Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | DH1 | 2,326,287 | 0 | G | T | 25.2% | 885.5 / 101.4 | 456 | intergenic (+207/+200) | yddM/fdnI | transcriptional regulator/formate dehydrogenase nitrate‑inducible cytochrome b556(Fdn) subunit |
Reads supporting (aligned to +/- strand): ref base G (213/116); new base T (26/85); total (243/213) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 3.42e-14 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 467 total aligned reads displayed.
GATGCGCTACGCTTATCAGGCCTACACGTTCACTGCAATCTATTGGATTTGAAGGGTTTTCATGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCCTACGTTGTCTACAATATGAAAATGACGCCTTTTACAGCGCCATTTGAAACTGATGACAAACGCAACATTGCCTGATGCGCTACGCTTATCAGGCCTACACGTTCACTGCAATCTATTGGATTTGAAGGGTTTTCATGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCCTACGTTGTCTACAATATG > DH1/2326137‑2326437 | gATGCGCTACGCTTATCAGGCCTACACGTTCACTGCAATCTATTGGATTTGAAGGGTTTTCATGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCCTACGTTGTCTACAATATGAAAATGCCGCCTTTTACAGCGCCATTTg > 4:1447737/1‑151 (MQ=11) aTGCGCTACGCTTATCAGGCCTACACGTTCACTGCAATCTATTGGATTTGAAGGGTTTTCATGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCCTACGTTGTCTACAATATGAAAATGCCGCCTTTTACAGCGCCATTTg > 4:910724/1‑150 (MQ=11) aCGCTTATCAGGCCTACACGTTCACTGCAATCTATTGGATTTGAAGGGTTTTCATGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCCTACGTTGTCTACAATATGAAAATGACGCCTTTTACAGCGCCATTTGAAACtg < 3:484490/149‑1 (MQ=37) aTCAGGCCTACACGTTCACTGCAATCTATTGGATTTGAAGGGTTTTCATGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCCTACGTTGTCTACAATATGAAAATGACGCCTTTTACAGCGCCATTTTAAACTGAAGAGaa > 1:459121/1‑150 (MQ=255) aTCAGGCCTACACGTTCACTGCAATCTATTGGATTTGAAGGGTTTTCATGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCCTACGTTGTCTACAATATGAAAATGACGCCTTTTACAGCGCCATTTGAAACTGATGACaaa < 7:1662210/151‑1 (MQ=255) aGGCCTACACGTTCACTGCAATCTATTGGATTTGAAGGGTTTTCATGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCCTACGTTGTCTACAATATGAAAATGACGCCTTTTACAGCGCCATTTGAAACTGATGACAAACGc < 5:1674061/151‑1 (MQ=255) gCCTACACTTTCACTTCATTCTATTTGATTTGATGTGTTTTCATGCCGGATAAGTCTTTCACGACGCATCCGGCATGAAAAAAGCCTTCGTTTTATTCAATATTAAAATGACCCCTTTTAAAGCGCCATTTGAAACTGATGACAAACGCa < 4:23737/150‑1 (MQ=255) gCCTACACGTTCACTGCAATCTATTTTATTTGAAGGGTTTTCATGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCCTACGTTGTCTACAATATGAAAATGACTCCTTTTACAGCGCCATTTTAAACTGATGACAAACGCaa < 4:45613/151‑1 (MQ=255) gcTACACTTTCACTGCACTCTATTGGATTTGAAGTGTTTTCATGCAGGATAAGGAGTTCACCCCTGATCCGGCATTAACAAAGCCTACGTTGTCTACAATATGAAAATGACGCCTTTTAAAGCGCCATTTGAAACTGATGACAAACGCAAc < 7:1087038/150‑1 (MQ=17) tACACGTTCACTGCAATCTATTGGATTTGAAGGGTTTTCATGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCCTACGTTGTCTACAATATGAAAATGACGCGTTTTACAGCGCCATTTGAAACTGATGCCAAACGCAAcct > 7:586300/1‑149 (MQ=255) tACACGTTCACTGCAATCTATTGGATTTGAAGGGTTTTCATGCCGGATAAGGCGTTCACGCCGCATCCGGAATGCACAACGCCTACGTGGTGTAAAATATGAAAATGACGCATTTTAACTACCGATTTGAAAATGATGACACACGCCACAt > 7:1330565/1‑151 (MQ=11) acacGTTCACTGCAATCTATTGGATTTGAAGGGTTTTCATGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCCTACGTTGTCTACAATATGAAAATGACGCCTTTTACAGCGCCATTTGAAACTGATGACAAACGCAACAt < 7:1424396/150‑1 (MQ=255) acGTTCACTGCAATCTATTGGATTTGAAGGGTTTTCATGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCCTACGTTGTCTACAATATGAAAATGACGCCTTTTACAGCGCCATTTTAAACTGATGACAAACGCAACATAGc > 5:1295224/1‑151 (MQ=255) cGTTCACTGCAATCTATTGGATTTGAAGGGTTTTCATGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCCTACGTTGTCTACAATATGAAAATGACGGCTTTTACACCGCCATTTGAAACTCATGACAAACCCAACATTGcc > 3:1328162/1‑151 (MQ=255) gTTCACAGCAATGTATTGGATATGAAGGGTTTTGATGGGGGATCAGGCGTTCACGCGGCATCCGGGATGAACAAAGCCTACGTTGTCTACAATATGAAAATGCCGCCTTTTACAGCGCCATTTTAAACTGATGACAAACGCAACATTGCCt < 1:232641/151‑1 (MQ=17) tCACTGCAATCTATTGGATTTGAAGGGTTTTCATGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCCTACGTTGTCTACAATATGAAAATGACGCCTTTTACAGCGCCATTTGAAACTGATGACAAACGCAACATTGCCTg < 3:217787/150‑1 (MQ=255) tCACTGCAATCTATTGGATTTGAAGGGTTTTCATGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCCTACGTTGTCTACAATATGAAAATGACGCCTTTTACAGCGCCATTTGAAACTGATGACAAACGCAACATTGCCTg > 7:711645/1‑150 (MQ=255) caatgtaaTCTATTGGATTTGAAGGGTTTTCATTCAGGATAAGGCTTTCAAGAGGGATCCGGAATGAACAAAGCCTACGTTGTATACAATATTAAAATGACTCCTTTTACAGCGCCATTTTAAACTGATGACAAACGCAACATTGCCTGa < 6:1123784/144‑1 (MQ=17) cACTGCATTCTATTGTCTATGACGGGTGTTGATGCCGGCAACGCCCTTCACGCCGCATCCGGCATGAACAAAGCCTACGTTGTCTACAATATCAAAATGACGCCTTTTACAGCGCCATTTGAAACTGATGACAAACGCAACATTGCCTGa < 2:1438136/150‑1 (MQ=17) gCAATCTATTGGATTTGAAGGGTTTTCATGCCGGATAAGGCGTTCACGCCGCATCCGGAATGAACAAAGACTACGTTGTCTACAATATGAAAATGACGCCTTTTACAGCGCCATTTGAAACTGATTAAAAAAGAAACATTGCCTGATgcgc > 6:149213/1‑151 (MQ=17) aaTCTATTGGATTTGAAGGGTTTTCATGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCCTACGTTGTCTACAATATGAAAATGACGCCTTTTACAGCGCCATTTGAAACTGATGACAAACGCAACATTGCCTGATGCGCTa < 2:788049/151‑1 (MQ=255) aTCTATTGGATTTGAAGGGTTTTCATGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCCTACGTTGTCTACAATATGAAAATGACGCCTTTTACAGCGCCATTTGAAACTGATGACAAACCCAACATTGCCTGATGCGCTAc > 4:751532/1‑151 (MQ=255) cTATTGGATTTGAAGGGTTTTCATGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCCTACGTTGTCTACAATATGAAAATGACGCCTTTTACAGCGCCATTTGAAACTGATGACAAACGCAACATTGCCTGATGCGCTACGc > 8:708135/1‑151 (MQ=255) tttGTATTTTAAGGGTTTTCATGCCTGATAAGGCGTTCACGCCGCATCCTGCATGAACAAAGCCTACTTTGTCTACAATATCAAAATGACGCCTTTTACAGCGCCATTTGAAACTGATGACAAACGCAACATTGCCTGATGCGCTACg < 5:513278/147‑1 (MQ=18) aTTGTATTTTAAGGGTTTTCATGCCGTATAAGTCTTTCACGACGCTTCCGGCATGAACAAAGCCTACTTTGTCTACAATATGAAAATGACTCCTTTTACAGCGCCATTTTTAACTGATGACAAACGCAACATTGCCTGATGCGCTACGCtt < 8:487171/151‑1 (MQ=18) aTTGGATTTGAAGGGTTTTCATGCCGGATAAGGCGTTCACGCCGCATCCGGCATTAACAAAGCATACGTTTTCTACAATATGAAAATGACGCCTTTTACAGCGGCTTTTGAAACTGATGACAAACGCAACATTGCCTGATGCGCTAc < 3:608138/147‑1 (MQ=255) aTTGGATTTGAAGGGTTTTCATGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCCTACGTTGTCTACAATATGAAAATGACGCCTTTTACAGCGCCATTTGAAACTGATGACAAACGCAACATTGCCTGATGCGCTACGCtt > 1:1000769/1‑151 (MQ=255) aTTGGATTTGAAGGGTTTTCATGCCGGATAAGCCGTTCACGCCGCATCCGGCATGAACAAAGCCTACGTTGTCTACAATATGAAAATGACGCCTTTTACAGCGCCATTTGAAACTGATGACAAACGCAACATTGCCTGATGCGCTACg < 5:798017/148‑1 (MQ=255) ttGGATTTGAAGGGTTTTCATGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCCTACGTTGTCTACAATATGAAAATGACGCCTTTTACAGCGCCATTTGAAACTGATGACAAACGCAACATTGCCTGATGCGCTACGCtt > 4:300152/1‑150 (MQ=255) ggATTTGAAGGGTTTTCATGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCCTACGTTGTCTACAATATGAAAATGACGCCTTTTACAGCGCCATTTGAAACTGATGACAAACGCAACATTGCCTGATGCGCTACGCTTAt < 7:329919/150‑1 (MQ=255) gATTTGAAGGGTTTTCATGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCCTACGTTGTCTACAATATGAAAATGACGCCTTTTACAGCGCCATTTGAAACTGATGACAAACGCAACATTGCCTGATGCGCTACGCTTATcc > 3:1014149/1‑150 (MQ=255) aTTTGAAGGGTTTTAATGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCCTACGTTGTCTACAATATGAAACTGACGCCTTTTACAGCGCCATTTGAAACTGATGCCAAACGCAACATTGACTGATGCGCTACGCTTAta > 8:213829/1‑148 (MQ=255) ttGAAGGGTTTTCATGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCCTACGTTGTCTACAATATGAAAATGACGCCTTTTACAGCGCCATTTGAAACTGATGACAAACGAAACATTGCCTGATGCGCTACGCTTATAAGGc > 6:272957/1‑151 (MQ=255) gAATGGTTTTCATGCCGGATAAGGCGTTCACGCCTCATCCGGCATGAACAAACGATACGTTGTCTACAATATTAAAATGACGCCTTATACAGCGCCATTTTAAACTGATGACAAACGCAACATTGCCTGATGCGCTACGCTTATCAGGcc < 1:363439/150‑1 (MQ=21) aGGGTTTTCATGCCGGATAAGTCGTTCACGCCGCATCCGGCATGAACAAAGCCTACGTTGTCTACAATATGAAAATGAATAATTTTACAGCGCCATTTGAAACTGATTAAAAACGCAACATTAACTGATTCGATACGATTATAATGACTac > 4:812362/1‑151 (MQ=17) gggTTTTAATGCCGGATAAGGCGTTCACTCCGCATCCGGCATGAACAAAGCCTACTTTGTCTACAATATTAAAATGACGCCTTTTACAGCGCCATTTGAAACTGATGACAAACGCAACATTGCCTGATGCGCTACGCTTATCAGGCCTaca < 2:680880/151‑1 (MQ=255) ggTTTTCATGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCCTACGTTGTCTACAATATGAAAATGACGCCTTTTACAGCGCCATTTGAAACTGATGACAAACGCAACATTGCCTGATGCGCTACGCTTATCAGGCCTacac > 3:906846/1‑151 (MQ=255) gTTTTCATGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCCTACGTTGTCTACAATATGAAAATGACGCCTTTTACCGCGCCATTTGAAACTGATGACAAACGCAACATTGCCTGATGCGCTACGCTTATCAGGCCTACACg > 5:101267/1‑151 (MQ=255) gTTTTCATGCCGGATAAGCCGTTCACGCCGCATCCGGCATGAACAAAGCCTACGTTGTCTACAATATGAAAATGACGCCTTTTACAGCGCCATTTGAAACTGATGACAAACGCAACATTGCCTGATGCGCTACGCTTATCAGGCCTACACg < 3:768860/151‑1 (MQ=255) ttttCATGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCCTACGTTGTCTACAATATGAAAATGACGCCTTTTACAGCGCCATTTGAAACTGATGACAAACGCAACATTGCCTGATGCGCTACGCTTATCAGGCCTACACGt > 1:1312385/1‑151 (MQ=255) tttCATGCCGGATAAGGCGTTCACGCCTCATCCGGCATGAACAAAGCCTACGTTGTCTACAATATGAAAATGACGCCTTTTACAGCGCCATTTGAAACTGATGACAAACGCAACATTGCCTGATGCGCTACGCTTATCAGGCCTACACGt < 1:1067237/150‑1 (MQ=255) ttCATGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCCTACGTTGTCTACAATATGAAAATGACGCCTTTTACAGCGCCATTTGAAACTGATGACAAACGCAACATTGCCTGATGCGCTACGCTTATCAGGCCTACACGTTc > 5:72085/1‑151 (MQ=255) cATGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCCTACGTTGTCTACAATATGAAAATGACGCCTTTTACAGCGCCATTTGAAACTGATGACCAACGCAACATTGCCTGATGCGCTACGCTTCTCAGGGCTACACGTTCAc > 5:424949/1‑151 (MQ=255) tGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCCTACGTTGTCTACAATATGAAAATGACGCCTTTTACAGCGCCATTTGAAACTGATGACAAACGCAACATTGCCTGATGCGCTACGCTTATCAGGCCTACACGTTCACTg > 7:1457078/1‑151 (MQ=255) tccGGATAAGGCGTTCACGCCTCCTCCGGCATGAACAAAGCCTACGTTGTCTACAATATGAAAATGACGCCTTTTACAGCGCCATTTTAAACTGATGACATACGCAACATTGCCTGATGCGCTACGCTTATCAGGCCTACACGTTCACTg < 3:1050576/149‑1 (MQ=255) gCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCCTACGTTGTCTACAATATGAAAATGACGCCTTTTACAGCGCCATTTGAAACTGATGACAAACGCAACATTGCCTGATGCGCTACGCTTATCAGGCCTACACGTTCACTGc > 5:1362278/1‑151 (MQ=255) ccGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCCTACGTTGTCTACAATATGAAAATGACGCCTTTTACAGCGCCATTTGAAACTGATGACAAACGCAACATTGCCTGATGCGCTACGCTTATCAGGCCTACACGTTCACTGc > 4:1315414/1‑150 (MQ=255) cGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCCTACGTTGTCTACAATATGAAAATGACGCCTTTTACAGCGCCATTTGAAACTGATGACAAACGCAACATTGCCTGATGCGCTACGCTTATCAGGCCTACACGTTCACTGCa > 2:519577/1‑150 (MQ=255) ggATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCCTACGTTGTCTACAATATGAAAATGACGCCTTTTACAGCGCCATTTGAAACTGATGACAAACGCAACATTGCCTGATGCGCTACGCTTATCAGGCCTACACGTTCACTGCAAt > 4:1128049/1‑151 (MQ=255) ggATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCCTACGTTGTCTACAATATGAAAATGACGCCTTTTACAGCGCCATTTGAAACTGATGACAAACGCAACATTGCCTGATGCGCTACGCTTATCAGGCCTACACGTTCACTGCAAt > 7:250363/1‑151 (MQ=255) gttaagtggTTCACGCCGCATCCGGCATGAACAAAGCCTACGTTGTCTACAATATGAAAATGTCTCCTTTTACAGCGCCATTTTAAACTGATGACAAACGCAACATTGCCTGATGCGCTACGCTTATCAGGCCTACACGTTCACTGCAATc < 6:925797/143‑1 (MQ=25) tAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCCTACGTTGTCTACAATATGAAAATGACGCCTTTTACAGCGCCATTTGAAACTGATGACAAACGCAACATTGCCTGATGCGCTACGCTTATCAGGCCTACACGTTCACTGCAATCt > 8:655514/1‑150 (MQ=255) aaGGCGTTGACGGCGCATCGGGCATGAACAAAGGCTACTGTGTCAACAATATTAAAATGACCCCTTTTACAGCGCCATTTTAAACTGATGACAAACGCAACATTGCCTGATGCGCTACGCTTATCAGGCCTACACGTTCACTGCAATCTAt < 7:1532177/151‑1 (MQ=18) aaGGCGTTAACGCCGCATCCGGCATGAACAAAGCCTACGTTGTCTCCAATATTAAAATGACGCCTTTTACAGCGCCATTTTAAACTGATGACAAACGCAACATTGCCTGATGCGCTACGCTTATCAGGCCTACACGTTCACTGCAATCTAt < 3:1414736/151‑1 (MQ=255) gCGTTCACGCCGCATCCGGCATGAACAAAGCCTACGTTGTATACAATATTAAAATGACTCCTTTTACAGCGCCATTTTAAACTGATGACAAACGCAACATTGCCTGATGCGCTACGCTTATCAGGCCTACACGTTCACTGCAATCTATTgg < 2:1586671/151‑1 (MQ=255) gTTCACGCCGCATCCGGCATGAACAAAGCCTACGTTGTCTACAATATGAAAATGACGCCTTTTACAGCGCCATTTGAAACTGATGACAAACGCAACATTGCCTGATGCGCTACGCTTATCAGGCCTACACGTTCACTGCAATCTATTGTAt > 4:161908/1‑151 (MQ=255) ctcctcATCGGGCATGTAGAAAGCCTTCTTTGTCTTCAATAAAAAAATGCCGCTTTTTACAGCGCCATTTTAAACTGATGACAAACGCAACATTGCCTGATGCGCTACGCTTATCAGGCCTACACGTTCACTGCAATCTATTGGAttt < 3:1577623/143‑1 (MQ=14) gccgcATCCGGCATGAACAAAGCCTACGTTGTCTACAATATGAAAATGACGCCTTTTACAGCGCCATTTGAAACTGATGACAAACGCAACATTGCCTGATGCGCTACGCTTATCAGGCCTACACGTTCACTGCAATCTATTGGATTTGa > 6:661470/1‑149 (MQ=255) gctcttccgttaTGTACAAAGCCTACTTGTTCTTCAATATTAAAATGACTCCTTTTACAGCGCCATTTATAACTGATGACAAACGCAACATTGCCTGATGCGCTACGCTTATCAGGCCTACACGTTCACTGCAATCTATTGGATTTGAAgg < 6:496722/140‑1 (MQ=14) cgcATCCGGCATGAACAAAGCCTACGTTGTCTACAATATGAAAATGACGCCTTTTACAGCGCCATTTGAAACTGATGACAAACGCAACATTGCCTGATGCGCTACGCTTATCAGGACTACACGTTCACTGCAATCTATTGGATTTGAAggg > 2:410856/1‑151 (MQ=255) atcATCAGGCATGAAAAATTCATAAGTTGTCTAGAATAATATATTTACGTCTTTTACTGCGTTATTTTATACTGATGACAAACGCAACATTGCCTGATGCGCTACGCTTATCAGGCCTACACGTTCACTGCAATCTATTGGATTTGAAggg < 8:1400869/149‑1 (MQ=14) ggCATGTACAAAGCCTTCTTTTTATACAATATTAAAATGTCTCCTTTTACAGCGCCATTTTAAACTGATGACAAACGCAACATTGCCTGATGCGCTACGCTTATCAGGCCTACACGTTCACTGCAATCTATTGGATTTGAAGGGTTTTCAt < 6:1353880/151‑1 (MQ=17) ggCATGAACAAAGCCTTCTTTGTCAACAATATGAAAATGACTCCTTTTACAGCGCCATTTTAAACTGATGACAAACGCAACATTGCCTGATGCGCTACGCTTATCAGGCCTACACGTTCACTGCAATCTATTGGATTTGAAGGGTTTTCAt < 7:918079/151‑1 (MQ=255) gCATGAACAAAGCCTACGTTGTCTACAATATGAAAATGACGACTTTTACAGCGACATTTGAAACTGATGACAAACGCAACATTGCCTGATGCGCTACGATTATCAGGCCTACACGTTCACTGCAATCTATTGGATTTGAAGGGTTTTCATg > 2:1682582/1‑151 (MQ=255) cATGAACAAAGCCTACTTTTTTTTTAATATTAAATTGTAGCATTTATAAGTACAATTTGAAAGTGATGATTTCCGTAAAATTGGCTGTTGCGATATGCTTATCAGGCCTACACGTTCACTGCAATCTATTGGATTTGAAGGGTTTTCATGc < 8:1664284/151‑1 (MQ=2) aTGAACAAAGCCTACGTTGTCTACAATATGAAAATGACGCCTTTTACAGCGCCATTTGAAACTGATGACAAACGCAACATTGCCTGATGCGCTACGCTTATCAGGCCTACACGTTCACTGCAATCTATTGGATTTGAAGGGTTTTCATGcc > 7:1198101/1‑151 (MQ=255) aaCAAAGCCTACGTTGTCTACAATATGAAAATGACGCCTTTTACAGCGCCATTTGAACCTGATGACAAACGAAACATTGCCTGATGCGCTACGCTTATCAGGCCTACACGTTCACTGCAATCTATTGGATTTGAAGGGTTTTCATGACgg > 5:894485/1‑150 (MQ=255) aCAAAGCCTACGTTGTCTACAATATGAAAATGACTCCTTTTACAGCGCCATTTTAAACTGATGACAAACGCAACATTGCCTGATGCGCTACGCTTATCAGGCCTACACGTTCACTGCAATCTATTGGATTTGAAGGGTTTTCATGCCGGAt < 8:949972/151‑1 (MQ=255) aCAAAGCCTACGTTGTCTACAATATGAAAATGACGCCTTTTACAGCGCCATTTGAAACTGATGACAAACGCAACATTGCCTGATGCGCTACGCTTATCAGGCCTACACGTTCACTGCAATCTATTGGATTTGAAGGGTTTTCATGCCGGAt > 5:1177219/1‑151 (MQ=255) aatgcttatttGTCTATAATATTAAACTTAGGTCTTTTTATGTGCCATTTTAAACTGATGACAAACGCAACATTGCCTGATGCGCTACGCTTATCAGGCCTACACGTTCACTGCAATCTATTGGATTTGAAGGGTTTTCATGCCGGATAAg < 8:78017/142‑1 (MQ=11) aatccTACCTTGCCTACAATATGAAAATCACGCCTTTTACATCTCAATTTGAAACTGATGACAATCGGATCATTGCCTGATGCGCTACGCTTATCAGGCCTACACGTTCACTGCAATCTATTGGATTTGAAGGGTTTTCATGCCGGATAAg < 2:1213489/148‑1 (MQ=17) aaGCCTTCTTTGTCTTCAATATGAAAATGTCGCCTTTTACAGCGCCATTTTAAACTGATGACAAACGGAACATTGCCTGATGCGCTACGCTTATCAGGCCTACACGTTCACTGCAATCTATTGGATTTGAAGGGTTTTCATGCCGGATaa < 4:1075391/150‑1 (MQ=17) aaGCCTACGTTGTCTACAATATGAAAATGACGCCTTTTACAGCGCCATTTTAAACTGATGAAAAACGCAACATTGCATGATGCGCTACGCTTATCAGGACTACAAGTTCACTGCAATCTATTGGATTTGAATGGTTTTCATGCCGGATa > 4:1255081/1‑149 (MQ=18) aGCCTACGTTGTCTACAATATGAAAATGACGCCTTTTACAGCGCCATTTGAAACTGATGACAAACGCAACATTGCCTGATGCGCTACGCTTATCAGGCCTACACGTTCACTGCAATCTATTGGATTTGAAGGGTTTTCATGCCGGATAAgg > 5:237612/1‑151 (MQ=255) cTACGTTGTCTACAATATGAAAATGACGCCTTTTACAGCGCCATTTGAAACTGATGACAAACGCAACATTGCCTGATGCGCTACGCTTATCAGGCCTACACGTTCACTGCAATCTATTGGATTTGAAGGGTTTTCATGCCGGATAAGGCGt > 8:396241/1‑151 (MQ=255) aCGTTGTCTACAATATGAAAATGACGCCTTTTACAGCGCCATTTGAAACTGATGACAAACGCAACATTGCCTGATGCGCTACGCTTATCAGGCCTACACGTTCACTGCAATCTATTGGATTTGAAGGGTTTTCATGCCGGATAAGGCGtt > 4:681361/1‑150 (MQ=255) gTTGTCTACAATATGAAAATGACGCCTTTTACAGCGCCATTTGAAACTGATGACAAACGCAACATTGCCTGATGCGCTACGCTTATCAGGCCTACACGTTCACTGCAATCTATTGGATTTGAAGGGTTTTCATGCCGGATAAGGCGTTCAc > 5:625757/1‑151 (MQ=255) ttGTCTACAATATGAAAATGACGCCTTTTACAGCGCCATTTGAAACTGATGACAAACGCAACATTGCCTGATGCGCTACGCTTATCAGGCCTACACGTTCACTGCAATCTATTGGATTTGAAGGGTTTTCATGCCGGATAAGGCGTTCAcg > 7:423130/1‑151 (MQ=255) gtatACAATATTAAAATGACTCCTTTTAAAGCGCCATTTTAAACTGATGACAAACGCAACATTGCCTGATGCGCTACGCTTATCAGGCCTACACGTTCACTGCAATCTATTGGATTTGAAGGGTTTTCATGCCGGATAAGGCGTTCAcgc < 2:152677/147‑1 (MQ=255) aCAATATGAAAATGACGCGTTTTACAGCGCCATTTGAAACTGATGACAAACGCAACATTGCCTGATGCGCTACGCTTATCAGGCCTACACGTTCACTGCAATCTATTGGATTTGAAGGGTTTTCATGCCGGATAAGGCGTTCAcgccg < 1:1622379/148‑1 (MQ=255) aCAATATGAAAATGACGCCTTTTACAGCGCCATTTGAAACTGATGACAAACGCAACATTGCCTGATGCGCTACGCTTATCAGGCCTACACGTTCACTGCAATCTATTGGATTTGAAGGGTTTTCATGCCGGATAAGGCGTTCAcgccg < 3:1274819/148‑1 (MQ=255) cAATATGAAAATGACGCCTTTTACAGCTCCATTTGAAACTGATGACAAACGCAACATTGCCTGATGCGCTACGCTTATCAGGCCTACACGTTCACTGCAATCTATTGGATTTGAAGGGTTTTCATGCCGGATAAGGCGTTCACGCCGCATc < 5:149462/151‑1 (MQ=255) aaTATTAAAATGACGCGTTATAAAGCGCCATTTTAAACTGATGACAAACGCAACATTGCCTGATGCGCTACGCTTATCAGGCCTACACGTTCACTGCAATCTATTGGATTTGAAGGGTTTTCATGCCGGATAAGGCGTTCACGCCGCATcc < 6:181635/151‑1 (MQ=255) tatGAAAATGACGCCTTTTACAGCGCCATTTGAAACTGATGACAAACGCAACATTGCCTGATGCGCTACGCTTATCAGGCCTACACGTTCACTGCAATCTATTGGATTTGAAGGGTTTTCATGCCGGATAAGGCGTTCACGCCGCATCCgg > 6:737778/1‑151 (MQ=255) aaaaTGCCGCCTTTTACAGCGCCATTTTAAACTGATGACAAACGCAACATTGCCTGATGCGCTACGCTTATCAGGCCTACACGTTCACTGCAATCTATTGGATTTGAAGGGTTTTCATGCCGGATAAGGCGTTCACGCCGCATCCGGCAt < 1:143112/150‑1 (MQ=255) aaaaTGACGCCTTTTACAGCGCCATTTTAAACTGATGACAAACGCAACATTGCCTGATGCGCTACGCTTATCAGGCCTACACGTTCACTGCAATCTATTGGATTTGAAGGGTTTTCATGCCGGATAAGGCGTTCACGCCGCATCCGGCAt < 2:1294234/150‑1 (MQ=255) agccGCCTTTGACACCGCCATTTCAAACAGCTGCCAACCCCAACATTCCCGGCCGCGCCACCCTTATCAGGCCTACACGTTCACTGCAATCTATTGGATTTGAAGGGTTTTCATGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACa < 3:1149222/148‑1 (MQ=11) aCGCCTATTACAGCGCCATTTGAAACTGCTGACCAACGCAACATTGCCTGATGCGCTACGCTTATCAGGCCTACACGTTCACTGCAATCTATTGGATTTGAAGGGTTTTCATGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACaaa < 5:1555107/151‑1 (MQ=255) cGCCTTTTACAGCGCCATTTGAAACTGATGACAAACGCAACATTGCCTGATGCGCTACGCTTATCAGGCCTACACGTTCACTGCAATCTATTGGATTTGAAGGGTTTTCATGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACaa > 1:644956/1‑149 (MQ=255) ccTTTTACAGCGCCATTTGAAACTGATGACAAACGCAACATTGCCTGATGCGCTACGCTTATCAGGCCTACACGTTCACTGCAATCTATTGGATTTGAAGGGTTTTCATGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGcc > 3:997510/1‑151 (MQ=39) ttttCAGCTACATTTTAAACTTATTAGAATCTCAACATTGCTTGATGCGCTACGCTTATCAGGCCTACACGTTCACTGCAATCTATTGGATTTGAAGGGTTTTCATGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCCTa < 8:582541/150‑1 (MQ=11) tttACAGCGCCATTTGAAACTGATGACAAACGCAACATTGCCTGATGCGCTACGCTTATCAGGCCTACACGTTCACTGCAATCTATTGGATTTGAAGGGTTTTCATGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCCt < 5:1640703/149‑1 (MQ=38) gcgcCATTTGAAACTGATGACAAACGCAACATTGCCTGATGCGCTACGCTTATCAGGCCTACACGTTCACTGCAATCTATTGGATTTGAAGGGTTTTCATGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCCTACGTTGTc > 2:880874/1‑151 (MQ=33) gcCATTTGAAACTGATGACAAACGCAACATTGCCTGATGCGCTACGCTTATCAGGCCTACACGTTCACTGCAATCTATTGGATTTGAAGGGTTTTCATGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCCTACGTTGTCt > 2:1085690/1‑150 (MQ=33) ccATTTTAAACTGATGACAAACGCAACATTGCCTGATGCGCTACGCTTATCAGGCCTACACGTTCACTGCAATCTATTGGATTTGAAGGGTTTTCATGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCCTACGTTGTCTAc < 1:410105/151‑1 (MQ=14) ccATTTGAAACTGATGACAAACGCAACATTGCCTGATGCGCTACGCTTATCAGTCCTACACGTTCACTGCAATCTATTGGATTTGAAGGGTTTTCATGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCCTACGTTGTCTAc < 5:123142/151‑1 (MQ=18) ccATTTGAAACTGATGACAAACGCAACATTGCCTGATGCGCTACGCTTATCAGGCCTACACGTTCACTGCAATCTATTGGATTTGAAGGGTTTTCATGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCCTACGTTGTCTAc > 6:1059740/1‑151 (MQ=33) cATTTGAAACTGATGACAAACGCAACATTGCCTGATGCGCTACGCTTATCAGGCCTACACGTTCACTGCAATCTATTGGATTTGAAGGGTTTTCATGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCCTACGTTGTCTAc > 7:536653/1‑150 (MQ=33) tttGAAACTGATGACAAACGCAACATTGCCTGATGCGCTACGCTTATCAGGCCTACACGTTCACTGCAATCTATTGGATTTGAAGGGTTTTCATGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCCTACGTTGTCTACAat > 8:1596718/1‑151 (MQ=33) tttGAAACTGATGACAAACGCAACATTGCCTGATGCGCTACGCTTATCAGGCCTACACGTTCACTGCAATCTATTGGATTTGAAGGGTTTTCATGCCGGATAAGGCGTTCACGACGCATCCGGCATGAACAAAGCCTACGTTGTCTACAat > 1:791058/1‑151 (MQ=18) | GATGCGCTACGCTTATCAGGCCTACACGTTCACTGCAATCTATTGGATTTGAAGGGTTTTCATGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCCTACGTTGTCTACAATATGAAAATGACGCCTTTTACAGCGCCATTTGAAACTGATGACAAACGCAACATTGCCTGATGCGCTACGCTTATCAGGCCTACACGTTCACTGCAATCTATTGGATTTGAAGGGTTTTCATGCCGGATAAGGCGTTCACGCCGCATCCGGCATGAACAAAGCCTACGTTGTCTACAATATG > DH1/2326137‑2326437 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |