Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*DH12,169,5770TG33.3% 211.0 / 77.1 236R661R (CGA→CGC) rsxCelectron transporter RsxC
Reads supporting (aligned to +/- strand):  ref base T (34/118);  new base G (14/62);  total (54/182)
Fisher's exact test for biased strand distribution p-value = 6.06e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 237 total aligned reads displayed.

TGTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTCTTCTG  >  DH1/2169428‑2169725
                                                                                                                                                     |                                                                                                                                                    
 gTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGAGCTCGGATTAGCCCCCCTCTCCCAGGGCTTCTGCGTAAGCATTAGCCTGTTGCTGTTCCAGCTTGAGAGAATTGGCTCg                                                                                                                                                    >  5:1117520/1‑151 (MQ=2)
 gTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCg                                                                                                                                                    <  1:1351413/151‑1 (MQ=255)
 gTTCTTCGGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTc                                                                                                                                                     <  5:792198/150‑1 (MQ=255)
      tctTGTACGGCATTAGCCTGCTGCTGTTCGTGCTTGTGGGCTTTGGCGCGTGCAATAGCCGCGTCTACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCTGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCggg                                                                                                                                                  <  2:204415/148‑1 (MQ=17)
      tctGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGc                                                                                                                                                 <  3:401999/149‑1 (MQ=255)
      tctGCTNCCGNATNAGCNTGTTNCTGGNCCAGCTTGCGGGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGc                                                                                                                                                 <  3:1448749/149‑1 (MQ=255)
         gggtcctcATTATCCTGTTGCTGTTCGAGCTTTCGTGCGTTGGCGCGTGCAATAGCCGCTTCTACTGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAAt                                                                                                                                              <  5:113772/142‑1 (MQ=21)
            ccggccttcgcgtgtgGCGGTTCCAGCTCGCGTGCGTTGGCGCGTGCAATAGCCGCTTCGACTGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCgg                                                                                                                                         <  1:1188885/139‑1 (MQ=21)
            aCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCGGCTTTGCGCGGCTCACCATGTTCTTCTGGCTAGGCATTAGCCTGTTGCTGTTCCAGATTGCGGGCTTTGGCTCGGGCAAGAGCgg                                                                                                                                         >  5:219106/1‑151 (MQ=14)
            aCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCGTTGGCGCGTGCAATAGCCGCGTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCg                                                                                                                                          <  6:1287426/150‑1 (MQ=255)
              cGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCt                                                                                                                                       <  7:364815/151‑1 (MQ=255)
              cGCATTAGCCTGGTGCTGTTCGTGCTTGCGGGCTTTTGCGCGTGCAATAGCCGCGTCTACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCt                                                                                                                                       <  4:940782/151‑1 (MQ=25)
              cGCATTAGCCTGGTGCTGTTCCCGCTTGCGTGCGTGCGCGCGGGCAATAGCCGCTGCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCt                                                                                                                                       <  3:1116053/151‑1 (MQ=21)
               gCATTAGCCTGTTGCTGTTCCCGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCtt                                                                                                                                      <  6:1235521/151‑1 (MQ=255)
               gCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTACGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCtt                                                                                                                                      <  7:798531/151‑1 (MQ=255)
                  ttAGCCTGTTGCTGTTCGAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACTGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCg                                                                                                                                    <  7:619176/150‑1 (MQ=255)
                    aGCCTGGTGCTGGTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACTGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGAc                                                                                                                                  <  5:686177/150‑1 (MQ=255)
                      ccTGGTGCTGTTCGAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCGTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGAcggc                                                                                                                               <  1:743507/151‑1 (MQ=255)
                          ttGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGAGGGGTCGACCGCAGCGTTGCGCGGATCACGCTGGTCTTCAGGGTGCGGATTACCGGGTTGCTGTTAAAGATTGCGCGCTTTGGCGCGGGCTATAGCgggggggcgggcggcg                                                                                                                           >  5:140969/1‑137 (MQ=2)
                            gCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCttt                                                                                                                         <  3:1629398/151‑1 (MQ=255)
                            gCTGGTCCTGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACTGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCtt                                                                                                                          <  4:50216/150‑1 (MQ=255)
                              ggTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTgc                                                                                                                       <  5:1043337/150‑1 (MQ=255)
                                  cctgcttttttGCTTGCGCGCGTTCAATAGCCGATTCTACTGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCTGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCTGCTTCGACGGCGGCTTTGCGCgg                                                                                                                   <  2:325297/141‑1 (MQ=14)
                                  ccAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTGTTCTGGCTCCGCATTAGCCGGTTGCTGTTAACGTTTGCGAGATTTGGCACGGGCAATAGCGGGTTCGCcggcgggtgtgggagg                                                                                                                   >  4:720725/1‑141 (MQ=25)
                                  ccAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGAGCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCgg                                                                                                                   <  3:358443/151‑1 (MQ=255)
                                   cAGCTTGCGGGCGTTGGCGCGTGCAATAGCCGCTGCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGCTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGa                                                                                                                  <  1:251051/151‑1 (MQ=255)
                                    aGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATAGAGCTGTTCTTCTGGCTGCTCATGTGCCGTGTGCTGTTCCTGTTTGCGATCGGTTCCTCGGGGAGAATCTGATTCGACGGCGGCTTTGGGCggct                                                                                                                 >  3:1216972/1‑149 (MQ=255)
                                     gctttagtgcgtgtgcgcGTGCAATAGCCGCTTCTACTGGAGCTTTTCGCGGAGCAACCTCTTCTTCTGGCTCCGCATTAGCCGGGTGCTGGTCCCGGTTGCTCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCTGCTTTGCGCGGATc                                                                                                                <  4:618933/137‑1 (MQ=17)
                                        tGCGTGCTTTGGCGCGGGCAATAGCCGCTGCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGa                                                                                                              <  5:506888/150‑1 (MQ=255)
                                          ggggCTTTTGCGCGGGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGAGCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCGCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCt                                                                                                           <  4:299693/148‑1 (MQ=255)
                                           gggcctttgcgcGGGCAATAGCCGCTGCCACTGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCtg                                                                                                          <  2:138607/143‑1 (MQ=17)
                                           gTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCCGCTTTCCGCGGCTCGACCTGTGCTTCGGGCTCCGCATTAGCCGCTGGCTGTGCCCGGGTGCGGGCTTGGGCACTGGCAATAGCGGCGTCGACGGCGGCTTTGGGGGGCTCgcgcgg                                                                                                          >  3:590192/1‑146 (MQ=255)
                                            tGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTGTTCTGGATCCGAAATAGCATGATCCTGTTCCAGATTGCGAGCTTTGTCTCGGGCAAAAGAGGCTTCGACCGCGGATTTGATCGGATAGACCtgt                                                                                                         >  8:644200/1‑151 (MQ=18)
                                             gCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTGTTCTGGATCCGCATTAGCCTGTTGATGTTGCCGGTTGCGAGCTTTGGCGCGGGCTATAGCGGGTTCCACGGCAGTTTTTCGGGGCTCGGCCtggg                                                                                                        >  3:1031701/1‑149 (MQ=255)
                                              cgttGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCtgttg                                                                                                       <  7:46430/149‑1 (MQ=255)
                                               gtttgcgcGTGCAATAGCCGCTTCCACTGCCGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCTGTTGCTGTTCCCGTTTGCGCGCTTTGGCGCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCtgttgt                                                                                                      <  6:1033486/147‑1 (MQ=14)
                                               gttGGCGCGGGCAATAGCCGCGGCCACGGCAGCTTTGCGCGGAGCCACCTGTTCTTCTGGCTCCGCATTAGCCTGGTGCTGTTCCCGTTTGCGCGCTTTGGCGCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCtgttgt                                                                                                      <  8:437851/150‑1 (MQ=14)
                                               ctgagcgcGGGCAATAGCCGCGGCAACTGCCGCTTTGCGCGGATCAACCTGTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCGGCTTCGGAGGGGGAGATCCGCGGATCgggcactagt                                                                                                      >  6:627880/5‑142 (MQ=18)
                                                 ttgcgcGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTgttgtt                                                                                                     <  4:531407/148‑1 (MQ=255)
                                                 gcgcgcGGGCAATAGCCGCGTCTACTGCAGCGTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCTCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTgttgtt                                                                                                     <  3:384443/148‑1 (MQ=17)
                                                   gcgcGGGCAATCGCCGCGGCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGGTTGCGCGCTTTGGCGCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTg                                                                                                  <  2:1247540/151‑1 (MQ=14)
                                                   gcgcGGGCAATAGCCTCGGCTACTGCCGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCTGTTGCTGTTCCCGTTTGCGCGCTTTGGCGCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTg                                                                                                  <  8:569824/151‑1 (MQ=11)
                                                    cgcgGGCAATAGCCGCTGCCACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCGCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTgg                                                                                                 <  7:786491/151‑1 (MQ=255)
                                                     tccgctcctcgCCGCTTCGACGGCATCTTTGCGCTCAGCAACCTGGTCTTCTGTGTCCTCATTAGCCGCTTCCTGTTCCCGCTTCCCCGCTGCGCCTCGGTCATTAGCGGCTTCGACGGCTGCTTTGCGCGGATCGACCTGTTGTTCt                                                                                                   <  6:836835/138‑1 (MQ=9)
                                                      cgTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGATCCGCATTAGCCTGTTGCTGTTCCAGATTGCGCGCTTTGGCACGGGCAATAGCGGCTTc                                                                                                                                     >  6:96262/1‑113 (MQ=11)
                                                         tcaattttcGCTTCTACTGCTGCTTTTCGGGGATCAACCTGTTCTTCTGGCTCGGTATTAGCCTGTTGCTGTTCGCGTTTTCTCGCTTTGGCTCGGGCAATAGCTGCTTCGACGGCGGCTTTGCGCGTATCGACCTGTTGTTCTGGCTCg                                                                                             <  2:611179/142‑1 (MQ=14)
                                                          cAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCTGTTGCTGTTCCAGTTTGCGCGCTTTGGCGCGGGCGATAGCGGCTTCGACGGCCGCTTTACGTGGATCGGCCTCTTGTGCTGGGTccg                                                                                            >  3:698612/1‑148 (MQ=11)
                                                             tAGCCGCTTCGACGGCAGCTTTGCGCGGATCCACCTGTTCTTCTGGCTCCGAATACGCCGGTTGGTGTGGCCGTTTGCGGGCTTTGGGTCGGTCTATAGGGTGTTCGACGGAGGATTTGCGCGGATCGCGCTGTTGTTCTAGATCggtagg                                                                                        >  5:837911/1‑147 (MQ=255)
                                                              cgcggccgcgccGGCCGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTGGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTa                                                                                       <  3:134062/140‑1 (MQ=14)
                                                              aGCCGCGTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCTGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTa                                                                                       <  7:683205/151‑1 (MQ=255)
                                                               ggcGCTGCGACTGCAGCTGTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCTGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAg                                                                                      <  1:1618893/149‑1 (MQ=255)
                                                               gCCGCTTCTACTGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTa                                                                                       <  7:896338/150‑1 (MQ=255)
                                                               gCCGCTTCGACGGCAGCTTTGCGCGGATCGACCTGTTGTTATGGCTACGGATTAGACTGTTGCTGTTCACGATTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACTGAGGCTTTGCGCGGATCGACCTGTTGTTCTGGGTCgggctt                                                                                        >  8:336350/1‑145 (MQ=11)
                                                               gCCGCTTCCACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCACCGCATTAGCCTGTTGCTGTTCCCGTTTGCGCGCGTTGGCGCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAg                                                                                      <  1:42519/151‑1 (MQ=255)
                                                               gCCGCTGCGACTGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCTGTTGCTGTTCCCGTTTGCGGGCTTTGGCGCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAg                                                                                      <  1:766868/151‑1 (MQ=255)
                                                                  gCTTCGACGGCAGCTTTGCGCGGATCCACCTGTTCTTCTGGGTACCCATTAGCCGGTTGCTGTTCCACTTAGCGCCCGTTGCCACGGGCAATAGCGGCTTCGACGGCGGCTTTGAGCGGATCGCGCTGTTGTTCTGGGTCgggcggaggcg                                                                                   >  3:506752/1‑142 (MQ=11)
                                                                  gCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGATTGCGCGCTTTGGCGCGGGCGATAGCGGCTTCAACGGCGGGTTTGCGGGGATCGGCCTGTTGGGCTggggcgccgtgtgccg                                                                                   >  1:516817/1‑137 (MQ=17)
                                                                     tcgtcgGGAGCTTTCGGCGGATCAACCTGTGATTCTGGCTCCGCATTAGCCTGTTGCTGTTCCAGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTg                                                                                  <  5:1247206/149‑1 (MQ=14)
                                                                        actgCAGCTTTGCGCGGATCAACGTGTTGTTCTGGCTCCGCATTAGCCTGGTGCTGTGCGCGTTTTCGGTCGTGTGCGCGGGCAATAGCGGCTGCTACTGCGGCTTTGCGCGGATCTACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCt                                                                             <  8:1400441/148‑1 (MQ=255)
                                                                        aCGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCt                                                                             <  5:195381/151‑1 (MQ=255)
                                                                         cgccccgcctGCGCGGAGCACCCTGTTCTTCTTTTAAGGAATTCGCCTGTTGCGTTTGCTCCTTGGGCGATTTGTCTCTTTCAATAGAGGCGGCGATTGCGTTTTTGCGCGGATCTACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTg                                                                            <  4:1181885/142‑1 (MQ=255)
                                                                         cGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGGTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGCCGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGGTCGGCATTAGGCTggggggg                                                                            >  7:54725/1‑145 (MQ=14)
                                                                          tgccgCTTTGCGCGGATCAACCTGTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCGAGATCGGAAGAGGGTATGGGAGGGTAAACGTGTAGTGCAGGCTGGGCATGAGCCTGTTGcgct                                                                           >  6:231387/5‑148 (MQ=9)
                                                                           gctgCTTTGCGCTGATCAACCTGTTCTTCTGGCTCCGCTTTAGCCGGTTGCTGTTCCCGTTTGCTCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGtt                                                                          <  5:1373840/148‑1 (MQ=255)
                                                                           gcatctacgcgcGGATCCAGCTGTTTTTCTGGCTCCGTTTTATCCTGGTGCTGGGCGGGTTTTTGGGCGTGTGCGCGGGCAATAGCCGCTGCTACGGCGGCTTTGCGCGGATCCACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGt                                                                           <  2:1112914/142‑1 (MQ=255)
                                                                            cAGCGTTCCGCGGATCAACCTGGTCTTCTGGCTCCTGATTAGCCGGTAGCTGTTCCCGTTTCCGCGCTTTGGGGCGGGCATTAGCGGCTTCGTCGGGTGCTTTGGGCGGATCAACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTc                                                                         <  7:1195253/151‑1 (MQ=14)
                                                                              cctgcgcgcGGATCAACCTGTTCTTGTCGATCCGCATTAGCCTGAGGCGGTTCCCGCATGCGAGCTTAGGCGAGTGGACTAGGCTCCCCCACTGCCGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCa                                                                       <  1:102765/146‑1 (MQ=2)
                                                                                 ttGCGCTGATCAGCCTGTTCTTCTTGCTCCGCATTAGCCTGTTGCTGGTCGCGTTTGCTGGCTTTGGCTCGGGCAATAGCGGCTTCGACTGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGc                                                                     <  7:1369236/150‑1 (MQ=14)
                                                                                 ttGCGCGGAGGTACCTGGTCTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCGGTTTGCGGGCTTTCGCGCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAg                                                                      <  5:153488/149‑1 (MQ=11)
                                                                                  cgcgcGGCCCAACCTGTTCTTCTGGCTCCGCATTTTCCTTTTGCTGTTCCCGATTGCGGTCTTTTGCTCGGGCAATAGCCGCTTCGACGTCCTCTTTGCGCTGATGTACCTGTTCTTCTGGCTCCGCATTAGCCTGTTGCTGTTCCAGCtt                                                                   <  8:772708/150‑1 (MQ=2)
                                                                                   gcgcTGATATACCTGTTTTTCTTGCTCGTCTTTATCCTGCTGCTGTTCGGGTTTGTTCGCTTTTGCGCGGGCAATAGCGGCTGCTACTGCGGCTTTGCGCGGATCTACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCtt                                                                   <  4:1511931/150‑1 (MQ=2)
                                                                                   ccgctgagccaCCTCTTCTTCTGGCTCCTCATTAGCCTGGTGCTGTTCCCGTTTGCTGGCTTTCGCGCGGGCAATAGCCGCTTCTACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCtt                                                                   <  8:6102/140‑1 (MQ=14)
                                                                                       ggagccaCCTGGTCTTAGGGCTCGGCTTTACCCGGTTGCTGTGCCGGTTTGGGCGCCTGTGCGCGGGCAATAGCGGCTGCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTg                                                              <  2:1312066/145‑1 (MQ=14)
                                                                                            aaCCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCAGATTGAGCGCTTTCGCTCCCGCAAAAGCGCCAACGACCGCGGAATAGCGCGCATCGACCTGTTGTTCTGGGTCCTCATTAGCCTGTTGCTGTTCCCGCTTGCGTGcgt                                                           >  5:473381/1‑147 (MQ=2)
                                                                                                  gtcttctGGCTCCGCATGAGCCTGCTGCTGTTCCCGTTTGCGCGCGTGCGCTCGGGCAATAGCGGCTGCTACGGCCGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACgg                                                   <  1:1510132/150‑1 (MQ=14)
                                                                                                     cccccgCTCCGCATTCGCCGGTTGCTGTTCCACTTTGCGGGCTTCGCCGCCGTCAATAGCGGCTTACACGCCGCCTTTCCGCGCAGCCCCCTGTCCTTCCGGCACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCa                                                <  6:798770/146‑1 (MQ=2)
                                                                                                       ctGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGGTTCGACGGCGGCTTTGAGCGGATCGCGCTGTTGTTCTGGGTAGGCATTAGCCTGTTGCTGTTCCAGATTTAGAGCTTTGGCGGGGGCGAt                                              >  8:341747/1‑151 (MQ=14)
                                                                                                         ggCACCGCAGTAGCCGGGTGCGCTACCCGGTTCCGCGCCTGCGCGCGGGCAATAGCGGCTTCTACGGCCGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAg                                            <  1:1298256/151‑1 (MQ=14)
                                                                                                          gCTCCGCATCAGCCGGTTGCTGTGCCCGTTTGAGCGCGTTCGCGCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGc                                           <  4:1362393/151‑1 (MQ=17)
                                                                                                           gaccccattcttgggTTGCTGGTCCGGCTTGCGAGCTTTTGCGCGGGCTATAGGCGCTTCTACTGCGGCTTTGCGCGGATCTACCTGTTGTTCTGGGTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCg                                          <  6:903587/138‑1 (MQ=11)
                                                                                                              ggCATTAGCCTGCTGCTGGTCGCGTTTTTGGGCTTGCGCGCGGGCAATAGCGGCGTCTACTGCGGCTTTGCGCGGATCTACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTCCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCt                                       <  6:1569541/150‑1 (MQ=14)
                                                                                                               tgtttAGCCTGGTGCTGTTCGCGTTTGTGGGCTTTGGCTGGGGGAATAGCGGCGTCGTCGGCTGCTTTGCGCGGATCTACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGGTTGCGTGCTTTGGGAGGGGCATTAGCGGCt                                       <  4:1091881/147‑1 (MQ=14)
                                                                                                               ccATTAGCCGGTTGCTGGTCGCGTTTTTTGGCGTTGGCGCGGGCAATAGCCGCGTCTACGGCGGCTTTGCGCGGATCCACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCtt                                      <  8:116972/150‑1 (MQ=14)
                                                                                                                gattatcgttttGCTGGGCCGGTTTGTGGGCGTTTGCGCGGGCAATAGCGGCGTCTACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCTTc                                     <  2:840196/141‑1 (MQ=14)
                                                                                                                 tatagccttctGCTGGTCGCGTTTGCTGGCTTTTGCGCGGGCAATAGCGGCGTCTACGGCCGCTTTGCGCGGATCTACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCTTc                                     <  8:1041096/140‑1 (MQ=14)
                                                                                                                 aTTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCCACCTGTTGTTCTGGATCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCTTCg                                    >  3:271632/1‑151 (MQ=255)
                                                                                                                    cggctcttGCTGGGCCCGTTTGCTGGCGTGGGCGCGGGCAATAGCCGCTTCGACTGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCTTCGAc                                  <  3:285954/144‑1 (MQ=14)
                                                                                                                    aGCCTGTTGCTGGTCCCGTTTGCGGGCTTTTGCTCGGGCAATAGCGGCTGCTACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCTTCGAc                                  <  8:1479330/150‑1 (MQ=14)
                                                                                                                      cctgctGCTGTGCGCGTTTTCGCGCGTTTGCGCGGGCAATAGCGGCTTCTACGGCCGCTTTGCGCGGATCTACCTGTTCTTCTGACTCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCTTCGAcggc                               <  6:204619/146‑1 (MQ=11)
                                                                                                                      ccgcttccgctggcggTTTGAGGGCGTTGGCGCGGGCAATAGCCGCGTCCACGGCGGCTTTGCGCGGATCTACCTGTTGTTCTGGCTCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCTTCGAcggc                               <  3:1599685/136‑1 (MQ=11)
                                                                                                                       cGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTATCCTCGTATAGACCTGTAGTTCTGGCTCGGCATTAGCATTTTGGTGTGCCCGGTTCATTGATTTAAAACGGGCAATAGCGGGTTCggagcgg                              >  6:1163748/1‑145 (MQ=9)
                                                                                                                         ggtggtGTTCGCGGTTGCGCGCTTTGGGGCTGGGATTAGCCGCTTCTACTGCGGCTTTGCGCGGATCTACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCTTCGACggcggc                            <  3:968997/146‑1 (MQ=14)
                                                                                                                          ttGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGATCGGCATTAGCCTGTTGCTGTTCCAGCTTCCGTCCTTAGCCACGGGAAATAGCGAATTCGAAGGAGGCt                           >  4:827466/1‑151 (MQ=14)
                                                                                                                                 gcccGTTTGCTGGCGTGCGCGCGGGCAATAGCCGCTTCGACGGCGGCTTTGCGCGGATCTACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCTTCGACGGCGGCTTTGcgcg                    <  1:1392637/150‑1 (MQ=14)
                                                                                                                                  cccGGTTGCGGGCTGTGGCTCGTGCAATAGCCGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTGCTGTCTCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCgg                   <  1:1146556/151‑1 (MQ=11)
                                                                                                                                    cggttgctggccgtGGCGCGGGCAATAGCCGCGGCAACGGCGGCTTTGCGCGGAGCGACCTGGTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGAt                 <  5:547385/138‑1 (MQ=14)
                                                                                                                                     ggttgagggcTTTGCGTCTGGCCAGAGCTGCTGAGACGGCTGCTCTTCGGGGATCTACCTGTTCTTCTGGCTCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCGCGGGCGATAGCTGCTTCAACGGCAGTTTTACGTGGATc                <  7:1678143/143‑1 (MQ=14)
                                                                                                                                          tgggcTTTTGCTCGGGCAATAGCCGCGTCGACGGCCGCTTTGCGCGGATCTACCTGTTGTTCTGGCTCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGAcc            <  8:1676449/147‑1 (MQ=11)
                                                                                                                                            ggcgttGGCGCGGGCAATAGCGGCTTCCACGGCCGCTTTGCGCGGATCGACCTGTTCTGCTGGCTCGGCATTAGCCTGGTGCTGTTCCAGCTTTCGGGCGTTGGCCCGGGCAATAGCGGCTTCGACGGCCGCTTTGCGCGGATCGACCTg          <  7:1530851/146‑1 (MQ=11)
                                                                                                                                             gcgggggCGCGGGCTATAGCGGCGGCGACGGCGTCTTTGCGCGGATCCACCTGTTGTTCTGGATCGTCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGtt        <  8:163800/146‑1 (MQ=11)
                                                                                                                                                     |                                                                                                                                                    
TGTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGCTCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTCTTCTG  >  DH1/2169428‑2169725

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑