550/1‑141 (MQ=255)
                                                                                                       aagtgctcttcgGGCTCGGCTTCAGCCTGCTGCTGGTCGGCTTTGTGGGCGTTCGCGCGGGCAATAGCGGCTTCTACTGCGGCTTTGCGCGGATCTACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTg                                            <  8:282326/144‑1 (MQ=2)
                                                                                                       aCCTGGTCTTCTGCCTCGGCATGAGCCTGGTGCTGGTCCCGTTTGCTGGCGTGCGCGCGGGCAATAGCCGCTTCTACTGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTgg                                           <  7:1306155/151‑1 (MQ=14)
                                                                                                          ggggggtcccgCTCCGTATCAGCCTGCTGCTGGGCGCGTTTGCTGGCCTGCGCGCGGGCAATAGCCGCGGCCACGGCCGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCAc                                        <  3:1604724/141‑1 (MQ=2)
                                                                                                            gtcttctGGCTCCGCATGAGCCTGCTGCTGTTCCCGTTTGCGCGCGTGCGCTCGGGCAATAGCGGCTGCTACGGCCGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACgg                                      <  1:1510132/150‑1 (MQ=14)
                                                                                                               ccctGCCTCCGCATTAGCCGGTTGCTGTTCTTTTTTGCGCGCTTTCGCTCGGGGAATATCCGCTTCGACGCCTGCTTTGCGCTCATCGACCTGTTTTTGTGGTTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCa                                   <  6:218732/149‑1 (MQ=14)
                                                                                                                   ggCACCGCAGTAGCCGGGTGCGCTACCCGGTTCCGCGCCTGCGCGCGGGCAATAGCGGCTTCTACGGCCGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAg                               <  1:1298256/151‑1 (MQ=14)
                                                                                                                    gCTCGGCTTTAGCCTGTTGCTGGGCGGGTTTGCGGGCTTTGGCGCGGGCAATAGCCGCTTCGACGGCCGCTTTGCGCGGATCTACCTGTTCTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGc                              <  2:1118210/151‑1 (MQ=11)
                                                                                                                    gCTCCGCATTAGCCGGCTGCTGGGCCCGTTTGCGGGCGTTGGCTCGGGCAATAGCGGCGTCCACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGc                              <  1:617310/151‑1 (MQ=17)
                                                                                                                        cGCATTAGCCTGGCGCTGGTCCCGATAGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGCCGGCCGCTTCGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCt                          <  3:643956/151‑1 (MQ=11)
                                                                                                                         ccATTAGCCGGTTGCTGGTCGCGTTTTTTGGCGTTGGCGCGGGCAATAGCCGCGTCTACGGCGGCTTTGCGCGGATCCACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCtt                         <  8:116972/150‑1 (MQ=14)
                                                                                                                          cactAGACGGATGCGGTTCCCGGTCCCGGGCCTTCGCGCGGGCAATAGCCGCTGCGACTGCCGCTTTGCGCGGATCTACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCTTc                        <  5:628754/148‑1 (MQ=14)
                                                                                                                           tatagccttctGCTGGTCGCGTTTGCTGGCTTTTGCGCGGGCAATAGCGGCGTCTACGGCCGCTTTGCGCGGATCTACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCTTc                        <  8:1041096/140‑1 (MQ=14)
                                                                                                                            ttAGCCTGTTGCTGTTCCCGGTTGCGCGCTTTGGATCGGTCAATAGCGGATTCGACGGCTGCTTTGCGCTGATCTACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCTTCg                       <  8:1646521/150‑1 (MQ=14)
                                                                                                                              aGCCTGTTGCTGGTCCCGTTTGCGGGCTTTTGCTCGGGCAATAGCGGCTGCTACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCTTCGAc                     <  8:1479330/150‑1 (MQ=14)
                                                                                                                              aGCCCGTTGCGCGTCCCGCTCGCCCGCTGTCGCGCGGGCAATAGCCGCGTCCACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCTTCGAcg                    <  7:795822/151‑1 (MQ=11)
                                                                                                                               gcctggtggtGTTCCCGGTTGCTGGCTGTGGATCGGGCTATATCCGCTTCGTCGGCTGCTTTGATCTGATCTACCTGTTCTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCTTCGAcg                    <  4:67971/141‑1 (MQ=11)
                                                                                                                                 cGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGATCCGCATTAGCCTGTTGCTGTTCCAGCGTGCGGGCGAGGGCACGGGGGATCGCgggtccgcgggcg                 >  1:1396580/1‑140 (MQ=11)
                                                                                                                                    ttGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGATCGGCATTAGCCTGTTGCTGTTCCAGCTTCCGTCCTTAGCCACGGGAAATAGCGAATTCGAAGGAGGCt              >  4:827466/1‑151 (MQ=14)
                                                                                                                                            cccGTTTGCGCGCCTGCGCTCGGGCAATAGCCGCTTCCACTGCCGCTTTGCGCGGATCCACCTGTTGTTCTGGCTCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTTGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCgg      <  6:809381/151‑1 (MQ=14)
                                                                                                                                            cccGGTTGCGGGCTGTGGCTCGTGCAATAGCCGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTGCTGTCTCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCgg      <  1:1146556/151‑1 (MQ=11)
                                                                                                                                                      |                                                                                                                                                
CGGATCAACCTGTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCG  >  DH1/2169418‑2169712

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑